Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042312.t1 | AES91969.2 | 98.8 | 579 | 7 | 0 | 1 | 579 | 1 | 579 | 9.90E-164 | 587 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042312.t1 | Q8RWG2 | 69.3 | 612 | 157 | 10 | 2 | 595 | 11 | 609 | 4.3e-59 | 230.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042312.t1 | G7JNW2 | 98.8 | 579 | 7 | 0 | 1 | 579 | 1 | 579 | 7.1e-164 | 587.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070492 | MS.gene042312 | PPI |
| MS.gene016742 | MS.gene042312 | PPI |
| MS.gene070510 | MS.gene042312 | PPI |
| MS.gene81622 | MS.gene042312 | PPI |
| MS.gene67840 | MS.gene042312 | PPI |
| MS.gene016743 | MS.gene042312 | PPI |
| MS.gene37911 | MS.gene042312 | PPI |
| MS.gene057884 | MS.gene042312 | PPI |
| MS.gene057883 | MS.gene042312 | PPI |
| MS.gene016758 | MS.gene042312 | PPI |
| MS.gene81617 | MS.gene042312 | PPI |
| MS.gene057886 | MS.gene042312 | PPI |
| MS.gene070509 | MS.gene042312 | PPI |
| MS.gene070503 | MS.gene042312 | PPI |
| MS.gene81620 | MS.gene042312 | PPI |
| MS.gene070505 | MS.gene042312 | PPI |
| MS.gene070511 | MS.gene042312 | PPI |
| MS.gene81615 | MS.gene042312 | PPI |
| MS.gene070507 | MS.gene042312 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042312.t1 | MTR_4g122060 | 97.927 | 579 | 12 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1182 |
| MS.gene042312.t1 | MTR_6g090890 | 24.161 | 298 | 210 | 8 | 233 | 518 | 68 | 361 | 1.19e-12 | 71.2 |
| MS.gene042312.t1 | MTR_5g009520 | 23.102 | 303 | 199 | 6 | 220 | 518 | 90 | 362 | 7.62e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene042312.t1 | AT3G17040 | 67.549 | 567 | 157 | 7 | 42 | 595 | 23 | 575 | 0.0 | 754 |
| MS.gene042312.t1 | AT3G17040 | 71.374 | 524 | 126 | 6 | 85 | 595 | 97 | 609 | 0.0 | 754 |
| MS.gene042312.t1 | AT3G17040 | 71.989 | 357 | 80 | 4 | 85 | 429 | 97 | 445 | 0.0 | 522 |
| MS.gene042312.t1 | AT3G17040 | 28.814 | 236 | 164 | 2 | 267 | 501 | 214 | 446 | 7.30e-26 | 111 |
| MS.gene042312.t1 | AT3G17040 | 30.769 | 234 | 158 | 2 | 274 | 506 | 187 | 417 | 1.88e-24 | 107 |
| MS.gene042312.t1 | AT3G17040 | 29.143 | 175 | 117 | 2 | 198 | 366 | 283 | 456 | 7.43e-17 | 84.0 |
| MS.gene042312.t1 | AT3G17040 | 26.066 | 211 | 118 | 3 | 300 | 509 | 179 | 352 | 8.84e-15 | 77.4 |
| MS.gene042312.t1 | AT3G17040 | 29.697 | 165 | 115 | 1 | 170 | 334 | 289 | 452 | 1.18e-13 | 73.9 |
| MS.gene042312.t1 | AT3G17040 | 66.500 | 400 | 111 | 5 | 42 | 429 | 23 | 411 | 0.0 | 520 |
| MS.gene042312.t1 | AT3G17040 | 29.237 | 236 | 163 | 2 | 267 | 501 | 180 | 412 | 2.84e-26 | 112 |
| MS.gene042312.t1 | AT3G17040 | 30.769 | 234 | 158 | 2 | 274 | 506 | 153 | 383 | 2.89e-24 | 106 |
| MS.gene042312.t1 | AT3G17040 | 24.545 | 220 | 162 | 3 | 300 | 518 | 145 | 361 | 1.90e-14 | 76.3 |
| MS.gene042312.t1 | AT4G03430 | 23.693 | 287 | 209 | 3 | 171 | 455 | 712 | 990 | 1.66e-15 | 80.9 |
| MS.gene042312.t1 | AT4G03430 | 23.693 | 287 | 209 | 3 | 171 | 455 | 712 | 990 | 1.66e-15 | 80.9 |
| MS.gene042312.t1 | AT4G03430 | 23.693 | 287 | 209 | 3 | 171 | 455 | 712 | 990 | 1.66e-15 | 80.9 |
| MS.gene042312.t1 | AT3G51110 | 23.891 | 293 | 207 | 7 | 239 | 518 | 55 | 344 | 1.20e-11 | 67.4 |
Find 160 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTGTTCTTGAAAAGAAAA+TGG | 0.199509 | 8.3:+7045827 | MS.gene042312:CDS |
| TTGAATTTGAAGAGATAGTT+TGG | 0.245768 | 8.3:-7038498 | None:intergenic |
| TTTGGACTTGGCGTTGTATA+AGG | 0.269191 | 8.3:+7038881 | MS.gene042312:CDS |
| CACAGTCAAAAGCTTATCTT+TGG | 0.274251 | 8.3:-7038856 | None:intergenic |
| TTGGCATGGTTGGGCAGTTC+TGG | 0.276320 | 8.3:+7045917 | MS.gene042312:CDS |
| CTTTCGGTGGAATGTAATTT+CGG | 0.278899 | 8.3:-7038647 | None:intergenic |
| ATAGGTTCGCTTGGCATGTC+TGG | 0.285070 | 8.3:+7046453 | MS.gene042312:CDS |
| TGAAGAATGGAAGGGTAAAA+TGG | 0.288692 | 8.3:-7038532 | None:intergenic |
| CTTGGTCGCCATATCCTTCT+TGG | 0.297552 | 8.3:-7048656 | None:intergenic |
| AATGCAGGCATGGGGTGTTC+TGG | 0.316093 | 8.3:+7047462 | MS.gene042312:intron |
| CCATCAAAGTTTGAGTCTTT+CGG | 0.318205 | 8.3:-7038663 | None:intergenic |
| CTCCGGTGAGGAGGTGAAAA+AGG | 0.321280 | 8.3:+7038725 | MS.gene042312:CDS |
| AGATGATGCTTCGTGGGTTA+TGG | 0.321698 | 8.3:+7048355 | MS.gene042312:CDS |
| ACTCTCCCCGGTTCAAATAT+CGG | 0.323023 | 8.3:-7038822 | None:intergenic |
| CATGGAAGTGTTTAAGCTAT+TGG | 0.323518 | 8.3:+7039257 | MS.gene042312:intron |
| ACGAATTCGGGTCCATCTTC+AGG | 0.327301 | 8.3:-7048424 | None:intergenic |
| TTCCAGCTTGGACACATCTA+TGG | 0.347001 | 8.3:-7048585 | None:intergenic |
| CCGAAAGACTCAAACTTTGA+TGG | 0.349286 | 8.3:+7038663 | MS.gene042312:CDS |
| GGTGGCACATTGAACGAATT+CGG | 0.357011 | 8.3:-7048437 | None:intergenic |
| ATCCCAGGCATCAACCTGTT+TGG | 0.362989 | 8.3:+7046648 | MS.gene042312:CDS |
| TTGTTCGTAGAAGGAAATTT+CGG | 0.364988 | 8.3:-7048623 | None:intergenic |
| GTTGTATAAGGCTAAGGTTT+TGG | 0.365989 | 8.3:+7038893 | MS.gene042312:CDS |
| TTTCGGTGGAATGTAATTTC+GGG | 0.367593 | 8.3:-7038646 | None:intergenic |
| GGCTCGATATTTATTCAATC+AGG | 0.377634 | 8.3:+7046067 | MS.gene042312:CDS |
| CTAATAGGCTTGGGCTCAAA+TGG | 0.378024 | 8.3:+7046226 | MS.gene042312:intron |
| GGCTCAAATGGAGGTGGAAC+AGG | 0.382782 | 8.3:+7046238 | MS.gene042312:CDS |
| GTTCAAGAGAGCATCTGAAT+TGG | 0.383806 | 8.3:+7046625 | MS.gene042312:CDS |
| GTAATTTCGGGTACTCTTCT+CGG | 0.391728 | 8.3:-7038634 | None:intergenic |
| GGAAGAAAACTTCTAAAGAT+AGG | 0.396553 | 8.3:+7046512 | MS.gene042312:CDS |
| GCAGAGGGTTGGCAATCTTT+CGG | 0.407854 | 8.3:+7047486 | MS.gene042312:CDS |
| CTTCAAGCAATGCAAGTGTT+TGG | 0.413000 | 8.3:-7046022 | None:intergenic |
| ACCCTGCCATTGACAGTTTG+AGG | 0.415164 | 8.3:+7048396 | MS.gene042312:CDS |
| GTCCAAGCTGGAAGTTCAAC+TGG | 0.415566 | 8.3:+7048595 | MS.gene042312:CDS |
| CTCCTCAAACTGTCAATGGC+AGG | 0.426754 | 8.3:-7048398 | None:intergenic |
| TGAATTTGAAGAGATAGTTT+GGG | 0.428632 | 8.3:-7038497 | None:intergenic |
| GTAATATTTCTCATGGAATC+AGG | 0.428842 | 8.3:-7048458 | None:intergenic |
| ACATAAAGCCTACCATCTTC+AGG | 0.430007 | 8.3:-7039280 | None:intergenic |
| GATGAAGAAGGTGGAGGAGA+GGG | 0.430756 | 8.3:-7038441 | None:intergenic |
| TGTTGCTGCTTGGCATGGTT+GGG | 0.433975 | 8.3:+7045908 | MS.gene042312:CDS |
| ATGCACCGTGTTGCACTCTC+AGG | 0.434151 | 8.3:+7038574 | MS.gene042312:CDS |
| GGAGAAGGAAATTGTGAAAG+AGG | 0.436595 | 8.3:+7038746 | MS.gene042312:CDS |
| TAGTTACCTGCTGGAAGTAA+AGG | 0.442310 | 8.3:-7047630 | None:intergenic |
| GTGGCACATTGAACGAATTC+GGG | 0.446188 | 8.3:-7048436 | None:intergenic |
| GCTGTTCTTGAAAAGAAAAT+GGG | 0.446389 | 8.3:+7045828 | MS.gene042312:CDS |
| GATTTATGAGAAGGGTTGCC+AGG | 0.448335 | 8.3:+7039354 | MS.gene042312:CDS |
| TGAGTGAGAATTGTAGAACT+TGG | 0.448533 | 8.3:-7038465 | None:intergenic |
| AGGGTGAAAATGCATTCATT+TGG | 0.448950 | 8.3:+7039383 | MS.gene042312:CDS |
| GAAGATGCCGATATTTGAAC+CGG | 0.449593 | 8.3:+7038815 | MS.gene042312:CDS |
| GAAGAATGGAAGGGTAAAAT+GGG | 0.451235 | 8.3:-7038531 | None:intergenic |
| ATGGATGACTTGGGCATCAC+TGG | 0.453367 | 8.3:+7047564 | MS.gene042312:CDS |
| GAAGGGTTGCCAGGCTACTC+AGG | 0.453699 | 8.3:+7039363 | MS.gene042312:CDS |
| AAGGTTCTTCAATTGATGTC+GGG | 0.462649 | 8.3:+7038775 | MS.gene042312:CDS |
| TGAGGTGGGAAGATGAAGAA+TGG | 0.465047 | 8.3:-7038545 | None:intergenic |
| GATGATGCTTCGTGGGTTAT+GGG | 0.466333 | 8.3:+7048356 | MS.gene042312:CDS |
| ATGGAACGCTCGTGGTTCGC+CGG | 0.467163 | 8.3:+7038682 | MS.gene042312:CDS |
| GGGTACTCTTCTCGGAGGGA+GGG | 0.468443 | 8.3:-7038626 | None:intergenic |
| ATCCTAAAAGCTGTGCTAGT+TGG | 0.470170 | 8.3:+7046102 | MS.gene042312:CDS |
| AAAAGAAAATGGGAAATGTC+AGG | 0.470264 | 8.3:+7045838 | MS.gene042312:CDS |
| TGGTTGGCAGTTCTACTACT+TGG | 0.472252 | 8.3:-7048674 | None:intergenic |
| TACCGCTAGGAAATTGTTTG+AGG | 0.473394 | 8.3:+7046271 | MS.gene042312:CDS |
| CGGGTACTCTTCTCGGAGGG+AGG | 0.474423 | 8.3:-7038627 | None:intergenic |
| TTCCCTTGTCAATCTTGCCC+AGG | 0.474487 | 8.3:-7046493 | None:intergenic |
| TTTGACTGTGAATTTGGACT+TGG | 0.475255 | 8.3:+7038869 | MS.gene042312:CDS |
| AACGCTCGTGGTTCGCCGGC+CGG | 0.475760 | 8.3:+7038686 | MS.gene042312:CDS |
| GGTACTCTTCTCGGAGGGAG+GGG | 0.477660 | 8.3:-7038625 | None:intergenic |
| GATTCCATGAGAAATATTAC+CGG | 0.481747 | 8.3:+7048461 | MS.gene042312:CDS |
| TGAAAATGCATTCATTTGGC+AGG | 0.484233 | 8.3:+7039387 | MS.gene042312:CDS |
| TAGGTTCGCTTGGCATGTCT+GGG | 0.485244 | 8.3:+7046454 | MS.gene042312:CDS |
| GAGTCTGATTCGACTCTCCC+CGG | 0.486099 | 8.3:-7038834 | None:intergenic |
| AGATGAAGAAGGTGGAGGAG+AGG | 0.487422 | 8.3:-7038442 | None:intergenic |
| ACTTGCATTGCTTGAAGCTA+AGG | 0.488961 | 8.3:+7046028 | MS.gene042312:CDS |
| ATGTTGCTGCTTGGCATGGT+TGG | 0.489445 | 8.3:+7045907 | MS.gene042312:CDS |
| AGGCTTGGGGTTGGATGGAA+TGG | 0.489500 | 8.3:+7047258 | MS.gene042312:intron |
| GAGTCTCCTCAAACTGTCAA+TGG | 0.490117 | 8.3:-7048402 | None:intergenic |
| CTTGGCGTTGTATAAGGCTA+AGG | 0.495715 | 8.3:+7038887 | MS.gene042312:CDS |
| TCGTAACCTTTACTTCCAGC+AGG | 0.496782 | 8.3:+7047624 | MS.gene042312:CDS |
| TCGAAAGGTCTTCAATATTG+TGG | 0.498161 | 8.3:+7045981 | MS.gene042312:CDS |
| AACCAAACAGGTTGATGCCT+GGG | 0.503303 | 8.3:-7046650 | None:intergenic |
| TTCCAGTTGAACTTCCAGCT+TGG | 0.505485 | 8.3:-7048597 | None:intergenic |
| TTAAGCTATTGGCCTGAAGA+TGG | 0.505942 | 8.3:+7039268 | MS.gene042312:CDS |
| CAGGGACTCAACTTCAGTGT+TGG | 0.507530 | 8.3:+7038593 | MS.gene042312:CDS |
| GTTGCAGGCTTGGGGTTGGA+TGG | 0.508516 | 8.3:+7047253 | MS.gene042312:intron |
| CATGGGGTGTTCTGGAGCAG+AGG | 0.509511 | 8.3:+7047470 | MS.gene042312:CDS |
| AGCTAGAGAGATTTATGAGA+AGG | 0.510163 | 8.3:+7039345 | MS.gene042312:CDS |
| CTTGGAGATGAAGAAGGTGG+AGG | 0.513126 | 8.3:-7038447 | None:intergenic |
| AAGCCACTTACAAACCAAAC+AGG | 0.513611 | 8.3:-7046662 | None:intergenic |
| ATGGGGTGTTCTGGAGCAGA+GGG | 0.520442 | 8.3:+7047471 | MS.gene042312:CDS |
| CGATCCGGTAATATTTCTCA+TGG | 0.522147 | 8.3:-7048465 | None:intergenic |
| ATCCATAGATGTGTCCAAGC+TGG | 0.527168 | 8.3:+7048583 | MS.gene042312:CDS |
| TTTGAGGAGACTCCTGAAGA+TGG | 0.527639 | 8.3:+7048412 | MS.gene042312:CDS |
| TTGGGGTTGGATGGAATGGA+AGG | 0.528475 | 8.3:+7047262 | MS.gene042312:CDS |
| AAAGGTTCTTCAATTGATGT+CGG | 0.529046 | 8.3:+7038774 | MS.gene042312:CDS |
| AAACCAAACAGGTTGATGCC+TGG | 0.535498 | 8.3:-7046651 | None:intergenic |
| CGAATTTCTTCAGCACGCAC+AGG | 0.537682 | 8.3:-7047604 | None:intergenic |
| GAGCATCTGAATTGGATCCC+AGG | 0.540159 | 8.3:+7046633 | MS.gene042312:CDS |
| GTGGGAAGATGAAGAATGGA+AGG | 0.540617 | 8.3:-7038541 | None:intergenic |
| GGTTGGATGGAATGGAAGGA+AGG | 0.544841 | 8.3:+7047266 | MS.gene042312:CDS |
| CATCCCTTGGATTTAGAGCA+TGG | 0.545663 | 8.3:-7046535 | None:intergenic |
| TGAAGGAGAACAGCATCCCT+TGG | 0.546657 | 8.3:-7046548 | None:intergenic |
| GAGTGCTGCAAGGTGTCTCC+AGG | 0.548963 | 8.3:+7047349 | MS.gene042312:CDS |
| AAATGTTGCAGGCTTGGGGT+TGG | 0.552264 | 8.3:+7047249 | MS.gene042312:intron |
| ACTTAAATGTTGCAGGCTTG+GGG | 0.552801 | 8.3:+7047245 | MS.gene042312:intron |
| GGCTTGGGCTCAAATGGAGG+TGG | 0.554574 | 8.3:+7046232 | MS.gene042312:intron |
| AAGTTGTAGATGATGCTTCG+TGG | 0.557897 | 8.3:+7048348 | MS.gene042312:CDS |
| GGTAGGCTTTATGTTGCACT+CGG | 0.558214 | 8.3:+7039289 | MS.gene042312:CDS |
| ATAAGAAACATGTTGCTGCT+TGG | 0.562764 | 8.3:+7045898 | MS.gene042312:CDS |
| GCTAGAGAGATTTATGAGAA+GGG | 0.568643 | 8.3:+7039346 | MS.gene042312:CDS |
| GAACTTGGAGATGAAGAAGG+TGG | 0.568927 | 8.3:-7038450 | None:intergenic |
| AGTTGTAGATGATGCTTCGT+GGG | 0.575012 | 8.3:+7048349 | MS.gene042312:CDS |
| TCAAAGTTTGAGTCTTTCGG+TGG | 0.575726 | 8.3:-7038660 | None:intergenic |
| TCCTCAAACTGTCAATGGCA+GGG | 0.577336 | 8.3:-7048397 | None:intergenic |
| TAAGGCGAATAGATATCAGC+AGG | 0.578086 | 8.3:+7046046 | MS.gene042312:CDS |
| GTTATGTGACATGGATGACT+TGG | 0.580592 | 8.3:+7047554 | MS.gene042312:CDS |
| GTAGAACTTGGAGATGAAGA+AGG | 0.581057 | 8.3:-7038453 | None:intergenic |
| GGTGTTCTGGAGCAGAGGGT+TGG | 0.581149 | 8.3:+7047475 | MS.gene042312:CDS |
| GCATCACTGGAGGAAGATCA+AGG | 0.582111 | 8.3:+7047577 | MS.gene042312:CDS |
| TAGGCCATGCTCTAAATCCA+AGG | 0.584053 | 8.3:+7046531 | MS.gene042312:CDS |
| GCTATTGGCCTGAAGATGGT+AGG | 0.590366 | 8.3:+7039272 | MS.gene042312:CDS |
| TTATGAATAGAATGCAGTGC+AGG | 0.596113 | 8.3:+7046418 | MS.gene042312:intron |
| CGGTGAAAACTCCGGTGAGG+AGG | 0.598822 | 8.3:+7038716 | MS.gene042312:CDS |
| GCAAGGAATCTGCTTTCGAA+AGG | 0.604942 | 8.3:+7045966 | MS.gene042312:CDS |
| AAACTTTGATGGAACGCTCG+TGG | 0.605330 | 8.3:+7038674 | MS.gene042312:CDS |
| ATTCTCAGAGTTATGTGACA+TGG | 0.605787 | 8.3:+7047545 | MS.gene042312:CDS |
| AGCAGAGGAAATGCTTCTGA+AGG | 0.612307 | 8.3:+7038938 | MS.gene042312:CDS |
| CTATTAATGCAAGAGACTGA+AGG | 0.615485 | 8.3:-7046565 | None:intergenic |
| CTTTCGTTATCAAGAAGCAG+AGG | 0.617149 | 8.3:+7038923 | MS.gene042312:CDS |
| TGCACCGTGTTGCACTCTCA+GGG | 0.617357 | 8.3:+7038575 | MS.gene042312:CDS |
| AAGATGCCGATATTTGAACC+GGG | 0.617807 | 8.3:+7038816 | MS.gene042312:CDS |
| AAGGGTTGCCAGGCTACTCA+GGG | 0.619016 | 8.3:+7039364 | MS.gene042312:CDS |
| AAGGAAATATAACGAAGGCA+AGG | 0.619314 | 8.3:+7045949 | MS.gene042312:CDS |
| AGGGTAAAATGGGAACTTTG+AGG | 0.621281 | 8.3:-7038521 | None:intergenic |
| AGGAAAACTATCGTACCGCT+AGG | 0.622711 | 8.3:+7046258 | MS.gene042312:CDS |
| GCAGTTCTGGAGTTAAAGCA+AGG | 0.624049 | 8.3:+7045930 | MS.gene042312:CDS |
| TTTCACCGGAAAACTCCGGC+CGG | 0.625296 | 8.3:-7038701 | None:intergenic |
| AAACATGTTGCTGCTTGGCA+TGG | 0.627009 | 8.3:+7045903 | MS.gene042312:CDS |
| CGGTGCATGTGCAGTGAGGT+GGG | 0.629658 | 8.3:-7038559 | None:intergenic |
| ACGGTGCATGTGCAGTGAGG+TGG | 0.632473 | 8.3:-7038560 | None:intergenic |
| TTTCGGGTACTCTTCTCGGA+GGG | 0.633084 | 8.3:-7038630 | None:intergenic |
| GTAGGCTTTATGTTGCACTC+GGG | 0.637441 | 8.3:+7039290 | MS.gene042312:CDS |
| ATAGGCTTGGGCTCAAATGG+AGG | 0.638738 | 8.3:+7046229 | MS.gene042312:intron |
| ATTGTGAAAGAGGAAGCTAA+AGG | 0.639379 | 8.3:+7038756 | MS.gene042312:CDS |
| TAACCTGGGCAAGATTGACA+AGG | 0.641649 | 8.3:+7046490 | MS.gene042312:CDS |
| GATGACTTGGGCATCACTGG+AGG | 0.641810 | 8.3:+7047567 | MS.gene042312:CDS |
| TTTCTTATCAGCAACCGTTG+CGG | 0.644090 | 8.3:-7045883 | None:intergenic |
| AGGCCATGCTCTAAATCCAA+GGG | 0.645369 | 8.3:+7046532 | MS.gene042312:CDS |
| TGGGAAGATGAAGAATGGAA+GGG | 0.652700 | 8.3:-7038540 | None:intergenic |
| TTTCATATAATGCAGGCATG+GGG | 0.657586 | 8.3:+7047454 | MS.gene042312:intron |
| ATTTCGGGTACTCTTCTCGG+AGG | 0.661892 | 8.3:-7038631 | None:intergenic |
| TTCCGGTGAAAACTCCGGTG+AGG | 0.671694 | 8.3:+7038713 | MS.gene042312:CDS |
| ATATTTCTCATGGAATCAGG+TGG | 0.677602 | 8.3:-7048455 | None:intergenic |
| AAAGCAAGGAAATATAACGA+AGG | 0.687573 | 8.3:+7045944 | MS.gene042312:CDS |
| AACCTGGGCAAGATTGACAA+GGG | 0.688091 | 8.3:+7046491 | MS.gene042312:CDS |
| AGGTTCGCTTGGCATGTCTG+GGG | 0.690635 | 8.3:+7046455 | MS.gene042312:CDS |
| CGAACAGTGAGAGTGCTGCA+AGG | 0.690642 | 8.3:+7047339 | MS.gene042312:CDS |
| AGATGCCGATATTTGAACCG+GGG | 0.693362 | 8.3:+7038817 | MS.gene042312:CDS |
| TTATGTGACATGGATGACTT+GGG | 0.702914 | 8.3:+7047555 | MS.gene042312:CDS |
| CTGAGAATTTATATTCAACG+AGG | 0.719216 | 8.3:-7047530 | None:intergenic |
| AACCTCAAACAATTTCCTAG+CGG | 0.720299 | 8.3:-7046273 | None:intergenic |
| AACACGGTGCATGTGCAGTG+AGG | 0.727076 | 8.3:-7038563 | None:intergenic |
| GAGTCCCTGAGAGTGCAACA+CGG | 0.729774 | 8.3:-7038579 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 7038429 | 7048681 | 7038429 | ID=MS.gene042312 |
| chr8.3 | mRNA | 7038429 | 7048681 | 7038429 | ID=MS.gene042312.t1;Parent=MS.gene042312 |
| chr8.3 | exon | 7038429 | 7038959 | 7038429 | ID=MS.gene042312.t1.exon1;Parent=MS.gene042312.t1 |
| chr8.3 | CDS | 7038429 | 7038959 | 7038429 | ID=cds.MS.gene042312.t1;Parent=MS.gene042312.t1 |
| chr8.3 | exon | 7039265 | 7039408 | 7039265 | ID=MS.gene042312.t1.exon2;Parent=MS.gene042312.t1 |
| chr8.3 | CDS | 7039265 | 7039408 | 7039265 | ID=cds.MS.gene042312.t1;Parent=MS.gene042312.t1 |
| chr8.3 | exon | 7045822 | 7046127 | 7045822 | ID=MS.gene042312.t1.exon3;Parent=MS.gene042312.t1 |
| chr8.3 | CDS | 7045822 | 7046127 | 7045822 | ID=cds.MS.gene042312.t1;Parent=MS.gene042312.t1 |
| chr8.3 | exon | 7046233 | 7046292 | 7046233 | ID=MS.gene042312.t1.exon4;Parent=MS.gene042312.t1 |
| chr8.3 | CDS | 7046233 | 7046292 | 7046233 | ID=cds.MS.gene042312.t1;Parent=MS.gene042312.t1 |
| chr8.3 | exon | 7046428 | 7046673 | 7046428 | ID=MS.gene042312.t1.exon5;Parent=MS.gene042312.t1 |
| chr8.3 | CDS | 7046428 | 7046673 | 7046428 | ID=cds.MS.gene042312.t1;Parent=MS.gene042312.t1 |
| chr8.3 | exon | 7047260 | 7047370 | 7047260 | ID=MS.gene042312.t1.exon6;Parent=MS.gene042312.t1 |
| chr8.3 | CDS | 7047260 | 7047370 | 7047260 | ID=cds.MS.gene042312.t1;Parent=MS.gene042312.t1 |
| chr8.3 | exon | 7047469 | 7047645 | 7047469 | ID=MS.gene042312.t1.exon7;Parent=MS.gene042312.t1 |
| chr8.3 | CDS | 7047469 | 7047645 | 7047469 | ID=cds.MS.gene042312.t1;Parent=MS.gene042312.t1 |
| chr8.3 | exon | 7048341 | 7048499 | 7048341 | ID=MS.gene042312.t1.exon8;Parent=MS.gene042312.t1 |
| chr8.3 | CDS | 7048341 | 7048499 | 7048341 | ID=cds.MS.gene042312.t1;Parent=MS.gene042312.t1 |
| chr8.3 | exon | 7048580 | 7048681 | 7048580 | ID=MS.gene042312.t1.exon9;Parent=MS.gene042312.t1 |
| chr8.3 | CDS | 7048580 | 7048681 | 7048580 | ID=cds.MS.gene042312.t1;Parent=MS.gene042312.t1 |
| Gene Sequence |
| Protein sequence |
