AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene039360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039360.t1 MTR_1g050492 98.300 706 11 1 18 723 36 740 0.0 1432
MS.gene039360.t1 MTR_2g006180 30.341 323 204 10 35 351 72 379 3.45e-34 139
MS.gene039360.t1 MTR_1g032500 29.595 321 212 8 37 354 60 369 1.18e-33 134
MS.gene039360.t1 MTR_1g032500 29.595 321 212 8 37 354 60 369 5.33e-33 134
MS.gene039360.t1 MTR_7g089260 88.235 34 4 0 690 723 1066 1099 1.22e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene039360.t1 AT5G23880 76.587 709 158 4 18 723 36 739 0.0 1130
MS.gene039360.t1 AT1G61010 28.527 319 217 5 35 351 72 381 2.00e-35 143
MS.gene039360.t1 AT1G61010 28.527 319 217 5 35 351 72 381 2.00e-35 143
MS.gene039360.t1 AT1G61010 28.527 319 217 5 35 351 72 381 2.00e-35 143
MS.gene039360.t1 AT1G61010 28.527 319 217 5 35 351 72 381 2.00e-35 143
MS.gene039360.t1 AT1G61010 28.527 319 217 5 35 351 72 381 2.00e-35 143
MS.gene039360.t1 AT2G01730 27.190 331 227 7 25 352 48 367 1.89e-29 124
MS.gene039360.t1 AT2G01730 28.013 307 207 7 49 352 3 298 3.72e-28 120

Find 164 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAATAGTCTCTTCAATT+TGG 0.161163 6.3:-43613340 None:intergenic
CCCTCCTTCAACCCCTTTCC+AGG 0.179083 6.3:+43604980 MS.gene039360:CDS
CTTTCGCTTCTCCCCGTTTC+CGG 0.206479 6.3:+43613666 MS.gene039360:CDS
CTCTGATTTATGTGCTTATA+AGG 0.207195 6.3:+43613367 MS.gene039360:CDS
TCTCAGAATCATCATCTTTC+AGG 0.216936 6.3:+43605455 MS.gene039360:CDS
ATATCAGAATGGGATGATTT+TGG 0.237943 6.3:+43609024 MS.gene039360:CDS
ATCAATAGTCTCTTCAATTT+GGG 0.246763 6.3:-43613339 None:intergenic
ACATACTGCTGGACATCTTT+TGG 0.258251 6.3:+43605575 MS.gene039360:CDS
CGTCAAAAGGACAAAGAATT+TGG 0.259609 6.3:+43605857 MS.gene039360:CDS
TCCAGATGATTATGTAATTA+AGG 0.261071 6.3:+43609059 MS.gene039360:CDS
TTCTGATATATTCTCATAAC+AGG 0.268705 6.3:-43609010 None:intergenic
CATTTGAACGGAACTGTTCT+AGG 0.271657 6.3:+43605767 MS.gene039360:CDS
AAAAGATCCATACCAGCTTT+AGG 0.290471 6.3:-43610600 None:intergenic
ATATCTTAAAGAAGACTCTA+AGG 0.311429 6.3:+43606108 MS.gene039360:CDS
TAGGTAGGTGGTGATTTAAA+TGG 0.321579 6.3:+43609542 MS.gene039360:intron
ACAGTGACTTTGACAGCTTT+TGG 0.321869 6.3:-43608240 None:intergenic
AAAGATCCATACCAGCTTTA+GGG 0.322007 6.3:-43610599 None:intergenic
TGACACTGCTGGACGGATAT+TGG 0.324027 6.3:+43606157 MS.gene039360:CDS
TCTAGCATCCATGGCTAGTT+TGG 0.326457 6.3:+43607091 MS.gene039360:CDS
TCTTGTTGGTGATTTGAAAT+TGG 0.334812 6.3:+43613713 MS.gene039360:CDS
TTTAAACAGGGAGCTGGTTC+TGG 0.335093 6.3:+43614500 MS.gene039360:intron
ATGTAACTGTTCGGAAGGTT+GGG 0.352264 6.3:+43614373 MS.gene039360:CDS
CACATGATATATTTGTTGAA+TGG 0.362820 6.3:+43607126 MS.gene039360:CDS
GAGTAGTGTACTCTTCAAAA+AGG 0.364896 6.3:+43613497 MS.gene039360:CDS
ACATGATATATTTGTTGAAT+GGG 0.367077 6.3:+43607127 MS.gene039360:CDS
TCCTTAATTACATAATCATC+TGG 0.370121 6.3:-43609060 None:intergenic
TACCGAGATGTATTTATTGA+TGG 0.370364 6.3:+43608949 MS.gene039360:CDS
CCACATAAATCTGTTCTTGT+TGG 0.373003 6.3:+43613699 MS.gene039360:CDS
CTGCAGGAATATCACACTTC+TGG 0.373439 6.3:+43606948 MS.gene039360:intron
CAGATGTTCATTGGTTTACA+TGG 0.373762 6.3:+43610519 MS.gene039360:CDS
GCACCGAGGTGAAGTGTATC+AGG 0.374774 6.3:-43605123 None:intergenic
AGAAAGTCCAAGGTGCTTAA+TGG 0.378539 6.3:-43605157 None:intergenic
ATGCTGTTGATTTCAATCAT+AGG 0.380186 6.3:+43605643 MS.gene039360:CDS
AAGCTTCTTCTTTCTTCATT+CGG 0.387369 6.3:-43608320 None:intergenic
ATGTTAGCCTTGTTACAGTT+TGG 0.392282 6.3:-43605430 None:intergenic
AACTGAGCCTGTATATAGAT+TGG 0.393815 6.3:+43605194 MS.gene039360:CDS
TCTCTCCACCAAGGGTGTTC+CGG 0.394987 6.3:+43613752 MS.gene039360:CDS
AACTTACATTATTTGCTGTC+TGG 0.398833 6.3:-43609095 None:intergenic
GGATGAGGCGCTCCGGAAAC+GGG 0.399160 6.3:-43613678 None:intergenic
TGTGTCCAAGCGAGTTCCTT+TGG 0.407065 6.3:+43608260 MS.gene039360:CDS
GGTCCAAGTCAGATGTTCAT+TGG 0.410764 6.3:+43610510 MS.gene039360:intron
CATTCAACCTTTGGACCATC+AGG 0.418043 6.3:-43606997 None:intergenic
AAAAGCAAGTCTTATGAAAG+AGG 0.418283 6.3:+43608344 MS.gene039360:CDS
TTGCCAGTATCAATGATCAT+TGG 0.424747 6.3:-43608411 None:intergenic
GATCCAATGATCATTGATAC+TGG 0.425609 6.3:+43608408 MS.gene039360:CDS
TATGTAACTGTTCGGAAGGT+TGG 0.431232 6.3:+43614372 MS.gene039360:CDS
TCTCATAACAGGGAAACATT+GGG 0.435796 6.3:-43608999 None:intergenic
CCAAGGTGCTTAATGGCATA+TGG 0.442567 6.3:-43605150 None:intergenic
ATCCGTCCAGCAGTGTCAAC+AGG 0.446345 6.3:-43606152 None:intergenic
GACATACAGAAGGAGGCAAA+TGG 0.447191 6.3:+43604802 MS.gene039360:CDS
TTCTCATAACAGGGAAACAT+TGG 0.452605 6.3:-43609000 None:intergenic
ACAGGCTCAGTTGAATAAAC+AGG 0.455744 6.3:-43605183 None:intergenic
TGGGAGAATATGAAATTGCT+TGG 0.456912 6.3:+43613607 MS.gene039360:CDS
ATTGGAACTTATTCTGATGC+TGG 0.457917 6.3:+43606175 MS.gene039360:CDS
AGAAGTCCCAATCTATATAC+AGG 0.459315 6.3:-43605201 None:intergenic
TCAGGCAATGCTGCTTCAGA+TGG 0.460232 6.3:-43613289 None:intergenic
TGGATGAGGCGCTCCGGAAA+CGG 0.461065 6.3:-43613679 None:intergenic
TCCAAGCGAGTTCCTTTGGT+TGG 0.466424 6.3:+43608264 MS.gene039360:CDS
ACTGAGCCTGTATATAGATT+GGG 0.470505 6.3:+43605195 MS.gene039360:CDS
ATTTCAATCATAGGAAAGAA+AGG 0.472840 6.3:+43605652 MS.gene039360:CDS
ACATATGTAAGAAAGTATAT+AGG 0.476871 6.3:-43606326 None:intergenic
CCATATGCCATTAAGCACCT+TGG 0.482920 6.3:+43605150 MS.gene039360:CDS
ACTCAGCAAATTATTATTGA+AGG 0.483695 6.3:+43614524 MS.gene039360:CDS
TGTAGGTGGAATTTGCTGGC+GGG 0.484910 6.3:+43614331 MS.gene039360:intron
CGTGAGGACAGACATTCTTC+AGG 0.489273 6.3:-43613307 None:intergenic
TTTAACCAATACTAGGAAAG+GGG 0.489382 6.3:+43605532 MS.gene039360:intron
CGAACCTGGAAAGGGGTTGA+AGG 0.490438 6.3:-43604984 None:intergenic
GCTTGGGTTGATGCTGAAGC+AGG 0.491910 6.3:+43613624 MS.gene039360:CDS
ACTTATTCTGATGCTGGAAT+CGG 0.494101 6.3:+43606181 MS.gene039360:CDS
TCCATGGCTAGTTTGGAAGC+TGG 0.494969 6.3:+43607098 MS.gene039360:CDS
GCATCGGTTATTAGAACAGC+CGG 0.495868 6.3:-43605803 None:intergenic
TTACTACCTGTTGACACTGC+TGG 0.496285 6.3:+43606146 MS.gene039360:CDS
CCATGTTGCTCCCCTAAAGC+TGG 0.498843 6.3:+43610588 MS.gene039360:CDS
TCAGCCTTACAGACGTCAAA+AGG 0.498981 6.3:+43605844 MS.gene039360:CDS
AGTAACGACGAACCTGGAAA+GGG 0.499715 6.3:-43604992 None:intergenic
TCACCTTTCTTGAGAGGAAG+TGG 0.505633 6.3:-43605236 None:intergenic
CGAAGAGCTAATTGCCTATG+AGG 0.506106 6.3:+43608287 MS.gene039360:CDS
CAGAATTACCGGAACACCCT+TGG 0.509505 6.3:-43613760 None:intergenic
GCCAACCAAAGGAACTCGCT+TGG 0.518369 6.3:-43608265 None:intergenic
TTGTTCAAAGGACTTCGCTA+TGG 0.520008 6.3:-43606402 None:intergenic
ACATACAGAAGGAGGCAAAT+GGG 0.521567 6.3:+43604803 MS.gene039360:CDS
GTGATTGCACCACATACTGC+TGG 0.522810 6.3:+43605564 MS.gene039360:CDS
ATAGGTTGTTCTAGCATCCA+TGG 0.523002 6.3:+43607082 MS.gene039360:intron
TTTCACGTAATCAATAGTGC+TGG 0.523750 6.3:-43606354 None:intergenic
TTATGAGAATATATCAGAAT+GGG 0.526656 6.3:+43609014 MS.gene039360:CDS
TTATAGTAATCTTCGCATAG+AGG 0.526807 6.3:-43614548 None:intergenic
ATTCAAAGCATTATAAGCAT+CGG 0.529940 6.3:-43605819 None:intergenic
GTTATGAGAATATATCAGAA+TGG 0.530769 6.3:+43609013 MS.gene039360:CDS
CAGCTTTAGGGGAGCAACAT+GGG 0.532123 6.3:-43610587 None:intergenic
ACGTGAAAAGTTTCCTTGAG+TGG 0.535300 6.3:+43606369 MS.gene039360:CDS
GAGTAACGACGAACCTGGAA+AGG 0.537415 6.3:-43604993 None:intergenic
ATATGGAAAATTACAAAGGA+TGG 0.538658 6.3:+43605606 MS.gene039360:CDS
GTAGGTGGAATTTGCTGGCG+GGG 0.543941 6.3:+43614332 MS.gene039360:intron
AATTACCGGAACACCCTTGG+TGG 0.550482 6.3:-43613757 None:intergenic
ACCAGCTTCCAAACTAGCCA+TGG 0.550717 6.3:-43607099 None:intergenic
CTGCTTTCCAAACTGTAACA+AGG 0.551071 6.3:+43605423 MS.gene039360:CDS
TTTATGTGGATGAGGCGCTC+CGG 0.551907 6.3:-43613685 None:intergenic
CCAGCTTTAGGGGAGCAACA+TGG 0.552651 6.3:-43610588 None:intergenic
AAACCAATGAACATCTGACT+TGG 0.554970 6.3:-43610513 None:intergenic
CAATACATACCTTCTGGTGA+TGG 0.555335 6.3:-43608441 None:intergenic
GAAGAATTTAAAGCATCTCA+AGG 0.558660 6.3:+43608366 MS.gene039360:CDS
GAAAATTACAAAGGATGGTG+AGG 0.559500 6.3:+43605611 MS.gene039360:CDS
CATGATATATTTGTTGAATG+GGG 0.560049 6.3:+43607128 MS.gene039360:CDS
TGTAACTGTTCGGAAGGTTG+GGG 0.561028 6.3:+43614374 MS.gene039360:CDS
TGACCACTTCCTCTCAAGAA+AGG 0.561523 6.3:+43605233 MS.gene039360:CDS
AAGCAGTTTCTCTCCACCAA+GGG 0.562590 6.3:+43613744 MS.gene039360:CDS
GGGAGAATATGAAATTGCTT+GGG 0.563225 6.3:+43613608 MS.gene039360:CDS
TATCTTAAAGAAGACTCTAA+GGG 0.565189 6.3:+43606109 MS.gene039360:CDS
ATCCATCAATAAATACATCT+CGG 0.567000 6.3:-43608951 None:intergenic
ACCTGGAAAGGGGTTGAAGG+AGG 0.567236 6.3:-43604981 None:intergenic
ATTGGGGCAACACTAGATGA+AGG 0.567377 6.3:-43608982 None:intergenic
CAAAAGTTATATCTGATGAA+AGG 0.568180 6.3:+43609612 MS.gene039360:CDS
GACCTCGACAATGCTCCTGA+TGG 0.570010 6.3:+43606982 MS.gene039360:CDS
AGAACAGATTTATGTGGATG+AGG 0.571503 6.3:-43613693 None:intergenic
CAAAAGGACAAAGAATTTGG+AGG 0.574122 6.3:+43605860 MS.gene039360:CDS
GCTGGCGGGGCTTTGCGTTG+TGG 0.576450 6.3:+43614345 MS.gene039360:CDS
TTATTTAGACATACAGAAGG+AGG 0.582426 6.3:+43604795 MS.gene039360:CDS
TTTAACTCACCTTTCTTGAG+AGG 0.583817 6.3:-43605242 None:intergenic
CCTGGAAAGGGGTTGAAGGA+GGG 0.584424 6.3:-43604980 None:intergenic
AAGAATTTAAAGCATCTCAA+GGG 0.585980 6.3:+43608367 MS.gene039360:CDS
GAAAGGGGTTGAAGGAGGGA+AGG 0.587995 6.3:-43604976 None:intergenic
CCAACAAGAACAGATTTATG+TGG 0.588336 6.3:-43613699 None:intergenic
TCAATAGTCTCTTCAATTTG+GGG 0.589755 6.3:-43613338 None:intergenic
CAATGCTCCTGATGGTCCAA+AGG 0.590968 6.3:+43606990 MS.gene039360:CDS
GACCATCAGGAGCATTGTCG+AGG 0.591660 6.3:-43606984 None:intergenic
TGGAATCACTCATCCACTCA+AGG 0.592275 6.3:-43606382 None:intergenic
AAACAGGAGCAGAAAGTCCA+AGG 0.594350 6.3:-43605167 None:intergenic
AAAAGATGTCCAGCAGTATG+TGG 0.596134 6.3:-43605573 None:intergenic
TATCACACTTCTGGTTAGCA+AGG 0.599346 6.3:+43606957 MS.gene039360:CDS
GTGGTGAATATGTAACTGTT+CGG 0.599437 6.3:+43614364 MS.gene039360:CDS
ATGATATATTTGTTGAATGG+GGG 0.601146 6.3:+43607129 MS.gene039360:CDS
AAGATCCATACCAGCTTTAG+GGG 0.603805 6.3:-43610598 None:intergenic
GAGGCAAATGGGAACATCTG+TGG 0.608734 6.3:+43604814 MS.gene039360:CDS
TTGTAGGTGGAATTTGCTGG+CGG 0.609773 6.3:+43614330 MS.gene039360:intron
TTAAAGAAGACTCTAAGGGC+CGG 0.610479 6.3:+43606113 MS.gene039360:CDS
TTATTATTTAGACATACAGA+AGG 0.615395 6.3:+43604792 MS.gene039360:CDS
GGTTGGGGATGCAACTCAGA+AGG 0.617332 6.3:+43614389 MS.gene039360:CDS
ATTAGCTCTTCGCCAACCAA+AGG 0.620173 6.3:-43608276 None:intergenic
GATGAGGCGCTCCGGAAACG+GGG 0.621124 6.3:-43613677 None:intergenic
TGGGGCAACACTAGATGAAG+GGG 0.621813 6.3:-43608980 None:intergenic
TTTCTGCTTGCAGTATTGGG+CGG 0.622415 6.3:+43606286 MS.gene039360:intron
TACCTGTTGACACTGCTGGA+CGG 0.625845 6.3:+43606150 MS.gene039360:CDS
AAAGGGGTTGAAGGAGGGAA+GGG 0.626232 6.3:-43604975 None:intergenic
AGGTAGTAACACATTGCCAC+CGG 0.627698 6.3:-43606132 None:intergenic
CTTGGGTTGATGCTGAAGCA+GGG 0.629218 6.3:+43613625 MS.gene039360:CDS
TTAACCAATACTAGGAAAGG+GGG 0.630821 6.3:+43605533 MS.gene039360:intron
TACGATATGGAAAATTACAA+AGG 0.631821 6.3:+43605602 MS.gene039360:CDS
AATAATCAACCATCACCAGA+AGG 0.637151 6.3:+43608432 MS.gene039360:CDS
CTCATAACAGGGAAACATTG+GGG 0.637816 6.3:-43608998 None:intergenic
CTTATAAGCACATAAATCAG+AGG 0.637999 6.3:-43613366 None:intergenic
TAAGCAGTTTCTCTCCACCA+AGG 0.640963 6.3:+43613743 MS.gene039360:CDS
TTGGGGCAACACTAGATGAA+GGG 0.641752 6.3:-43608981 None:intergenic
CATCGGTTATTAGAACAGCC+GGG 0.642673 6.3:-43605802 None:intergenic
TGTAATTAAGGAAGAAGACG+TGG 0.645246 6.3:+43609071 MS.gene039360:CDS
ATTTGGGGAGCGTAAACGTG+AGG 0.646771 6.3:-43613323 None:intergenic
AAGAAGACTCTAAGGGCCGG+TGG 0.652875 6.3:+43606116 MS.gene039360:CDS
AGAATTTAAAGCATCTCAAG+GGG 0.660819 6.3:+43608368 MS.gene039360:CDS
TGAATATGTAACTGTTCGGA+AGG 0.671991 6.3:+43614368 MS.gene039360:CDS
GTAACGACGAACCTGGAAAG+GGG 0.682343 6.3:-43604991 None:intergenic
TCTGATATATTCTCATAACA+GGG 0.694888 6.3:-43609009 None:intergenic
GGGGCAACACTAGATGAAGG+GGG 0.696699 6.3:-43608979 None:intergenic
CATCCTGATACACTTCACCT+CGG 0.727465 6.3:+43605120 MS.gene039360:CDS
GGGCAACACTAGATGAAGGG+GGG 0.732882 6.3:-43608978 None:intergenic
TGGCATATGGTAAAGCACCG+AGG 0.792692 6.3:-43605137 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.3 gene 43604789 43614610 43604789 ID=MS.gene039360
chr6.3 mRNA 43604789 43614610 43604789 ID=MS.gene039360.t1;Parent=MS.gene039360
chr6.3 exon 43604789 43604838 43604789 ID=MS.gene039360.t1.exon1;Parent=MS.gene039360.t1
chr6.3 CDS 43604789 43604838 43604789 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43604957 43605001 43604957 ID=MS.gene039360.t1.exon2;Parent=MS.gene039360.t1
chr6.3 CDS 43604957 43605001 43604957 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43605086 43605254 43605086 ID=MS.gene039360.t1.exon3;Parent=MS.gene039360.t1
chr6.3 CDS 43605086 43605254 43605086 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43605380 43605476 43605380 ID=MS.gene039360.t1.exon4;Parent=MS.gene039360.t1
chr6.3 CDS 43605380 43605476 43605380 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43605547 43605673 43605547 ID=MS.gene039360.t1.exon5;Parent=MS.gene039360.t1
chr6.3 CDS 43605547 43605673 43605547 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43605766 43605881 43605766 ID=MS.gene039360.t1.exon6;Parent=MS.gene039360.t1
chr6.3 CDS 43605766 43605881 43605766 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43606108 43606202 43606108 ID=MS.gene039360.t1.exon7;Parent=MS.gene039360.t1
chr6.3 CDS 43606108 43606202 43606108 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43606299 43606450 43606299 ID=MS.gene039360.t1.exon8;Parent=MS.gene039360.t1
chr6.3 CDS 43606299 43606450 43606299 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43606954 43607011 43606954 ID=MS.gene039360.t1.exon9;Parent=MS.gene039360.t1
chr6.3 CDS 43606954 43607011 43606954 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43607086 43607193 43607086 ID=MS.gene039360.t1.exon10;Parent=MS.gene039360.t1
chr6.3 CDS 43607086 43607193 43607086 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43608201 43608453 43608201 ID=MS.gene039360.t1.exon11;Parent=MS.gene039360.t1
chr6.3 CDS 43608201 43608453 43608201 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43608923 43609110 43608923 ID=MS.gene039360.t1.exon12;Parent=MS.gene039360.t1
chr6.3 CDS 43608923 43609110 43608923 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43609545 43609637 43609545 ID=MS.gene039360.t1.exon13;Parent=MS.gene039360.t1
chr6.3 CDS 43609545 43609637 43609545 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43610511 43610609 43610511 ID=MS.gene039360.t1.exon14;Parent=MS.gene039360.t1
chr6.3 CDS 43610511 43610609 43610511 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43613257 43613388 43613257 ID=MS.gene039360.t1.exon15;Parent=MS.gene039360.t1
chr6.3 CDS 43613257 43613388 43613257 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43613474 43613518 43613474 ID=MS.gene039360.t1.exon16;Parent=MS.gene039360.t1
chr6.3 CDS 43613474 43613518 43613474 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43613606 43613773 43613606 ID=MS.gene039360.t1.exon17;Parent=MS.gene039360.t1
chr6.3 CDS 43613606 43613773 43613606 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43614336 43614410 43614336 ID=MS.gene039360.t1.exon18;Parent=MS.gene039360.t1
chr6.3 CDS 43614336 43614410 43614336 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
chr6.3 exon 43614509 43614610 43614509 ID=MS.gene039360.t1.exon19;Parent=MS.gene039360.t1
chr6.3 CDS 43614509 43614610 43614509 ID=cds.MS.gene039360.t1;Parent=MS.gene039360.t1
Gene Sequence

>MS.gene039360

ATGTTATTATTTAGACATACAGAAGGAGGCAAATGGGAACATCTGTGGAAGTAACACCACTTTGTGGAGTATACAATGAAAACCCTCTCTCTTACATGGTTTCCATTGATTCTTTCAACATCCTCATTGACTGTGGTTGGAACGATCACTTCTTTTTTTTGGTAACAGTTGGAACGATCACTTCGACCCTTCCCTCCTTCAACCCCTTTCCAGGTTCGTCGTTACTCATAACGAACGCTTTGTGGCTTTATTCCCTTTGATTTCTTATTTAGCTTGTGTGACTGATATGTAATGTAGGGTAGCATCAACTATTGATGCTGTTTTACTTTCACATCCTGATACACTTCACCTCGGTGCTTTACCATATGCCATTAAGCACCTTGGACTTTCTGCTCCTGTTTATTCAACTGAGCCTGTATATAGATTGGGACTTCTCACTATGTATGACCACTTCCTCTCAAGAAAGGTGAGTTAAAAAATGTACATGTCATTTTGCAAAATGGTTTGGTTGAGACTTGAGACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTTTTGCAGCAAGTGTCGGAGTTTGATCTGTTCACTCTAGATGATATTGATTCTGCTTTCCAAACTGTAACAAGGCTAACATACTCTCAGAATCATCATCTTTCAGGTAGGCATTTCATTTCAATGTCATATATCTAAACAGTTTCCTCAATTTATGACATTTTAACCAATACTAGGAAAGGGGGAGGGAATCGTGATTGCACCACATACTGCTGGACATCTTTTGGGAGGTACGATATGGAAAATTACAAAGGATGGTGAGGATGTCATATATGCTGTTGATTTCAATCATAGGAAAGAAAGGTAAATTATTTATTTTTTTATTTCTCCAAAAATTTTCTTGTGTATTCTTAACGACCAGAAAGGAAGCTACTTATCAATCTAATTTTCACTAGGCATTTGAACGGAACTGTTCTAGGTTCTTTTGTTCGCCCGGCTGTTCTAATAACCGATGCTTATAATGCTTTGAATAATCAGCCTTACAGACGTCAAAAGGACAAAGAATTTGGAGGTAACTAACATTTAAATCTTATAATTGCTACTCTTTGACAGAAATAAGGTGAATTTTTCATTTTTTGTTTTCTTGAGTTGCTATCAAGAGAAAACTGAAATATTTTTATGCCTGGGATATTCAAAGACGTGGCATGCAAGCATTAAAAAGTCTTCATCACGAAATAAGAAAACTGTCTAGACTATGTACTTTGTTTTTCTGATCATATATCTTGTTGGTTATTTAGATATCTTAAAGAAGACTCTAAGGGCCGGTGGCAATGTGTTACTACCTGTTGACACTGCTGGACGGATATTGGAACTTATTCTGATGCTGGAATCGGTCAGTACAAGAAAAGAATTACGCTTTTATTCTCTCTTTCTTAGTTTATTCCTGAATGTACATGCATGAGTTGACATCAGATCTTTCTGCTTGCAGTATTGGGCGGATGAAAACTTGAACTATCCTATATACTTTCTTACATATGTTGCATCCAGCACTATTGATTACGTGAAAAGTTTCCTTGAGTGGATGAGTGATTCCATAGCGAAGTCCTTTGAACAAACTCGTGAAAATATATTTCTTCTGAAGTAAGTTGCATCTTCCTTGATTTATATTGGGAGCAAGATATTTATATGTCAATTGAATTTTTGTTCTTGGGGATGCTACGATGCCTTTTTATTGTTTAAAATTTCAAACCTAAAAGTAATGATTTTCTTGTGATATTTTAAAATAGAAGATTTTGTTCAGTCATAGGTGAAAGATGAGTTTTAATAACCTACAGGTTGTCACACACACTTTGAGGATCTTTCCTATATATGTATTAAACAAATATTTAAGAGAGAGGGAGATATGCACTTTCAGTGTAAACTAGTTTTACACCGATTTCCAAGAAGAATCCAGTATTTTAGTTATTTTTAAAATGTTGTTGAAAAATCGGTTTATGTGGCAATATGATGAATTGTCTTTGGATGTTGGTGTAGAACTAATTTACACCGGCAATGCACCTCCATTAGCTCAAAAGTTAATCTCCTTTTATTTTAGTTTCTGCATTTATCTTGTGTTTAAAATAGACTGTAATGCCTATCTGCAGGAATATCACACTTCTGGTTAGCAAGGCTGACCTCGACAATGCTCCTGATGGTCCAAAGGTTGAATGATTTTTTATGCTAATACTTTATCAGGCCTGCTTCCTTACTGATTCTGATACACATATCTTGTATAGGTTGTTCTAGCATCCATGGCTAGTTTGGAAGCTGGTTTTTCACATGATATATTTGTTGAATGGGGGAACGATGTCAAAAATCTTGTGCTTTTTACTGAAAGAGGCCAGGTATACTCTTCAGACTGAAAACATTTCTGATGTATTGTGTTTTAGTATTCTTGTGATAGAACTTCATTGGAAAATTCCTACTCTTGTTCAAGGGAACCTAAAGGAAAATGAAGCAAGAGTGCTTGAGAGTAGAGACTAGGCAACTCAATAAACAACTAACTCCCTACATTCGTCCCCAATGTGTGGCTCAAGTGGTTGAGCTGGAACAACTGAAAGAGTTTGAGAAGCAGTTCTAGAGTTCAAACTCTGGCTACTTAAAACCCATTTGGTGTTGGCTTGGGACCTTGGAGTGTGCTCCTCTCAAGGTTTCACATTCGATTCCCCATGGTGCCAATTTTAGTGAGCTAAGTCCATATAGAGCTATGCTCTGGCTTTAAATGGGGCACCCCCCGCAAGTGGACGGTGGGATTTGATCCCTCGGGTTAGTCGGTCCTTAGGTTGGATACCGAGTTTGCGAAAAGAAAAAAAAACTCTGGTTACTAACATAACATACTAACAATTCCCAATAATTCTCTTATCTAAATCAAACGAACAATCTTTTCGACAACGCACGTGCGCAAAGCCTTCTTATTTCCCATAATTTTCCTCTTTACTGTCTATGTTTTGAATTTTAGCACATTTTATCTCTTTTATCCCATTAGCCTTTATTAATATTTCATATTATTTTTTATTAGAAAATGCTTTATATTTTGCTAATAGTGTTTGAGAGTTTGTTTTACGTCTTTTGGGCAGTGAGAATGGAATAAGGATCTTGGGTCATGCAACTTATTTTTATTTGTGATGTATTTTTTTTAAAAGATTAATTTTGATACACTATCTAGTATACACAAATCATCCTTTTTATCATTTTTAAGGTAGATATGATTAAAGTTAATTTTTTTTGGTGATCCAACGAGTATGATTGATCGACAGTGTAATACATTATTCATTTCAATTAAATTATTTCTTTAATACTATGTATTTGTTAATCTTATGTTTCAATTGATCCTTATGTGTACAATGCATAGTTTGGCACGCTAGCTCGTATGCTTCAAGCTGATCCACCTCCAAAAGCTGTCAAAGTCACTGTGTCCAAGCGAGTTCCTTTGGTTGGCGAAGAGCTAATTGCCTATGAGGAAGAGCAAAACCGAATGAAGAAAGAAGAAGCTTTAAAAGCAAGTCTTATGAAAGAGGAAGAATTTAAAGCATCTCAAGGGGCTGATAATTATACTATCGATCCAATGATCATTGATACTGGCAATAATCAACCATCACCAGAAGGTATGTATTGTATTAATTATTTTGGAGCTAATATTTAGAAGTGTTTCCCTTTTATTTGTTTTCCTTTCACTACAAATCATGACAACTTTGGTGTTGTTTTCATGTTAAATGCATTCACTTAGGTATTTAAAATTATCCACTTGTGTTTCCTCATATCATAATCATTTTCTTTTCTGTTTTATTTAACTATGCTATTTTGGGTCATGTTTACTTGAATTTTTTCTACTATTATTAGCTGAATCTATTTATCTTTAACCAGTTTTGAATCTTGGGAAGTGCTACACACTCTGAGCGCTAAAACAAAAGAATAAATAAATTCATCTATTCCCTTCTGTTACAAAACAAAACAAAACAACCACTGAAATATATTAAATAAGCTACTTTAATATTCATATAACATAAATCAAATTTGGAATGAACCTACTGATGTTTCTTTCAACCCCTTAAGTAGTTTAATTTGCACTTGCAGCGGCGGCTGTTCCTAAAAACGGAGGATACCGAGATGTATTTATTGATGGATTTGTCCCCCCTTCATCTAGTGTTGCCCCAATGTTTCCCTGTTATGAGAATATATCAGAATGGGATGATTTTGGTGAAGTCATAAATCCAGATGATTATGTAATTAAGGAAGAAGACGTGGACCAGACAGCAAATAATGTAAGTTTCCTTTTTAAAATATCAGCCTTGTGACTTCTCAGTTTCAATTGAAATATCTATTCCAGTTCAAAATGACATTAGTGTTCATATCATGTTTCTGTTCTGAGTTACTAGTCTATTGTAGAACACATTATAAAAGAAAAGCTTATAAAGGTTAATATAATTTACATTGATAAAGGTTAATGATATCATTGGATTGAAAAGGAGTTGGAAACCTTATAAATGATAAGATTTGATACATTCGGCTTATGGAAAAGCTAGTCTTTAGATGACTTAAATATGGAATGCGAGACATTCGTCTTCTATCCATGAAAAATATTTGCTGTGATCCAAGTTTTCTTATTGGTGATTAAAAATGTTTGCTGGTATTTGCACTCCAACCCTATATTATGAATAATAATACTTGTTTATCATTTTCCTATTTTTTATATTAGGTAGGTGGTGATTTAAATGGAAAACTAGATGAAAGTGCTGCAAGTTTGATATTTGATACAAAGCCATCAAAAGTTATATCTGATGAAAGGACTGTAAGCTTCACTCACTATCTTTTTCTTAAATCTTTATGTTTCCTGTTCTTATGATTAGTAATTTTATGCAATTGTGTTTGAATTTATTACTGCTATATTCATATATTGATTGGATGAATGAAGTTGAATCACCTTTTCCCTTTTTGGCTTTGTCACCAAATTTATTACTTTTGCAAATATTAAAAGTCTCCTCTCACCTGTCTTCGATATTTTACAAAAGATGCTATTATGTTTGTTTTTTCTAACATTTGTATTAGTCCTGCAAAGGATTTTTTTTCCCAAACCATTTTTTTGTTCCTTAGTTAGATTATAGTCTCCAATGGAAGTTTATCTTTACAGGCATTTTTATCTTATTTTATCCCTTAAATTCTATATATTAGGCGGAACATCGATGCAATAGGTTACAGAGTTGAAACCATATTCATGATTTATTAAAATTCTAAGCGATGTGGTGTGCATTAGGGTTGAGTTCGACCAATCCAAATTCTAAGATGGTATTAATGTTTATCCTAAATCCACTGGGCCACCCACTGTCGGACTACTCGGGTCACACTCTGGATGTCCAGTCATGGGTGTGAGGGGGTGTTTAGATTCCCACACTAGAGAGATATGACCTTATAGACATCCCTCACCTTGTAAGCCAGGTTTGTAGGGTTGAGTTAGGTTCACCCAGATTCTAAGATACATTTAAATTTCAGACTGCAAATCACATTAGACCAGAAATATTATGATGGGGCAAGGAAGCTTGTTTTGATTGTGGATTTACACTTGCATTTCTTGTATTTGTATAACTTTAGCATTTATTAATCTACTTGTATGAATCTTAAATGCGCCAAATCTGCTTATGATGGTGTTGATTTTGTTGTTGTCTAGGTCCAAGTCAGATGTTCATTGGTTTACATGGATTTTGAAGGTCGTTCAGATGGAAGATCAATTAAGAACATTCTCTCCCATGTTGCTCCCCTAAAGCTGGTATGGATCTTTTTGGTCTTTTTCAATTCAATCAACAAGGACATCATAAATCTTCTATAACGTACTTGTATTTGGGGGATAGATCAGAACTCATAGGTTGCCATATCTTTCCACCATTAAAAACCATATGATATTTGAAAATAATTTATTGGTTTAAATATGATTTTCGTCCCTGTAAATTTTTGTTTGAAAATGGTCCCTGGCCCCACTGTTCAGCTGACTTGGCATGGTTTTGGCCACGTGGCAGTTGCTGACTGTGCAACTTTTGCCACGTGGCACTGACGTGGCGTGCCACATATATTAAATTTTAAAAAAATATTTTAAAAATTCTGAAAATTGTTTTTAAAATTAAAAAATATGAAAATAAATTTAAAAATCATAAAAAAATTCCGAAAAAAATCTGAAAATTATAAAAAATTTCCGAAAAATCTGAAAATAAATTTAAAAATCATAAAAAATTTCTGAAAAAAATTTGAAAATTATAAAAAATTTCCGAAAAATCTGAAAATAAATTTTAAAATTCTGAAAATAAATTTTAAAATATGAAAATAATTTTTTTGAATATTATATATTCTGAAAAAAATATTTTTTTTTTAAAATTAGAATTTTCATAAAAGAATAAGAAATTAGATTTTTTTTATTAAATTATAATTTATTTTCAGAAAATATAATTGCCATTGTTTTTTGAAAAAAATTTATATATAATTTTCAAATAAAAAAAATCTATTTTTCGAAATTTTTTTATGATTAATTTATTTTCAGATTTTTCGGAAATTTTTTATAATTTTCAGATTTTTTTCGAAAATTTTTTATGATTTTTAAATTTATTTTCAGATTTTTCGGAAATTTTTTATAATTTTCAGATTTTTTATGATTTTTAAATTTATTCAGATTTTTCGGAAATTTTTTATAATTTTCAGATTTTTTTGGGATTATTTTTATGATTTTTAAATTTATTTTCAGATTTTTTAAATTTAAATAAATAATTTTCAGAATTTTATTTTTTAATTACGTTTCTGAAAAAAATTTGAAAATTATAAAAAATTTCCGAAAAATCTGAAAATAAATTTTAAAATTCTGAAAATAAATTTTAAAATATGAAAATAATTTTTTTGAATATTATATATTCTGAAAAAAATATTTTTTTTTTAAAATTAGAATTTTCATAAAAGAATAAGAAATTAGATTTTTTTTATTAAATTATAATTTATTTTCAGAAAATATAATTGCCATTGTTTTTTGAAAAAAATTTATATATAATTTTCAAATAAAAAAAATCTATTTTTCGAAATTTTTTTATGATTAATTTATTTTCAGATTTTTCGGAAATTTTTTATAATTTTCAGATTTTTTTCGAAAATTTTTTATGATTTTTAAATTTATTTTCAGATTTTTCGGAAATTTTTTATAATTTTCAGATTTTTTATGATTTTTAAATTTATTCAGATTTTTCGGAAATTTTTTATAATTTTCAGATTTTTTTGGGATTATTTTTATGATTTTTAAATTTATTTTCAGATTTTTTAAATTTAAATAAATAATTTTCAGAATTTTATTTTTTAATTACGTGGACCGCCACGTGGCAAAAGTTGCACAGTCAGCAACTGCCACGTGGCGAATACCATGCCAAGTCAGCTGAACAGTGGGGCCAGGGACCATTTTCAAACAAAAATATTTTTACAGGGACGTAATTCAAACTTTTTTTTTGACAGGGACGAAAATCAAAACACGCCTATATTACAGGGACGAAAATCATATTTAAGCCTAATTTATTTTAATTTTTAGTTGATGTGAAAAAGTGTTGTCAACCGCGGATTGCGGAAAATAGTGCTCTGTTAAAATTCCTCCTCTACCCTATAATGCTATTAGTGCTACTATAGCCACTGTTTGTCAACACTTTGACTAAATCGCACATCCCAGAACAATAGCAGTTTGTTAAAATTCACTACCCTATAGCGACTATTTGACAACACTGATACAATATTTTAAGCAAAGAATACTGTGACCTTCTGGCTGCAATTTTCAGTAGGGCAACGAATTAGGATTTTAGCTAACTAGGGTTATAGCTTATTATTTTATAAAGGCACTGGAATTTGAAAATATGTAAAATCTAAGATGCCTACTTAACGTATTAAGTTCTATTGAAATGCACACTATTGATAACTATGGCTGTGTGTTGTCAAAAGCTTAAGCCGTGACAATTTTGCTAACTATAGCTATCAAATGAATACTAATGATAAATATGCACATTTTGTTTGATTTTTTTTTTTTCTTTGTTTGTTTGTGTTGTGTTGCATTTTTCCTTCACACCTTATTACTTTAATGTTTGTATTTCTCTAATTTATCTGTTTACATATATAATGTGTTCTATTCTTATCTATGACGTCTATTATATATTCTATTTTATGTTCACATTCCTATTAATTGTGTACTAGTCTTTAATTTTGAGAAATATTTTTATTTTCTCATTTATAAAATGTTTTGTACAAATAATTTATATTCTTCGGCACAGCAGCCATCTTGCTATTGCAATTTTGGAATTGGCAACTCCACTCTAAGCAATCTATTTGTCATGTTTATCATTGTATCATTTGCTTTTATTATTTTTATACCATGCATGATGATGAATCTCACTATTATCCTGAAGGTTTTGGTGCATGGATCGGCTGAAGCTACAGACCATCTGAAGCAGCATTGCCTGAAGAATGTCTGTCCTCACGTTTACGCTCCCCAAATTGAAGAGACTATTGATGTTACCTCTGATTTATGTGCTTATAAGGTGCAATGACATCAAATTTTGTACATTTGCCGAAAAAACTGTACAACATGTCAAAATTAATCATGTTATGCTTTTCTGGTTATAGGTTCAATTATCTGAGAAGTTAATGAGTAGTGTACTCTTCAAAAAGGTATATAATATATGTCTGAACTGATTCATTTTATACAAATCGTCTGCCAGTTATTGTCTTGAATAATAAACATAAATTCAATTGCAGCTGGGAGAATATGAAATTGCTTGGGTTGATGCTGAAGCAGGGAAGACAGAAAATGACATGCTTTCGCTTCTCCCCGTTTCCGGAGCGCCTCATCCACATAAATCTGTTCTTGTTGGTGATTTGAAATTGGCAGATTTTAAGCAGTTTCTCTCCACCAAGGGTGTTCCGGTAATTCTGCATTTATAGATCCAGTACCAGTTTACTAATTCCTTCTTGCACTGATTTTTTATTGGTAAATGGAGTGATTTCCTTTTCATTTCCCTAGCATTGAAAATGCGGGTTACCATGTGTTCTGAAACTGAAACTTGACTCAATTAAATCTGAACATTTTCTACTTTATAAAAAATGCTTCATTACAGTTTTGGTCCCCTTATTTTTACTCATCCACGGAATTGATCCCCCCCCCAATTTAAAATCATGCGGTTTTGGTCCCTTTTTCATATTTTTCAACTCAGAATTGTTGATGTGACATGTTTTAAATGATGTGTCATTCGACCTGATGATGTCAAATTATCACCAACAATGAAATTACCAGAAAACCCCCTTAAAACTTCAATTTCAATATCACCATTTTTTATTTCAAAAAATCGGAAAAAGGACCAAAACTGTGATTTTAAAATGGGGGGACCAATTTCTTGCGAGTAAAAATATGGGGGCCAAAAAAATATGGGGATCAAAATTGTAATCAAGCCTATAAAAAAATTGTGTCATAACATGATAACTTTTGTAGGTGGAATTTGCTGGCGGGGCTTTGCGTTGTGGTGAATATGTAACTGTTCGGAAGGTTGGGGATGCAACTCAGAAGGTAAATGCTTCTTCTGAACATTTGTTAAATTTTATATTTTCTTAGGAAAATGACTTTTCTGATAAAGATTCTGATTCATTATCATATTTTTTAAACAGGGAGCTGGTTCTGGTACTCAGCAAATTATTATTGAAGGTCCTCTATGCGAAGATTACTATAAAATTCGAGATTATCTCTACTCGCAGTTTTACTTGCTTTAG
Protein sequence

>MS.gene039360.t1

MLLFRHTEGGKWEHLWNWNDHFDPSLLQPLSRVASTIDAVLLSHPDTLHLGALPYAIKHLGLSAPVYSTEPVYRLGLLTMYDHFLSRKQVSEFDLFTLDDIDSAFQTVTRLTYSQNHHLSGKGEGIVIAPHTAGHLLGGTIWKITKDGEDVIYAVDFNHRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAGRILELILMLESYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIFLLKNITLLVSKADLDNAPDGPKVVLASMASLEAGFSHDIFVEWGNDVKNLVLFTERGQFGTLARMLQADPPPKAVKVTVSKRVPLVGEELIAYEEEQNRMKKEEALKASLMKEEEFKASQGADNYTIDPMIIDTGNNQPSPEAAAVPKNGGYRDVFIDGFVPPSSSVAPMFPCYENISEWDDFGEVINPDDYVIKEEDVDQTANNVGGDLNGKLDESAASLIFDTKPSKVISDERTVQVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATDHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSSVLFKKLGEYEIAWVDAEAGKTENDMLSLLPVSGAPHPHKSVLVGDLKLADFKQFLSTKGVPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL