Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042056.t1 | XP_013458703.1 | 96.4 | 550 | 15 | 2 | 1 | 550 | 1 | 545 | 2.30E-292 | 1014.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042056.t1 | A7HYV8 | 38.7 | 478 | 264 | 9 | 41 | 511 | 5 | 460 | 6.6e-83 | 309.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042056.t1 | A0A072V3J6 | 96.4 | 550 | 15 | 2 | 1 | 550 | 1 | 545 | 1.6e-292 | 1014.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042056 | MS.gene057884 | PPI |
| MS.gene81615 | MS.gene042056 | PPI |
| MS.gene81622 | MS.gene042056 | PPI |
| MS.gene016743 | MS.gene042056 | PPI |
| MS.gene016742 | MS.gene042056 | PPI |
| MS.gene042056 | MS.gene070509 | PPI |
| MS.gene042056 | MS.gene67840 | PPI |
| MS.gene042056 | MS.gene81617 | PPI |
| MS.gene042056 | MS.gene37911 | PPI |
| MS.gene042056 | MS.gene070503 | PPI |
| MS.gene042056 | MS.gene070507 | PPI |
| MS.gene042056 | MS.gene81620 | PPI |
| MS.gene042056 | MS.gene057883 | PPI |
| MS.gene042056 | MS.gene016758 | PPI |
| MS.gene070505 | MS.gene042056 | PPI |
| MS.gene057886 | MS.gene042056 | PPI |
| MS.gene042056 | MS.gene070492 | PPI |
| MS.gene042056 | MS.gene070510 | PPI |
| MS.gene042056 | MS.gene070511 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042056.t1 | MTR_4g134500 | 96.364 | 550 | 15 | 2 | 1 | 550 | 1 | 545 | 0.0 | 1073 |
| MS.gene042056.t1 | MTR_4g065030 | 31.502 | 546 | 296 | 14 | 22 | 527 | 119 | 626 | 1.11e-62 | 217 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042056.t1 | AT5G39960 | 69.903 | 515 | 149 | 2 | 28 | 540 | 107 | 617 | 0.0 | 729 |
| MS.gene042056.t1 | AT3G12080 | 30.871 | 528 | 294 | 15 | 38 | 529 | 158 | 650 | 2.67e-55 | 197 |
| MS.gene042056.t1 | AT3G12080 | 30.425 | 447 | 242 | 14 | 38 | 450 | 158 | 569 | 2.80e-40 | 154 |
Find 138 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTGCCAGAGTGGCTTTA+AGG | 0.168813 | 8.3:+275709 | MS.gene042056:CDS |
| TCACTTGCGTTTCAGAGTTT+TGG | 0.256650 | 8.3:+271420 | MS.gene042056:CDS |
| GAACGCTGCATGATCCTTAT+AGG | 0.273393 | 8.3:-275642 | None:intergenic |
| TTGGAAGCTGAAGCCACTTC+TGG | 0.280926 | 8.3:+271454 | MS.gene042056:CDS |
| CTTGAAAGATGACTTTGATT+TGG | 0.289666 | 8.3:+275611 | MS.gene042056:CDS |
| TCAAGGAAGAACTATTTATC+TGG | 0.295908 | 8.3:+272125 | MS.gene042056:CDS |
| CTAATGAAATGTCCCGTTTA+GGG | 0.297260 | 8.3:+271689 | MS.gene042056:CDS |
| GCTAATGAAATGTCCCGTTT+AGG | 0.315515 | 8.3:+271688 | MS.gene042056:CDS |
| GAATCACTCTTTGATGTTGA+TGG | 0.322033 | 8.3:+271649 | MS.gene042056:CDS |
| TGAACAAGATGGATCTTCTA+AGG | 0.322228 | 8.3:+274844 | MS.gene042056:CDS |
| CTCCCCACCGTCATCATTCT+CGG | 0.325989 | 8.3:+271274 | MS.gene042056:CDS |
| TTGATCAGGAAGTTGGAAAA+TGG | 0.328408 | 8.3:+271575 | MS.gene042056:CDS |
| ATTTGGGTGGAATTCCTATA+AGG | 0.329672 | 8.3:+275628 | MS.gene042056:CDS |
| CAGTGAAAGAAGCAGTTCTA+TGG | 0.344662 | 8.3:-271486 | None:intergenic |
| GAAATGTCCCGTTTAGGGTT+TGG | 0.350058 | 8.3:+271694 | MS.gene042056:CDS |
| CGTGAAGGAGTCGCTAAATT+AGG | 0.361035 | 8.3:+271397 | MS.gene042056:CDS |
| AATGAATACTACTGGGATTC+CGG | 0.364626 | 8.3:-275240 | None:intergenic |
| AAGGTTGATTTACCAACATT+GGG | 0.373746 | 8.3:-272015 | None:intergenic |
| TTGAAAGATGACTTTGATTT+GGG | 0.374915 | 8.3:+275612 | MS.gene042056:CDS |
| TCCCTCTTCCACGGCTCGTC+TGG | 0.378815 | 8.3:-274802 | None:intergenic |
| AGAACTCAGTTTGAATTTCA+AGG | 0.382260 | 8.3:+272108 | MS.gene042056:CDS |
| TGAGTAAAATACTTGATCTT+AGG | 0.382571 | 8.3:-275501 | None:intergenic |
| GATTTATTCATGACAAGAAT+AGG | 0.383461 | 8.3:-271625 | None:intergenic |
| AGGTTATGAGCAGACATTCT+TGG | 0.386318 | 8.3:+275460 | MS.gene042056:intron |
| TCTCTTGTGAGACCAGCTTC+AGG | 0.388690 | 8.3:-272078 | None:intergenic |
| AAGTCTGACAAGAGAGATAA+AGG | 0.391419 | 8.3:+275735 | MS.gene042056:CDS |
| CAAATCAAAGTCATCTTTCA+AGG | 0.392302 | 8.3:-275610 | None:intergenic |
| CTTAAAGCCACTCTGGCAAT+TGG | 0.399226 | 8.3:-275708 | None:intergenic |
| TAGGATCTCCAAACCCTAAA+CGG | 0.401392 | 8.3:-271702 | None:intergenic |
| TCTCTCACTTCAACCTGTCT+TGG | 0.401534 | 8.3:+271768 | MS.gene042056:CDS |
| CCATTGCAGCTAGCAATTGT+AGG | 0.408259 | 8.3:+271988 | MS.gene042056:CDS |
| AGTTTGCTTTCGTCCGCCAC+AGG | 0.410330 | 8.3:-271964 | None:intergenic |
| AATGCTGAAATGAATACTAC+TGG | 0.415349 | 8.3:-275248 | None:intergenic |
| CATCCTCTTGATCAGGAAGT+TGG | 0.417118 | 8.3:+271568 | MS.gene042056:CDS |
| AGCATCCTATGAGCAGATTC+TGG | 0.417507 | 8.3:+274881 | MS.gene042056:CDS |
| CAAGGTTGATTTACCAACAT+TGG | 0.421515 | 8.3:-272016 | None:intergenic |
| TGATCTTAGGCTGTGCTGCC+TGG | 0.423296 | 8.3:-275488 | None:intergenic |
| AGTGCAGATTTGCCGACATT+AGG | 0.428450 | 8.3:-271301 | None:intergenic |
| CCGGGCTCATATAATTGCTT+TGG | 0.431654 | 8.3:+274190 | MS.gene042056:CDS |
| AGTAGTATTCATTTCAGCAT+TGG | 0.432720 | 8.3:+275250 | MS.gene042056:CDS |
| GCCATTCAGGTTGATACTGC+TGG | 0.434612 | 8.3:+274095 | MS.gene042056:intron |
| GTTCTTGTGGGTCCTGAAGC+TGG | 0.440861 | 8.3:+272066 | MS.gene042056:CDS |
| CAAGAAGATCGTGTTCTTGT+GGG | 0.446477 | 8.3:+272054 | MS.gene042056:CDS |
| ATTGCTATATCTGCCGAGAC+TGG | 0.448662 | 8.3:+271724 | MS.gene042056:CDS |
| TGGTCTTCATCCTCTTGATC+AGG | 0.449625 | 8.3:+271561 | MS.gene042056:CDS |
| TTGGTTGCAGAGGACAAAAC+TGG | 0.450758 | 8.3:+274118 | MS.gene042056:CDS |
| CCGTACAACCGTCTTGCATC+AGG | 0.450788 | 8.3:+275283 | MS.gene042056:CDS |
| TCTTAACCGTTGGTTGCAAA+AGG | 0.460544 | 8.3:+275352 | MS.gene042056:CDS |
| ACATTTGTTGCGTTTGTGCA+CGG | 0.466428 | 8.3:+275543 | MS.gene042056:CDS |
| AGGATCTCCAAACCCTAAAC+GGG | 0.466503 | 8.3:-271701 | None:intergenic |
| CCACCAGAAAAGGAATAGAT+TGG | 0.471568 | 8.3:-271173 | None:intergenic |
| AATCCAGACAATTATACCTC+AGG | 0.474181 | 8.3:+274920 | MS.gene042056:CDS |
| CCTTGAGCATTATGCAATCA+AGG | 0.475161 | 8.3:+274156 | MS.gene042056:CDS |
| GTCTCGGCAGATATAGCAAT+AGG | 0.477482 | 8.3:-271721 | None:intergenic |
| ATATCTGCCGAGACTGGACT+TGG | 0.479331 | 8.3:+271730 | MS.gene042056:CDS |
| CATTTCAGCATTGGAGGGAA+GGG | 0.480874 | 8.3:+275259 | MS.gene042056:CDS |
| ACCTCTACTGAAGGTGCGGC+GGG | 0.489201 | 8.3:-271197 | None:intergenic |
| AAACCTGAGGTATAATTGTC+TGG | 0.489998 | 8.3:-274923 | None:intergenic |
| AGCCTCCAGAATCTGCTCAT+AGG | 0.491278 | 8.3:-274886 | None:intergenic |
| AGAAGCAGTTCTATGGAGAA+TGG | 0.491490 | 8.3:-271479 | None:intergenic |
| AGTATTCATTTCAGCATTGG+AGG | 0.499259 | 8.3:+275253 | MS.gene042056:CDS |
| AGCATATAGTTCTCCAAGAC+AGG | 0.503239 | 8.3:-271781 | None:intergenic |
| GTTTGCTTTCGTCCGCCACA+GGG | 0.506103 | 8.3:-271963 | None:intergenic |
| CCTACAATTGCTAGCTGCAA+TGG | 0.508566 | 8.3:-271988 | None:intergenic |
| TATATGCTCAGTGTCTTGAA+TGG | 0.509975 | 8.3:+271796 | MS.gene042056:CDS |
| ATCAAGGAAGAGTCTACTCC+GGG | 0.510619 | 8.3:+274172 | MS.gene042056:CDS |
| AGGCGACTTGGTTGAATCAA+AGG | 0.512056 | 8.3:+275755 | MS.gene042056:CDS |
| TTTCCAACTTCCTGATCAAG+AGG | 0.514682 | 8.3:-271571 | None:intergenic |
| TGCGGCGGGTCCACCAGAAA+AGG | 0.516259 | 8.3:-271183 | None:intergenic |
| CTACAGCTCGTCTTAACCGT+TGG | 0.516393 | 8.3:+275342 | MS.gene042056:CDS |
| AGCCAGACGAGCCGTGGAAG+AGG | 0.523102 | 8.3:+274800 | MS.gene042056:CDS |
| CATTTGTTGCGTTTGTGCAC+GGG | 0.523246 | 8.3:+275544 | MS.gene042056:CDS |
| TCATTTCAGCATTGGAGGGA+AGG | 0.523663 | 8.3:+275258 | MS.gene042056:CDS |
| AAAGATGACTTTGATTTGGG+TGG | 0.523787 | 8.3:+275615 | MS.gene042056:CDS |
| GTCGCGGGTGACATGATCGT+CGG | 0.527824 | 8.3:-271371 | None:intergenic |
| AGTTATAGCCAGACGAGCCG+TGG | 0.527937 | 8.3:+274794 | MS.gene042056:CDS |
| AGCATCAGTGAGGAAGAGTA+AGG | 0.529884 | 8.3:-271533 | None:intergenic |
| CTTAATCCTTAAAGCCACTC+TGG | 0.530160 | 8.3:-275715 | None:intergenic |
| TCGCGGGTGACATGATCGTC+GGG | 0.530196 | 8.3:-271370 | None:intergenic |
| TTCCTCACTGATGCTAGAGC+TGG | 0.533462 | 8.3:+271541 | MS.gene042056:CDS |
| CAAGAGAGATAAAGGCGACT+TGG | 0.533482 | 8.3:+275743 | MS.gene042056:CDS |
| ATTTCAGCATTGGAGGGAAG+GGG | 0.533760 | 8.3:+275260 | MS.gene042056:CDS |
| CCTTGATTGCATAATGCTCA+AGG | 0.534896 | 8.3:-274156 | None:intergenic |
| GCAAGAAGATCGTGTTCTTG+TGG | 0.536796 | 8.3:+272053 | MS.gene042056:CDS |
| ATTGTAGGACGCCCCAATGT+TGG | 0.540370 | 8.3:+272003 | MS.gene042056:CDS |
| GCCAGACGAGCCGTGGAAGA+GGG | 0.542466 | 8.3:+274801 | MS.gene042056:CDS |
| GACTCCTTCACGAATGTCGC+GGG | 0.544485 | 8.3:-271386 | None:intergenic |
| TACTAAGAAGAACAACAAGT+TGG | 0.545516 | 8.3:+271225 | MS.gene042056:CDS |
| CGGCCGAGAATGATGACGGT+GGG | 0.550366 | 8.3:-271277 | None:intergenic |
| CCAAAGCAATTATATGAGCC+CGG | 0.555243 | 8.3:-274190 | None:intergenic |
| ATTGCTTTGGTACTAGATGC+CGG | 0.556355 | 8.3:+274203 | MS.gene042056:CDS |
| GAACAAGATGGATCTTCTAA+GGG | 0.556692 | 8.3:+274845 | MS.gene042056:CDS |
| ACCCGCCGCACCTTCAGTAG+AGG | 0.557052 | 8.3:+271196 | MS.gene042056:CDS |
| TTCAGGTTGATACTGCTGGT+TGG | 0.557730 | 8.3:+274099 | MS.gene042056:intron |
| GGAACTAGTCTCATCATCGC+AGG | 0.566444 | 8.3:-271941 | None:intergenic |
| ATGGAGAATGGAACCAGAAG+TGG | 0.568402 | 8.3:-271467 | None:intergenic |
| TGTTGTGATTGTGAACAAGA+TGG | 0.568875 | 8.3:+274833 | MS.gene042056:CDS |
| CGAGCCGTGGAAGAGGGACG+TGG | 0.569833 | 8.3:+274807 | MS.gene042056:CDS |
| ATGCATACCAAGTCCAGTCT+CGG | 0.571837 | 8.3:-271737 | None:intergenic |
| CCTGATGCAAGACGGTTGTA+CGG | 0.574718 | 8.3:-275283 | None:intergenic |
| AAGCCACTCTGGCAATTGGA+TGG | 0.576147 | 8.3:-275704 | None:intergenic |
| ATACTGCTGGTTGGTTGCAG+AGG | 0.577960 | 8.3:+274108 | MS.gene042056:CDS |
| AACCTCTACTGAAGGTGCGG+CGG | 0.578312 | 8.3:-271198 | None:intergenic |
| TCTATTGCTAAGAAAGATGC+TGG | 0.579545 | 8.3:+275663 | MS.gene042056:CDS |
| CAGAGGACAAAACTGGAGAA+AGG | 0.588172 | 8.3:+274125 | MS.gene042056:CDS |
| TGCACAAACGCAACAAATGT+AGG | 0.589076 | 8.3:-275540 | None:intergenic |
| TTGCAACAATGTATTCAGCA+AGG | 0.591457 | 8.3:-272034 | None:intergenic |
| TTGCTAAGAAAGATGCTGGT+GGG | 0.592670 | 8.3:+275667 | MS.gene042056:CDS |
| CGACTCCTTCACGAATGTCG+CGG | 0.594219 | 8.3:-271387 | None:intergenic |
| CAGACATTCTTGGAAAGACC+AGG | 0.594703 | 8.3:+275470 | MS.gene042056:CDS |
| GGCCGAGAATGATGACGGTG+GGG | 0.596616 | 8.3:-271276 | None:intergenic |
| CATTATAGATGAAAGTGCTA+AGG | 0.602590 | 8.3:+271912 | MS.gene042056:intron |
| AATCAAGGAAGAGTCTACTC+CGG | 0.602668 | 8.3:+274171 | MS.gene042056:CDS |
| TTTGCTTTCGTCCGCCACAG+GGG | 0.606344 | 8.3:-271962 | None:intergenic |
| GTATTCATTTCAGCATTGGA+GGG | 0.607640 | 8.3:+275254 | MS.gene042056:CDS |
| ATTCTCGGCCGACCTAATGT+CGG | 0.613530 | 8.3:+271289 | MS.gene042056:CDS |
| AGTACAGAAACCTCTACTGA+AGG | 0.618332 | 8.3:-271206 | None:intergenic |
| ATGCTGAAATGAATACTACT+GGG | 0.619348 | 8.3:-275247 | None:intergenic |
| TAGCCATCCAATTGCCAGAG+TGG | 0.626194 | 8.3:+275701 | MS.gene042056:CDS |
| AAGACCACGTCCCTCTTCCA+CGG | 0.628476 | 8.3:-274811 | None:intergenic |
| CAGATTTGCCGACATTAGGT+CGG | 0.632489 | 8.3:-271297 | None:intergenic |
| ACAAGAATAGGTTTAAGTAG+AGG | 0.634465 | 8.3:-271613 | None:intergenic |
| ATTGCTAAGAAAGATGCTGG+TGG | 0.635595 | 8.3:+275666 | MS.gene042056:CDS |
| TGAGACTAGTTCCCCTGTGG+CGG | 0.638071 | 8.3:+271951 | MS.gene042056:CDS |
| GTCACCCGCGACATTCGTGA+AGG | 0.642685 | 8.3:+271382 | MS.gene042056:CDS |
| ATATAAGCAGCATACCTCGC+CGG | 0.643834 | 8.3:-274222 | None:intergenic |
| AGGTCGGCCGAGAATGATGA+CGG | 0.647993 | 8.3:-271281 | None:intergenic |
| AGAAACCTCTACTGAAGGTG+CGG | 0.650291 | 8.3:-271201 | None:intergenic |
| AGGTTGATTTACCAACATTG+GGG | 0.651188 | 8.3:-272014 | None:intergenic |
| AGCTTTCTGATACAGACACC+AGG | 0.651325 | 8.3:+275574 | MS.gene042056:CDS |
| AACAAGATGGATCTTCTAAG+GGG | 0.653213 | 8.3:+274846 | MS.gene042056:CDS |
| ATCCTATGAGCAGATTCTGG+AGG | 0.674083 | 8.3:+274884 | MS.gene042056:CDS |
| TTTGGTACTAGATGCCGGCG+AGG | 0.691470 | 8.3:+274208 | MS.gene042056:CDS |
| ATCAATGACCTGATGCAAGA+CGG | 0.696129 | 8.3:-275291 | None:intergenic |
| TCGGCCGAGAATGATGACGG+TGG | 0.705355 | 8.3:-271278 | None:intergenic |
| GACCAGCTCTAGCATCAGTG+AGG | 0.711854 | 8.3:-271543 | None:intergenic |
| TGATGAGACTAGTTCCCCTG+TGG | 0.712546 | 8.3:+271948 | MS.gene042056:CDS |
| ACAAACGCAACAAATGTAGG+CGG | 0.770638 | 8.3:-275537 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATAAATAAATAAAA+GGG | - | chr8.3:271828-271847 | None:intergenic | 0.0% |
| !!! | TTTTATAATAAATAAATAAA+AGG | - | chr8.3:271829-271848 | None:intergenic | 0.0% |
| !! | ATAATATCTTGATATTATTA+TGG | + | chr8.3:273070-273089 | MS.gene042056:intron | 10.0% |
| !! | ATTTAATTGTCATATTAAAT+AGG | + | chr8.3:272585-272604 | MS.gene042056:intron | 10.0% |
| !! | TTTAATTGTCATATTAAATA+GGG | + | chr8.3:272586-272605 | MS.gene042056:intron | 10.0% |
| !!! | AAATATTTAATCTTGTTATA+AGG | + | chr8.3:274703-274722 | MS.gene042056:intron | 10.0% |
| !!! | ATAAATTTTAAAAATGTAAC+CGG | - | chr8.3:274064-274083 | None:intergenic | 10.0% |
| !! | AAAATTGAAAACTAATCATA+TGG | - | chr8.3:273112-273131 | None:intergenic | 15.0% |
| !! | AAATTGAAAACTAATCATAT+GGG | - | chr8.3:273111-273130 | None:intergenic | 15.0% |
| !! | CTAAATAAATAAGAAATTTG+AGG | - | chr8.3:273199-273218 | None:intergenic | 15.0% |
| !! | TAAATTACAATACAAACAAT+GGG | - | chr8.3:275189-275208 | None:intergenic | 15.0% |
| !! | TAATGTTTATTGTTCTAATT+TGG | + | chr8.3:274317-274336 | MS.gene042056:intron | 15.0% |
| !! | TTCAAATCAAAATACTAATT+TGG | - | chr8.3:272561-272580 | None:intergenic | 15.0% |
| !!! | ATGTTACCATTTTTTAAAAA+TGG | + | chr8.3:275015-275034 | MS.gene042056:intron | 15.0% |
| !!! | CTCAAATTTCTTATTTATTT+AGG | + | chr8.3:273197-273216 | MS.gene042056:intron | 15.0% |
| !!! | TTGTTATAAGGTTTTTTTAT+TGG | + | chr8.3:274715-274734 | MS.gene042056:intron | 15.0% |
| !! | AAAGTGTAAACCAAAAATTA+TGG | - | chr8.3:274550-274569 | None:intergenic | 20.0% |
| !! | AACATTTAATATTGAAACTC+CGG | + | chr8.3:274042-274061 | MS.gene042056:intron | 20.0% |
| !! | AAGTGTAAACCAAAAATTAT+GGG | - | chr8.3:274549-274568 | None:intergenic | 20.0% |
| !! | ATCATGTTAAAACACAAATT+TGG | - | chr8.3:275045-275064 | None:intergenic | 20.0% |
| !! | ATTATAGGATAGAAATAAAG+AGG | + | chr8.3:273418-273437 | MS.gene042056:intron | 20.0% |
| !! | GATATTATTATGGAATGTAT+TGG | + | chr8.3:273080-273099 | MS.gene042056:intron | 20.0% |
| !! | GGATCAATGTTATTAAATTA+CGG | + | chr8.3:273611-273630 | MS.gene042056:intron | 20.0% |
| !! | GTAAATTACAATACAAACAA+TGG | - | chr8.3:275190-275209 | None:intergenic | 20.0% |
| !! | TGTAATTTACTATTGAGTAT+TGG | + | chr8.3:275200-275219 | MS.gene042056:intron | 20.0% |
| !! | TTATAGGATAGAAATAAAGA+GGG | + | chr8.3:273419-273438 | MS.gene042056:intron | 20.0% |
| !! | TTCTATCCTATAATTTAACT+TGG | - | chr8.3:273412-273431 | None:intergenic | 20.0% |
| !!! | ATTGATCACGTTTTTAATAA+AGG | - | chr8.3:274645-274664 | None:intergenic | 20.0% |
| !!! | TGATATAATTGATAATGACT+TGG | - | chr8.3:273273-273292 | None:intergenic | 20.0% |
| !!! | TTACTAGAACAATTACATTT+TGG | - | chr8.3:274383-274402 | None:intergenic | 20.0% |
| !!! | TTGATCACGTTTTTAATAAA+GGG | - | chr8.3:274644-274663 | None:intergenic | 20.0% |
| !!! | TTTGAATCTACTAAGATTTT+TGG | + | chr8.3:274423-274442 | MS.gene042056:intron | 20.0% |
| ! | AACTACTTCAATTACAACTT+TGG | + | chr8.3:275379-275398 | MS.gene042056:intron | 25.0% |
| ! | ACAACATAACTTCATTTAAG+GGG | - | chr8.3:274574-274593 | None:intergenic | 25.0% |
| ! | ACAGGTATGTAAAATAATCA+TGG | - | chr8.3:273154-273173 | None:intergenic | 25.0% |
| ! | ACTACTTCAATTACAACTTT+GGG | + | chr8.3:275380-275399 | MS.gene042056:intron | 25.0% |
| ! | ACTCTACCAAGTTAAATTAT+AGG | + | chr8.3:273403-273422 | MS.gene042056:intron | 25.0% |
| ! | AGAATTGTAGCAAATTGATT+TGG | - | chr8.3:272453-272472 | None:intergenic | 25.0% |
| ! | ATGTGTACATAAGAATAAAG+TGG | + | chr8.3:272666-272685 | MS.gene042056:intron | 25.0% |
| ! | GACAACATAACTTCATTTAA+GGG | - | chr8.3:274575-274594 | None:intergenic | 25.0% |
| ! | GATTTATTCATGACAAGAAT+AGG | - | chr8.3:271628-271647 | None:intergenic | 25.0% |
| ! | GGCAATAATATCTAATTTGA+AGG | - | chr8.3:272264-272283 | None:intergenic | 25.0% |
| ! | TCATTGATACATACGAAAAA+TGG | + | chr8.3:275306-275325 | MS.gene042056:CDS | 25.0% |
| ! | TGAGTAAAATACTTGATCTT+AGG | - | chr8.3:275504-275523 | None:intergenic | 25.0% |
| ! | TGTGTACATAAGAATAAAGT+GGG | + | chr8.3:272667-272686 | MS.gene042056:intron | 25.0% |
| ! | TTAAAAGAAGAATGTAGAAG+AGG | - | chr8.3:272904-272923 | None:intergenic | 25.0% |
| !! | ACTATTTATCTGGTAAGTTT+TGG | + | chr8.3:272135-272154 | MS.gene042056:intron | 25.0% |
| !! | AGAATAGAGATTTAAAACCA+AGG | - | chr8.3:272482-272501 | None:intergenic | 25.0% |
| !! | AGTTGTGAGATTTTAGATAA+AGG | - | chr8.3:273320-273339 | None:intergenic | 25.0% |
| !! | TAAGATCAAGTATTTTACTC+AGG | + | chr8.3:275503-275522 | MS.gene042056:CDS | 25.0% |
| !! | TGGTTGATTATATCACATTT+TGG | - | chr8.3:274269-274288 | None:intergenic | 25.0% |
| !! | TTGAAAGATGACTTTGATTT+GGG | + | chr8.3:275612-275631 | MS.gene042056:CDS | 25.0% |
| !!! | AATTTAACTTGGTAGAGTAA+TGG | - | chr8.3:273401-273420 | None:intergenic | 25.0% |
| !!! | ATGTACACATTAGCTATTTT+AGG | - | chr8.3:272656-272675 | None:intergenic | 25.0% |
| !!! | ATTTAACTTGGTAGAGTAAT+GGG | - | chr8.3:273400-273419 | None:intergenic | 25.0% |
| !!! | CCTTCAATGAAAAAGTATTT+GGG | - | chr8.3:274466-274485 | None:intergenic | 25.0% |
| !!! | GAGAGTTGATAGAAAAAAAT+CGG | + | chr8.3:273047-273066 | MS.gene042056:intron | 25.0% |
| !!! | GGATGTCCATTTTTAAAAAA+TGG | - | chr8.3:275024-275043 | None:intergenic | 25.0% |
| !!! | TAGAACAATTACATTTTGGT+TGG | - | chr8.3:274379-274398 | None:intergenic | 25.0% |
| !!! | TCTCGTTTCAGTTATTTTTT+TGG | + | chr8.3:272997-273016 | MS.gene042056:intron | 25.0% |
| !!! | TGTACACATTAGCTATTTTA+GGG | - | chr8.3:272655-272674 | None:intergenic | 25.0% |
| AAAAACGTGATCAATCAGAA+AGG | + | chr8.3:274650-274669 | MS.gene042056:intron | 30.0% | |
| AAAAGATTCCCAACTATTTC+CGG | - | chr8.3:272836-272855 | None:intergenic | 30.0% | |
| AAAATCTCACAACTTCAACA+TGG | + | chr8.3:273326-273345 | MS.gene042056:intron | 30.0% | |
| AACTTCGCATGTTAAAACAT+TGG | - | chr8.3:274289-274308 | None:intergenic | 30.0% | |
| AAGAACAAACAAAATCTGTG+AGG | + | chr8.3:275094-275113 | MS.gene042056:intron | 30.0% | |
| AATGCTGAAATGAATACTAC+TGG | - | chr8.3:275251-275270 | None:intergenic | 30.0% | |
| ACAAGAATAGGTTTAAGTAG+AGG | - | chr8.3:271616-271635 | None:intergenic | 30.0% | |
| AGAACTCAGTTTGAATTTCA+AGG | + | chr8.3:272108-272127 | MS.gene042056:CDS | 30.0% | |
| AGGATTAAACAAAATAGCCA+AGG | - | chr8.3:272884-272903 | None:intergenic | 30.0% | |
| AGTAGTATTCATTTCAGCAT+TGG | + | chr8.3:275250-275269 | MS.gene042056:CDS | 30.0% | |
| ATAACCTGATCAAAAACAAC+CGG | - | chr8.3:275447-275466 | None:intergenic | 30.0% | |
| ATGCTGAAATGAATACTACT+GGG | - | chr8.3:275250-275269 | None:intergenic | 30.0% | |
| ATGTTATTAAATTACGGCCA+TGG | + | chr8.3:273617-273636 | MS.gene042056:intron | 30.0% | |
| CAAATCAAAGTCATCTTTCA+AGG | - | chr8.3:275613-275632 | None:intergenic | 30.0% | |
| CAGTAATAATACTAAGCAAC+AGG | - | chr8.3:273172-273191 | None:intergenic | 30.0% | |
| CTAGTAACTCATTTATCTTG+TGG | + | chr8.3:274396-274415 | MS.gene042056:intron | 30.0% | |
| CTGTGTTGTAAAAGATTGAT+TGG | - | chr8.3:273791-273810 | None:intergenic | 30.0% | |
| CTTGAAAGATGACTTTGATT+TGG | + | chr8.3:275611-275630 | MS.gene042056:CDS | 30.0% | |
| GGACAACATAACTTCATTTA+AGG | - | chr8.3:274576-274595 | None:intergenic | 30.0% | |
| GTAGTAAATATTCTTTCTCC+CGG | + | chr8.3:275425-275444 | MS.gene042056:intron | 30.0% | |
| GTGTACATAAGAATAAAGTG+GGG | + | chr8.3:272668-272687 | MS.gene042056:intron | 30.0% | |
| TAAGAAATAACAGCAGGATT+TGG | + | chr8.3:273547-273566 | MS.gene042056:intron | 30.0% | |
| TACTAAGAAGAACAACAAGT+TGG | + | chr8.3:271225-271244 | MS.gene042056:CDS | 30.0% | |
| TCAAGGAAGAACTATTTATC+TGG | + | chr8.3:272125-272144 | MS.gene042056:CDS | 30.0% | |
| TCTAAAGGAATGTATCTTGT+TGG | + | chr8.3:272202-272221 | MS.gene042056:intron | 30.0% | |
| TGAAGAGTAAAATGTGCAAT+TGG | + | chr8.3:275403-275422 | MS.gene042056:intron | 30.0% | |
| TTAACACCTAGAAATTAGAG+AGG | - | chr8.3:274681-274700 | None:intergenic | 30.0% | |
| ! | AAGGTTGATTTACCAACATT+GGG | - | chr8.3:272018-272037 | None:intergenic | 30.0% |
| ! | ATTCCAATCTATTCCTTTTC+TGG | + | chr8.3:271170-271189 | MS.gene042056:CDS | 30.0% |
| ! | CAAGTATTTTACTCAGGTTA+AGG | + | chr8.3:275509-275528 | MS.gene042056:CDS | 30.0% |
| ! | CATCTTTCAAGGATTTTGTT+AGG | - | chr8.3:275602-275621 | None:intergenic | 30.0% |
| ! | GTCTTTTTAACATCTATCAC+TGG | - | chr8.3:272716-272735 | None:intergenic | 30.0% |
| ! | TGTGAGATTTTAGATAAAGG+AGG | - | chr8.3:273317-273336 | None:intergenic | 30.0% |
| ! | TTAATACCTTTTGCAACCAA+CGG | - | chr8.3:275361-275380 | None:intergenic | 30.0% |
| ! | TTTAGTAGTGTTGTTAGAGT+TGG | + | chr8.3:272167-272186 | MS.gene042056:intron | 30.0% |
| !! | CATTATAGATGAAAGTGCTA+AGG | + | chr8.3:271912-271931 | MS.gene042056:intron | 30.0% |
| !! | CTGTATTGATAATGAACTTC+AGG | - | chr8.3:273965-273984 | None:intergenic | 30.0% |
| !! | GCCTTCAATGAAAAAGTATT+TGG | - | chr8.3:274467-274486 | None:intergenic | 30.0% |
| !! | GTACACATTAGCTATTTTAG+GGG | - | chr8.3:272654-272673 | None:intergenic | 30.0% |
| !!! | CCCAAATACTTTTTCATTGA+AGG | + | chr8.3:274463-274482 | MS.gene042056:intron | 30.0% |
| !!! | GAGTATTGGCAATTTTCAAT+AGG | + | chr8.3:275214-275233 | MS.gene042056:intron | 30.0% |
| !!! | TATCTGGTAAGTTTTGGTTT+TGG | + | chr8.3:272141-272160 | MS.gene042056:intron | 30.0% |
| AAAAATTATGGGACTGAAGC+AGG | - | chr8.3:274538-274557 | None:intergenic | 35.0% | |
| AAACCTGAGGTATAATTGTC+TGG | - | chr8.3:274926-274945 | None:intergenic | 35.0% | |
| AAAGGAATGTATCTTGTTGG+AGG | + | chr8.3:272205-272224 | MS.gene042056:intron | 35.0% | |
| AACAAGATGGATCTTCTAAG+GGG | + | chr8.3:274846-274865 | MS.gene042056:CDS | 35.0% | |
| AAGTCTGACAAGAGAGATAA+AGG | + | chr8.3:275735-275754 | MS.gene042056:CDS | 35.0% | |
| AATCCAGACAATTATACCTC+AGG | + | chr8.3:274920-274939 | MS.gene042056:CDS | 35.0% | |
| AATGAATACTACTGGGATTC+CGG | - | chr8.3:275243-275262 | None:intergenic | 35.0% | |
| ATAAAGAGGGACATGTTTGA+AGG | + | chr8.3:273432-273451 | MS.gene042056:intron | 35.0% | |
| ATAACTACATAGCAAACCTG+AGG | - | chr8.3:274939-274958 | None:intergenic | 35.0% | |
| ATACTTGATGTCACCTACAT+AGG | + | chr8.3:272938-272957 | MS.gene042056:intron | 35.0% | |
| ATGTAGGTGACATCAAGTAT+TGG | - | chr8.3:272938-272957 | None:intergenic | 35.0% | |
| ATTTGGGTGGAATTCCTATA+AGG | + | chr8.3:275628-275647 | MS.gene042056:CDS | 35.0% | |
| CAAATCGGAAAAGAAATGTG+TGG | - | chr8.3:272285-272304 | None:intergenic | 35.0% | |
| CACATACCAATGCATCATAA+TGG | - | chr8.3:274597-274616 | None:intergenic | 35.0% | |
| CATAAGAATAAAGTGGGGAT+AGG | + | chr8.3:272673-272692 | MS.gene042056:intron | 35.0% | |
| CATTTCCTGAAAATTACTCG+AGG | + | chr8.3:273868-273887 | MS.gene042056:intron | 35.0% | |
| CGTCTAGATGTTCAATGTAT+TGG | + | chr8.3:274970-274989 | MS.gene042056:intron | 35.0% | |
| CTAATGAAATGTCCCGTTTA+GGG | + | chr8.3:271689-271708 | MS.gene042056:CDS | 35.0% | |
| GAACAAGATGGATCTTCTAA+GGG | + | chr8.3:274845-274864 | MS.gene042056:CDS | 35.0% | |
| GAATCACTCTTTGATGTTGA+TGG | + | chr8.3:271649-271668 | MS.gene042056:CDS | 35.0% | |
| GTTATTTGGTTGCAAAGGAA+CGG | + | chr8.3:272788-272807 | MS.gene042056:intron | 35.0% | |
| GTTTACTCTGCGTTTATGAT+AGG | - | chr8.3:274025-274044 | None:intergenic | 35.0% | |
| TAAAGAGGGACATGTTTGAA+GGG | + | chr8.3:273433-273452 | MS.gene042056:intron | 35.0% | |
| TAACCTGATCAAAAACAACC+GGG | - | chr8.3:275446-275465 | None:intergenic | 35.0% | |
| TATATGCTCAGTGTCTTGAA+TGG | + | chr8.3:271796-271815 | MS.gene042056:CDS | 35.0% | |
| TCTATTGCTAAGAAAGATGC+TGG | + | chr8.3:275663-275682 | MS.gene042056:CDS | 35.0% | |
| TCTGGGTTCTTGAAAACTAA+GGG | - | chr8.3:273919-273938 | None:intergenic | 35.0% | |
| TGAACAAGATGGATCTTCTA+AGG | + | chr8.3:274844-274863 | MS.gene042056:CDS | 35.0% | |
| TGCCCTGTTATATACATCAT+CGG | + | chr8.3:272391-272410 | MS.gene042056:intron | 35.0% | |
| TGGAAACTGACAGAATCTAA+AGG | + | chr8.3:272187-272206 | MS.gene042056:intron | 35.0% | |
| TGTAGGTGACATCAAGTATT+GGG | - | chr8.3:272937-272956 | None:intergenic | 35.0% | |
| TGTTGGAGGAAAACATAGTA+TGG | + | chr8.3:272219-272238 | MS.gene042056:intron | 35.0% | |
| TGTTGTCCATTATGATGCAT+TGG | + | chr8.3:274588-274607 | MS.gene042056:intron | 35.0% | |
| TGTTGTGATTGTGAACAAGA+TGG | + | chr8.3:274833-274852 | MS.gene042056:CDS | 35.0% | |
| TTATTTGGTTGCAAAGGAAC+GGG | + | chr8.3:272789-272808 | MS.gene042056:intron | 35.0% | |
| TTCAATTTGCACAAATCCTG+AGG | - | chr8.3:273474-273493 | None:intergenic | 35.0% | |
| TTCGTTTAGCACTTACTATC+TGG | - | chr8.3:274755-274774 | None:intergenic | 35.0% | |
| TTCTGGGTTCTTGAAAACTA+AGG | - | chr8.3:273920-273939 | None:intergenic | 35.0% | |
| TTGATCAGGAAGTTGGAAAA+TGG | + | chr8.3:271575-271594 | MS.gene042056:CDS | 35.0% | |
| TTGCAACAATGTATTCAGCA+AGG | - | chr8.3:272037-272056 | None:intergenic | 35.0% | |
| TTTGATGGAGGAAGAAGATA+GGG | + | chr8.3:273514-273533 | MS.gene042056:intron | 35.0% | |
| ! | AGGTTGATTTACCAACATTG+GGG | - | chr8.3:272017-272036 | None:intergenic | 35.0% |
| ! | AGTATTCATTTCAGCATTGG+AGG | + | chr8.3:275253-275272 | MS.gene042056:CDS | 35.0% |
| ! | ATTATGTTTTGCTGCCATTC+AGG | + | chr8.3:274082-274101 | MS.gene042056:intron | 35.0% |
| ! | CAAGGTTGATTTACCAACAT+TGG | - | chr8.3:272019-272038 | None:intergenic | 35.0% |
| ! | GCTACAATTCTGATTTTCCT+TGG | + | chr8.3:272462-272481 | MS.gene042056:intron | 35.0% |
| ! | GGAAATAGTTGGGAATCTTT+TGG | + | chr8.3:272835-272854 | MS.gene042056:intron | 35.0% |
| ! | GGCAATTTTCAATAGGTTAC+CGG | + | chr8.3:275221-275240 | MS.gene042056:intron | 35.0% |
| ! | GTATTCATTTCAGCATTGGA+GGG | + | chr8.3:275254-275273 | MS.gene042056:CDS | 35.0% |
| ! | TGCTTCAGTCCCATAATTTT+TGG | + | chr8.3:274537-274556 | MS.gene042056:intron | 35.0% |
| !! | AAAGATGACTTTGATTTGGG+TGG | + | chr8.3:275615-275634 | MS.gene042056:CDS | 35.0% |
| !! | GTGTTTTATGGTGGAAATAG+CGG | + | chr8.3:273704-273723 | MS.gene042056:intron | 35.0% |
| !! | TAGCTATTTTAGGGGTTTTC+CGG | - | chr8.3:272646-272665 | None:intergenic | 35.0% |
| !! | TAGGGTCTGCTTTAAGATAT+AGG | + | chr8.3:272604-272623 | MS.gene042056:intron | 35.0% |
| AATCAAGGAAGAGTCTACTC+CGG | + | chr8.3:274171-274190 | MS.gene042056:CDS | 40.0% | |
| ACAAACGCAACAAATGTAGG+CGG | - | chr8.3:275540-275559 | None:intergenic | 40.0% | |
| ACAAAGAAAGAGGGATGTTG+AGG | - | chr8.3:275140-275159 | None:intergenic | 40.0% | |
| ACCTGATATCACCTTGATAC+AGG | + | chr8.3:273939-273958 | MS.gene042056:intron | 40.0% | |
| ACTTGAATGCGCACACAAAT+CGG | - | chr8.3:272300-272319 | None:intergenic | 40.0% | |
| AGAAGCAGTTCTATGGAGAA+TGG | - | chr8.3:271482-271501 | None:intergenic | 40.0% | |
| AGCATATAGTTCTCCAAGAC+AGG | - | chr8.3:271784-271803 | None:intergenic | 40.0% | |
| AGCCAATTTGTGAAGGATAG+TGG | + | chr8.3:273674-273693 | MS.gene042056:intron | 40.0% | |
| AGGAAGAAGATAGGGAAGTA+GGG | + | chr8.3:273522-273541 | MS.gene042056:intron | 40.0% | |
| AGGCAATAAACCAACAAGAC+CGG | + | chr8.3:272624-272643 | MS.gene042056:intron | 40.0% | |
| AGGGCTTAAGAAATAACAGC+AGG | + | chr8.3:273541-273560 | MS.gene042056:intron | 40.0% | |
| AGGTTATGAGCAGACATTCT+TGG | + | chr8.3:275460-275479 | MS.gene042056:intron | 40.0% | |
| AGTACAGAAACCTCTACTGA+AGG | - | chr8.3:271209-271228 | None:intergenic | 40.0% | |
| ATCAAGGTGATATCAGGTTC+TGG | - | chr8.3:273937-273956 | None:intergenic | 40.0% | |
| ATCAATGACCTGATGCAAGA+CGG | - | chr8.3:275294-275313 | None:intergenic | 40.0% | |
| ATTGAAGGCTCGATAGTTCT+AGG | + | chr8.3:274478-274497 | MS.gene042056:intron | 40.0% | |
| ATTGCTAAGAAAGATGCTGG+TGG | + | chr8.3:275666-275685 | MS.gene042056:CDS | 40.0% | |
| ATTGCTTTGGTACTAGATGC+CGG | + | chr8.3:274203-274222 | MS.gene042056:CDS | 40.0% | |
| CAAGAAGATCGTGTTCTTGT+GGG | + | chr8.3:272054-272073 | MS.gene042056:CDS | 40.0% | |
| CAATTGTCCTTGGAGAGTAA+AGG | + | chr8.3:273590-273609 | MS.gene042056:intron | 40.0% | |
| CAGTGAAAGAAGCAGTTCTA+TGG | - | chr8.3:271489-271508 | None:intergenic | 40.0% | |
| CATTGATCCTTTACTCTCCA+AGG | - | chr8.3:273600-273619 | None:intergenic | 40.0% | |
| CCAAAGCAATTATATGAGCC+CGG | - | chr8.3:274193-274212 | None:intergenic | 40.0% | |
| CCACCAGAAAAGGAATAGAT+TGG | - | chr8.3:271176-271195 | None:intergenic | 40.0% | |
| CCCCGATGATGTATATAACA+GGG | - | chr8.3:272396-272415 | None:intergenic | 40.0% | |
| CCCTGTTATATACATCATCG+GGG | + | chr8.3:272393-272412 | MS.gene042056:intron | 40.0% | |
| CCTGTTATATACATCATCGG+GGG | + | chr8.3:272394-272413 | MS.gene042056:intron | 40.0% | |
| CCTTCACAAATTGGCTATAG+CGG | - | chr8.3:273670-273689 | None:intergenic | 40.0% | |
| CCTTGAGCATTATGCAATCA+AGG | + | chr8.3:274156-274175 | MS.gene042056:CDS | 40.0% | |
| CCTTGATTGCATAATGCTCA+AGG | - | chr8.3:274159-274178 | None:intergenic | 40.0% | |
| CTATCTTCTTCCTCCATCAA+AGG | - | chr8.3:273515-273534 | None:intergenic | 40.0% | |
| CTGGGTTCTTGAAAACTAAG+GGG | - | chr8.3:273918-273937 | None:intergenic | 40.0% | |
| CTTAATCCTTAAAGCCACTC+TGG | - | chr8.3:275718-275737 | None:intergenic | 40.0% | |
| CTTTACTCTCCAAGGACAAT+TGG | - | chr8.3:273592-273611 | None:intergenic | 40.0% | |
| CTTTGATGGAGGAAGAAGAT+AGG | + | chr8.3:273513-273532 | MS.gene042056:intron | 40.0% | |
| GCCCTGTTATATACATCATC+GGG | + | chr8.3:272392-272411 | MS.gene042056:intron | 40.0% | |
| GCTAATGAAATGTCCCGTTT+AGG | + | chr8.3:271688-271707 | MS.gene042056:CDS | 40.0% | |
| GCTGTTCTTGGTAGATTGTT+GGG | + | chr8.3:273832-273851 | MS.gene042056:intron | 40.0% | |
| GTCTCTCCTCTCTAATTTCT+AGG | + | chr8.3:274672-274691 | MS.gene042056:intron | 40.0% | |
| TAGGATCTCCAAACCCTAAA+CGG | - | chr8.3:271705-271724 | None:intergenic | 40.0% | |
| TCAACAGTTCGTTACAGAGT+GGG | - | chr8.3:272741-272760 | None:intergenic | 40.0% | |
| TCAAGGTGATATCAGGTTCT+GGG | - | chr8.3:273936-273955 | None:intergenic | 40.0% | |
| TCTGTAACGAACTGTTGAGT+TGG | + | chr8.3:272743-272762 | MS.gene042056:intron | 40.0% | |
| TGCACAAACGCAACAAATGT+AGG | - | chr8.3:275543-275562 | None:intergenic | 40.0% | |
| TGCTGTTCTTGGTAGATTGT+TGG | + | chr8.3:273831-273850 | MS.gene042056:intron | 40.0% | |
| TGTTTGAAGGGAGGATAGAA+TGG | + | chr8.3:273445-273464 | MS.gene042056:intron | 40.0% | |
| TTCTTTGCTGCATATAGCCT+TGG | + | chr8.3:272329-272348 | MS.gene042056:intron | 40.0% | |
| TTGCTAAGAAAGATGCTGGT+GGG | + | chr8.3:275667-275686 | MS.gene042056:CDS | 40.0% | |
| TTTCCAACTTCCTGATCAAG+AGG | - | chr8.3:271574-271593 | None:intergenic | 40.0% | |
| ! | ACATTTGTTGCGTTTGTGCA+CGG | + | chr8.3:275543-275562 | MS.gene042056:CDS | 40.0% |
| ! | AGTGGCGATATGGTGTTTTA+TGG | + | chr8.3:273692-273711 | MS.gene042056:intron | 40.0% |
| ! | CAACACCTCGAGTAATTTTC+AGG | - | chr8.3:273876-273895 | None:intergenic | 40.0% |
| ! | CAAGGATTTTGTTAGGAACC+TGG | - | chr8.3:275595-275614 | None:intergenic | 40.0% |
| ! | CCAATCTATTCCTTTTCTGG+TGG | + | chr8.3:271173-271192 | MS.gene042056:CDS | 40.0% |
| ! | TAGAGTAATGGGACACATCA+TGG | - | chr8.3:273389-273408 | None:intergenic | 40.0% |
| ! | TCACTTGCGTTTCAGAGTTT+TGG | + | chr8.3:271420-271439 | MS.gene042056:CDS | 40.0% |
| ! | TCTTAACCGTTGGTTGCAAA+AGG | + | chr8.3:275352-275371 | MS.gene042056:CDS | 40.0% |
| ! | TTGAAGGCTCGATAGTTCTA+GGG | + | chr8.3:274479-274498 | MS.gene042056:intron | 40.0% |
| !! | GGTGTGTTATTTGGTTGCAA+AGG | + | chr8.3:272783-272802 | MS.gene042056:intron | 40.0% |
| AAATTACGGCCATGGCAGAT+TGG | + | chr8.3:273625-273644 | MS.gene042056:intron | 45.0% | |
| AATTACGGCCATGGCAGATT+GGG | + | chr8.3:273626-273645 | MS.gene042056:intron | 45.0% | |
| ACCAGCAGTATCAACCTGAA+TGG | - | chr8.3:274099-274118 | None:intergenic | 45.0% | |
| ACCATACTAACCGCCTTTGA+TGG | + | chr8.3:273499-273518 | MS.gene042056:intron | 45.0% | |
| AGAAACCTCTACTGAAGGTG+CGG | - | chr8.3:271204-271223 | None:intergenic | 45.0% | |
| AGATACGGCCGGAAATAGTT+GGG | + | chr8.3:272825-272844 | MS.gene042056:intron | 45.0% | |
| AGCATCAGTGAGGAAGAGTA+AGG | - | chr8.3:271536-271555 | None:intergenic | 45.0% | |
| AGCATCCTATGAGCAGATTC+TGG | + | chr8.3:274881-274900 | MS.gene042056:CDS | 45.0% | |
| AGCTTTCTGATACAGACACC+AGG | + | chr8.3:275574-275593 | MS.gene042056:CDS | 45.0% | |
| AGGATCTCCAAACCCTAAAC+GGG | - | chr8.3:271704-271723 | None:intergenic | 45.0% | |
| AGTGCAGATTTGCCGACATT+AGG | - | chr8.3:271304-271323 | None:intergenic | 45.0% | |
| ATAAAGTGGGGATAGGATGC+AGG | + | chr8.3:272680-272699 | MS.gene042056:intron | 45.0% | |
| ATACTAACCGCCTTTGATGG+AGG | + | chr8.3:273502-273521 | MS.gene042056:intron | 45.0% | |
| ATATAAGCAGCATACCTCGC+CGG | - | chr8.3:274225-274244 | None:intergenic | 45.0% | |
| ATATGCAGCAAAGAAGCTCG+CGG | - | chr8.3:272324-272343 | None:intergenic | 45.0% | |
| ATCAAGGAAGAGTCTACTCC+GGG | + | chr8.3:274172-274191 | MS.gene042056:CDS | 45.0% | |
| ATCCTATGAGCAGATTCTGG+AGG | + | chr8.3:274884-274903 | MS.gene042056:CDS | 45.0% | |
| ATGCATACCAAGTCCAGTCT+CGG | - | chr8.3:271740-271759 | None:intergenic | 45.0% | |
| ATGGAGAATGGAACCAGAAG+TGG | - | chr8.3:271470-271489 | None:intergenic | 45.0% | |
| ATTGCTATATCTGCCGAGAC+TGG | + | chr8.3:271724-271743 | MS.gene042056:CDS | 45.0% | |
| CAAAGGAACGGGTGTGAATT+GGG | + | chr8.3:272800-272819 | MS.gene042056:intron | 45.0% | |
| CAACAGTTCGTTACAGAGTG+GGG | - | chr8.3:272740-272759 | None:intergenic | 45.0% | |
| CAAGACACTCCAATTGTCCT+TGG | + | chr8.3:273580-273599 | MS.gene042056:intron | 45.0% | |
| CAAGAGAGATAAAGGCGACT+TGG | + | chr8.3:275743-275762 | MS.gene042056:CDS | 45.0% | |
| CACAAATTGGCTATAGCGGT+TGG | - | chr8.3:273666-273685 | None:intergenic | 45.0% | |
| CAGACATTCTTGGAAAGACC+AGG | + | chr8.3:275470-275489 | MS.gene042056:CDS | 45.0% | |
| CAGAGGACAAAACTGGAGAA+AGG | + | chr8.3:274125-274144 | MS.gene042056:CDS | 45.0% | |
| CAGATTTGCCGACATTAGGT+CGG | - | chr8.3:271300-271319 | None:intergenic | 45.0% | |
| CATCCTCTTGATCAGGAAGT+TGG | + | chr8.3:271568-271587 | MS.gene042056:CDS | 45.0% | |
| CCATTGCAGCTAGCAATTGT+AGG | + | chr8.3:271988-272007 | MS.gene042056:CDS | 45.0% | |
| CCCCCGATGATGTATATAAC+AGG | - | chr8.3:272397-272416 | None:intergenic | 45.0% | |
| CCGCTATAGCCAATTTGTGA+AGG | + | chr8.3:273667-273686 | MS.gene042056:intron | 45.0% | |
| CCGGGCTCATATAATTGCTT+TGG | + | chr8.3:274190-274209 | MS.gene042056:CDS | 45.0% | |
| CCTACAATTGCTAGCTGCAA+TGG | - | chr8.3:271991-272010 | None:intergenic | 45.0% | |
| CGATTGCAGATGGCAGTAAA+TGG | - | chr8.3:273745-273764 | None:intergenic | 45.0% | |
| CGCCACTATCCTTCACAAAT+TGG | - | chr8.3:273679-273698 | None:intergenic | 45.0% | |
| CGTGAAGGAGTCGCTAAATT+AGG | + | chr8.3:271397-271416 | MS.gene042056:CDS | 45.0% | |
| CTCAACAGTTCGTTACAGAG+TGG | - | chr8.3:272742-272761 | None:intergenic | 45.0% | |
| CTTAAAGCCACTCTGGCAAT+TGG | - | chr8.3:275711-275730 | None:intergenic | 45.0% | |
| CTTGCTTCAAGCACCTATGT+AGG | - | chr8.3:272954-272973 | None:intergenic | 45.0% | |
| GAACGCTGCATGATCCTTAT+AGG | - | chr8.3:275645-275664 | None:intergenic | 45.0% | |
| GAGGAAGAAGATAGGGAAGT+AGG | + | chr8.3:273521-273540 | MS.gene042056:intron | 45.0% | |
| GCAAGAAGATCGTGTTCTTG+TGG | + | chr8.3:272053-272072 | MS.gene042056:CDS | 45.0% | |
| GCCTGTATCAAGGTGATATC+AGG | - | chr8.3:273943-273962 | None:intergenic | 45.0% | |
| GGTGTGAATTGGGAGAGATA+CGG | + | chr8.3:272810-272829 | MS.gene042056:intron | 45.0% | |
| GTCTCGGCAGATATAGCAAT+AGG | - | chr8.3:271724-271743 | None:intergenic | 45.0% | |
| TAAAGTGGGGATAGGATGCA+GGG | + | chr8.3:272681-272700 | MS.gene042056:intron | 45.0% | |
| TAGCCAAGGCAATTAGAGAG+CGG | - | chr8.3:272870-272889 | None:intergenic | 45.0% | |
| TCCATCAAAGGCGGTTAGTA+TGG | - | chr8.3:273503-273522 | None:intergenic | 45.0% | |
| TCTCTCACTTCAACCTGTCT+TGG | + | chr8.3:271768-271787 | MS.gene042056:CDS | 45.0% | |
| TCTTCTTCCTCCATCAAAGG+CGG | - | chr8.3:273512-273531 | None:intergenic | 45.0% | |
| TGAACTTCAGGCCTGTATCA+AGG | - | chr8.3:273953-273972 | None:intergenic | 45.0% | |
| TGGTCTTCATCCTCTTGATC+AGG | + | chr8.3:271561-271580 | MS.gene042056:CDS | 45.0% | |
| TTGCAGATGGCAGTAAATGG+CGG | - | chr8.3:273742-273761 | None:intergenic | 45.0% | |
| TTGGTTGCAGAGGACAAAAC+TGG | + | chr8.3:274118-274137 | MS.gene042056:CDS | 45.0% | |
| ! | AGACAGACAAGTGCTGTTCT+TGG | + | chr8.3:273820-273839 | MS.gene042056:intron | 45.0% |
| ! | AGTAATGGGACACATCATGG+AGG | - | chr8.3:273386-273405 | None:intergenic | 45.0% |
| ! | ATTTCAGCATTGGAGGGAAG+GGG | + | chr8.3:275260-275279 | MS.gene042056:CDS | 45.0% |
| ! | CAATTGCCAGAGTGGCTTTA+AGG | + | chr8.3:275709-275728 | MS.gene042056:CDS | 45.0% |
| ! | CATTTCAGCATTGGAGGGAA+GGG | + | chr8.3:275259-275278 | MS.gene042056:CDS | 45.0% |
| ! | CATTTGTTGCGTTTGTGCAC+GGG | + | chr8.3:275544-275563 | MS.gene042056:CDS | 45.0% |
| ! | GAAATGTCCCGTTTAGGGTT+TGG | + | chr8.3:271694-271713 | MS.gene042056:CDS | 45.0% |
| ! | GATTTGGAGCTGATCATGCT+AGG | - | chr8.3:272437-272456 | None:intergenic | 45.0% |
| ! | GGCGATATGGTGTTTTATGG+TGG | + | chr8.3:273695-273714 | MS.gene042056:intron | 45.0% |
| ! | TCAGCGTTATCGATTGCAGA+TGG | - | chr8.3:273755-273774 | None:intergenic | 45.0% |
| ! | TCATTTCAGCATTGGAGGGA+AGG | + | chr8.3:275258-275277 | MS.gene042056:CDS | 45.0% |
| ! | TGTGAAGGATAGTGGCGATA+TGG | + | chr8.3:273682-273701 | MS.gene042056:intron | 45.0% |
| !! | ACTCGAGGTGTTGAATCTGA+TGG | + | chr8.3:273883-273902 | MS.gene042056:intron | 45.0% |
| !! | AGGCGACTTGGTTGAATCAA+AGG | + | chr8.3:275755-275774 | MS.gene042056:CDS | 45.0% |
| !! | TAACGAACTGTTGAGTTGGC+TGG | + | chr8.3:272747-272766 | MS.gene042056:intron | 45.0% |
| !! | TGAAAACTAAGGGGTGTCCT+CGG | - | chr8.3:273909-273928 | None:intergenic | 45.0% |
| !! | TTCAGGTTGATACTGCTGGT+TGG | + | chr8.3:274099-274118 | MS.gene042056:intron | 45.0% |
| !!! | AGTTTTGGACTCTGCTGGTT+TGG | + | chr8.3:271435-271454 | MS.gene042056:CDS | 45.0% |
| !!! | TCTCCCGGTTGTTTTTGATC+AGG | + | chr8.3:275440-275459 | MS.gene042056:intron | 45.0% |
| !!! | TTCAGAGTTTTGGACTCTGC+TGG | + | chr8.3:271430-271449 | MS.gene042056:CDS | 45.0% |
| AAGCCACTCTGGCAATTGGA+TGG | - | chr8.3:275707-275726 | None:intergenic | 50.0% | |
| AGAGGGACATGTTTGAAGGG+AGG | + | chr8.3:273436-273455 | MS.gene042056:intron | 50.0% | |
| AGCCTCCAGAATCTGCTCAT+AGG | - | chr8.3:274889-274908 | None:intergenic | 50.0% | |
| AGCGAGATTGCATATCGCCA+AGG | - | chr8.3:272349-272368 | None:intergenic | 50.0% | |
| ATATCTGCCGAGACTGGACT+TGG | + | chr8.3:271730-271749 | MS.gene042056:CDS | 50.0% | |
| ATTACGGCCATGGCAGATTG+GGG | + | chr8.3:273627-273646 | MS.gene042056:intron | 50.0% | |
| ATTCTCGGCCGACCTAATGT+CGG | + | chr8.3:271289-271308 | MS.gene042056:CDS | 50.0% | |
| ATTGTAGGACGCCCCAATGT+TGG | + | chr8.3:272003-272022 | MS.gene042056:CDS | 50.0% | |
| CCTGATGCAAGACGGTTGTA+CGG | - | chr8.3:275286-275305 | None:intergenic | 50.0% | |
| CTACAGCTCGTCTTAACCGT+TGG | + | chr8.3:275342-275361 | MS.gene042056:CDS | 50.0% | |
| GAGATACGGCCGGAAATAGT+TGG | + | chr8.3:272824-272843 | MS.gene042056:intron | 50.0% | |
| GAGGATAGAATGGAGACCTC+AGG | + | chr8.3:273455-273474 | MS.gene042056:intron | 50.0% | |
| GCAAAGGAACGGGTGTGAAT+TGG | + | chr8.3:272799-272818 | MS.gene042056:intron | 50.0% | |
| GGTTAGTGCATGAGATGCGA+TGG | + | chr8.3:273018-273037 | MS.gene042056:intron | 50.0% | |
| TAGCCATCCAATTGCCAGAG+TGG | + | chr8.3:275701-275720 | MS.gene042056:CDS | 50.0% | |
| TAGTGCATGAGATGCGATGG+TGG | + | chr8.3:273021-273040 | MS.gene042056:intron | 50.0% | |
| TCTCTTGTGAGACCAGCTTC+AGG | - | chr8.3:272081-272100 | None:intergenic | 50.0% | |
| TGAATTGGGAGAGATACGGC+CGG | + | chr8.3:272814-272833 | MS.gene042056:intron | 50.0% | |
| TGACCGCTCTCTAATTGCCT+TGG | + | chr8.3:272864-272883 | MS.gene042056:intron | 50.0% | |
| TTCCTCACTGATGCTAGAGC+TGG | + | chr8.3:271541-271560 | MS.gene042056:CDS | 50.0% | |
| TTGGAAGCTGAAGCCACTTC+TGG | + | chr8.3:271454-271473 | MS.gene042056:CDS | 50.0% | |
| ! | AGATGGCAGTAAATGGCGGA+AGG | - | chr8.3:273738-273757 | None:intergenic | 50.0% |
| ! | ATACTGCTGGTTGGTTGCAG+AGG | + | chr8.3:274108-274127 | MS.gene042056:CDS | 50.0% |
| ! | GGAACTAGTCTCATCATCGC+AGG | - | chr8.3:271944-271963 | None:intergenic | 50.0% |
| ! | GGGCTAGTGGGTGTGTTATT+TGG | + | chr8.3:272774-272793 | MS.gene042056:intron | 50.0% |
| ! | TGATGAGACTAGTTCCCCTG+TGG | + | chr8.3:271948-271967 | MS.gene042056:CDS | 50.0% |
| !! | AACTGTTGAGTTGGCTGGAG+GGG | + | chr8.3:272752-272771 | MS.gene042056:intron | 50.0% |
| !! | AAGGCTCGATAGTTCTAGGG+TGG | + | chr8.3:274482-274501 | MS.gene042056:intron | 50.0% |
| !! | GAACTGTTGAGTTGGCTGGA+GGG | + | chr8.3:272751-272770 | MS.gene042056:intron | 50.0% |
| !! | GCCATTCAGGTTGATACTGC+TGG | + | chr8.3:274095-274114 | MS.gene042056:intron | 50.0% |
| !! | TAGGGGTTTTCCGGTCTTGT+TGG | - | chr8.3:272637-272656 | None:intergenic | 50.0% |
| AAGACCACGTCCCTCTTCCA+CGG | - | chr8.3:274814-274833 | None:intergenic | 55.0% | |
| AGGTCGGCCGAGAATGATGA+CGG | - | chr8.3:271284-271303 | None:intergenic | 55.0% | |
| AGTTATAGCCAGACGAGCCG+TGG | + | chr8.3:274794-274813 | MS.gene042056:CDS | 55.0% | |
| CCGTACAACCGTCTTGCATC+AGG | + | chr8.3:275283-275302 | MS.gene042056:CDS | 55.0% | |
| CGACTCCTTCACGAATGTCG+CGG | - | chr8.3:271390-271409 | None:intergenic | 55.0% | |
| CTCCCCACCGTCATCATTCT+CGG | + | chr8.3:271274-271293 | MS.gene042056:CDS | 55.0% | |
| GACTCCTTCACGAATGTCGC+GGG | - | chr8.3:271389-271408 | None:intergenic | 55.0% | |
| GTTCTTGTGGGTCCTGAAGC+TGG | + | chr8.3:272066-272085 | MS.gene042056:CDS | 55.0% | |
| GTTTGCTTTCGTCCGCCACA+GGG | - | chr8.3:271966-271985 | None:intergenic | 55.0% | |
| TGATCTTAGGCTGTGCTGCC+TGG | - | chr8.3:275491-275510 | None:intergenic | 55.0% | |
| TTTGCTTTCGTCCGCCACAG+GGG | - | chr8.3:271965-271984 | None:intergenic | 55.0% | |
| TTTGGTACTAGATGCCGGCG+AGG | + | chr8.3:274208-274227 | MS.gene042056:CDS | 55.0% | |
| ! | AACCTCTACTGAAGGTGCGG+CGG | - | chr8.3:271201-271220 | None:intergenic | 55.0% |
| ! | AGTTTGCTTTCGTCCGCCAC+AGG | - | chr8.3:271967-271986 | None:intergenic | 55.0% |
| ! | GACCAGCTCTAGCATCAGTG+AGG | - | chr8.3:271546-271565 | None:intergenic | 55.0% |
| ! | GGTGTTGAATCTGATGGCCG+AGG | + | chr8.3:273889-273908 | MS.gene042056:intron | 55.0% |
| ! | TGAGACTAGTTCCCCTGTGG+CGG | + | chr8.3:271951-271970 | MS.gene042056:CDS | 55.0% |
| !! | ACTGTTGAGTTGGCTGGAGG+GGG | + | chr8.3:272753-272772 | MS.gene042056:intron | 55.0% |
| !! | CGAACTGTTGAGTTGGCTGG+AGG | + | chr8.3:272750-272769 | MS.gene042056:intron | 55.0% |
| ACTGCCACCCCAATCTGCCA+TGG | - | chr8.3:273637-273656 | None:intergenic | 60.0% | |
| GTCACCCGCGACATTCGTGA+AGG | + | chr8.3:271382-271401 | MS.gene042056:CDS | 60.0% | |
| GTCGCGGGTGACATGATCGT+CGG | - | chr8.3:271374-271393 | None:intergenic | 60.0% | |
| TCGCGGGTGACATGATCGTC+GGG | - | chr8.3:271373-271392 | None:intergenic | 60.0% | |
| ! | ACCTCTACTGAAGGTGCGGC+GGG | - | chr8.3:271200-271219 | None:intergenic | 60.0% |
| !! | CGGCCGAGAATGATGACGGT+GGG | - | chr8.3:271280-271299 | None:intergenic | 60.0% |
| !! | CTGTTGAGTTGGCTGGAGGG+GGG | + | chr8.3:272754-272773 | MS.gene042056:intron | 60.0% |
| !! | GGCCGAGAATGATGACGGTG+GGG | - | chr8.3:271279-271298 | None:intergenic | 60.0% |
| !! | TCGGCCGAGAATGATGACGG+TGG | - | chr8.3:271281-271300 | None:intergenic | 60.0% |
| ACCCGCCGCACCTTCAGTAG+AGG | + | chr8.3:271196-271215 | MS.gene042056:CDS | 65.0% | |
| ACGGCCATGGCAGATTGGGG+TGG | + | chr8.3:273630-273649 | MS.gene042056:intron | 65.0% | |
| AGCCAGACGAGCCGTGGAAG+AGG | + | chr8.3:274800-274819 | MS.gene042056:CDS | 65.0% | |
| GCCAGACGAGCCGTGGAAGA+GGG | + | chr8.3:274801-274820 | MS.gene042056:CDS | 65.0% | |
| TCCCTCTTCCACGGCTCGTC+TGG | - | chr8.3:274805-274824 | None:intergenic | 65.0% | |
| TGCGGCGGGTCCACCAGAAA+AGG | - | chr8.3:271186-271205 | None:intergenic | 65.0% | |
| ! | TTGGCTGGAGGGGGGCTAGT+GGG | + | chr8.3:272762-272781 | MS.gene042056:intron | 65.0% |
| CGAGCCGTGGAAGAGGGACG+TGG | + | chr8.3:274807-274826 | MS.gene042056:CDS | 70.0% | |
| GTTGGCTGGAGGGGGGCTAG+TGG | + | chr8.3:272761-272780 | MS.gene042056:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 271163 | 275782 | 271163 | ID=MS.gene042056 |
| chr8.3 | mRNA | 271163 | 275782 | 271163 | ID=MS.gene042056.t1;Parent=MS.gene042056 |
| chr8.3 | exon | 271163 | 271817 | 271163 | ID=MS.gene042056.t1.exon1;Parent=MS.gene042056.t1 |
| chr8.3 | CDS | 271163 | 271817 | 271163 | ID=cds.MS.gene042056.t1;Parent=MS.gene042056.t1 |
| chr8.3 | exon | 271920 | 272146 | 271920 | ID=MS.gene042056.t1.exon2;Parent=MS.gene042056.t1 |
| chr8.3 | CDS | 271920 | 272146 | 271920 | ID=cds.MS.gene042056.t1;Parent=MS.gene042056.t1 |
| chr8.3 | exon | 274104 | 274229 | 274104 | ID=MS.gene042056.t1.exon3;Parent=MS.gene042056.t1 |
| chr8.3 | CDS | 274104 | 274229 | 274104 | ID=cds.MS.gene042056.t1;Parent=MS.gene042056.t1 |
| chr8.3 | exon | 274756 | 274941 | 274756 | ID=MS.gene042056.t1.exon4;Parent=MS.gene042056.t1 |
| chr8.3 | CDS | 274756 | 274941 | 274756 | ID=cds.MS.gene042056.t1;Parent=MS.gene042056.t1 |
| chr8.3 | exon | 275236 | 275373 | 275236 | ID=MS.gene042056.t1.exon5;Parent=MS.gene042056.t1 |
| chr8.3 | CDS | 275236 | 275373 | 275236 | ID=cds.MS.gene042056.t1;Parent=MS.gene042056.t1 |
| chr8.3 | exon | 275462 | 275782 | 275462 | ID=MS.gene042056.t1.exon6;Parent=MS.gene042056.t1 |
| chr8.3 | CDS | 275462 | 275782 | 275462 | ID=cds.MS.gene042056.t1;Parent=MS.gene042056.t1 |
| Gene Sequence |
| Protein sequence |
