Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041817.t1 | AES91969.2 | 98.8 | 579 | 7 | 0 | 1 | 579 | 1 | 579 | 9.90E-164 | 587 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041817.t1 | Q8RWG2 | 69.3 | 612 | 157 | 10 | 2 | 595 | 11 | 609 | 4.3e-59 | 230.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041817.t1 | G7JNW2 | 98.8 | 579 | 7 | 0 | 1 | 579 | 1 | 579 | 7.1e-164 | 587.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070503 | MS.gene041817 | PPI |
| MS.gene070507 | MS.gene041817 | PPI |
| MS.gene070492 | MS.gene041817 | PPI |
| MS.gene041817 | MS.gene67840 | PPI |
| MS.gene81622 | MS.gene041817 | PPI |
| MS.gene016743 | MS.gene041817 | PPI |
| MS.gene057884 | MS.gene041817 | PPI |
| MS.gene057883 | MS.gene041817 | PPI |
| MS.gene016742 | MS.gene041817 | PPI |
| MS.gene070510 | MS.gene041817 | PPI |
| MS.gene016758 | MS.gene041817 | PPI |
| MS.gene81617 | MS.gene041817 | PPI |
| MS.gene37911 | MS.gene041817 | PPI |
| MS.gene057886 | MS.gene041817 | PPI |
| MS.gene070509 | MS.gene041817 | PPI |
| MS.gene041817 | MS.gene070511 | PPI |
| MS.gene81620 | MS.gene041817 | PPI |
| MS.gene070505 | MS.gene041817 | PPI |
| MS.gene81615 | MS.gene041817 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041817.t1 | MTR_4g122060 | 97.927 | 579 | 12 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1182 |
| MS.gene041817.t1 | MTR_6g090890 | 24.161 | 298 | 210 | 8 | 233 | 518 | 68 | 361 | 1.19e-12 | 71.2 |
| MS.gene041817.t1 | MTR_5g009520 | 23.102 | 303 | 199 | 6 | 220 | 518 | 90 | 362 | 7.62e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041817.t1 | AT3G17040 | 67.549 | 567 | 157 | 7 | 42 | 595 | 23 | 575 | 0.0 | 754 |
| MS.gene041817.t1 | AT3G17040 | 71.374 | 524 | 126 | 6 | 85 | 595 | 97 | 609 | 0.0 | 754 |
| MS.gene041817.t1 | AT3G17040 | 71.989 | 357 | 80 | 4 | 85 | 429 | 97 | 445 | 0.0 | 522 |
| MS.gene041817.t1 | AT3G17040 | 28.814 | 236 | 164 | 2 | 267 | 501 | 214 | 446 | 7.30e-26 | 111 |
| MS.gene041817.t1 | AT3G17040 | 30.769 | 234 | 158 | 2 | 274 | 506 | 187 | 417 | 1.88e-24 | 107 |
| MS.gene041817.t1 | AT3G17040 | 29.143 | 175 | 117 | 2 | 198 | 366 | 283 | 456 | 7.43e-17 | 84.0 |
| MS.gene041817.t1 | AT3G17040 | 26.066 | 211 | 118 | 3 | 300 | 509 | 179 | 352 | 8.84e-15 | 77.4 |
| MS.gene041817.t1 | AT3G17040 | 29.697 | 165 | 115 | 1 | 170 | 334 | 289 | 452 | 1.18e-13 | 73.9 |
| MS.gene041817.t1 | AT3G17040 | 66.500 | 400 | 111 | 5 | 42 | 429 | 23 | 411 | 0.0 | 520 |
| MS.gene041817.t1 | AT3G17040 | 29.237 | 236 | 163 | 2 | 267 | 501 | 180 | 412 | 2.84e-26 | 112 |
| MS.gene041817.t1 | AT3G17040 | 30.769 | 234 | 158 | 2 | 274 | 506 | 153 | 383 | 2.89e-24 | 106 |
| MS.gene041817.t1 | AT3G17040 | 24.545 | 220 | 162 | 3 | 300 | 518 | 145 | 361 | 1.90e-14 | 76.3 |
| MS.gene041817.t1 | AT4G03430 | 23.693 | 287 | 209 | 3 | 171 | 455 | 712 | 990 | 1.66e-15 | 80.9 |
| MS.gene041817.t1 | AT4G03430 | 23.693 | 287 | 209 | 3 | 171 | 455 | 712 | 990 | 1.66e-15 | 80.9 |
| MS.gene041817.t1 | AT4G03430 | 23.693 | 287 | 209 | 3 | 171 | 455 | 712 | 990 | 1.66e-15 | 80.9 |
| MS.gene041817.t1 | AT3G51110 | 23.891 | 293 | 207 | 7 | 239 | 518 | 55 | 344 | 1.20e-11 | 67.4 |
Find 160 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGCACATTGAACGAATT+TGG | 0.169600 | 8.3:-6962029 | None:intergenic |
| GGCTGTTCTTGAAAAGAAAA+TGG | 0.199509 | 8.3:+6959414 | MS.gene041817:CDS |
| TTGAATTTGAAGAGATAGTT+TGG | 0.245768 | 8.3:-6957402 | None:intergenic |
| TTTGGACTTGGCGTTGTATA+AGG | 0.269191 | 8.3:+6957785 | MS.gene041817:CDS |
| CACAGTCAAAAGCTTATCTT+TGG | 0.274251 | 8.3:-6957760 | None:intergenic |
| TTGGCATGGTTGGGCAGTTC+TGG | 0.276320 | 8.3:+6959504 | MS.gene041817:CDS |
| ACGAATTTGGGTCCATCTTC+AGG | 0.278424 | 8.3:-6962016 | None:intergenic |
| CTTTCGGTGGAATGTAATTT+CGG | 0.278899 | 8.3:-6957551 | None:intergenic |
| ATAGGTTCGCTTGGCATGTC+TGG | 0.285070 | 8.3:+6960040 | MS.gene041817:CDS |
| TGAAGAATGGAAGGGTAAAA+TGG | 0.288692 | 8.3:-6957436 | None:intergenic |
| CTTGGTCGCCATATCCTTCT+TGG | 0.297552 | 8.3:-6962248 | None:intergenic |
| AATGCAGGCATGGGGTGTTC+TGG | 0.316093 | 8.3:+6961048 | MS.gene041817:intron |
| CCATCAAAGTTTGAGTCTTT+CGG | 0.318205 | 8.3:-6957567 | None:intergenic |
| CTCCGGTGAGGAGGTGAAAA+AGG | 0.321280 | 8.3:+6957629 | MS.gene041817:CDS |
| AGATGATGCTTCGTGGGTTA+TGG | 0.321698 | 8.3:+6961947 | MS.gene041817:CDS |
| ACTCTCCCCGGTTCAAATAT+CGG | 0.323023 | 8.3:-6957726 | None:intergenic |
| CATGGAAGTGTTTAAGCTAT+TGG | 0.323518 | 8.3:+6958161 | MS.gene041817:intron |
| TTCCAGCTTGGACACATCTA+TGG | 0.347001 | 8.3:-6962177 | None:intergenic |
| CCGAAAGACTCAAACTTTGA+TGG | 0.349286 | 8.3:+6957567 | MS.gene041817:CDS |
| ATCCCAGGCATCAACCTGTT+TGG | 0.362989 | 8.3:+6960235 | MS.gene041817:CDS |
| TTGTTCGTAGAAGGAAATTT+CGG | 0.364988 | 8.3:-6962215 | None:intergenic |
| GTTGTATAAGGCTAAGGTTT+TGG | 0.365989 | 8.3:+6957797 | MS.gene041817:CDS |
| TTTCGGTGGAATGTAATTTC+GGG | 0.367593 | 8.3:-6957550 | None:intergenic |
| GGCTCGATATTTATTCAATC+AGG | 0.377634 | 8.3:+6959654 | MS.gene041817:CDS |
| CTAATAGGCTTGGGCTCAAA+TGG | 0.378024 | 8.3:+6959813 | MS.gene041817:intron |
| GGCTCAAATGGAGGTGGAAC+AGG | 0.382782 | 8.3:+6959825 | MS.gene041817:CDS |
| GTTCAAGAGAGCATCTGAAT+TGG | 0.383806 | 8.3:+6960212 | MS.gene041817:CDS |
| GTAATTTCGGGTACTCTTCT+CGG | 0.391728 | 8.3:-6957538 | None:intergenic |
| GTGGCACATTGAACGAATTT+GGG | 0.394817 | 8.3:-6962028 | None:intergenic |
| GGAAGAAAACTTCTAAAGAT+AGG | 0.396553 | 8.3:+6960099 | MS.gene041817:CDS |
| GCAGAGGGTTGGCAATCTTT+CGG | 0.407854 | 8.3:+6961072 | MS.gene041817:CDS |
| CTTCAAGCAATGCAAGTGTT+TGG | 0.413000 | 8.3:-6959609 | None:intergenic |
| ACCCTGCCATTGACAGTTTG+AGG | 0.415164 | 8.3:+6961988 | MS.gene041817:CDS |
| GTCCAAGCTGGAAGTTCAAC+TGG | 0.415566 | 8.3:+6962187 | MS.gene041817:CDS |
| CTCCTCAAACTGTCAATGGC+AGG | 0.426754 | 8.3:-6961990 | None:intergenic |
| TGAATTTGAAGAGATAGTTT+GGG | 0.428632 | 8.3:-6957401 | None:intergenic |
| GTAATATTTCTCATGGAATC+AGG | 0.428842 | 8.3:-6962050 | None:intergenic |
| ACATAAAGCCTACCATCTTC+AGG | 0.430007 | 8.3:-6958184 | None:intergenic |
| GATGAAGAAGGTGGAGGAGA+GGG | 0.430756 | 8.3:-6957345 | None:intergenic |
| TGTTGCTGCTTGGCATGGTT+GGG | 0.433975 | 8.3:+6959495 | MS.gene041817:CDS |
| ATGCACCGTGTTGCACTCTC+AGG | 0.434151 | 8.3:+6957478 | MS.gene041817:CDS |
| GGAGAAGGAAATTGTGAAAG+AGG | 0.436595 | 8.3:+6957650 | MS.gene041817:CDS |
| TAGTTACCTGCTGGAAGTAA+AGG | 0.442310 | 8.3:-6961216 | None:intergenic |
| GCTGTTCTTGAAAAGAAAAT+GGG | 0.446389 | 8.3:+6959415 | MS.gene041817:CDS |
| GATTTATGAGAAGGGTTGCC+AGG | 0.448335 | 8.3:+6958258 | MS.gene041817:CDS |
| TGAGTGAGAATTGTAGAACT+TGG | 0.448533 | 8.3:-6957369 | None:intergenic |
| AGGGTGAAAATGCATTCATT+TGG | 0.448950 | 8.3:+6958287 | MS.gene041817:CDS |
| GAAGATGCCGATATTTGAAC+CGG | 0.449593 | 8.3:+6957719 | MS.gene041817:CDS |
| GAAGAATGGAAGGGTAAAAT+GGG | 0.451235 | 8.3:-6957435 | None:intergenic |
| ATGGATGACTTGGGCATCAC+TGG | 0.453367 | 8.3:+6961150 | MS.gene041817:CDS |
| GAAGGGTTGCCAGGCTACTC+AGG | 0.453699 | 8.3:+6958267 | MS.gene041817:CDS |
| AAGGTTCTTCAATTGATGTC+GGG | 0.462649 | 8.3:+6957679 | MS.gene041817:CDS |
| TGAGGTGGGAAGATGAAGAA+TGG | 0.465047 | 8.3:-6957449 | None:intergenic |
| GATGATGCTTCGTGGGTTAT+GGG | 0.466333 | 8.3:+6961948 | MS.gene041817:CDS |
| ATGGAACGCTCGTGGTTCGC+CGG | 0.467163 | 8.3:+6957586 | MS.gene041817:CDS |
| GGGTACTCTTCTCGGAGGGA+GGG | 0.468443 | 8.3:-6957530 | None:intergenic |
| ATCCTAAAAGCTGTGCTAGT+TGG | 0.470170 | 8.3:+6959689 | MS.gene041817:CDS |
| AAAAGAAAATGGGAAATGTC+AGG | 0.470264 | 8.3:+6959425 | MS.gene041817:CDS |
| TGGTTGGCAGTTCTACTACT+TGG | 0.472252 | 8.3:-6962266 | None:intergenic |
| TACCGCTAGGAAATTGTTTG+AGG | 0.473394 | 8.3:+6959858 | MS.gene041817:CDS |
| CGGGTACTCTTCTCGGAGGG+AGG | 0.474423 | 8.3:-6957531 | None:intergenic |
| TTCCCTTGTCAATCTTGCCC+AGG | 0.474487 | 8.3:-6960080 | None:intergenic |
| TTTGACTGTGAATTTGGACT+TGG | 0.475255 | 8.3:+6957773 | MS.gene041817:CDS |
| AACGCTCGTGGTTCGCCGGC+CGG | 0.475760 | 8.3:+6957590 | MS.gene041817:CDS |
| GGTACTCTTCTCGGAGGGAG+GGG | 0.477660 | 8.3:-6957529 | None:intergenic |
| GATTCCATGAGAAATATTAC+CGG | 0.481747 | 8.3:+6962053 | MS.gene041817:CDS |
| TGAAAATGCATTCATTTGGC+AGG | 0.484233 | 8.3:+6958291 | MS.gene041817:CDS |
| TAGGTTCGCTTGGCATGTCT+GGG | 0.485244 | 8.3:+6960041 | MS.gene041817:CDS |
| GAGTCTGATTCGACTCTCCC+CGG | 0.486099 | 8.3:-6957738 | None:intergenic |
| AGATGAAGAAGGTGGAGGAG+AGG | 0.487422 | 8.3:-6957346 | None:intergenic |
| ACTTGCATTGCTTGAAGCTA+AGG | 0.488961 | 8.3:+6959615 | MS.gene041817:CDS |
| ATGTTGCTGCTTGGCATGGT+TGG | 0.489445 | 8.3:+6959494 | MS.gene041817:CDS |
| AGGCTTGGGGTTGGATGGAA+TGG | 0.489500 | 8.3:+6960844 | MS.gene041817:intron |
| GAGTCTCCTCAAACTGTCAA+TGG | 0.490117 | 8.3:-6961994 | None:intergenic |
| CTTGGCGTTGTATAAGGCTA+AGG | 0.495715 | 8.3:+6957791 | MS.gene041817:CDS |
| TCGTAACCTTTACTTCCAGC+AGG | 0.496782 | 8.3:+6961210 | MS.gene041817:CDS |
| TCGAAAGGTCTTCAATATTG+TGG | 0.498161 | 8.3:+6959568 | MS.gene041817:CDS |
| AACCAAACAGGTTGATGCCT+GGG | 0.503303 | 8.3:-6960237 | None:intergenic |
| TTCCAGTTGAACTTCCAGCT+TGG | 0.505485 | 8.3:-6962189 | None:intergenic |
| TTAAGCTATTGGCCTGAAGA+TGG | 0.505942 | 8.3:+6958172 | MS.gene041817:CDS |
| CAGGGACTCAACTTCAGTGT+TGG | 0.507530 | 8.3:+6957497 | MS.gene041817:CDS |
| GTTGCAGGCTTGGGGTTGGA+TGG | 0.508516 | 8.3:+6960839 | MS.gene041817:intron |
| CATGGGGTGTTCTGGAGCAG+AGG | 0.509511 | 8.3:+6961056 | MS.gene041817:CDS |
| AGCTAGAGAGATTTATGAGA+AGG | 0.510163 | 8.3:+6958249 | MS.gene041817:CDS |
| CTTGGAGATGAAGAAGGTGG+AGG | 0.513126 | 8.3:-6957351 | None:intergenic |
| AAGCCACTTACAAACCAAAC+AGG | 0.513611 | 8.3:-6960249 | None:intergenic |
| ATGGGGTGTTCTGGAGCAGA+GGG | 0.520442 | 8.3:+6961057 | MS.gene041817:CDS |
| CGATCCGGTAATATTTCTCA+TGG | 0.522147 | 8.3:-6962057 | None:intergenic |
| ATCCATAGATGTGTCCAAGC+TGG | 0.527168 | 8.3:+6962175 | MS.gene041817:CDS |
| TTTGAGGAGACTCCTGAAGA+TGG | 0.527639 | 8.3:+6962004 | MS.gene041817:CDS |
| TTGGGGTTGGATGGAATGGA+AGG | 0.528475 | 8.3:+6960848 | MS.gene041817:CDS |
| AAAGGTTCTTCAATTGATGT+CGG | 0.529046 | 8.3:+6957678 | MS.gene041817:CDS |
| AAACCAAACAGGTTGATGCC+TGG | 0.535498 | 8.3:-6960238 | None:intergenic |
| CGAATTTCTTCAGCACGCAC+AGG | 0.537682 | 8.3:-6961190 | None:intergenic |
| GAGCATCTGAATTGGATCCC+AGG | 0.540159 | 8.3:+6960220 | MS.gene041817:CDS |
| GTGGGAAGATGAAGAATGGA+AGG | 0.540617 | 8.3:-6957445 | None:intergenic |
| GGTTGGATGGAATGGAAGGA+AGG | 0.544841 | 8.3:+6960852 | MS.gene041817:CDS |
| CATCCCTTGGATTTAGAGCA+TGG | 0.545663 | 8.3:-6960122 | None:intergenic |
| TGAAGGAGAACAGCATCCCT+TGG | 0.546657 | 8.3:-6960135 | None:intergenic |
| GAGTGCTGCAAGGTGTCTCC+AGG | 0.548963 | 8.3:+6960935 | MS.gene041817:CDS |
| AAATGTTGCAGGCTTGGGGT+TGG | 0.552264 | 8.3:+6960835 | MS.gene041817:intron |
| ACTTAAATGTTGCAGGCTTG+GGG | 0.552801 | 8.3:+6960831 | MS.gene041817:intron |
| GGCTTGGGCTCAAATGGAGG+TGG | 0.554574 | 8.3:+6959819 | MS.gene041817:intron |
| AAGTTGTAGATGATGCTTCG+TGG | 0.557897 | 8.3:+6961940 | MS.gene041817:CDS |
| GGTAGGCTTTATGTTGCACT+CGG | 0.558214 | 8.3:+6958193 | MS.gene041817:CDS |
| ATAAGAAACATGTTGCTGCT+TGG | 0.562764 | 8.3:+6959485 | MS.gene041817:CDS |
| GCTAGAGAGATTTATGAGAA+GGG | 0.568643 | 8.3:+6958250 | MS.gene041817:CDS |
| GAACTTGGAGATGAAGAAGG+TGG | 0.568927 | 8.3:-6957354 | None:intergenic |
| AGTTGTAGATGATGCTTCGT+GGG | 0.575012 | 8.3:+6961941 | MS.gene041817:CDS |
| TCAAAGTTTGAGTCTTTCGG+TGG | 0.575726 | 8.3:-6957564 | None:intergenic |
| TCCTCAAACTGTCAATGGCA+GGG | 0.577336 | 8.3:-6961989 | None:intergenic |
| TAAGGCGAATAGATATCAGC+AGG | 0.578086 | 8.3:+6959633 | MS.gene041817:CDS |
| GTTATGTGACATGGATGACT+TGG | 0.580592 | 8.3:+6961140 | MS.gene041817:CDS |
| GTAGAACTTGGAGATGAAGA+AGG | 0.581057 | 8.3:-6957357 | None:intergenic |
| GGTGTTCTGGAGCAGAGGGT+TGG | 0.581149 | 8.3:+6961061 | MS.gene041817:CDS |
| GCATCACTGGAGGAAGATCA+AGG | 0.582111 | 8.3:+6961163 | MS.gene041817:CDS |
| TAGGCCATGCTCTAAATCCA+AGG | 0.584053 | 8.3:+6960118 | MS.gene041817:CDS |
| GCTATTGGCCTGAAGATGGT+AGG | 0.590366 | 8.3:+6958176 | MS.gene041817:CDS |
| TTATGAATAGAATGCAGTGC+AGG | 0.596113 | 8.3:+6960005 | MS.gene041817:intron |
| CGGTGAAAACTCCGGTGAGG+AGG | 0.598822 | 8.3:+6957620 | MS.gene041817:CDS |
| GCAAGGAATCTGCTTTCGAA+AGG | 0.604942 | 8.3:+6959553 | MS.gene041817:CDS |
| AAACTTTGATGGAACGCTCG+TGG | 0.605330 | 8.3:+6957578 | MS.gene041817:CDS |
| ATTCTCAGAGTTATGTGACA+TGG | 0.605787 | 8.3:+6961131 | MS.gene041817:CDS |
| AGCAGAGGAAATGCTTCTGA+AGG | 0.612307 | 8.3:+6957842 | MS.gene041817:CDS |
| CTATTAATGCAAGAGACTGA+AGG | 0.615485 | 8.3:-6960152 | None:intergenic |
| CTTTCGTTATCAAGAAGCAG+AGG | 0.617149 | 8.3:+6957827 | MS.gene041817:CDS |
| TGCACCGTGTTGCACTCTCA+GGG | 0.617357 | 8.3:+6957479 | MS.gene041817:CDS |
| AAGATGCCGATATTTGAACC+GGG | 0.617807 | 8.3:+6957720 | MS.gene041817:CDS |
| AAGGGTTGCCAGGCTACTCA+GGG | 0.619016 | 8.3:+6958268 | MS.gene041817:CDS |
| AAGGAAATATAACGAAGGCA+AGG | 0.619314 | 8.3:+6959536 | MS.gene041817:CDS |
| AGGGTAAAATGGGAACTTTG+AGG | 0.621281 | 8.3:-6957425 | None:intergenic |
| AGGAAAACTATCGTACCGCT+AGG | 0.622711 | 8.3:+6959845 | MS.gene041817:CDS |
| GCAGTTCTGGAGTTAAAGCA+AGG | 0.624049 | 8.3:+6959517 | MS.gene041817:CDS |
| TTTCACCGGAAAACTCCGGC+CGG | 0.625296 | 8.3:-6957605 | None:intergenic |
| AAACATGTTGCTGCTTGGCA+TGG | 0.627009 | 8.3:+6959490 | MS.gene041817:CDS |
| CGGTGCATGTGCAGTGAGGT+GGG | 0.629658 | 8.3:-6957463 | None:intergenic |
| ACGGTGCATGTGCAGTGAGG+TGG | 0.632473 | 8.3:-6957464 | None:intergenic |
| TTTCGGGTACTCTTCTCGGA+GGG | 0.633084 | 8.3:-6957534 | None:intergenic |
| GTAGGCTTTATGTTGCACTC+GGG | 0.637441 | 8.3:+6958194 | MS.gene041817:CDS |
| ATAGGCTTGGGCTCAAATGG+AGG | 0.638738 | 8.3:+6959816 | MS.gene041817:intron |
| ATTGTGAAAGAGGAAGCTAA+AGG | 0.639379 | 8.3:+6957660 | MS.gene041817:CDS |
| TAACCTGGGCAAGATTGACA+AGG | 0.641649 | 8.3:+6960077 | MS.gene041817:CDS |
| GATGACTTGGGCATCACTGG+AGG | 0.641810 | 8.3:+6961153 | MS.gene041817:CDS |
| TTTCTTATCAGCAACCGTTG+CGG | 0.644090 | 8.3:-6959470 | None:intergenic |
| AGGCCATGCTCTAAATCCAA+GGG | 0.645369 | 8.3:+6960119 | MS.gene041817:CDS |
| TGGGAAGATGAAGAATGGAA+GGG | 0.652700 | 8.3:-6957444 | None:intergenic |
| TTTCATATAATGCAGGCATG+GGG | 0.657586 | 8.3:+6961040 | MS.gene041817:intron |
| ATTTCGGGTACTCTTCTCGG+AGG | 0.661892 | 8.3:-6957535 | None:intergenic |
| TTCCGGTGAAAACTCCGGTG+AGG | 0.671694 | 8.3:+6957617 | MS.gene041817:CDS |
| ATATTTCTCATGGAATCAGG+TGG | 0.677602 | 8.3:-6962047 | None:intergenic |
| AAAGCAAGGAAATATAACGA+AGG | 0.687573 | 8.3:+6959531 | MS.gene041817:CDS |
| AACCTGGGCAAGATTGACAA+GGG | 0.688091 | 8.3:+6960078 | MS.gene041817:CDS |
| AGGTTCGCTTGGCATGTCTG+GGG | 0.690635 | 8.3:+6960042 | MS.gene041817:CDS |
| CGAACAGTGAGAGTGCTGCA+AGG | 0.690642 | 8.3:+6960925 | MS.gene041817:CDS |
| AGATGCCGATATTTGAACCG+GGG | 0.693362 | 8.3:+6957721 | MS.gene041817:CDS |
| TTATGTGACATGGATGACTT+GGG | 0.702914 | 8.3:+6961141 | MS.gene041817:CDS |
| CTGAGAATTTATATTCAACG+AGG | 0.719216 | 8.3:-6961116 | None:intergenic |
| AACCTCAAACAATTTCCTAG+CGG | 0.720299 | 8.3:-6959860 | None:intergenic |
| AACACGGTGCATGTGCAGTG+AGG | 0.727076 | 8.3:-6957467 | None:intergenic |
| GAGTCCCTGAGAGTGCAACA+CGG | 0.729774 | 8.3:-6957483 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAAAGTAACTTTTTTT+TGG | - | chr8.3:6958858-6958877 | None:intergenic | 10.0% |
| !!! | TCATATTTATTTTATCTAAT+AGG | + | chr8.3:6959798-6959817 | MS.gene041817:intron | 10.0% |
| !! | ATACAATGACATTATAAATA+AGG | - | chr8.3:6961852-6961871 | None:intergenic | 15.0% |
| !! | ATTATATTTCATTATGACTT+AGG | + | chr8.3:6959948-6959967 | MS.gene041817:intron | 15.0% |
| !! | GTATAGTTATCAATTTAATT+AGG | + | chr8.3:6961868-6961887 | MS.gene041817:intron | 15.0% |
| !! | GTCTATTTAAAAAAAAATTC+TGG | - | chr8.3:6961442-6961461 | None:intergenic | 15.0% |
| !!! | ATTTTAAATATTGTAGTCTA+GGG | + | chr8.3:6961353-6961372 | MS.gene041817:intron | 15.0% |
| !!! | ATTTTCAGAAAATCTTAAAA+TGG | - | chr8.3:6957885-6957904 | None:intergenic | 15.0% |
| !!! | TTTTCAGAAAATCTTAAAAT+GGG | - | chr8.3:6957884-6957903 | None:intergenic | 15.0% |
| !!! | TTTTGGTTACATAAAATTTA+GGG | - | chr8.3:6958841-6958860 | None:intergenic | 15.0% |
| !!! | TTTTTGGTTACATAAAATTT+AGG | - | chr8.3:6958842-6958861 | None:intergenic | 15.0% |
| !! | AATAAACTAACAACATCTTA+TGG | - | chr8.3:6958634-6958653 | None:intergenic | 20.0% |
| !! | AATAACCTAATAGTTTGATT+CGG | - | chr8.3:6959749-6959768 | None:intergenic | 20.0% |
| !! | AGTTATCAATTTAATTAGGA+GGG | + | chr8.3:6961872-6961891 | MS.gene041817:intron | 20.0% |
| !! | ATGAGAAAGATTACTTATTT+CGG | - | chr8.3:6959043-6959062 | None:intergenic | 20.0% |
| !! | CACAATAAACCATATAAAAA+AGG | - | chr8.3:6960350-6960369 | None:intergenic | 20.0% |
| !! | CTAGACTACAATATTTAAAA+TGG | - | chr8.3:6961354-6961373 | None:intergenic | 20.0% |
| !! | TAGTTATCAATTTAATTAGG+AGG | + | chr8.3:6961871-6961890 | MS.gene041817:intron | 20.0% |
| !! | TATAGATAGATGATCATATT+TGG | - | chr8.3:6961610-6961629 | None:intergenic | 20.0% |
| !! | TGTTTCAAAATGACTTAATA+AGG | + | chr8.3:6960465-6960484 | MS.gene041817:intron | 20.0% |
| !!! | AAACAATTTGACTTTCTTTT+TGG | + | chr8.3:6958707-6958726 | MS.gene041817:intron | 20.0% |
| !!! | AAATTTTGCTATATTTGAGT+CGG | + | chr8.3:6957901-6957920 | MS.gene041817:intron | 20.0% |
| !!! | AACAATTTGACTTTCTTTTT+GGG | + | chr8.3:6958708-6958727 | MS.gene041817:intron | 20.0% |
| !!! | CATTTTAAATATTGTAGTCT+AGG | + | chr8.3:6961352-6961371 | MS.gene041817:intron | 20.0% |
| !!! | GAACTTTTGTCAAAAAAAAA+AGG | - | chr8.3:6960323-6960342 | None:intergenic | 20.0% |
| !!! | TATCAATTGATAAAGCTTTT+CGG | - | chr8.3:6960905-6960924 | None:intergenic | 20.0% |
| !!! | TTATTTTATCTAATAGGCTT+GGG | + | chr8.3:6959804-6959823 | MS.gene041817:intron | 20.0% |
| !!! | TTTATTTTATCTAATAGGCT+TGG | + | chr8.3:6959803-6959822 | MS.gene041817:intron | 20.0% |
| !!! | TTTTAAATATTGTAGTCTAG+GGG | + | chr8.3:6961354-6961373 | MS.gene041817:intron | 20.0% |
| ! | AAGAAATTGAATATCAAGCT+AGG | - | chr8.3:6961011-6961030 | None:intergenic | 25.0% |
| ! | AGAAATAACTTACACATAAG+TGG | + | chr8.3:6958051-6958070 | MS.gene041817:intron | 25.0% |
| ! | ATATCATTGGATAAGTTAGA+GGG | + | chr8.3:6961514-6961533 | MS.gene041817:intron | 25.0% |
| ! | TAAACCATATAAAAAAGGAC+AGG | - | chr8.3:6960345-6960364 | None:intergenic | 25.0% |
| ! | TATCTTGAGAAAAAAAAGCT+GGG | + | chr8.3:6961714-6961733 | MS.gene041817:intron | 25.0% |
| ! | TCTCTATTAAGAAATCTTGA+TGG | + | chr8.3:6961640-6961659 | MS.gene041817:intron | 25.0% |
| ! | TGAATAATGATAGTAGTGAT+AGG | - | chr8.3:6960291-6960310 | None:intergenic | 25.0% |
| ! | TGAATTTGAAGAGATAGTTT+GGG | - | chr8.3:6957404-6957423 | None:intergenic | 25.0% |
| ! | TTGAATTTGAAGAGATAGTT+TGG | - | chr8.3:6957405-6957424 | None:intergenic | 25.0% |
| ! | TTTGTCAAAAAAAAAAGGAC+AGG | - | chr8.3:6960318-6960337 | None:intergenic | 25.0% |
| !! | TGGTGTGTAATTTTATGAAA+AGG | + | chr8.3:6960621-6960640 | MS.gene041817:intron | 25.0% |
| !!! | AACTACTTTTCATATAATGC+AGG | + | chr8.3:6961033-6961052 | MS.gene041817:intron | 25.0% |
| !!! | AATTTTGCTATATTTGAGTC+GGG | + | chr8.3:6957902-6957921 | MS.gene041817:intron | 25.0% |
| !!! | ATGCTTTAAAATGTTTCCAA+TGG | + | chr8.3:6961563-6961582 | MS.gene041817:intron | 25.0% |
| !!! | ATTAAGTCATTTTGAAACAC+TGG | - | chr8.3:6960464-6960483 | None:intergenic | 25.0% |
| !!! | GTGTGTATAGTTTTATTTGT+TGG | + | chr8.3:6960601-6960620 | MS.gene041817:intron | 25.0% |
| !!! | TGTGCACAAATTTTGAAATA+CGG | + | chr8.3:6961811-6961830 | MS.gene041817:intron | 25.0% |
| !!! | TTGTAGACTCTAGAATTATT+CGG | - | chr8.3:6961786-6961805 | None:intergenic | 25.0% |
| AAAAAATTCTGGCATGACTA+AGG | - | chr8.3:6961431-6961450 | None:intergenic | 30.0% | |
| AAAAGAAAATGGGAAATGTC+AGG | + | chr8.3:6959425-6959444 | MS.gene041817:CDS | 30.0% | |
| AAAGCAAGGAAATATAACGA+AGG | + | chr8.3:6959531-6959550 | MS.gene041817:CDS | 30.0% | |
| AAAGGTTCTTCAATTGATGT+CGG | + | chr8.3:6957678-6957697 | MS.gene041817:CDS | 30.0% | |
| AAATACGGGCATTATCATAT+TGG | + | chr8.3:6958383-6958402 | MS.gene041817:intron | 30.0% | |
| AATACGGGCATTATCATATT+GGG | + | chr8.3:6958384-6958403 | MS.gene041817:intron | 30.0% | |
| ACTTTAATTCATGTTTACCG+TGG | + | chr8.3:6960512-6960531 | MS.gene041817:intron | 30.0% | |
| AGTACATAATATCGAACTGT+CGG | - | chr8.3:6958565-6958584 | None:intergenic | 30.0% | |
| AGTTGTTTATCCAAACTAGT+TGG | + | chr8.3:6958920-6958939 | MS.gene041817:intron | 30.0% | |
| ATGAAAAGGAGAATGACTTA+GGG | + | chr8.3:6960635-6960654 | MS.gene041817:intron | 30.0% | |
| ATGTCCAATTAGCATATTCA+TGG | - | chr8.3:6960577-6960596 | None:intergenic | 30.0% | |
| ATGTGTTGTCTAATTCTATC+TGG | - | chr8.3:6958424-6958443 | None:intergenic | 30.0% | |
| CATCTTAACCCAAAATCTTA+AGG | + | chr8.3:6958441-6958460 | MS.gene041817:intron | 30.0% | |
| CTGAGAATTTATATTCAACG+AGG | - | chr8.3:6961119-6961138 | None:intergenic | 30.0% | |
| GATATCATTGGATAAGTTAG+AGG | + | chr8.3:6961513-6961532 | MS.gene041817:intron | 30.0% | |
| GATTCCATGAGAAATATTAC+CGG | + | chr8.3:6962053-6962072 | MS.gene041817:CDS | 30.0% | |
| GCAGGTAACTAATATGATTA+TGG | + | chr8.3:6961228-6961247 | MS.gene041817:intron | 30.0% | |
| GCTGTTCTTGAAAAGAAAAT+GGG | + | chr8.3:6959415-6959434 | MS.gene041817:CDS | 30.0% | |
| GTAATATTTCTCATGGAATC+AGG | - | chr8.3:6962053-6962072 | None:intergenic | 30.0% | |
| GTATCTTGAGAAAAAAAAGC+TGG | + | chr8.3:6961713-6961732 | MS.gene041817:intron | 30.0% | |
| GTTTCCATGAATATGCTAAT+TGG | + | chr8.3:6960570-6960589 | MS.gene041817:intron | 30.0% | |
| TAATCATATTAGTTACCTGC+TGG | - | chr8.3:6961228-6961247 | None:intergenic | 30.0% | |
| TATGAAAAGGAGAATGACTT+AGG | + | chr8.3:6960634-6960653 | MS.gene041817:intron | 30.0% | |
| TCTTACATTGGATGGAAAAA+TGG | - | chr8.3:6958521-6958540 | None:intergenic | 30.0% | |
| TGTGTTGTCTAATTCTATCT+GGG | - | chr8.3:6958423-6958442 | None:intergenic | 30.0% | |
| TGTTGAAGTTAGTTACAAGT+TGG | + | chr8.3:6958947-6958966 | MS.gene041817:intron | 30.0% | |
| TGTTTCCGAATCAAACTATT+AGG | + | chr8.3:6959741-6959760 | MS.gene041817:intron | 30.0% | |
| TTGAATATCAAGCTAGGTAA+AGG | - | chr8.3:6961005-6961024 | None:intergenic | 30.0% | |
| TTGTTCGTAGAAGGAAATTT+CGG | - | chr8.3:6962218-6962237 | None:intergenic | 30.0% | |
| ! | ACAAAATTTTGTCTCCAAGA+AGG | + | chr8.3:6962234-6962253 | MS.gene041817:CDS | 30.0% |
| ! | ACTCAATGCCTTAAGATTTT+GGG | - | chr8.3:6958452-6958471 | None:intergenic | 30.0% |
| ! | ACTTTACACTGTTCATGTTT+TGG | + | chr8.3:6960419-6960438 | MS.gene041817:intron | 30.0% |
| ! | GACAAAATTTTGTTCGTAGA+AGG | - | chr8.3:6962227-6962246 | None:intergenic | 30.0% |
| ! | GGAAGAAAACTTCTAAAGAT+AGG | + | chr8.3:6960099-6960118 | MS.gene041817:CDS | 30.0% |
| ! | TACATAAAATTTAGGGTGAG+CGG | - | chr8.3:6958834-6958853 | None:intergenic | 30.0% |
| ! | TACTCAATGCCTTAAGATTT+TGG | - | chr8.3:6958453-6958472 | None:intergenic | 30.0% |
| ! | TATGGCGTTTGTTAATTCAT+GGG | + | chr8.3:6961246-6961265 | MS.gene041817:intron | 30.0% |
| ! | TGATTTGGATGCTTTCATTA+TGG | + | chr8.3:6962145-6962164 | MS.gene041817:intron | 30.0% |
| ! | TTATGGCGTTTGTTAATTCA+TGG | + | chr8.3:6961245-6961264 | MS.gene041817:intron | 30.0% |
| ! | TTTTCATATAATGCAGGCAT+GGG | + | chr8.3:6961039-6961058 | MS.gene041817:intron | 30.0% |
| !! | AAGTTAGTTACAAGTTGGTT+AGG | + | chr8.3:6958952-6958971 | MS.gene041817:intron | 30.0% |
| !! | ATGGAATGGATTATTTGTGA+TGG | + | chr8.3:6958342-6958361 | MS.gene041817:intron | 30.0% |
| !! | TAAGCTTTTGACTGTGAATT+TGG | + | chr8.3:6957767-6957786 | MS.gene041817:CDS | 30.0% |
| !! | TATGATAATGCCCGTATTTT+AGG | - | chr8.3:6958382-6958401 | None:intergenic | 30.0% |
| !! | TGGAATGGATTATTTGTGAT+GGG | + | chr8.3:6958343-6958362 | MS.gene041817:intron | 30.0% |
| !! | TTCACAAGTGTTTTTCAGTT+AGG | - | chr8.3:6960688-6960707 | None:intergenic | 30.0% |
| !!! | AATTCTGTTTTTGCATGTGA+TGG | + | chr8.3:6958323-6958342 | MS.gene041817:intron | 30.0% |
| !!! | AGTTCCTGTCCTTTTTTATA+TGG | + | chr8.3:6960338-6960357 | MS.gene041817:intron | 30.0% |
| AAAACACTTGTGAAGCTGTT+TGG | + | chr8.3:6960694-6960713 | MS.gene041817:intron | 35.0% | |
| AAACACTTGTGAAGCTGTTT+GGG | + | chr8.3:6960695-6960714 | MS.gene041817:intron | 35.0% | |
| AACCTCAAACAATTTCCTAG+CGG | - | chr8.3:6959863-6959882 | None:intergenic | 35.0% | |
| AAGCATTTGTGAGACTGTTT+AGG | + | chr8.3:6958594-6958613 | MS.gene041817:intron | 35.0% | |
| AAGGAAATATAACGAAGGCA+AGG | + | chr8.3:6959536-6959555 | MS.gene041817:CDS | 35.0% | |
| AAGGTTCTTCAATTGATGTC+GGG | + | chr8.3:6957679-6957698 | MS.gene041817:CDS | 35.0% | |
| AAGTTCTCTTTGAACAGTGT+TGG | + | chr8.3:6959392-6959411 | MS.gene041817:intron | 35.0% | |
| ACTCTCAAACTCAAGCTTAT+TGG | + | chr8.3:6959119-6959138 | MS.gene041817:intron | 35.0% | |
| AGCTAGAGAGATTTATGAGA+AGG | + | chr8.3:6958249-6958268 | MS.gene041817:CDS | 35.0% | |
| AGGGTGAAAATGCATTCATT+TGG | + | chr8.3:6958287-6958306 | MS.gene041817:CDS | 35.0% | |
| AGTAAGAGTCTTACATTGGA+TGG | - | chr8.3:6958529-6958548 | None:intergenic | 35.0% | |
| AGTATAGCTTAGACATCACA+TGG | + | chr8.3:6959195-6959214 | MS.gene041817:intron | 35.0% | |
| AGTTCTCTTTGAACAGTGTT+GGG | + | chr8.3:6959393-6959412 | MS.gene041817:intron | 35.0% | |
| ATAAGAAACATGTTGCTGCT+TGG | + | chr8.3:6959485-6959504 | MS.gene041817:CDS | 35.0% | |
| ATATTTCTCATGGAATCAGG+TGG | - | chr8.3:6962050-6962069 | None:intergenic | 35.0% | |
| ATGAAGCAAGGAAATCAGAA+AGG | - | chr8.3:6959916-6959935 | None:intergenic | 35.0% | |
| ATTCTCAGAGTTATGTGACA+TGG | + | chr8.3:6961131-6961150 | MS.gene041817:CDS | 35.0% | |
| ATTGTGAAAGAGGAAGCTAA+AGG | + | chr8.3:6957660-6957679 | MS.gene041817:CDS | 35.0% | |
| ATTGTTTACTTTACACAGCC+TGG | + | chr8.3:6959229-6959248 | MS.gene041817:intron | 35.0% | |
| CACAGTCAAAAGCTTATCTT+TGG | - | chr8.3:6957763-6957782 | None:intergenic | 35.0% | |
| CATAAGCACTTAAATGTTGC+AGG | + | chr8.3:6960824-6960843 | MS.gene041817:intron | 35.0% | |
| CATGGTTGATTATTCTAGTG+AGG | + | chr8.3:6962088-6962107 | MS.gene041817:intron | 35.0% | |
| CCATCAAAGTTTGAGTCTTT+CGG | - | chr8.3:6957570-6957589 | None:intergenic | 35.0% | |
| CCTATTGAGCTAAAAAGATG+TGG | + | chr8.3:6961483-6961502 | MS.gene041817:intron | 35.0% | |
| CGCTTAAAGAAGCTACATAA+CGG | + | chr8.3:6958115-6958134 | MS.gene041817:intron | 35.0% | |
| CTATTAATGCAAGAGACTGA+AGG | - | chr8.3:6960155-6960174 | None:intergenic | 35.0% | |
| CTTTCGGTGGAATGTAATTT+CGG | - | chr8.3:6957554-6957573 | None:intergenic | 35.0% | |
| GAAGAATGGAAGGGTAAAAT+GGG | - | chr8.3:6957438-6957457 | None:intergenic | 35.0% | |
| GCTAGAGAGATTTATGAGAA+GGG | + | chr8.3:6958250-6958269 | MS.gene041817:CDS | 35.0% | |
| GCTTAAAGAAGCTACATAAC+GGG | + | chr8.3:6958116-6958135 | MS.gene041817:intron | 35.0% | |
| GGCTCGATATTTATTCAATC+AGG | + | chr8.3:6959654-6959673 | MS.gene041817:CDS | 35.0% | |
| GGCTGTTCTTGAAAAGAAAA+TGG | + | chr8.3:6959414-6959433 | MS.gene041817:CDS | 35.0% | |
| TCAACAATCTCCAACTAGTT+TGG | - | chr8.3:6958933-6958952 | None:intergenic | 35.0% | |
| TCGAAAGGTCTTCAATATTG+TGG | + | chr8.3:6959568-6959587 | MS.gene041817:CDS | 35.0% | |
| TGAAAATGCATTCATTTGGC+AGG | + | chr8.3:6958291-6958310 | MS.gene041817:CDS | 35.0% | |
| TGAAGAATGGAAGGGTAAAA+TGG | - | chr8.3:6957439-6957458 | None:intergenic | 35.0% | |
| TGAGTGAGAATTGTAGAACT+TGG | - | chr8.3:6957372-6957391 | None:intergenic | 35.0% | |
| TGTCTTCATCTGGTAACATT+AGG | + | chr8.3:6959289-6959308 | MS.gene041817:intron | 35.0% | |
| TGTGAGTAAGAGTCTTACAT+TGG | - | chr8.3:6958533-6958552 | None:intergenic | 35.0% | |
| TTATGAATAGAATGCAGTGC+AGG | + | chr8.3:6960005-6960024 | MS.gene041817:intron | 35.0% | |
| TTATGTGACATGGATGACTT+GGG | + | chr8.3:6961141-6961160 | MS.gene041817:CDS | 35.0% | |
| TTTCATATAATGCAGGCATG+GGG | + | chr8.3:6961040-6961059 | MS.gene041817:intron | 35.0% | |
| TTTCGGTGGAATGTAATTTC+GGG | - | chr8.3:6957553-6957572 | None:intergenic | 35.0% | |
| TTTGACTGTGAATTTGGACT+TGG | + | chr8.3:6957773-6957792 | MS.gene041817:CDS | 35.0% | |
| ! | AACCATGTTTTTCTTCGATC+CGG | - | chr8.3:6962075-6962094 | None:intergenic | 35.0% |
| ! | AAGCTTATTGGCTAATCAAC+TGG | + | chr8.3:6959131-6959150 | MS.gene041817:intron | 35.0% |
| ! | ACTGTTTTCATAAGCTTTCC+TGG | - | chr8.3:6960766-6960785 | None:intergenic | 35.0% |
| ! | CTACTATTCTAGAGAGCTAA+TGG | - | chr8.3:6958658-6958677 | None:intergenic | 35.0% |
| ! | CTTTTCATATAATGCAGGCA+TGG | + | chr8.3:6961038-6961057 | MS.gene041817:intron | 35.0% |
| ! | GTTGTATAAGGCTAAGGTTT+TGG | + | chr8.3:6957797-6957816 | MS.gene041817:CDS | 35.0% |
| ! | TGAGGATGATGATAATGATG+TGG | + | chr8.3:6962106-6962125 | MS.gene041817:intron | 35.0% |
| ! | TGTGGAGAGTATGATATCAT+TGG | + | chr8.3:6961501-6961520 | MS.gene041817:intron | 35.0% |
| ! | TTTTGTCTCCAAGAAGGATA+TGG | + | chr8.3:6962240-6962259 | MS.gene041817:CDS | 35.0% |
| !! | AGAAATTTTGCTGTGACTTG+AGG | + | chr8.3:6961748-6961767 | MS.gene041817:intron | 35.0% |
| !! | ATTATTTGTGATGGGTCATG+AGG | + | chr8.3:6958351-6958370 | MS.gene041817:intron | 35.0% |
| !! | CATGGAAGTGTTTAAGCTAT+TGG | + | chr8.3:6958161-6958180 | MS.gene041817:intron | 35.0% |
| !! | GAAGAGATAGTTTGGGTTTT+TGG | - | chr8.3:6957397-6957416 | None:intergenic | 35.0% |
| !! | GTTTGTTGTTGTCTTGTTCA+TGG | + | chr8.3:6958143-6958162 | MS.gene041817:intron | 35.0% |
| !! | TGTTTTTGCATGTGATGGAA+TGG | + | chr8.3:6958328-6958347 | MS.gene041817:intron | 35.0% |
| !! | TTATTTGTGATGGGTCATGA+GGG | + | chr8.3:6958352-6958371 | MS.gene041817:intron | 35.0% |
| !!! | ATGTTTTGGTTCCAACTTGA+AGG | + | chr8.3:6960433-6960452 | MS.gene041817:intron | 35.0% |
| !!! | CCACATCTTTTTAGCTCAAT+AGG | - | chr8.3:6961486-6961505 | None:intergenic | 35.0% |
| !!! | GCTTTTAGGATTACACTTTG+TGG | - | chr8.3:6959680-6959699 | None:intergenic | 35.0% |
| AAGATGCCGATATTTGAACC+GGG | + | chr8.3:6957720-6957739 | MS.gene041817:CDS | 40.0% | |
| AAGCCACTTACAAACCAAAC+AGG | - | chr8.3:6960252-6960271 | None:intergenic | 40.0% | |
| AAGCTAGAACTGTCTTCATC+TGG | + | chr8.3:6959279-6959298 | MS.gene041817:intron | 40.0% | |
| AAGCTGTTTGGGAGAGTTTA+TGG | + | chr8.3:6960706-6960725 | MS.gene041817:intron | 40.0% | |
| AAGTTGTAGATGATGCTTCG+TGG | + | chr8.3:6961940-6961959 | MS.gene041817:CDS | 40.0% | |
| AATGAGAAGTGAGCTTGACA+TGG | + | chr8.3:6960370-6960389 | MS.gene041817:intron | 40.0% | |
| ACATAAAGCCTACCATCTTC+AGG | - | chr8.3:6958187-6958206 | None:intergenic | 40.0% | |
| ACCTATAGTCAATCTACGTC+AGG | + | chr8.3:6961405-6961424 | MS.gene041817:intron | 40.0% | |
| ACTTAAATGTTGCAGGCTTG+GGG | + | chr8.3:6960831-6960850 | MS.gene041817:intron | 40.0% | |
| ACTTGCATTGCTTGAAGCTA+AGG | + | chr8.3:6959615-6959634 | MS.gene041817:CDS | 40.0% | |
| AGGGCTGCTAACATTTGAAA+TGG | + | chr8.3:6961891-6961910 | MS.gene041817:intron | 40.0% | |
| AGGGTAAAATGGGAACTTTG+AGG | - | chr8.3:6957428-6957447 | None:intergenic | 40.0% | |
| AGTTGTAGATGATGCTTCGT+GGG | + | chr8.3:6961941-6961960 | MS.gene041817:CDS | 40.0% | |
| ATCCTAAAAGCTGTGCTAGT+TGG | + | chr8.3:6959689-6959708 | MS.gene041817:CDS | 40.0% | |
| ATGAGGGGACTCCTAAAATA+CGG | + | chr8.3:6958368-6958387 | MS.gene041817:intron | 40.0% | |
| CACTTAAATGTTGCAGGCTT+GGG | + | chr8.3:6960830-6960849 | MS.gene041817:intron | 40.0% | |
| CATCAATCAGAATCCAGAGA+AGG | - | chr8.3:6960551-6960570 | None:intergenic | 40.0% | |
| CATCTGGTAACATTAGGAGT+GGG | + | chr8.3:6959295-6959314 | MS.gene041817:intron | 40.0% | |
| CATTGGATAAGTTAGAGGGA+AGG | + | chr8.3:6961518-6961537 | MS.gene041817:intron | 40.0% | |
| CATTTGTGAGACTGTTTAGG+AGG | + | chr8.3:6958597-6958616 | MS.gene041817:intron | 40.0% | |
| CCAAGGTAGAGAAGACATTT+AGG | - | chr8.3:6958798-6958817 | None:intergenic | 40.0% | |
| CCGAAAGACTCAAACTTTGA+TGG | + | chr8.3:6957567-6957586 | MS.gene041817:CDS | 40.0% | |
| CCTAAATGTCTTCTCTACCT+TGG | + | chr8.3:6958795-6958814 | MS.gene041817:intron | 40.0% | |
| CGATCCGGTAATATTTCTCA+TGG | - | chr8.3:6962060-6962079 | None:intergenic | 40.0% | |
| CTTCAAGCAATGCAAGTGTT+TGG | - | chr8.3:6959612-6959631 | None:intergenic | 40.0% | |
| CTTTCGTTATCAAGAAGCAG+AGG | + | chr8.3:6957827-6957846 | MS.gene041817:CDS | 40.0% | |
| GAAAGAAGTTGCTTGACCAT+TGG | - | chr8.3:6961582-6961601 | None:intergenic | 40.0% | |
| GAAGATGCCGATATTTGAAC+CGG | + | chr8.3:6957719-6957738 | MS.gene041817:CDS | 40.0% | |
| GGAGAAGGAAATTGTGAAAG+AGG | + | chr8.3:6957650-6957669 | MS.gene041817:CDS | 40.0% | |
| GTAGAACTTGGAGATGAAGA+AGG | - | chr8.3:6957360-6957379 | None:intergenic | 40.0% | |
| GTCCTAAAAATAGGTTCGCT+TGG | + | chr8.3:6960031-6960050 | MS.gene041817:CDS | 40.0% | |
| GTGGCACATTGAACGAATTT+GGG | - | chr8.3:6962031-6962050 | None:intergenic | 40.0% | |
| GTTATGTGACATGGATGACT+TGG | + | chr8.3:6961140-6961159 | MS.gene041817:CDS | 40.0% | |
| GTTGTCTAATTCTATCTGGG+TGG | - | chr8.3:6958420-6958439 | None:intergenic | 40.0% | |
| TAAGGCGAATAGATATCAGC+AGG | + | chr8.3:6959633-6959652 | MS.gene041817:CDS | 40.0% | |
| TACCGCTAGGAAATTGTTTG+AGG | + | chr8.3:6959858-6959877 | MS.gene041817:CDS | 40.0% | |
| TACCGGATCGAAGAAAAACA+TGG | + | chr8.3:6962070-6962089 | MS.gene041817:CDS | 40.0% | |
| TAGTTACCTGCTGGAAGTAA+AGG | - | chr8.3:6961219-6961238 | None:intergenic | 40.0% | |
| TCAAAGTTTGAGTCTTTCGG+TGG | - | chr8.3:6957567-6957586 | None:intergenic | 40.0% | |
| TCAAATAAGTCAAGCCAACC+AGG | - | chr8.3:6960661-6960680 | None:intergenic | 40.0% | |
| TCATCTGGTAACATTAGGAG+TGG | + | chr8.3:6959294-6959313 | MS.gene041817:intron | 40.0% | |
| TGAGACTGTTTAGGAGGTTA+CGG | + | chr8.3:6958603-6958622 | MS.gene041817:intron | 40.0% | |
| TGGATGCTTTCATTATGGAC+AGG | + | chr8.3:6962150-6962169 | MS.gene041817:intron | 40.0% | |
| TGGGAAGATGAAGAATGGAA+GGG | - | chr8.3:6957447-6957466 | None:intergenic | 40.0% | |
| TGTAGTCTAGGGGTGAAAAA+GGG | + | chr8.3:6961364-6961383 | MS.gene041817:intron | 40.0% | |
| TTGCTGAGTTCTATGAAGCA+AGG | - | chr8.3:6959928-6959947 | None:intergenic | 40.0% | |
| TTGTAAGTGGCTTACTCAGT+TGG | + | chr8.3:6960259-6960278 | MS.gene041817:intron | 40.0% | |
| TTGTAGTCTAGGGGTGAAAA+AGG | + | chr8.3:6961363-6961382 | MS.gene041817:intron | 40.0% | |
| TTTCTTATCAGCAACCGTTG+CGG | - | chr8.3:6959473-6959492 | None:intergenic | 40.0% | |
| TTTGGACTTGGCGTTGTATA+AGG | + | chr8.3:6957785-6957804 | MS.gene041817:CDS | 40.0% | |
| ! | GTAATTTCGGGTACTCTTCT+CGG | - | chr8.3:6957541-6957560 | None:intergenic | 40.0% |
| ! | TTAAGCTATTGGCCTGAAGA+TGG | + | chr8.3:6958172-6958191 | MS.gene041817:CDS | 40.0% |
| !! | CAACCTGTTTGGTTTGTAAG+TGG | + | chr8.3:6960246-6960265 | MS.gene041817:intron | 40.0% |
| !! | GTTCAAGAGAGCATCTGAAT+TGG | + | chr8.3:6960212-6960231 | MS.gene041817:CDS | 40.0% |
| !! | TATTTGTGATGGGTCATGAG+GGG | + | chr8.3:6958353-6958372 | MS.gene041817:intron | 40.0% |
| !! | TGCCAAGCGAACCTATTTTT+AGG | - | chr8.3:6960036-6960055 | None:intergenic | 40.0% |
| !!! | GGCATTTTTGAAGCTAACCT+GGG | + | chr8.3:6960063-6960082 | MS.gene041817:CDS | 40.0% |
| AAACAATGTCGCTCGGTTGA+TGG | - | chr8.3:6959726-6959745 | None:intergenic | 45.0% | |
| AAACTTTGATGGAACGCTCG+TGG | + | chr8.3:6957578-6957597 | MS.gene041817:CDS | 45.0% | |
| AACCTGGGCAAGATTGACAA+GGG | + | chr8.3:6960078-6960097 | MS.gene041817:CDS | 45.0% | |
| AAGGATGAGAGGAAAAGCCA+CGG | - | chr8.3:6960532-6960551 | None:intergenic | 45.0% | |
| ACGAATTTGGGTCCATCTTC+AGG | - | chr8.3:6962019-6962038 | None:intergenic | 45.0% | |
| ACTCTCCCCGGTTCAAATAT+CGG | - | chr8.3:6957729-6957748 | None:intergenic | 45.0% | |
| AGAATCCAGAGAAGGATGAG+AGG | - | chr8.3:6960543-6960562 | None:intergenic | 45.0% | |
| AGATGCCGATATTTGAACCG+GGG | + | chr8.3:6957721-6957740 | MS.gene041817:CDS | 45.0% | |
| AGCAGAGGAAATGCTTCTGA+AGG | + | chr8.3:6957842-6957861 | MS.gene041817:CDS | 45.0% | |
| AGGAAAACTATCGTACCGCT+AGG | + | chr8.3:6959845-6959864 | MS.gene041817:CDS | 45.0% | |
| ATCCATAGATGTGTCCAAGC+TGG | + | chr8.3:6962175-6962194 | MS.gene041817:CDS | 45.0% | |
| CGATGACAGCGAGTTTGATT+TGG | + | chr8.3:6962130-6962149 | MS.gene041817:intron | 45.0% | |
| CTAATAGGCTTGGGCTCAAA+TGG | + | chr8.3:6959813-6959832 | MS.gene041817:intron | 45.0% | |
| CTTGGCGTTGTATAAGGCTA+AGG | + | chr8.3:6957791-6957810 | MS.gene041817:CDS | 45.0% | |
| GAACTTGGAGATGAAGAAGG+TGG | - | chr8.3:6957357-6957376 | None:intergenic | 45.0% | |
| GAGTCTCCTCAAACTGTCAA+TGG | - | chr8.3:6961997-6962016 | None:intergenic | 45.0% | |
| GATTCGGAAACAATGTCGCT+CGG | - | chr8.3:6959733-6959752 | None:intergenic | 45.0% | |
| GATTGACTATAGGTCCCCAT+CGG | - | chr8.3:6961399-6961418 | None:intergenic | 45.0% | |
| GATTTATGAGAAGGGTTGCC+AGG | + | chr8.3:6958258-6958277 | MS.gene041817:CDS | 45.0% | |
| GCAAGGAATCTGCTTTCGAA+AGG | + | chr8.3:6959553-6959572 | MS.gene041817:CDS | 45.0% | |
| GCACTTAAATGTTGCAGGCT+TGG | + | chr8.3:6960829-6960848 | MS.gene041817:intron | 45.0% | |
| GCCTGACGTAGATTGACTAT+AGG | - | chr8.3:6961409-6961428 | None:intergenic | 45.0% | |
| GGTGGCACATTGAACGAATT+TGG | - | chr8.3:6962032-6962051 | None:intergenic | 45.0% | |
| GTCTTCTCTACCTTGGACAA+GGG | + | chr8.3:6958802-6958821 | MS.gene041817:intron | 45.0% | |
| GTGGGAAGATGAAGAATGGA+AGG | - | chr8.3:6957448-6957467 | None:intergenic | 45.0% | |
| TAACCTGGGCAAGATTGACA+AGG | + | chr8.3:6960077-6960096 | MS.gene041817:CDS | 45.0% | |
| TCATATGCATGCATGTCACC+TGG | - | chr8.3:6960956-6960975 | None:intergenic | 45.0% | |
| TCCTCAAACTGTCAATGGCA+GGG | - | chr8.3:6961992-6962011 | None:intergenic | 45.0% | |
| TCGTAACCTTTACTTCCAGC+AGG | + | chr8.3:6961210-6961229 | MS.gene041817:CDS | 45.0% | |
| TGAGGAGGTGAAAAAGGAGA+AGG | + | chr8.3:6957635-6957654 | MS.gene041817:CDS | 45.0% | |
| TGAGGGGACTCCTAAAATAC+GGG | + | chr8.3:6958369-6958388 | MS.gene041817:intron | 45.0% | |
| TGAGGTGGGAAGATGAAGAA+TGG | - | chr8.3:6957452-6957471 | None:intergenic | 45.0% | |
| TGCAGGCGAGTCCTAAAAAT+AGG | + | chr8.3:6960022-6960041 | MS.gene041817:CDS | 45.0% | |
| TGTCTTCTCTACCTTGGACA+AGG | + | chr8.3:6958801-6958820 | MS.gene041817:intron | 45.0% | |
| TTCCAGCTTGGACACATCTA+TGG | - | chr8.3:6962180-6962199 | None:intergenic | 45.0% | |
| TTCCAGTTGAACTTCCAGCT+TGG | - | chr8.3:6962192-6962211 | None:intergenic | 45.0% | |
| TTTGAGGAGACTCCTGAAGA+TGG | + | chr8.3:6962004-6962023 | MS.gene041817:CDS | 45.0% | |
| ! | AAACATGTTGCTGCTTGGCA+TGG | + | chr8.3:6959490-6959509 | MS.gene041817:CDS | 45.0% |
| ! | AGAACTTTTCGATGCCGCAA+CGG | + | chr8.3:6959456-6959475 | MS.gene041817:CDS | 45.0% |
| ! | AGAGGAAATGCTTCTGAAGG+TGG | + | chr8.3:6957845-6957864 | MS.gene041817:intron | 45.0% |
| ! | AGATGATGCTTCGTGGGTTA+TGG | + | chr8.3:6961947-6961966 | MS.gene041817:CDS | 45.0% |
| ! | AGCCAACTAGCACAGCTTTT+AGG | - | chr8.3:6959694-6959713 | None:intergenic | 45.0% |
| ! | AGGAAATGCTTCTGAAGGTG+GGG | + | chr8.3:6957847-6957866 | MS.gene041817:intron | 45.0% |
| ! | AGGCCATGCTCTAAATCCAA+GGG | + | chr8.3:6960119-6960138 | MS.gene041817:CDS | 45.0% |
| ! | CATCCCTTGGATTTAGAGCA+TGG | - | chr8.3:6960125-6960144 | None:intergenic | 45.0% |
| ! | CTTTTCCTCTCATCCTTCTC+TGG | + | chr8.3:6960535-6960554 | MS.gene041817:intron | 45.0% |
| ! | GAGGAAATGCTTCTGAAGGT+GGG | + | chr8.3:6957846-6957865 | MS.gene041817:intron | 45.0% |
| ! | GAGTTTTCACCGGAAAACTC+CGG | - | chr8.3:6957612-6957631 | None:intergenic | 45.0% |
| ! | GAGTTTTCCGGTGAAAACTC+CGG | + | chr8.3:6957612-6957631 | MS.gene041817:CDS | 45.0% |
| ! | GATGATGCTTCGTGGGTTAT+GGG | + | chr8.3:6961948-6961967 | MS.gene041817:CDS | 45.0% |
| ! | GGTAGGCTTTATGTTGCACT+CGG | + | chr8.3:6958193-6958212 | MS.gene041817:CDS | 45.0% |
| ! | GTAGGCTTTATGTTGCACTC+GGG | + | chr8.3:6958194-6958213 | MS.gene041817:CDS | 45.0% |
| ! | TAGGCCATGCTCTAAATCCA+AGG | + | chr8.3:6960118-6960137 | MS.gene041817:CDS | 45.0% |
| !! | AAACCAAACAGGTTGATGCC+TGG | - | chr8.3:6960241-6960260 | None:intergenic | 45.0% |
| !! | AACCAAACAGGTTGATGCCT+GGG | - | chr8.3:6960240-6960259 | None:intergenic | 45.0% |
| !! | CACTGGTTCTTCCTTCAAGT+TGG | - | chr8.3:6960447-6960466 | None:intergenic | 45.0% |
| !! | GCAGTTCTGGAGTTAAAGCA+AGG | + | chr8.3:6959517-6959536 | MS.gene041817:CDS | 45.0% |
| !! | GGCTCAAAGAGCACTTACAA+AGG | - | chr8.3:6958777-6958796 | None:intergenic | 45.0% |
| !!! | AGCTTTTTCAGCTTCTCTCC+AGG | + | chr8.3:6960745-6960764 | MS.gene041817:intron | 45.0% |
| !!! | GGGCATTTTTGAAGCTAACC+TGG | + | chr8.3:6960062-6960081 | MS.gene041817:CDS | 45.0% |
| AAATGTTGCAGGCTTGGGGT+TGG | + | chr8.3:6960835-6960854 | MS.gene041817:intron | 50.0% | |
| AAGGAGAATGACTTAGGGCC+TGG | + | chr8.3:6960640-6960659 | MS.gene041817:intron | 50.0% | |
| ACCCTGCCATTGACAGTTTG+AGG | + | chr8.3:6961988-6962007 | MS.gene041817:CDS | 50.0% | |
| AGAATGACTTAGGGCCTGGT+TGG | + | chr8.3:6960644-6960663 | MS.gene041817:intron | 50.0% | |
| AGATGAAGAAGGTGGAGGAG+AGG | - | chr8.3:6957349-6957368 | None:intergenic | 50.0% | |
| ATAGGCTTGGGCTCAAATGG+AGG | + | chr8.3:6959816-6959835 | MS.gene041817:intron | 50.0% | |
| ATAGGTTCGCTTGGCATGTC+TGG | + | chr8.3:6960040-6960059 | MS.gene041817:CDS | 50.0% | |
| ATCCCAGGCATCAACCTGTT+TGG | + | chr8.3:6960235-6960254 | MS.gene041817:CDS | 50.0% | |
| CAGGGACTCAACTTCAGTGT+TGG | + | chr8.3:6957497-6957516 | MS.gene041817:CDS | 50.0% | |
| CGAATTTCTTCAGCACGCAC+AGG | - | chr8.3:6961193-6961212 | None:intergenic | 50.0% | |
| CTCCTCAAACTGTCAATGGC+AGG | - | chr8.3:6961993-6962012 | None:intergenic | 50.0% | |
| CTTGGAGATGAAGAAGGTGG+AGG | - | chr8.3:6957354-6957373 | None:intergenic | 50.0% | |
| CTTGGTCGCCATATCCTTCT+TGG | - | chr8.3:6962251-6962270 | None:intergenic | 50.0% | |
| GAGCATCTGAATTGGATCCC+AGG | + | chr8.3:6960220-6960239 | MS.gene041817:CDS | 50.0% | |
| GATGAAGAAGGTGGAGGAGA+GGG | - | chr8.3:6957348-6957367 | None:intergenic | 50.0% | |
| GCATCACTGGAGGAAGATCA+AGG | + | chr8.3:6961163-6961182 | MS.gene041817:CDS | 50.0% | |
| GGTTGGATGGAATGGAAGGA+AGG | + | chr8.3:6960852-6960871 | MS.gene041817:CDS | 50.0% | |
| GTCCAAGCTGGAAGTTCAAC+TGG | + | chr8.3:6962187-6962206 | MS.gene041817:CDS | 50.0% | |
| TAGGTTCGCTTGGCATGTCT+GGG | + | chr8.3:6960041-6960060 | MS.gene041817:CDS | 50.0% | |
| TGAAGGAGAACAGCATCCCT+TGG | - | chr8.3:6960138-6960157 | None:intergenic | 50.0% | |
| TTCCCTTGTCAATCTTGCCC+AGG | - | chr8.3:6960083-6960102 | None:intergenic | 50.0% | |
| TTGGGGTTGGATGGAATGGA+AGG | + | chr8.3:6960848-6960867 | MS.gene041817:CDS | 50.0% | |
| ! | ATGGATGACTTGGGCATCAC+TGG | + | chr8.3:6961150-6961169 | MS.gene041817:CDS | 50.0% |
| ! | ATGTTGCTGCTTGGCATGGT+TGG | + | chr8.3:6959494-6959513 | MS.gene041817:CDS | 50.0% |
| ! | ATTTCGGGTACTCTTCTCGG+AGG | - | chr8.3:6957538-6957557 | None:intergenic | 50.0% |
| ! | CATTTTCACCCTGAGTAGCC+TGG | - | chr8.3:6958279-6958298 | None:intergenic | 50.0% |
| ! | CTAGCTTGTACCAGCCTCAA+AGG | - | chr8.3:6959266-6959285 | None:intergenic | 50.0% |
| ! | GCAGAGGGTTGGCAATCTTT+CGG | + | chr8.3:6961072-6961091 | MS.gene041817:CDS | 50.0% |
| ! | GCTATTGGCCTGAAGATGGT+AGG | + | chr8.3:6958176-6958195 | MS.gene041817:CDS | 50.0% |
| ! | TGTTGCTGCTTGGCATGGTT+GGG | + | chr8.3:6959495-6959514 | MS.gene041817:CDS | 50.0% |
| ! | TTTCGGGTACTCTTCTCGGA+GGG | - | chr8.3:6957537-6957556 | None:intergenic | 50.0% |
| !! | CTCCTTTTTCACCTCCTCAC+CGG | - | chr8.3:6957634-6957653 | None:intergenic | 50.0% |
| AAAAGGGTCAGACCGACCGA+TGG | + | chr8.3:6961380-6961399 | MS.gene041817:intron | 55.0% | |
| AAAGGGTCAGACCGACCGAT+GGG | + | chr8.3:6961381-6961400 | MS.gene041817:intron | 55.0% | |
| AACACGGTGCATGTGCAGTG+AGG | - | chr8.3:6957470-6957489 | None:intergenic | 55.0% | |
| AAGGGTTGCCAGGCTACTCA+GGG | + | chr8.3:6958268-6958287 | MS.gene041817:CDS | 55.0% | |
| AGGCTTGGGGTTGGATGGAA+TGG | + | chr8.3:6960844-6960863 | MS.gene041817:intron | 55.0% | |
| AGGTTCGCTTGGCATGTCTG+GGG | + | chr8.3:6960042-6960061 | MS.gene041817:CDS | 55.0% | |
| ATGCACCGTGTTGCACTCTC+AGG | + | chr8.3:6957478-6957497 | MS.gene041817:CDS | 55.0% | |
| CTCCGGTGAGGAGGTGAAAA+AGG | + | chr8.3:6957629-6957648 | MS.gene041817:CDS | 55.0% | |
| GACTATAGGTCCCCATCGGT+CGG | - | chr8.3:6961395-6961414 | None:intergenic | 55.0% | |
| GGCTCAAATGGAGGTGGAAC+AGG | + | chr8.3:6959825-6959844 | MS.gene041817:CDS | 55.0% | |
| GTACCAGCCTCAAAGGCCTT+AGG | - | chr8.3:6959259-6959278 | None:intergenic | 55.0% | |
| TACACAGCCTGGCATGCCTA+AGG | + | chr8.3:6959240-6959259 | MS.gene041817:intron | 55.0% | |
| TCAAAGGCCTTAGGCATGCC+AGG | - | chr8.3:6959250-6959269 | None:intergenic | 55.0% | |
| TGCACCGTGTTGCACTCTCA+GGG | + | chr8.3:6957479-6957498 | MS.gene041817:CDS | 55.0% | |
| TGGCATGCCTAAGGCCTTTG+AGG | + | chr8.3:6959249-6959268 | MS.gene041817:intron | 55.0% | |
| TTCCGGTGAAAACTCCGGTG+AGG | + | chr8.3:6957617-6957636 | MS.gene041817:CDS | 55.0% | |
| TTGGCATGGTTGGGCAGTTC+TGG | + | chr8.3:6959504-6959523 | MS.gene041817:CDS | 55.0% | |
| TTTCACCGGAAAACTCCGGC+CGG | - | chr8.3:6957608-6957627 | None:intergenic | 55.0% | |
| ! | AATGCAGGCATGGGGTGTTC+TGG | + | chr8.3:6961048-6961067 | MS.gene041817:intron | 55.0% |
| ! | CTCCTCACCGGAGTTTTCAC+CGG | - | chr8.3:6957622-6957641 | None:intergenic | 55.0% |
| ! | GAGTCCCTGAGAGTGCAACA+CGG | - | chr8.3:6957486-6957505 | None:intergenic | 55.0% |
| ! | GAGTCTGATTCGACTCTCCC+CGG | - | chr8.3:6957741-6957760 | None:intergenic | 55.0% |
| ! | GATGACTTGGGCATCACTGG+AGG | + | chr8.3:6961153-6961172 | MS.gene041817:CDS | 55.0% |
| !! | ATGCCTAAGGCCTTTGAGGC+TGG | + | chr8.3:6959253-6959272 | MS.gene041817:intron | 55.0% |
| !! | ATGGGGTGTTCTGGAGCAGA+GGG | + | chr8.3:6961057-6961076 | MS.gene041817:CDS | 55.0% |
| !! | CCTTCCTCCAAGAGCACTAG+CGG | - | chr8.3:6958742-6958761 | None:intergenic | 55.0% |
| !! | CGAACAGTGAGAGTGCTGCA+AGG | + | chr8.3:6960925-6960944 | MS.gene041817:CDS | 55.0% |
| !! | CTTCCTCCAAGAGCACTAGC+GGG | - | chr8.3:6958741-6958760 | None:intergenic | 55.0% |
| !! | TTCCTCCAAGAGCACTAGCG+GGG | - | chr8.3:6958740-6958759 | None:intergenic | 55.0% |
| AAGGGTCAGACCGACCGATG+GGG | + | chr8.3:6961382-6961401 | MS.gene041817:intron | 60.0% | |
| ACGGTGCATGTGCAGTGAGG+TGG | - | chr8.3:6957467-6957486 | None:intergenic | 60.0% | |
| ATGGAACGCTCGTGGTTCGC+CGG | + | chr8.3:6957586-6957605 | MS.gene041817:CDS | 60.0% | |
| CCGCTAGTGCTCTTGGAGGA+AGG | + | chr8.3:6958739-6958758 | MS.gene041817:intron | 60.0% | |
| CGGTGAAAACTCCGGTGAGG+AGG | + | chr8.3:6957620-6957639 | MS.gene041817:CDS | 60.0% | |
| CGGTGCATGTGCAGTGAGGT+GGG | - | chr8.3:6957466-6957485 | None:intergenic | 60.0% | |
| GAAGGGTTGCCAGGCTACTC+AGG | + | chr8.3:6958267-6958286 | MS.gene041817:CDS | 60.0% | |
| GCGGATGATGCCCTTGTCCA+AGG | - | chr8.3:6958815-6958834 | None:intergenic | 60.0% | |
| GGCTTGGGCTCAAATGGAGG+TGG | + | chr8.3:6959819-6959838 | MS.gene041817:intron | 60.0% | |
| GGGTACTCTTCTCGGAGGGA+GGG | - | chr8.3:6957533-6957552 | None:intergenic | 60.0% | |
| GGTACTCTTCTCGGAGGGAG+GGG | - | chr8.3:6957532-6957551 | None:intergenic | 60.0% | |
| GTTGCAGGCTTGGGGTTGGA+TGG | + | chr8.3:6960839-6960858 | MS.gene041817:intron | 60.0% | |
| TTGAGCCCCGCTAGTGCTCT+TGG | + | chr8.3:6958732-6958751 | MS.gene041817:intron | 60.0% | |
| ! | GAGTGCTGCAAGGTGTCTCC+AGG | + | chr8.3:6960935-6960954 | MS.gene041817:CDS | 60.0% |
| !! | CATGGGGTGTTCTGGAGCAG+AGG | + | chr8.3:6961056-6961075 | MS.gene041817:CDS | 60.0% |
| !! | GGTGTTCTGGAGCAGAGGGT+TGG | + | chr8.3:6961061-6961080 | MS.gene041817:CDS | 60.0% |
| AGCCCCGCTAGTGCTCTTGG+AGG | + | chr8.3:6958735-6958754 | MS.gene041817:intron | 65.0% | |
| CGGGTACTCTTCTCGGAGGG+AGG | - | chr8.3:6957534-6957553 | None:intergenic | 65.0% | |
| ! | GTTCGCCGGCCGGAGTTTTC+CGG | + | chr8.3:6957600-6957619 | MS.gene041817:CDS | 65.0% |
| AACGCTCGTGGTTCGCCGGC+CGG | + | chr8.3:6957590-6957609 | MS.gene041817:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 6957333 | 6962273 | 6957333 | ID=MS.gene041817 |
| chr8.3 | mRNA | 6957333 | 6962273 | 6957333 | ID=MS.gene041817.t1;Parent=MS.gene041817 |
| chr8.3 | exon | 6957333 | 6957863 | 6957333 | ID=MS.gene041817.t1.exon1;Parent=MS.gene041817.t1 |
| chr8.3 | CDS | 6957333 | 6957863 | 6957333 | ID=cds.MS.gene041817.t1;Parent=MS.gene041817.t1 |
| chr8.3 | exon | 6958169 | 6958312 | 6958169 | ID=MS.gene041817.t1.exon2;Parent=MS.gene041817.t1 |
| chr8.3 | CDS | 6958169 | 6958312 | 6958169 | ID=cds.MS.gene041817.t1;Parent=MS.gene041817.t1 |
| chr8.3 | exon | 6959409 | 6959714 | 6959409 | ID=MS.gene041817.t1.exon3;Parent=MS.gene041817.t1 |
| chr8.3 | CDS | 6959409 | 6959714 | 6959409 | ID=cds.MS.gene041817.t1;Parent=MS.gene041817.t1 |
| chr8.3 | exon | 6959820 | 6959879 | 6959820 | ID=MS.gene041817.t1.exon4;Parent=MS.gene041817.t1 |
| chr8.3 | CDS | 6959820 | 6959879 | 6959820 | ID=cds.MS.gene041817.t1;Parent=MS.gene041817.t1 |
| chr8.3 | exon | 6960015 | 6960260 | 6960015 | ID=MS.gene041817.t1.exon5;Parent=MS.gene041817.t1 |
| chr8.3 | CDS | 6960015 | 6960260 | 6960015 | ID=cds.MS.gene041817.t1;Parent=MS.gene041817.t1 |
| chr8.3 | exon | 6960846 | 6960956 | 6960846 | ID=MS.gene041817.t1.exon6;Parent=MS.gene041817.t1 |
| chr8.3 | CDS | 6960846 | 6960956 | 6960846 | ID=cds.MS.gene041817.t1;Parent=MS.gene041817.t1 |
| chr8.3 | exon | 6961055 | 6961231 | 6961055 | ID=MS.gene041817.t1.exon7;Parent=MS.gene041817.t1 |
| chr8.3 | CDS | 6961055 | 6961231 | 6961055 | ID=cds.MS.gene041817.t1;Parent=MS.gene041817.t1 |
| chr8.3 | exon | 6961933 | 6962091 | 6961933 | ID=MS.gene041817.t1.exon8;Parent=MS.gene041817.t1 |
| chr8.3 | CDS | 6961933 | 6962091 | 6961933 | ID=cds.MS.gene041817.t1;Parent=MS.gene041817.t1 |
| chr8.3 | exon | 6962172 | 6962273 | 6962172 | ID=MS.gene041817.t1.exon9;Parent=MS.gene041817.t1 |
| chr8.3 | CDS | 6962172 | 6962273 | 6962172 | ID=cds.MS.gene041817.t1;Parent=MS.gene041817.t1 |
| Gene Sequence |
| Protein sequence |
