Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043043.t1 | XP_003605420.2 | 96 | 323 | 12 | 1 | 1 | 323 | 22 | 343 | 7.30E-174 | 619.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043043.t1 | Q9SJZ2 | 73.6 | 311 | 81 | 1 | 1 | 311 | 17 | 326 | 5.3e-133 | 475.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043043.t1 | G7JKV1 | 96.0 | 323 | 12 | 1 | 1 | 323 | 22 | 343 | 5.2e-174 | 619.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene043043 | MS.gene32635 | PPI |
MS.gene014836 | MS.gene043043 | PPI |
MS.gene043043 | MS.gene35853 | PPI |
MS.gene043043 | MS.gene015231 | PPI |
MS.gene20276 | MS.gene043043 | PPI |
MS.gene24236 | MS.gene043043 | PPI |
MS.gene043043 | MS.gene57204 | PPI |
MS.gene67066 | MS.gene043043 | PPI |
MS.gene27263 | MS.gene043043 | PPI |
MS.gene043043 | MS.gene072888 | PPI |
MS.gene043043 | MS.gene27001 | PPI |
MS.gene35931 | MS.gene043043 | PPI |
MS.gene90718 | MS.gene043043 | PPI |
MS.gene32715 | MS.gene043043 | PPI |
MS.gene043043 | MS.gene44482 | PPI |
MS.gene35795 | MS.gene043043 | PPI |
MS.gene043043 | MS.gene80170 | PPI |
MS.gene09575 | MS.gene043043 | PPI |
MS.gene029047 | MS.gene043043 | PPI |
MS.gene014924 | MS.gene043043 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043043.t1 | MTR_4g031140 | 96.273 | 322 | 11 | 1 | 2 | 323 | 23 | 343 | 0.0 | 636 |
MS.gene043043.t1 | MTR_4g030890 | 82.866 | 321 | 54 | 1 | 3 | 323 | 96 | 415 | 0.0 | 564 |
MS.gene043043.t1 | MTR_8g076820 | 47.811 | 297 | 151 | 3 | 11 | 303 | 34 | 330 | 3.19e-96 | 288 |
MS.gene043043.t1 | MTR_3g072190 | 47.333 | 300 | 148 | 3 | 7 | 303 | 26 | 318 | 1.81e-95 | 286 |
MS.gene043043.t1 | MTR_3g094650 | 47.020 | 302 | 148 | 4 | 4 | 300 | 25 | 319 | 4.13e-95 | 285 |
MS.gene043043.t1 | MTR_5g021060 | 46.801 | 297 | 154 | 3 | 11 | 303 | 34 | 330 | 7.67e-93 | 279 |
MS.gene043043.t1 | MTR_3g466200 | 46.906 | 307 | 150 | 5 | 3 | 303 | 21 | 320 | 1.77e-92 | 278 |
MS.gene043043.t1 | MTR_2g029800 | 45.752 | 306 | 161 | 3 | 5 | 305 | 27 | 332 | 3.82e-92 | 278 |
MS.gene043043.t1 | MTR_2g040000 | 46.278 | 309 | 156 | 4 | 4 | 304 | 26 | 332 | 1.47e-90 | 273 |
MS.gene043043.t1 | MTR_2g029740 | 44.481 | 308 | 166 | 3 | 3 | 305 | 25 | 332 | 3.88e-90 | 273 |
MS.gene043043.t1 | MTR_5g083860 | 46.711 | 304 | 150 | 4 | 5 | 303 | 29 | 325 | 2.37e-89 | 270 |
MS.gene043043.t1 | MTR_5g074970 | 46.926 | 309 | 144 | 6 | 5 | 303 | 28 | 326 | 3.42e-89 | 270 |
MS.gene043043.t1 | MTR_2g028980 | 43.871 | 310 | 169 | 3 | 1 | 305 | 23 | 332 | 6.88e-89 | 270 |
MS.gene043043.t1 | MTR_7g093370 | 43.506 | 308 | 168 | 4 | 3 | 304 | 65 | 372 | 1.36e-88 | 270 |
MS.gene043043.t1 | MTR_2g029750 | 43.831 | 308 | 168 | 3 | 3 | 305 | 25 | 332 | 2.40e-88 | 269 |
MS.gene043043.t1 | MTR_5g074860 | 46.906 | 307 | 149 | 5 | 3 | 302 | 25 | 324 | 4.95e-88 | 267 |
MS.gene043043.t1 | MTR_4g122640 | 43.607 | 305 | 166 | 4 | 3 | 303 | 34 | 336 | 8.32e-88 | 266 |
MS.gene043043.t1 | MTR_1g101830 | 45.215 | 303 | 163 | 3 | 2 | 303 | 22 | 322 | 4.55e-87 | 264 |
MS.gene043043.t1 | MTR_4g125940 | 43.322 | 307 | 165 | 4 | 5 | 304 | 26 | 330 | 4.65e-86 | 262 |
MS.gene043043.t1 | MTR_4g029170 | 46.078 | 306 | 153 | 5 | 3 | 303 | 23 | 321 | 7.11e-86 | 261 |
MS.gene043043.t1 | MTR_1g022970 | 45.902 | 305 | 160 | 3 | 4 | 303 | 43 | 347 | 7.54e-86 | 262 |
MS.gene043043.t1 | MTR_5g074760 | 45.455 | 308 | 154 | 5 | 3 | 303 | 21 | 321 | 3.04e-85 | 259 |
MS.gene043043.t1 | MTR_2g029815 | 42.857 | 308 | 171 | 3 | 3 | 305 | 25 | 332 | 3.44e-85 | 260 |
MS.gene043043.t1 | MTR_5g074740 | 46.104 | 308 | 152 | 5 | 3 | 303 | 21 | 321 | 3.53e-85 | 259 |
MS.gene043043.t1 | MTR_3g094670 | 45.724 | 304 | 153 | 4 | 5 | 303 | 26 | 322 | 4.40e-85 | 259 |
MS.gene043043.t1 | MTR_7g026990 | 44.595 | 296 | 155 | 2 | 11 | 304 | 35 | 323 | 8.98e-85 | 258 |
MS.gene043043.t1 | MTR_3g094630 | 46.382 | 304 | 151 | 4 | 5 | 303 | 26 | 322 | 9.50e-85 | 258 |
MS.gene043043.t1 | MTR_2g084080 | 44.079 | 304 | 160 | 3 | 3 | 303 | 21 | 317 | 1.74e-84 | 258 |
MS.gene043043.t1 | MTR_5g074710 | 45.779 | 308 | 153 | 5 | 3 | 303 | 21 | 321 | 1.96e-84 | 258 |
MS.gene043043.t1 | MTR_5g049280 | 44.625 | 307 | 160 | 5 | 7 | 304 | 33 | 338 | 2.05e-84 | 258 |
MS.gene043043.t1 | MTR_4g083710 | 44.013 | 309 | 160 | 5 | 2 | 303 | 22 | 324 | 2.09e-84 | 258 |
MS.gene043043.t1 | MTR_4g029180 | 46.309 | 298 | 148 | 5 | 11 | 303 | 31 | 321 | 5.00e-84 | 256 |
MS.gene043043.t1 | MTR_2g084010 | 44.590 | 305 | 158 | 4 | 3 | 303 | 21 | 318 | 6.81e-84 | 256 |
MS.gene043043.t1 | MTR_2g084110 | 45.246 | 305 | 155 | 5 | 3 | 303 | 21 | 317 | 7.51e-84 | 256 |
MS.gene043043.t1 | MTR_2g029820 | 42.208 | 308 | 173 | 3 | 3 | 305 | 25 | 332 | 3.10e-83 | 256 |
MS.gene043043.t1 | MTR_2g084090 | 43.607 | 305 | 161 | 4 | 3 | 303 | 21 | 318 | 3.14e-83 | 254 |
MS.gene043043.t1 | MTR_1g054205 | 40.584 | 308 | 177 | 4 | 3 | 304 | 20 | 327 | 4.78e-83 | 254 |
MS.gene043043.t1 | MTR_2g084020 | 43.607 | 305 | 161 | 4 | 3 | 303 | 21 | 318 | 5.71e-83 | 254 |
MS.gene043043.t1 | MTR_4g029200 | 43.377 | 302 | 161 | 3 | 5 | 303 | 44 | 338 | 2.52e-82 | 253 |
MS.gene043043.t1 | MTR_2g029830 | 41.967 | 305 | 172 | 3 | 5 | 304 | 26 | 330 | 4.85e-82 | 253 |
MS.gene043043.t1 | MTR_2g029560 | 42.623 | 305 | 170 | 3 | 5 | 304 | 22 | 326 | 7.11e-82 | 252 |
MS.gene043043.t1 | MTR_3g466180 | 45.098 | 306 | 158 | 3 | 1 | 303 | 25 | 323 | 7.40e-82 | 251 |
MS.gene043043.t1 | MTR_5g014100 | 44.156 | 308 | 159 | 5 | 7 | 303 | 26 | 331 | 8.21e-82 | 251 |
MS.gene043043.t1 | MTR_2g029850 | 41.284 | 327 | 182 | 4 | 3 | 319 | 25 | 351 | 1.70e-81 | 251 |
MS.gene043043.t1 | MTR_5g017850 | 43.648 | 307 | 166 | 5 | 2 | 303 | 22 | 326 | 4.91e-81 | 249 |
MS.gene043043.t1 | MTR_2g029860 | 40.260 | 308 | 179 | 3 | 3 | 305 | 25 | 332 | 2.23e-80 | 248 |
MS.gene043043.t1 | MTR_7g072510 | 42.295 | 305 | 166 | 3 | 2 | 303 | 15 | 312 | 2.53e-80 | 247 |
MS.gene043043.t1 | MTR_2g029730 | 43.464 | 306 | 166 | 4 | 5 | 304 | 23 | 327 | 1.61e-79 | 246 |
MS.gene043043.t1 | MTR_2g084000 | 41.447 | 304 | 167 | 4 | 4 | 303 | 23 | 319 | 1.68e-79 | 245 |
MS.gene043043.t1 | MTR_2g029910 | 40.125 | 319 | 185 | 4 | 3 | 315 | 26 | 344 | 2.83e-79 | 245 |
MS.gene043043.t1 | MTR_5g017860 | 43.092 | 304 | 166 | 5 | 5 | 303 | 25 | 326 | 5.29e-79 | 244 |
MS.gene043043.t1 | MTR_4g125940 | 44.203 | 276 | 145 | 4 | 36 | 304 | 2 | 275 | 7.13e-79 | 242 |
MS.gene043043.t1 | MTR_4g074995 | 42.395 | 309 | 152 | 6 | 2 | 303 | 19 | 308 | 7.81e-79 | 243 |
MS.gene043043.t1 | MTR_4g029190 | 42.810 | 306 | 162 | 5 | 4 | 303 | 42 | 340 | 6.10e-78 | 241 |
MS.gene043043.t1 | MTR_3g072190 | 46.693 | 257 | 127 | 3 | 50 | 303 | 2 | 251 | 8.05e-78 | 238 |
MS.gene043043.t1 | MTR_8g075100 | 41.914 | 303 | 169 | 5 | 3 | 303 | 22 | 319 | 1.57e-77 | 240 |
MS.gene043043.t1 | MTR_1g025980 | 41.667 | 300 | 171 | 4 | 4 | 302 | 21 | 317 | 3.96e-77 | 239 |
MS.gene043043.t1 | MTR_4g074990 | 41.883 | 308 | 152 | 5 | 2 | 303 | 19 | 305 | 4.38e-77 | 238 |
MS.gene043043.t1 | MTR_7g072480 | 43.564 | 303 | 161 | 3 | 4 | 303 | 21 | 316 | 4.68e-77 | 238 |
MS.gene043043.t1 | MTR_4g133800 | 42.617 | 298 | 159 | 7 | 10 | 303 | 44 | 333 | 8.49e-77 | 238 |
MS.gene043043.t1 | MTR_3g467600 | 42.395 | 309 | 163 | 6 | 3 | 303 | 23 | 324 | 1.82e-76 | 237 |
MS.gene043043.t1 | MTR_1g115900 | 40.968 | 310 | 169 | 5 | 1 | 304 | 21 | 322 | 2.46e-76 | 237 |
MS.gene043043.t1 | MTR_0155s0040 | 40.132 | 304 | 170 | 5 | 2 | 303 | 22 | 315 | 3.64e-75 | 234 |
MS.gene043043.t1 | MTR_1g077000 | 41.472 | 299 | 163 | 5 | 7 | 303 | 39 | 327 | 3.70e-75 | 234 |
MS.gene043043.t1 | MTR_5g022870 | 41.060 | 302 | 173 | 4 | 3 | 303 | 19 | 316 | 2.69e-74 | 231 |
MS.gene043043.t1 | MTR_4g046713 | 39.016 | 305 | 181 | 4 | 3 | 303 | 23 | 326 | 5.13e-73 | 228 |
MS.gene043043.t1 | MTR_7g086820 | 38.835 | 309 | 169 | 6 | 5 | 305 | 18 | 314 | 1.79e-72 | 227 |
MS.gene043043.t1 | MTR_7g029030 | 41.391 | 302 | 166 | 6 | 7 | 303 | 25 | 320 | 3.77e-72 | 226 |
MS.gene043043.t1 | MTR_2g437770 | 41.611 | 298 | 161 | 6 | 11 | 304 | 54 | 342 | 5.72e-72 | 226 |
MS.gene043043.t1 | MTR_4g087965 | 41.424 | 309 | 157 | 8 | 7 | 299 | 42 | 342 | 1.22e-71 | 226 |
MS.gene043043.t1 | MTR_3g092990 | 38.816 | 304 | 182 | 3 | 5 | 304 | 24 | 327 | 1.49e-71 | 225 |
MS.gene043043.t1 | MTR_2g088770 | 39.542 | 306 | 178 | 6 | 3 | 303 | 22 | 325 | 1.21e-70 | 222 |
MS.gene043043.t1 | MTR_1g009750 | 38.562 | 306 | 181 | 5 | 4 | 303 | 24 | 328 | 1.60e-70 | 222 |
MS.gene043043.t1 | MTR_5g016010 | 37.582 | 306 | 185 | 4 | 3 | 302 | 23 | 328 | 2.07e-70 | 222 |
MS.gene043043.t1 | MTR_7g107520 | 38.333 | 300 | 178 | 5 | 7 | 303 | 25 | 320 | 1.29e-69 | 219 |
MS.gene043043.t1 | MTR_4g074980 | 40.199 | 301 | 149 | 5 | 5 | 303 | 23 | 294 | 1.80e-69 | 218 |
MS.gene043043.t1 | MTR_4g074980 | 46.414 | 237 | 117 | 3 | 5 | 237 | 23 | 253 | 1.12e-68 | 215 |
MS.gene043043.t1 | MTR_7g086870 | 36.570 | 309 | 171 | 6 | 5 | 304 | 20 | 312 | 5.44e-67 | 213 |
MS.gene043043.t1 | MTR_4g114210 | 38.585 | 311 | 178 | 6 | 1 | 303 | 15 | 320 | 1.58e-66 | 212 |
MS.gene043043.t1 | MTR_1g038680 | 41.860 | 301 | 168 | 6 | 10 | 303 | 32 | 332 | 1.03e-65 | 210 |
MS.gene043043.t1 | MTR_6g043280 | 39.130 | 299 | 169 | 7 | 11 | 305 | 45 | 334 | 2.60e-65 | 209 |
MS.gene043043.t1 | MTR_1g086320 | 40.000 | 310 | 179 | 5 | 1 | 303 | 24 | 333 | 8.18e-65 | 207 |
MS.gene043043.t1 | MTR_2g008710 | 38.387 | 310 | 179 | 6 | 1 | 303 | 21 | 325 | 1.03e-64 | 207 |
MS.gene043043.t1 | MTR_5g074860 | 39.414 | 307 | 133 | 5 | 3 | 302 | 25 | 285 | 3.06e-64 | 204 |
MS.gene043043.t1 | MTR_8g062780 | 37.338 | 308 | 186 | 4 | 2 | 303 | 18 | 324 | 4.31e-64 | 206 |
MS.gene043043.t1 | MTR_6g043240 | 38.361 | 305 | 171 | 8 | 7 | 306 | 42 | 334 | 1.51e-63 | 205 |
MS.gene043043.t1 | MTR_2g029830 | 40.856 | 257 | 147 | 3 | 53 | 304 | 6 | 262 | 1.61e-63 | 203 |
MS.gene043043.t1 | MTR_5g033470 | 37.942 | 311 | 173 | 7 | 7 | 303 | 73 | 377 | 1.87e-63 | 206 |
MS.gene043043.t1 | MTR_6g027440 | 36.877 | 301 | 183 | 4 | 5 | 303 | 19 | 314 | 3.70e-63 | 203 |
MS.gene043043.t1 | MTR_1g086490 | 39.432 | 317 | 178 | 5 | 1 | 303 | 24 | 340 | 7.44e-63 | 203 |
MS.gene043043.t1 | MTR_4g132490 | 33.987 | 306 | 196 | 3 | 2 | 303 | 24 | 327 | 1.27e-62 | 202 |
MS.gene043043.t1 | MTR_4g031040 | 60.345 | 174 | 26 | 2 | 66 | 239 | 1 | 131 | 3.11e-62 | 194 |
MS.gene043043.t1 | MTR_0286s0010 | 37.097 | 310 | 183 | 7 | 2 | 303 | 29 | 334 | 3.91e-62 | 201 |
MS.gene043043.t1 | MTR_6g008075 | 37.097 | 310 | 183 | 7 | 2 | 303 | 29 | 334 | 3.91e-62 | 201 |
MS.gene043043.t1 | MTR_1g090760 | 36.482 | 307 | 189 | 5 | 3 | 303 | 24 | 330 | 5.45e-62 | 200 |
MS.gene043043.t1 | MTR_6g043460 | 37.209 | 301 | 175 | 7 | 11 | 306 | 40 | 331 | 2.39e-61 | 199 |
MS.gene043043.t1 | MTR_3g092990 | 36.842 | 304 | 177 | 4 | 5 | 304 | 24 | 316 | 2.89e-61 | 198 |
MS.gene043043.t1 | MTR_2g067440 | 36.228 | 334 | 177 | 7 | 5 | 304 | 58 | 389 | 3.47e-60 | 197 |
MS.gene043043.t1 | MTR_4g127670 | 36.877 | 301 | 177 | 6 | 7 | 299 | 24 | 319 | 1.11e-59 | 194 |
MS.gene043043.t1 | MTR_1g009750 | 35.855 | 304 | 175 | 6 | 4 | 303 | 24 | 311 | 3.52e-59 | 192 |
MS.gene043043.t1 | MTR_1g066380 | 34.853 | 307 | 186 | 5 | 5 | 304 | 25 | 324 | 4.02e-59 | 192 |
MS.gene043043.t1 | MTR_1g066640 | 34.202 | 307 | 188 | 5 | 5 | 304 | 25 | 324 | 2.39e-58 | 191 |
MS.gene043043.t1 | MTR_1g066710 | 34.202 | 307 | 188 | 6 | 5 | 304 | 25 | 324 | 5.28e-58 | 190 |
MS.gene043043.t1 | MTR_2g099175 | 34.098 | 305 | 188 | 5 | 7 | 303 | 36 | 335 | 9.70e-58 | 189 |
MS.gene043043.t1 | MTR_4g095450 | 34.314 | 306 | 190 | 5 | 3 | 302 | 23 | 323 | 2.08e-57 | 188 |
MS.gene043043.t1 | MTR_2g077990 | 36.012 | 336 | 178 | 7 | 5 | 304 | 74 | 408 | 3.33e-57 | 190 |
MS.gene043043.t1 | MTR_1g066680 | 34.853 | 307 | 185 | 6 | 5 | 304 | 25 | 323 | 6.45e-57 | 187 |
MS.gene043043.t1 | MTR_2g078280 | 36.076 | 316 | 168 | 5 | 5 | 287 | 74 | 388 | 3.04e-56 | 187 |
MS.gene043043.t1 | MTR_2g078610 | 35.417 | 336 | 180 | 7 | 5 | 304 | 74 | 408 | 2.11e-55 | 186 |
MS.gene043043.t1 | MTR_4g132110 | 32.899 | 307 | 192 | 5 | 7 | 306 | 32 | 331 | 1.77e-54 | 181 |
MS.gene043043.t1 | MTR_2g008160 | 36.246 | 309 | 184 | 8 | 3 | 303 | 20 | 323 | 2.17e-53 | 178 |
MS.gene043043.t1 | MTR_4g132110 | 32.372 | 312 | 192 | 6 | 7 | 306 | 32 | 336 | 3.84e-52 | 175 |
MS.gene043043.t1 | MTR_2g008730 | 34.839 | 310 | 166 | 7 | 1 | 303 | 21 | 301 | 6.88e-49 | 166 |
MS.gene043043.t1 | MTR_2g067450 | 34.727 | 311 | 185 | 7 | 5 | 304 | 9 | 312 | 1.58e-48 | 165 |
MS.gene043043.t1 | MTR_3g105790 | 34.641 | 306 | 189 | 8 | 4 | 303 | 22 | 322 | 1.90e-46 | 160 |
MS.gene043043.t1 | MTR_1g066380 | 34.100 | 261 | 158 | 5 | 51 | 304 | 3 | 256 | 1.92e-45 | 155 |
MS.gene043043.t1 | MTR_0147s0010 | 31.348 | 319 | 182 | 7 | 7 | 302 | 77 | 381 | 8.96e-45 | 157 |
MS.gene043043.t1 | MTR_5g074700 | 40.611 | 229 | 112 | 6 | 80 | 303 | 5 | 214 | 1.48e-42 | 146 |
MS.gene043043.t1 | MTR_3g072210 | 43.005 | 193 | 94 | 5 | 118 | 303 | 55 | 238 | 2.68e-42 | 146 |
MS.gene043043.t1 | MTR_2g008160 | 32.039 | 309 | 162 | 8 | 3 | 303 | 20 | 288 | 3.34e-40 | 142 |
MS.gene043043.t1 | MTR_2g008160 | 41.379 | 174 | 98 | 3 | 3 | 176 | 20 | 189 | 1.74e-39 | 138 |
MS.gene043043.t1 | MTR_3g072260 | 55.963 | 109 | 48 | 0 | 6 | 114 | 25 | 133 | 2.81e-38 | 133 |
MS.gene043043.t1 | MTR_7g072490 | 35.897 | 234 | 90 | 4 | 53 | 286 | 2 | 175 | 1.07e-35 | 128 |
MS.gene043043.t1 | MTR_2g029880 | 37.500 | 200 | 112 | 4 | 119 | 314 | 9 | 199 | 8.50e-35 | 126 |
MS.gene043043.t1 | MTR_3g105790 | 35.345 | 232 | 143 | 6 | 78 | 303 | 16 | 246 | 1.71e-31 | 118 |
MS.gene043043.t1 | MTR_7g086790 | 34.031 | 191 | 105 | 5 | 54 | 244 | 17 | 186 | 1.13e-24 | 99.4 |
MS.gene043043.t1 | MTR_2g077980 | 32.155 | 283 | 138 | 12 | 69 | 304 | 11 | 286 | 1.15e-24 | 101 |
MS.gene043043.t1 | MTR_2g078560 | 30.631 | 222 | 120 | 4 | 112 | 299 | 95 | 316 | 9.26e-22 | 94.0 |
MS.gene043043.t1 | MTR_5g058120 | 34.731 | 167 | 95 | 4 | 143 | 306 | 7 | 162 | 1.63e-21 | 92.0 |
MS.gene043043.t1 | MTR_6g048160 | 54.167 | 72 | 29 | 2 | 45 | 116 | 21 | 88 | 1.61e-18 | 79.3 |
MS.gene043043.t1 | MTR_3g462850 | 37.063 | 143 | 80 | 5 | 171 | 304 | 9 | 150 | 1.72e-18 | 81.3 |
MS.gene043043.t1 | MTR_4g114220 | 47.619 | 84 | 34 | 2 | 33 | 116 | 29 | 102 | 6.17e-18 | 79.3 |
MS.gene043043.t1 | MTR_1g089005 | 36.441 | 118 | 68 | 2 | 7 | 118 | 15 | 131 | 7.40e-17 | 77.0 |
MS.gene043043.t1 | MTR_7g086810 | 32.500 | 120 | 55 | 2 | 5 | 124 | 4 | 97 | 2.31e-16 | 77.4 |
MS.gene043043.t1 | MTR_1g098320 | 44.872 | 78 | 41 | 1 | 228 | 303 | 47 | 124 | 7.92e-14 | 68.2 |
MS.gene043043.t1 | MTR_2g029930 | 37.500 | 96 | 35 | 2 | 1 | 85 | 13 | 94 | 3.48e-13 | 65.5 |
MS.gene043043.t1 | MTR_4g012865 | 39.726 | 73 | 35 | 1 | 7 | 70 | 77 | 149 | 4.85e-13 | 66.2 |
MS.gene043043.t1 | MTR_3g107060 | 30.488 | 164 | 90 | 6 | 22 | 177 | 91 | 238 | 1.12e-12 | 68.2 |
MS.gene043043.t1 | MTR_7g086785 | 28.777 | 139 | 93 | 2 | 53 | 191 | 4 | 136 | 3.83e-12 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043043.t1 | AT2G22420 | 73.633 | 311 | 81 | 1 | 1 | 311 | 17 | 326 | 1.97e-174 | 486 |
MS.gene043043.t1 | AT2G18150 | 46.535 | 303 | 158 | 3 | 5 | 303 | 34 | 336 | 7.07e-95 | 285 |
MS.gene043043.t1 | AT4G36430 | 46.488 | 299 | 156 | 3 | 10 | 304 | 33 | 331 | 1.21e-94 | 284 |
MS.gene043043.t1 | AT5G19890 | 48.355 | 304 | 148 | 4 | 5 | 303 | 28 | 327 | 2.04e-94 | 283 |
MS.gene043043.t1 | AT5G06730 | 43.910 | 312 | 170 | 3 | 2 | 308 | 28 | 339 | 1.37e-93 | 282 |
MS.gene043043.t1 | AT5G06720 | 45.130 | 308 | 164 | 3 | 2 | 304 | 27 | 334 | 9.74e-93 | 279 |
MS.gene043043.t1 | AT5G66390 | 45.118 | 297 | 159 | 3 | 11 | 303 | 37 | 333 | 3.29e-92 | 278 |
MS.gene043043.t1 | AT2G18140 | 47.138 | 297 | 153 | 3 | 11 | 303 | 39 | 335 | 3.47e-91 | 275 |
MS.gene043043.t1 | AT4G16270 | 46.801 | 297 | 154 | 4 | 10 | 303 | 53 | 348 | 2.41e-90 | 273 |
MS.gene043043.t1 | AT2G38390 | 44.660 | 309 | 165 | 4 | 3 | 305 | 27 | 335 | 1.04e-89 | 272 |
MS.gene043043.t1 | AT4G08770 | 43.034 | 323 | 177 | 4 | 2 | 317 | 19 | 341 | 1.98e-88 | 269 |
MS.gene043043.t1 | AT4G08780 | 42.415 | 323 | 179 | 4 | 2 | 317 | 19 | 341 | 2.87e-88 | 268 |
MS.gene043043.t1 | AT2G38380 | 44.337 | 309 | 166 | 4 | 3 | 305 | 27 | 335 | 1.03e-87 | 267 |
MS.gene043043.t1 | AT5G05340 | 43.831 | 308 | 159 | 4 | 2 | 303 | 25 | 324 | 1.57e-87 | 266 |
MS.gene043043.t1 | AT3G50990 | 42.904 | 303 | 169 | 3 | 5 | 303 | 39 | 341 | 1.13e-86 | 264 |
MS.gene043043.t1 | AT3G32980 | 43.574 | 319 | 173 | 4 | 2 | 313 | 26 | 344 | 3.58e-86 | 263 |
MS.gene043043.t1 | AT1G44970 | 44.408 | 304 | 164 | 3 | 5 | 303 | 43 | 346 | 6.37e-86 | 262 |
MS.gene043043.t1 | AT5G19880 | 45.338 | 311 | 162 | 5 | 1 | 303 | 19 | 329 | 1.25e-85 | 261 |
MS.gene043043.t1 | AT1G68850 | 43.464 | 306 | 158 | 5 | 11 | 304 | 34 | 336 | 4.18e-85 | 260 |
MS.gene043043.t1 | AT3G49110 | 43.269 | 312 | 170 | 4 | 5 | 309 | 31 | 342 | 1.64e-84 | 259 |
MS.gene043043.t1 | AT5G58400 | 44.918 | 305 | 155 | 5 | 5 | 303 | 28 | 325 | 4.66e-83 | 254 |
MS.gene043043.t1 | AT3G49120 | 41.587 | 315 | 177 | 4 | 2 | 309 | 27 | 341 | 1.47e-82 | 254 |
MS.gene043043.t1 | AT5G51890 | 43.564 | 303 | 167 | 3 | 3 | 303 | 22 | 322 | 1.17e-81 | 251 |
MS.gene043043.t1 | AT5G58390 | 43.974 | 307 | 159 | 5 | 3 | 303 | 17 | 316 | 7.64e-81 | 248 |
MS.gene043043.t1 | AT1G49570 | 43.377 | 302 | 165 | 4 | 4 | 299 | 45 | 346 | 1.51e-80 | 249 |
MS.gene043043.t1 | AT2G35380 | 45.098 | 306 | 159 | 5 | 7 | 303 | 30 | 335 | 2.53e-80 | 248 |
MS.gene043043.t1 | AT5G42180 | 42.761 | 297 | 166 | 4 | 7 | 302 | 23 | 316 | 5.20e-78 | 241 |
MS.gene043043.t1 | AT1G14540 | 41.639 | 305 | 168 | 4 | 3 | 303 | 17 | 315 | 1.81e-77 | 239 |
MS.gene043043.t1 | AT5G17820 | 39.672 | 305 | 171 | 6 | 2 | 303 | 19 | 313 | 1.41e-76 | 237 |
MS.gene043043.t1 | AT5G17820 | 39.672 | 305 | 171 | 6 | 2 | 303 | 72 | 366 | 1.78e-75 | 236 |
MS.gene043043.t1 | AT1G14550 | 41.368 | 307 | 169 | 5 | 2 | 303 | 21 | 321 | 1.90e-75 | 234 |
MS.gene043043.t1 | AT4G33420 | 42.140 | 299 | 161 | 5 | 7 | 303 | 37 | 325 | 3.53e-74 | 231 |
MS.gene043043.t1 | AT4G33420 | 42.140 | 299 | 161 | 5 | 7 | 303 | 84 | 372 | 1.20e-73 | 232 |
MS.gene043043.t1 | AT3G49960 | 39.414 | 307 | 180 | 4 | 3 | 303 | 23 | 329 | 1.93e-73 | 230 |
MS.gene043043.t1 | AT1G71695 | 40.256 | 313 | 174 | 6 | 7 | 313 | 44 | 349 | 7.25e-73 | 229 |
MS.gene043043.t1 | AT3G03670 | 38.188 | 309 | 179 | 4 | 2 | 303 | 18 | 321 | 9.35e-73 | 228 |
MS.gene043043.t1 | AT5G64120 | 40.468 | 299 | 169 | 6 | 8 | 303 | 36 | 328 | 2.23e-72 | 227 |
MS.gene043043.t1 | AT3G01190 | 43.974 | 307 | 157 | 9 | 4 | 303 | 23 | 321 | 1.73e-71 | 224 |
MS.gene043043.t1 | AT1G05260 | 39.672 | 305 | 177 | 6 | 5 | 304 | 24 | 326 | 2.98e-70 | 221 |
MS.gene043043.t1 | AT4G37520 | 37.377 | 305 | 185 | 4 | 5 | 303 | 25 | 329 | 4.00e-70 | 221 |
MS.gene043043.t1 | AT2G41480 | 40.323 | 310 | 172 | 6 | 2 | 303 | 24 | 328 | 6.38e-70 | 221 |
MS.gene043043.t1 | AT5G15180 | 41.776 | 304 | 164 | 7 | 7 | 303 | 32 | 329 | 6.57e-70 | 221 |
MS.gene043043.t1 | AT4G37530 | 38.312 | 308 | 184 | 4 | 2 | 303 | 22 | 329 | 1.18e-69 | 220 |
MS.gene043043.t1 | AT5G39580 | 40.333 | 300 | 169 | 7 | 8 | 303 | 26 | 319 | 1.95e-69 | 219 |
MS.gene043043.t1 | AT4G11290 | 39.414 | 307 | 179 | 6 | 3 | 303 | 21 | 326 | 5.05e-69 | 218 |
MS.gene043043.t1 | AT5G67400 | 37.785 | 307 | 185 | 4 | 3 | 303 | 23 | 329 | 1.60e-68 | 217 |
MS.gene043043.t1 | AT2G34060 | 40.968 | 310 | 163 | 10 | 6 | 301 | 41 | 344 | 3.57e-68 | 217 |
MS.gene043043.t1 | AT4G37520 | 36.721 | 305 | 184 | 5 | 5 | 303 | 25 | 326 | 3.46e-67 | 214 |
MS.gene043043.t1 | AT3G21770 | 38.636 | 308 | 180 | 6 | 3 | 304 | 25 | 329 | 1.30e-66 | 212 |
MS.gene043043.t1 | AT4G30170 | 37.097 | 310 | 177 | 6 | 4 | 303 | 24 | 325 | 1.87e-66 | 212 |
MS.gene043043.t1 | AT1G05240 | 39.799 | 299 | 171 | 6 | 11 | 303 | 30 | 325 | 2.12e-66 | 211 |
MS.gene043043.t1 | AT1G05250 | 39.799 | 299 | 171 | 6 | 11 | 303 | 30 | 325 | 2.12e-66 | 211 |
MS.gene043043.t1 | AT3G28200 | 37.624 | 303 | 176 | 5 | 7 | 303 | 21 | 316 | 1.22e-64 | 207 |
MS.gene043043.t1 | AT1G30870 | 40.328 | 305 | 168 | 7 | 7 | 305 | 51 | 347 | 2.78e-64 | 207 |
MS.gene043043.t1 | AT1G77100 | 39.172 | 314 | 164 | 9 | 3 | 303 | 20 | 319 | 3.33e-64 | 206 |
MS.gene043043.t1 | AT5G14130 | 35.238 | 315 | 178 | 5 | 3 | 303 | 28 | 330 | 8.40e-64 | 205 |
MS.gene043043.t1 | AT4G17690 | 38.487 | 304 | 175 | 6 | 6 | 303 | 25 | 322 | 1.07e-63 | 204 |
MS.gene043043.t1 | AT5G14130 | 35.238 | 315 | 178 | 5 | 3 | 303 | 69 | 371 | 1.96e-63 | 205 |
MS.gene043043.t1 | AT2G18980 | 35.897 | 312 | 176 | 5 | 5 | 303 | 23 | 323 | 4.25e-63 | 203 |
MS.gene043043.t1 | AT4G26010 | 38.284 | 303 | 170 | 7 | 5 | 303 | 20 | 309 | 1.77e-62 | 201 |
MS.gene043043.t1 | AT4G25980 | 37.097 | 310 | 183 | 6 | 2 | 303 | 21 | 326 | 1.77e-62 | 201 |
MS.gene043043.t1 | AT4G26010 | 38.284 | 303 | 170 | 7 | 5 | 303 | 48 | 337 | 2.32e-62 | 201 |
MS.gene043043.t1 | AT5G47000 | 38.585 | 311 | 177 | 6 | 2 | 303 | 25 | 330 | 2.75e-62 | 201 |
MS.gene043043.t1 | AT1G24110 | 35.082 | 305 | 190 | 5 | 5 | 303 | 20 | 322 | 2.85e-62 | 201 |
MS.gene043043.t1 | AT2G39040 | 37.459 | 307 | 180 | 7 | 7 | 303 | 46 | 350 | 3.23e-62 | 201 |
MS.gene043043.t1 | AT5G40150 | 37.248 | 298 | 177 | 4 | 11 | 303 | 36 | 328 | 4.94e-62 | 200 |
MS.gene043043.t1 | AT4G37530 | 40.310 | 258 | 150 | 3 | 2 | 255 | 22 | 279 | 1.97e-61 | 197 |
MS.gene043043.t1 | AT5G64110 | 38.944 | 303 | 171 | 8 | 8 | 303 | 35 | 330 | 1.56e-60 | 196 |
MS.gene043043.t1 | AT5G64100 | 37.500 | 304 | 168 | 8 | 10 | 303 | 40 | 331 | 3.43e-60 | 196 |
MS.gene043043.t1 | AT4G21960 | 34.084 | 311 | 189 | 6 | 2 | 303 | 24 | 327 | 4.68e-59 | 193 |
MS.gene043043.t1 | AT4G33870 | 33.234 | 334 | 178 | 4 | 7 | 299 | 68 | 397 | 6.49e-58 | 192 |
MS.gene043043.t1 | AT2G24800 | 37.255 | 306 | 180 | 7 | 5 | 303 | 29 | 329 | 8.97e-58 | 189 |
MS.gene043043.t1 | AT1G34510 | 36.893 | 309 | 166 | 9 | 5 | 303 | 20 | 309 | 2.81e-57 | 187 |
MS.gene043043.t1 | AT5G22410 | 37.748 | 302 | 173 | 7 | 7 | 300 | 28 | 322 | 8.34e-57 | 187 |
MS.gene043043.t1 | AT2G37130 | 33.548 | 310 | 191 | 7 | 2 | 303 | 25 | 327 | 8.70e-57 | 187 |
MS.gene043043.t1 | AT3G17070 | 35.082 | 305 | 187 | 4 | 7 | 303 | 38 | 339 | 1.15e-56 | 187 |
MS.gene043043.t1 | AT2G37130 | 34.219 | 301 | 183 | 7 | 11 | 303 | 3 | 296 | 5.18e-56 | 184 |
MS.gene043043.t1 | AT2G35380 | 43.320 | 247 | 131 | 5 | 66 | 303 | 1 | 247 | 1.03e-55 | 181 |
MS.gene043043.t1 | AT2G43480 | 35.179 | 307 | 183 | 6 | 7 | 303 | 35 | 335 | 1.66e-54 | 181 |
MS.gene043043.t1 | AT4G31760 | 34.405 | 311 | 189 | 8 | 1 | 303 | 23 | 326 | 6.59e-52 | 174 |
MS.gene043043.t1 | AT5G24070 | 33.553 | 304 | 186 | 6 | 11 | 304 | 39 | 336 | 1.46e-51 | 174 |
MS.gene043043.t1 | AT3G17070 | 33.582 | 268 | 166 | 5 | 44 | 303 | 13 | 276 | 2.47e-42 | 148 |
MS.gene043043.t1 | AT5G39580 | 42.373 | 177 | 97 | 3 | 8 | 184 | 26 | 197 | 2.17e-41 | 144 |
MS.gene043043.t1 | AT4G25980 | 42.775 | 173 | 95 | 3 | 2 | 174 | 66 | 234 | 1.01e-39 | 141 |
MS.gene043043.t1 | AT2G24800 | 41.026 | 195 | 103 | 6 | 5 | 192 | 29 | 218 | 2.82e-35 | 128 |
MS.gene043043.t1 | AT1G77490 | 26.515 | 264 | 147 | 8 | 41 | 287 | 106 | 339 | 2.52e-18 | 85.5 |
MS.gene043043.t1 | AT1G77490 | 26.515 | 264 | 147 | 8 | 41 | 287 | 106 | 339 | 3.84e-18 | 85.1 |
MS.gene043043.t1 | AT4G08390 | 29.384 | 211 | 118 | 7 | 88 | 290 | 175 | 362 | 8.96e-15 | 74.7 |
MS.gene043043.t1 | AT4G08390 | 29.384 | 211 | 118 | 7 | 88 | 290 | 176 | 363 | 9.00e-15 | 74.7 |
MS.gene043043.t1 | AT4G08390 | 29.384 | 211 | 118 | 7 | 88 | 290 | 176 | 363 | 9.00e-15 | 74.7 |
MS.gene043043.t1 | AT4G08390 | 29.384 | 211 | 118 | 7 | 88 | 290 | 176 | 363 | 9.00e-15 | 74.7 |
MS.gene043043.t1 | AT3G42570 | 35.789 | 95 | 60 | 1 | 79 | 172 | 53 | 147 | 1.64e-14 | 70.5 |
Find 54 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAACTGATGCAACACTTCT+TGG | 0.239498 | 4.2:-73936276 | None:intergenic |
TGTTGAAGGAATGTTGAAAT+TGG | 0.241814 | 4.2:+73938100 | MS.gene043043:CDS |
CAACCAAGTCCTTGAAATAT+TGG | 0.258540 | 4.2:-73937971 | None:intergenic |
CCTAACCTCACTTCCCAATT+AGG | 0.274883 | 4.2:-73937627 | None:intergenic |
TACAGACAGGAGGACCTAAT+TGG | 0.284229 | 4.2:+73937613 | MS.gene043043:intron |
AACTATGCTTGGAGAGAAAT+TGG | 0.290246 | 4.2:+73936657 | MS.gene043043:CDS |
CTAAATACTGGATCAATTGC+AGG | 0.334629 | 4.2:-73937864 | None:intergenic |
CTCACAAACCCCTTTGTTTG+AGG | 0.337581 | 4.2:-73938038 | None:intergenic |
GGAAGTGAGGTTAGGAAGAT+TGG | 0.339310 | 4.2:+73937635 | MS.gene043043:CDS |
TCAAGTTCTGCTCTAAATAC+TGG | 0.343444 | 4.2:-73937876 | None:intergenic |
AGAGCAGTGGCATTAGTTCT+TGG | 0.351721 | 4.2:-73937705 | None:intergenic |
CTGATAAGCCTGGTGAAGTT+AGG | 0.388834 | 4.2:+73938135 | MS.gene043043:CDS |
TTGTGCTGATATCATAATCA+TGG | 0.414358 | 4.2:+73936768 | MS.gene043043:CDS |
TGAAGTTGTTGATGAGGTTA+AGG | 0.414573 | 4.2:+73936711 | MS.gene043043:CDS |
TTCTAGAGATGCTGTAGCAT+TGG | 0.419995 | 4.2:+73936792 | MS.gene043043:CDS |
GTTGAAGGAATGTTGAAATT+GGG | 0.420650 | 4.2:+73938101 | MS.gene043043:CDS |
CTGACAATTGTTTCAGCTTG+TGG | 0.421262 | 4.2:-73936222 | None:intergenic |
AAGGACTTGGTTGGTGGAAG+AGG | 0.432566 | 4.2:+73937981 | MS.gene043043:CDS |
TTTCGATAACCAATATTTCA+AGG | 0.438590 | 4.2:+73937962 | MS.gene043043:CDS |
GTGGCATTAGTTCTTGGACT+TGG | 0.462901 | 4.2:-73937699 | None:intergenic |
TAACCAATATTTCAAGGACT+TGG | 0.464692 | 4.2:+73937968 | MS.gene043043:CDS |
AGGGTCAGGCTTTCCGCTAC+CGG | 0.465665 | 4.2:-73937844 | None:intergenic |
CAATTCTTCCTAACTTCACC+AGG | 0.473399 | 4.2:-73938143 | None:intergenic |
ACAGACAGGAGGACCTAATT+GGG | 0.473432 | 4.2:+73937614 | MS.gene043043:intron |
AAAGACCTTGTAGCACTCTC+AGG | 0.475027 | 4.2:+73937762 | MS.gene043043:CDS |
TCTTTATCTTATCTTCAGAC+AGG | 0.492343 | 4.2:-73938199 | None:intergenic |
ACTGGATCAATTGCAGGGTC+AGG | 0.499134 | 4.2:-73937858 | None:intergenic |
GCTGTAGAGAAGGCTTGTCC+TGG | 0.500960 | 4.2:+73936736 | MS.gene043043:CDS |
CCTAATTGGGAAGTGAGGTT+AGG | 0.501427 | 4.2:+73937627 | MS.gene043043:CDS |
CAATATTTCAAGGACTTGGT+TGG | 0.502030 | 4.2:+73937972 | MS.gene043043:CDS |
AATTTCTCTCCAAGCATAGT+TGG | 0.513582 | 4.2:-73936655 | None:intergenic |
ATCATTTGAAGTTGTTGATG+AGG | 0.515377 | 4.2:+73936705 | MS.gene043043:CDS |
GATGTTGATCAAAATAAGAC+AGG | 0.536838 | 4.2:+73937915 | MS.gene043043:CDS |
TATTTCAAGGACTTGGTTGG+TGG | 0.538804 | 4.2:+73937975 | MS.gene043043:CDS |
TAATTTGTGAAGGGGTGTGA+TGG | 0.542064 | 4.2:+73936610 | MS.gene043043:intron |
AAATCACAGGAGTTGCATCA+AGG | 0.548807 | 4.2:-73937941 | None:intergenic |
GATGATACACCAACTATGCT+TGG | 0.551588 | 4.2:+73936646 | MS.gene043043:CDS |
TCTTCAGACAGGATATGAGC+AGG | 0.564714 | 4.2:-73938188 | None:intergenic |
TTTCGGCTATACAATCAATC+CGG | 0.568350 | 4.2:+73937825 | MS.gene043043:CDS |
GACTTGCAGTCTGATAAGCC+TGG | 0.576693 | 4.2:+73938125 | MS.gene043043:CDS |
TCAGCACAAGAAACAACTCC+AGG | 0.586737 | 4.2:-73936754 | None:intergenic |
CTCTCAGGATCACACTCTAT+CGG | 0.590516 | 4.2:+73937777 | MS.gene043043:CDS |
TATTGGTTATCGAAAATCAC+AGG | 0.593232 | 4.2:-73937954 | None:intergenic |
CTATACAATCAATCCGGTAG+CGG | 0.596485 | 4.2:+73937831 | MS.gene043043:CDS |
GGTTAAGGATGCTGTAGAGA+AGG | 0.596715 | 4.2:+73936726 | MS.gene043043:CDS |
GTGATCCTGAGAGTGCTACA+AGG | 0.617824 | 4.2:-73937767 | None:intergenic |
GAAGAGATTAATGAGAGCAG+TGG | 0.625249 | 4.2:-73937718 | None:intergenic |
CATCCGCGGATCTTCGACAA+GGG | 0.635365 | 4.2:+73936181 | MS.gene043043:CDS |
TAAATACTGGATCAATTGCA+GGG | 0.638216 | 4.2:-73937863 | None:intergenic |
CATAATCATGGTAACATCCG+CGG | 0.652727 | 4.2:+73936167 | None:intergenic |
GAGGACCTAATTGGGAAGTG+AGG | 0.676683 | 4.2:+73937622 | MS.gene043043:CDS |
ACATCCGCGGATCTTCGACA+AGG | 0.679506 | 4.2:+73936180 | MS.gene043043:CDS |
ATACCCTTGTCGAAGATCCG+CGG | 0.687151 | 4.2:-73936184 | None:intergenic |
CTACAAGGTCTTTAACACTG+AGG | 0.746017 | 4.2:-73937752 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTTAAAAAAATAATAATA+GGG | - | chr4.2:73936517-73936536 | None:intergenic | 0.0% |
!! | TTATTTAAAAAAATAATAAT+AGG | - | chr4.2:73936518-73936537 | None:intergenic | 0.0% |
!!! | TGATAAAATAAATCTATTTT+AGG | + | chr4.2:73937071-73937090 | MS.gene043043:intron | 10.0% |
!!! | TATGTATATCTTTTTTTTGA+GGG | + | chr4.2:73936397-73936416 | MS.gene043043:intron | 15.0% |
!!! | TTATGTATATCTTTTTTTTG+AGG | + | chr4.2:73936396-73936415 | MS.gene043043:intron | 15.0% |
!! | ATAAATAAATATGACTCTTC+CGG | + | chr4.2:73936939-73936958 | MS.gene043043:intron | 20.0% |
!! | CAAATTTATATGGACAATAT+TGG | - | chr4.2:73937221-73937240 | None:intergenic | 20.0% |
!! | GATAATGTGTCAAATTTATA+TGG | - | chr4.2:73937231-73937250 | None:intergenic | 20.0% |
!!! | AATACCAATTATTGATTTTC+CGG | - | chr4.2:73936961-73936980 | None:intergenic | 20.0% |
!!! | TTGAAAAGATAGAATTTTGA+TGG | - | chr4.2:73936359-73936378 | None:intergenic | 20.0% |
!!! | TTTTAATTTTCATTACAGAC+AGG | + | chr4.2:73937600-73937619 | MS.gene043043:intron | 20.0% |
! | ACAATGCATTATTATATGCA+GGG | - | chr4.2:73937523-73937542 | None:intergenic | 25.0% |
! | ATATGGACAATATTGGAAAA+GGG | - | chr4.2:73937214-73937233 | None:intergenic | 25.0% |
! | ATGAGTAAATTTGAATATGC+AGG | - | chr4.2:73937573-73937592 | None:intergenic | 25.0% |
! | TATATGGACAATATTGGAAA+AGG | - | chr4.2:73937215-73937234 | None:intergenic | 25.0% |
! | TGGATATAATTCACCTTATA+AGG | + | chr4.2:73937462-73937481 | MS.gene043043:intron | 25.0% |
! | TTAAATACGCAGTATCAATA+AGG | - | chr4.2:73937417-73937436 | None:intergenic | 25.0% |
! | TTTCGATAACCAATATTTCA+AGG | + | chr4.2:73937962-73937981 | MS.gene043043:CDS | 25.0% |
!!! | ATGAGTTGTTTAATTTGTGA+AGG | + | chr4.2:73936600-73936619 | MS.gene043043:intron | 25.0% |
!!! | GTTGTTTTTCAATCATGTTT+CGG | + | chr4.2:73937808-73937827 | MS.gene043043:CDS | 25.0% |
!!! | TGAGTTGTTTAATTTGTGAA+GGG | + | chr4.2:73936601-73936620 | MS.gene043043:intron | 25.0% |
!!! | TTTTTCAAAGCATTTGTTGA+AGG | + | chr4.2:73938086-73938105 | MS.gene043043:CDS | 25.0% |
ACCTTATAAGGTGAATAAGT+GGG | + | chr4.2:73937474-73937493 | MS.gene043043:intron | 30.0% | |
CAATGCATTATTATATGCAG+GGG | - | chr4.2:73937522-73937541 | None:intergenic | 30.0% | |
GACAATGCATTATTATATGC+AGG | - | chr4.2:73937524-73937543 | None:intergenic | 30.0% | |
GATGTTGATCAAAATAAGAC+AGG | + | chr4.2:73937915-73937934 | MS.gene043043:CDS | 30.0% | |
GTTGAAGGAATGTTGAAATT+GGG | + | chr4.2:73938101-73938120 | MS.gene043043:CDS | 30.0% | |
TAAATACTGGATCAATTGCA+GGG | - | chr4.2:73937866-73937885 | None:intergenic | 30.0% | |
TAACCAATATTTCAAGGACT+TGG | + | chr4.2:73937968-73937987 | MS.gene043043:CDS | 30.0% | |
TAAGGTGAATTATATCCACT+AGG | - | chr4.2:73937460-73937479 | None:intergenic | 30.0% | |
TCTTCCGGAAAATCAATAAT+TGG | + | chr4.2:73936954-73936973 | MS.gene043043:intron | 30.0% | |
TCTTTATCTTATCTTCAGAC+AGG | - | chr4.2:73938202-73938221 | None:intergenic | 30.0% | |
TGTTGAAGGAATGTTGAAAT+TGG | + | chr4.2:73938100-73938119 | MS.gene043043:CDS | 30.0% | |
! | ATCATTTGAAGTTGTTGATG+AGG | + | chr4.2:73936705-73936724 | MS.gene043043:CDS | 30.0% |
! | CGATCTCATTAATTTGAGAT+CGG | - | chr4.2:73937375-73937394 | None:intergenic | 30.0% |
! | TAACACTGAGGTTGTATTTT+TGG | - | chr4.2:73937743-73937762 | None:intergenic | 30.0% |
! | TAATTTTCATTACAGACAGG+AGG | + | chr4.2:73937603-73937622 | MS.gene043043:intron | 30.0% |
! | TATTGGTTATCGAAAATCAC+AGG | - | chr4.2:73937957-73937976 | None:intergenic | 30.0% |
! | TTGTGCTGATATCATAATCA+TGG | + | chr4.2:73936768-73936787 | MS.gene043043:CDS | 30.0% |
!! | GAGTTGTTTAATTTGTGAAG+GGG | + | chr4.2:73936602-73936621 | MS.gene043043:intron | 30.0% |
!! | TTCACTTTTCCTCAAACAAA+GGG | + | chr4.2:73938029-73938048 | MS.gene043043:CDS | 30.0% |
!! | TTTCACTTTTCCTCAAACAA+AGG | + | chr4.2:73938028-73938047 | MS.gene043043:CDS | 30.0% |
!!! | GACGGTAAATATTTTAGCAT+TGG | - | chr4.2:73937132-73937151 | None:intergenic | 30.0% |
!!! | TTATTTTGATCAACATCTCG+TGG | - | chr4.2:73937912-73937931 | None:intergenic | 30.0% |
AACTATGCTTGGAGAGAAAT+TGG | + | chr4.2:73936657-73936676 | MS.gene043043:CDS | 35.0% | |
AATTTCTCTCCAAGCATAGT+TGG | - | chr4.2:73936658-73936677 | None:intergenic | 35.0% | |
ATAACTGATGCAACACTTCT+TGG | - | chr4.2:73936279-73936298 | None:intergenic | 35.0% | |
CAACCAAGTCCTTGAAATAT+TGG | - | chr4.2:73937974-73937993 | None:intergenic | 35.0% | |
CACCTTATAAGGTGAATAAG+TGG | + | chr4.2:73937473-73937492 | MS.gene043043:intron | 35.0% | |
CCTTATAAGGTGAATAAGTG+GGG | + | chr4.2:73937475-73937494 | MS.gene043043:intron | 35.0% | |
CTAAATACTGGATCAATTGC+AGG | - | chr4.2:73937867-73937886 | None:intergenic | 35.0% | |
GAGCACAAATTAGATCAAGA+CGG | - | chr4.2:73937150-73937169 | None:intergenic | 35.0% | |
TGGAGAAACACACAAAAGAT+TGG | - | chr4.2:73937112-73937131 | None:intergenic | 35.0% | |
TTTCGGCTATACAATCAATC+CGG | + | chr4.2:73937825-73937844 | MS.gene043043:CDS | 35.0% | |
! | CAATATTTCAAGGACTTGGT+TGG | + | chr4.2:73937972-73937991 | MS.gene043043:CDS | 35.0% |
! | TCAAGTTCTGCTCTAAATAC+TGG | - | chr4.2:73937879-73937898 | None:intergenic | 35.0% |
! | TGAAGTTGTTGATGAGGTTA+AGG | + | chr4.2:73936711-73936730 | MS.gene043043:CDS | 35.0% |
!! | TCACTTTTCCTCAAACAAAG+GGG | + | chr4.2:73938030-73938049 | MS.gene043043:CDS | 35.0% |
!!! | TTTTTTGTCAAGTAGCCTAG+TGG | + | chr4.2:73937442-73937461 | MS.gene043043:intron | 35.0% |
AAATCACAGGAGTTGCATCA+AGG | - | chr4.2:73937944-73937963 | None:intergenic | 40.0% | |
ACGCAGTATCAATAAGGATC+CGG | - | chr4.2:73937411-73937430 | None:intergenic | 40.0% | |
CAATTCTTCCTAACTTCACC+AGG | - | chr4.2:73938146-73938165 | None:intergenic | 40.0% | |
CCCCACTTATTCACCTTATA+AGG | - | chr4.2:73937478-73937497 | None:intergenic | 40.0% | |
CTACAAGGTCTTTAACACTG+AGG | - | chr4.2:73937755-73937774 | None:intergenic | 40.0% | |
CTATACAATCAATCCGGTAG+CGG | + | chr4.2:73937831-73937850 | MS.gene043043:CDS | 40.0% | |
CTGACAATTGTTTCAGCTTG+TGG | - | chr4.2:73936225-73936244 | None:intergenic | 40.0% | |
GAAGAGATTAATGAGAGCAG+TGG | - | chr4.2:73937721-73937740 | None:intergenic | 40.0% | |
GATGATACACCAACTATGCT+TGG | + | chr4.2:73936646-73936665 | MS.gene043043:CDS | 40.0% | |
TACCAACTGAGTTATGCACA+CGG | + | chr4.2:73937545-73937564 | MS.gene043043:intron | 40.0% | |
! | TAATTTGTGAAGGGGTGTGA+TGG | + | chr4.2:73936610-73936629 | MS.gene043043:intron | 40.0% |
! | TATTTCAAGGACTTGGTTGG+TGG | + | chr4.2:73937975-73937994 | MS.gene043043:CDS | 40.0% |
! | TTCTAGAGATGCTGTAGCAT+TGG | + | chr4.2:73936792-73936811 | MS.gene043043:CDS | 40.0% |
AAAGACCTTGTAGCACTCTC+AGG | + | chr4.2:73937762-73937781 | MS.gene043043:CDS | 45.0% | |
ACAGACAGGAGGACCTAATT+GGG | + | chr4.2:73937614-73937633 | MS.gene043043:intron | 45.0% | |
AGATCGTTTACTATGCAGCC+CGG | + | chr4.2:73937389-73937408 | MS.gene043043:intron | 45.0% | |
ATTATTATATGCAGGGGCCG+GGG | - | chr4.2:73937516-73937535 | None:intergenic | 45.0% | |
CATTATTATATGCAGGGGCC+GGG | - | chr4.2:73937517-73937536 | None:intergenic | 45.0% | |
CCTAACCTCACTTCCCAATT+AGG | - | chr4.2:73937630-73937649 | None:intergenic | 45.0% | |
CCTAATTGGGAAGTGAGGTT+AGG | + | chr4.2:73937627-73937646 | MS.gene043043:CDS | 45.0% | |
CGCAGTATCAATAAGGATCC+GGG | - | chr4.2:73937410-73937429 | None:intergenic | 45.0% | |
CTCTCAGGATCACACTCTAT+CGG | + | chr4.2:73937777-73937796 | MS.gene043043:CDS | 45.0% | |
CTGATAAGCCTGGTGAAGTT+AGG | + | chr4.2:73938135-73938154 | MS.gene043043:CDS | 45.0% | |
GCATTATTATATGCAGGGGC+CGG | - | chr4.2:73937518-73937537 | None:intergenic | 45.0% | |
GGAAGTGAGGTTAGGAAGAT+TGG | + | chr4.2:73937635-73937654 | MS.gene043043:CDS | 45.0% | |
GGTTAAGGATGCTGTAGAGA+AGG | + | chr4.2:73936726-73936745 | MS.gene043043:CDS | 45.0% | |
GTGTGCATAACTCAGTTGGT+AGG | - | chr4.2:73937546-73937565 | None:intergenic | 45.0% | |
TACAGACAGGAGGACCTAAT+TGG | + | chr4.2:73937613-73937632 | MS.gene043043:intron | 45.0% | |
TCAGCACAAGAAACAACTCC+AGG | - | chr4.2:73936757-73936776 | None:intergenic | 45.0% | |
TCTTCAGACAGGATATGAGC+AGG | - | chr4.2:73938191-73938210 | None:intergenic | 45.0% | |
! | AGAGCAGTGGCATTAGTTCT+TGG | - | chr4.2:73937708-73937727 | None:intergenic | 45.0% |
! | CTCACAAACCCCTTTGTTTG+AGG | - | chr4.2:73938041-73938060 | None:intergenic | 45.0% |
! | GTGGCATTAGTTCTTGGACT+TGG | - | chr4.2:73937702-73937721 | None:intergenic | 45.0% |
!!! | TTTTTAAATAAAATAATGAA+AGG | + | chr4.2:73936527-73936546 | MS.gene043043:intron | 5.0% |
ACTGGATCAATTGCAGGGTC+AGG | - | chr4.2:73937861-73937880 | None:intergenic | 50.0% | |
ATACCCTTGTCGAAGATCCG+CGG | - | chr4.2:73936187-73936206 | None:intergenic | 50.0% | |
GACTTGCAGTCTGATAAGCC+TGG | + | chr4.2:73938125-73938144 | MS.gene043043:CDS | 50.0% | |
GAGGACCTAATTGGGAAGTG+AGG | + | chr4.2:73937622-73937641 | MS.gene043043:CDS | 50.0% | |
TGCCGTGTGCATAACTCAGT+TGG | - | chr4.2:73937550-73937569 | None:intergenic | 50.0% | |
! | AGGTGAATAAGTGGGGTGTC+CGG | + | chr4.2:73937482-73937501 | MS.gene043043:intron | 50.0% |
!! | AAGGACTTGGTTGGTGGAAG+AGG | + | chr4.2:73937981-73938000 | MS.gene043043:CDS | 50.0% |
!! | GTGATCCTGAGAGTGCTACA+AGG | - | chr4.2:73937770-73937789 | None:intergenic | 50.0% |
ACATCCGCGGATCTTCGACA+AGG | + | chr4.2:73936180-73936199 | MS.gene043043:CDS | 55.0% | |
CATCCGCGGATCTTCGACAA+GGG | + | chr4.2:73936181-73936200 | MS.gene043043:CDS | 55.0% | |
GCTGTAGAGAAGGCTTGTCC+TGG | + | chr4.2:73936736-73936755 | MS.gene043043:CDS | 55.0% | |
! | GGTGAATAAGTGGGGTGTCC+GGG | + | chr4.2:73937483-73937502 | MS.gene043043:intron | 55.0% |
! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr4.2:73937484-73937503 | MS.gene043043:intron | 55.0% |
AGGGTCAGGCTTTCCGCTAC+CGG | - | chr4.2:73937847-73937866 | None:intergenic | 60.0% | |
GGTGTCCGGGGTTCGAACCC+CGG | + | chr4.2:73937496-73937515 | MS.gene043043:intron | 70.0% | |
AGGGGCCGGGGTTCGAACCC+CGG | - | chr4.2:73937504-73937523 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 73936174 | 73938241 | 73936174 | ID=MS.gene043043 |
chr4.2 | mRNA | 73936174 | 73938241 | 73936174 | ID=MS.gene043043.t1;Parent=MS.gene043043 |
chr4.2 | exon | 73936174 | 73936329 | 73936174 | ID=MS.gene043043.t1.exon1;Parent=MS.gene043043.t1 |
chr4.2 | CDS | 73936174 | 73936329 | 73936174 | ID=cds.MS.gene043043.t1;Parent=MS.gene043043.t1 |
chr4.2 | exon | 73936622 | 73936813 | 73936622 | ID=MS.gene043043.t1.exon2;Parent=MS.gene043043.t1 |
chr4.2 | CDS | 73936622 | 73936813 | 73936622 | ID=cds.MS.gene043043.t1;Parent=MS.gene043043.t1 |
chr4.2 | exon | 73937618 | 73938241 | 73937618 | ID=MS.gene043043.t1.exon3;Parent=MS.gene043043.t1 |
chr4.2 | CDS | 73937618 | 73938241 | 73937618 | ID=cds.MS.gene043043.t1;Parent=MS.gene043043.t1 |
Gene Sequence |
Protein sequence |