Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014836.t1 | XP_003603389.1 | 96.6 | 207 | 7 | 0 | 1 | 207 | 82 | 288 | 5.70E-111 | 410.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014836.t1 | Q8GY91 | 74.5 | 200 | 51 | 0 | 8 | 207 | 98 | 297 | 1.4e-86 | 320.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014836.t1 | G7JB12 | 96.6 | 207 | 7 | 0 | 1 | 207 | 82 | 288 | 4.1e-111 | 410.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene014836 | MS.gene32715 | PPI |
MS.gene014836 | MS.gene48740 | PPI |
MS.gene014836 | MS.gene043043 | PPI |
MS.gene014836 | MS.gene44482 | PPI |
MS.gene014836 | MS.gene35931 | PPI |
MS.gene014836 | MS.gene80170 | PPI |
MS.gene014836 | MS.gene88144 | PPI |
MS.gene48733 | MS.gene014836 | PPI |
MS.gene014836 | MS.gene48746 | PPI |
MS.gene014836 | MS.gene043054 | PPI |
MS.gene014836 | MS.gene88044 | PPI |
MS.gene014836 | MS.gene014924 | PPI |
MS.gene014836 | MS.gene35853 | PPI |
MS.gene014836 | MS.gene015231 | PPI |
MS.gene014836 | MS.gene067613 | PPI |
MS.gene014836 | MS.gene029047 | PPI |
MS.gene014836 | MS.gene57204 | PPI |
MS.gene014836 | MS.gene45786 | PPI |
MS.gene014836 | MS.gene20276 | PPI |
MS.gene014836 | MS.gene09575 | PPI |
MS.gene014836 | MS.gene35795 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014836.t1 | MTR_3g107060 | 96.154 | 208 | 8 | 0 | 1 | 208 | 82 | 289 | 4.80e-149 | 417 |
MS.gene014836.t1 | MTR_4g073410 | 37.963 | 216 | 110 | 7 | 6 | 207 | 13 | 218 | 7.38e-36 | 127 |
MS.gene014836.t1 | MTR_5g022510 | 38.073 | 218 | 110 | 7 | 6 | 209 | 12 | 218 | 4.16e-35 | 125 |
MS.gene014836.t1 | MTR_4g061140 | 39.706 | 204 | 100 | 7 | 12 | 201 | 20 | 214 | 5.13e-33 | 119 |
MS.gene014836.t1 | MTR_4g061140 | 39.706 | 204 | 100 | 7 | 12 | 201 | 20 | 214 | 5.14e-33 | 119 |
MS.gene014836.t1 | MTR_5g022510 | 38.220 | 191 | 94 | 6 | 32 | 209 | 14 | 193 | 1.68e-30 | 113 |
MS.gene014836.t1 | MTR_4g061140 | 39.891 | 183 | 88 | 6 | 32 | 201 | 7 | 180 | 1.92e-29 | 109 |
MS.gene014836.t1 | MTR_3g088160 | 35.849 | 212 | 90 | 8 | 27 | 201 | 121 | 323 | 4.61e-25 | 101 |
MS.gene014836.t1 | MTR_3g088160 | 35.849 | 212 | 90 | 8 | 27 | 201 | 121 | 323 | 5.21e-25 | 101 |
MS.gene014836.t1 | MTR_4g029200 | 32.701 | 211 | 112 | 7 | 6 | 194 | 57 | 259 | 1.40e-20 | 88.2 |
MS.gene014836.t1 | MTR_7g029030 | 30.570 | 193 | 119 | 7 | 11 | 195 | 45 | 230 | 5.90e-19 | 83.6 |
MS.gene014836.t1 | MTR_3g094650 | 28.700 | 223 | 100 | 8 | 10 | 178 | 43 | 260 | 5.97e-19 | 83.6 |
MS.gene014836.t1 | MTR_4g029190 | 29.767 | 215 | 89 | 6 | 10 | 178 | 80 | 278 | 1.79e-18 | 82.4 |
MS.gene014836.t1 | MTR_4g074980 | 33.750 | 160 | 88 | 5 | 11 | 157 | 41 | 195 | 8.60e-18 | 79.3 |
MS.gene014836.t1 | MTR_4g074990 | 29.646 | 226 | 94 | 8 | 11 | 178 | 40 | 258 | 1.10e-17 | 79.7 |
MS.gene014836.t1 | MTR_4g083710 | 29.018 | 224 | 98 | 7 | 11 | 178 | 43 | 261 | 1.32e-17 | 79.7 |
MS.gene014836.t1 | MTR_3g092990 | 31.925 | 213 | 113 | 8 | 9 | 195 | 40 | 246 | 1.38e-17 | 79.7 |
MS.gene014836.t1 | MTR_1g025980 | 35.329 | 167 | 93 | 6 | 25 | 183 | 56 | 215 | 1.62e-17 | 79.7 |
MS.gene014836.t1 | MTR_4g074980 | 33.750 | 160 | 88 | 5 | 11 | 157 | 41 | 195 | 1.88e-17 | 79.0 |
MS.gene014836.t1 | MTR_7g072510 | 37.762 | 143 | 75 | 4 | 25 | 157 | 52 | 190 | 2.37e-17 | 79.0 |
MS.gene014836.t1 | MTR_7g072480 | 36.478 | 159 | 85 | 5 | 11 | 157 | 40 | 194 | 2.72e-17 | 79.0 |
MS.gene014836.t1 | MTR_4g095450 | 35.461 | 141 | 82 | 4 | 26 | 157 | 60 | 200 | 2.79e-17 | 79.0 |
MS.gene014836.t1 | MTR_0155s0040 | 34.568 | 162 | 84 | 6 | 10 | 157 | 42 | 195 | 6.57e-17 | 77.8 |
MS.gene014836.t1 | MTR_5g016010 | 31.844 | 179 | 94 | 7 | 11 | 173 | 47 | 213 | 1.10e-16 | 77.4 |
MS.gene014836.t1 | MTR_1g077000 | 35.976 | 164 | 80 | 7 | 24 | 174 | 70 | 221 | 2.34e-16 | 76.3 |
MS.gene014836.t1 | MTR_5g022870 | 35.948 | 153 | 83 | 6 | 25 | 169 | 55 | 200 | 6.50e-16 | 75.1 |
MS.gene014836.t1 | MTR_2g084000 | 31.677 | 161 | 92 | 5 | 10 | 157 | 41 | 196 | 7.58e-16 | 75.1 |
MS.gene014836.t1 | MTR_5g083860 | 27.876 | 226 | 104 | 7 | 6 | 177 | 42 | 262 | 1.07e-15 | 74.7 |
MS.gene014836.t1 | MTR_8g075100 | 34.395 | 157 | 88 | 6 | 25 | 173 | 58 | 207 | 2.25e-15 | 73.6 |
MS.gene014836.t1 | MTR_8g062780 | 32.778 | 180 | 95 | 7 | 10 | 173 | 38 | 207 | 2.50e-15 | 73.6 |
MS.gene014836.t1 | MTR_3g466200 | 29.469 | 207 | 88 | 8 | 25 | 178 | 57 | 258 | 2.61e-15 | 73.6 |
MS.gene014836.t1 | MTR_2g084010 | 30.675 | 163 | 91 | 6 | 10 | 157 | 40 | 195 | 2.98e-15 | 73.2 |
MS.gene014836.t1 | MTR_3g072190 | 33.544 | 158 | 83 | 5 | 11 | 157 | 50 | 196 | 3.07e-15 | 73.2 |
MS.gene014836.t1 | MTR_6g043240 | 31.928 | 166 | 94 | 6 | 10 | 163 | 57 | 215 | 4.73e-15 | 72.8 |
MS.gene014836.t1 | MTR_2g008160 | 33.333 | 150 | 84 | 5 | 18 | 158 | 49 | 191 | 5.43e-15 | 72.4 |
MS.gene014836.t1 | MTR_1g086320 | 31.937 | 191 | 103 | 7 | 10 | 183 | 45 | 225 | 8.76e-15 | 72.0 |
MS.gene014836.t1 | MTR_1g115900 | 35.211 | 142 | 79 | 4 | 25 | 157 | 59 | 196 | 1.40e-14 | 71.6 |
MS.gene014836.t1 | MTR_2g084080 | 29.703 | 202 | 87 | 7 | 25 | 176 | 57 | 253 | 2.32e-14 | 70.9 |
MS.gene014836.t1 | MTR_2g084110 | 27.854 | 219 | 101 | 9 | 10 | 176 | 40 | 253 | 2.49e-14 | 70.5 |
MS.gene014836.t1 | MTR_6g043460 | 33.918 | 171 | 95 | 6 | 10 | 168 | 51 | 215 | 3.96e-14 | 70.5 |
MS.gene014836.t1 | MTR_2g084020 | 30.061 | 163 | 92 | 6 | 10 | 157 | 40 | 195 | 4.48e-14 | 70.1 |
MS.gene014836.t1 | MTR_7g026990 | 32.500 | 160 | 89 | 6 | 25 | 173 | 63 | 214 | 6.20e-14 | 69.7 |
MS.gene014836.t1 | MTR_0286s0010 | 30.380 | 158 | 100 | 4 | 10 | 157 | 49 | 206 | 9.95e-14 | 68.9 |
MS.gene014836.t1 | MTR_6g008075 | 30.380 | 158 | 100 | 4 | 10 | 157 | 49 | 206 | 9.95e-14 | 68.9 |
MS.gene014836.t1 | MTR_5g074860 | 31.928 | 166 | 85 | 7 | 25 | 173 | 61 | 215 | 1.23e-13 | 68.9 |
MS.gene014836.t1 | MTR_4g031140 | 31.902 | 163 | 87 | 6 | 11 | 157 | 44 | 198 | 1.74e-13 | 68.6 |
MS.gene014836.t1 | MTR_3g467600 | 29.048 | 210 | 85 | 7 | 25 | 178 | 59 | 260 | 1.96e-13 | 68.2 |
MS.gene014836.t1 | MTR_2g029860 | 28.962 | 183 | 100 | 6 | 27 | 185 | 63 | 239 | 2.02e-13 | 68.2 |
MS.gene014836.t1 | MTR_4g132490 | 31.447 | 159 | 95 | 6 | 10 | 157 | 44 | 199 | 2.32e-13 | 68.2 |
MS.gene014836.t1 | MTR_5g008440 | 34.177 | 158 | 83 | 6 | 50 | 201 | 7 | 149 | 4.63e-13 | 65.5 |
MS.gene014836.t1 | MTR_3g072190 | 35.398 | 113 | 68 | 2 | 50 | 157 | 17 | 129 | 6.59e-13 | 65.9 |
MS.gene014836.t1 | MTR_3g092990 | 30.769 | 208 | 111 | 9 | 9 | 195 | 40 | 235 | 7.46e-13 | 66.6 |
MS.gene014836.t1 | MTR_4g127670 | 30.286 | 175 | 97 | 7 | 11 | 172 | 44 | 206 | 1.03e-12 | 66.2 |
MS.gene014836.t1 | MTR_8g076820 | 32.716 | 162 | 88 | 6 | 24 | 173 | 61 | 213 | 2.13e-12 | 65.1 |
MS.gene014836.t1 | MTR_4g029180 | 32.919 | 161 | 89 | 6 | 25 | 173 | 59 | 212 | 2.30e-12 | 65.1 |
MS.gene014836.t1 | MTR_1g022970 | 31.724 | 145 | 83 | 4 | 24 | 157 | 77 | 216 | 3.59e-12 | 64.7 |
MS.gene014836.t1 | MTR_2g029750 | 32.374 | 139 | 88 | 3 | 25 | 157 | 61 | 199 | 3.93e-12 | 64.7 |
MS.gene014836.t1 | MTR_2g029740 | 33.094 | 139 | 87 | 3 | 25 | 157 | 61 | 199 | 3.98e-12 | 64.7 |
MS.gene014836.t1 | MTR_7g093370 | 29.843 | 191 | 108 | 5 | 25 | 192 | 101 | 288 | 8.17e-12 | 63.9 |
MS.gene014836.t1 | MTR_3g094630 | 27.928 | 222 | 101 | 7 | 11 | 178 | 44 | 260 | 8.59e-12 | 63.5 |
MS.gene014836.t1 | MTR_5g014100 | 33.333 | 144 | 82 | 4 | 24 | 157 | 57 | 196 | 9.87e-12 | 63.2 |
MS.gene014836.t1 | MTR_3g466180 | 37.063 | 143 | 76 | 4 | 25 | 157 | 63 | 201 | 1.01e-11 | 63.2 |
MS.gene014836.t1 | MTR_3g094670 | 29.612 | 206 | 88 | 7 | 25 | 178 | 60 | 260 | 1.17e-11 | 63.2 |
MS.gene014836.t1 | MTR_2g008160 | 33.333 | 144 | 78 | 6 | 18 | 151 | 49 | 184 | 2.42e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014836.t1 | AT4G32320 | 74.500 | 200 | 51 | 0 | 8 | 207 | 98 | 297 | 2.86e-113 | 327 |
MS.gene014836.t1 | AT4G35970 | 38.095 | 210 | 105 | 7 | 6 | 201 | 11 | 209 | 6.90e-34 | 120 |
MS.gene014836.t1 | AT4G35970 | 38.095 | 210 | 105 | 7 | 6 | 201 | 11 | 209 | 2.00e-33 | 121 |
MS.gene014836.t1 | AT1G07890 | 38.235 | 204 | 103 | 7 | 12 | 201 | 20 | 214 | 5.84e-33 | 119 |
MS.gene014836.t1 | AT1G07890 | 38.235 | 204 | 103 | 7 | 12 | 201 | 20 | 214 | 6.38e-33 | 119 |
MS.gene014836.t1 | AT1G07890 | 38.235 | 204 | 103 | 7 | 12 | 201 | 20 | 214 | 6.38e-33 | 119 |
MS.gene014836.t1 | AT1G07890 | 38.235 | 204 | 103 | 7 | 12 | 201 | 20 | 214 | 6.38e-33 | 119 |
MS.gene014836.t1 | AT1G07890 | 38.235 | 204 | 103 | 7 | 12 | 201 | 20 | 214 | 6.38e-33 | 119 |
MS.gene014836.t1 | AT1G07890 | 38.235 | 204 | 103 | 7 | 12 | 201 | 20 | 214 | 6.38e-33 | 119 |
MS.gene014836.t1 | AT1G07890 | 38.235 | 204 | 103 | 7 | 12 | 201 | 20 | 214 | 6.38e-33 | 119 |
MS.gene014836.t1 | AT1G07890 | 38.235 | 204 | 103 | 7 | 12 | 201 | 20 | 214 | 6.38e-33 | 119 |
MS.gene014836.t1 | AT4G35000 | 37.963 | 216 | 110 | 7 | 6 | 207 | 12 | 217 | 2.14e-32 | 119 |
MS.gene014836.t1 | AT3G09640 | 36.123 | 227 | 110 | 7 | 6 | 207 | 4 | 220 | 1.03e-31 | 116 |
MS.gene014836.t1 | AT3G09640 | 36.123 | 227 | 110 | 7 | 6 | 207 | 4 | 220 | 1.03e-31 | 116 |
MS.gene014836.t1 | AT4G08390 | 33.491 | 212 | 95 | 8 | 27 | 201 | 126 | 328 | 1.11e-23 | 97.1 |
MS.gene014836.t1 | AT4G08390 | 33.491 | 212 | 95 | 8 | 27 | 201 | 127 | 329 | 1.18e-23 | 97.1 |
MS.gene014836.t1 | AT4G08390 | 33.491 | 212 | 95 | 8 | 27 | 201 | 127 | 329 | 1.18e-23 | 97.1 |
MS.gene014836.t1 | AT4G08390 | 33.491 | 212 | 95 | 8 | 27 | 201 | 127 | 329 | 1.18e-23 | 97.1 |
MS.gene014836.t1 | AT1G77490 | 34.483 | 232 | 104 | 9 | 9 | 201 | 86 | 308 | 4.79e-23 | 95.9 |
MS.gene014836.t1 | AT1G77490 | 34.483 | 232 | 104 | 9 | 9 | 201 | 86 | 308 | 5.12e-23 | 95.9 |
MS.gene014836.t1 | AT4G08390 | 34.921 | 189 | 83 | 7 | 27 | 178 | 127 | 312 | 6.69e-23 | 94.7 |
MS.gene014836.t1 | AT1G14550 | 33.484 | 221 | 90 | 10 | 11 | 178 | 42 | 258 | 1.41e-21 | 90.9 |
MS.gene014836.t1 | AT1G14540 | 30.493 | 223 | 93 | 8 | 11 | 178 | 37 | 252 | 1.96e-20 | 87.4 |
MS.gene014836.t1 | AT5G14130 | 36.646 | 161 | 88 | 5 | 9 | 158 | 46 | 203 | 6.00e-17 | 78.2 |
MS.gene014836.t1 | AT5G14130 | 36.646 | 161 | 88 | 5 | 9 | 158 | 87 | 244 | 1.09e-16 | 77.8 |
MS.gene014836.t1 | AT5G42180 | 31.383 | 188 | 104 | 7 | 10 | 183 | 38 | 214 | 4.09e-16 | 75.9 |
MS.gene014836.t1 | AT4G37530 | 31.844 | 179 | 94 | 7 | 11 | 173 | 47 | 213 | 1.10e-15 | 73.9 |
MS.gene014836.t1 | AT4G33420 | 36.735 | 147 | 71 | 6 | 24 | 157 | 68 | 205 | 1.25e-15 | 74.3 |
MS.gene014836.t1 | AT4G33420 | 36.735 | 147 | 71 | 6 | 24 | 157 | 115 | 252 | 1.66e-15 | 74.3 |
MS.gene014836.t1 | AT4G16270 | 36.806 | 144 | 77 | 4 | 24 | 157 | 81 | 220 | 2.22e-15 | 73.9 |
MS.gene014836.t1 | AT4G37530 | 31.844 | 179 | 94 | 7 | 11 | 173 | 47 | 213 | 2.44e-15 | 73.6 |
MS.gene014836.t1 | AT5G40150 | 35.762 | 151 | 86 | 5 | 16 | 157 | 55 | 203 | 4.38e-15 | 72.8 |
MS.gene014836.t1 | AT4G37520 | 34.969 | 163 | 80 | 6 | 26 | 172 | 60 | 212 | 1.06e-14 | 72.0 |
MS.gene014836.t1 | AT5G58390 | 32.317 | 164 | 85 | 6 | 25 | 173 | 53 | 205 | 1.33e-14 | 71.6 |
MS.gene014836.t1 | AT4G31760 | 29.353 | 201 | 108 | 6 | 27 | 201 | 63 | 255 | 1.94e-14 | 71.2 |
MS.gene014836.t1 | AT3G17070 | 32.544 | 169 | 90 | 7 | 18 | 170 | 63 | 223 | 3.46e-14 | 70.5 |
MS.gene014836.t1 | AT5G05340 | 32.639 | 144 | 81 | 4 | 25 | 157 | 62 | 200 | 4.55e-14 | 70.1 |
MS.gene014836.t1 | AT5G47000 | 32.335 | 167 | 101 | 5 | 24 | 182 | 64 | 226 | 4.64e-14 | 70.1 |
MS.gene014836.t1 | AT1G05240 | 37.162 | 148 | 75 | 5 | 21 | 157 | 54 | 194 | 1.20e-13 | 68.9 |
MS.gene014836.t1 | AT1G05250 | 37.162 | 148 | 75 | 5 | 21 | 157 | 54 | 194 | 1.20e-13 | 68.9 |
MS.gene014836.t1 | AT1G77100 | 30.516 | 213 | 129 | 9 | 10 | 206 | 39 | 248 | 1.39e-13 | 68.6 |
MS.gene014836.t1 | AT4G30170 | 29.560 | 159 | 91 | 5 | 11 | 157 | 47 | 196 | 1.54e-13 | 68.6 |
MS.gene014836.t1 | AT2G18140 | 33.129 | 163 | 86 | 7 | 24 | 173 | 66 | 218 | 1.72e-13 | 68.6 |
MS.gene014836.t1 | AT2G41480 | 34.286 | 140 | 77 | 4 | 26 | 157 | 62 | 194 | 1.94e-13 | 68.2 |
MS.gene014836.t1 | AT5G66390 | 28.571 | 189 | 112 | 5 | 25 | 192 | 65 | 251 | 2.12e-13 | 68.2 |
MS.gene014836.t1 | AT2G24800 | 28.922 | 204 | 107 | 9 | 3 | 178 | 41 | 234 | 2.13e-13 | 68.2 |
MS.gene014836.t1 | AT3G28200 | 32.667 | 150 | 92 | 4 | 16 | 157 | 44 | 192 | 3.03e-13 | 67.8 |
MS.gene014836.t1 | AT4G17690 | 34.395 | 157 | 91 | 6 | 24 | 172 | 57 | 209 | 3.64e-13 | 67.4 |
MS.gene014836.t1 | AT5G51890 | 31.847 | 157 | 84 | 6 | 25 | 169 | 58 | 203 | 4.64e-13 | 67.0 |
MS.gene014836.t1 | AT3G21770 | 31.724 | 145 | 81 | 5 | 24 | 157 | 60 | 197 | 5.73e-13 | 67.0 |
MS.gene014836.t1 | AT4G37520 | 34.969 | 163 | 77 | 7 | 26 | 172 | 60 | 209 | 1.21e-12 | 65.9 |
MS.gene014836.t1 | AT5G17820 | 31.325 | 166 | 86 | 6 | 10 | 162 | 96 | 246 | 1.52e-12 | 65.9 |
MS.gene014836.t1 | AT5G17820 | 31.325 | 166 | 86 | 6 | 10 | 162 | 43 | 193 | 2.07e-12 | 65.1 |
MS.gene014836.t1 | AT1G71695 | 31.515 | 165 | 89 | 5 | 10 | 157 | 59 | 216 | 2.42e-12 | 65.5 |
MS.gene014836.t1 | AT2G35380 | 32.394 | 142 | 86 | 4 | 24 | 157 | 61 | 200 | 3.18e-12 | 64.7 |
MS.gene014836.t1 | AT5G67400 | 33.108 | 148 | 76 | 5 | 26 | 157 | 60 | 200 | 3.27e-12 | 64.7 |
MS.gene014836.t1 | AT1G44970 | 34.014 | 147 | 77 | 5 | 24 | 157 | 76 | 215 | 3.61e-12 | 64.7 |
MS.gene014836.t1 | AT3G32980 | 35.172 | 145 | 79 | 5 | 24 | 157 | 62 | 202 | 3.65e-12 | 64.7 |
MS.gene014836.t1 | AT4G36430 | 30.435 | 161 | 93 | 5 | 24 | 173 | 61 | 213 | 6.61e-12 | 63.9 |
MS.gene014836.t1 | AT5G19880 | 34.459 | 148 | 75 | 4 | 25 | 157 | 57 | 197 | 6.81e-12 | 63.9 |
MS.gene014836.t1 | AT1G05260 | 31.677 | 161 | 89 | 6 | 24 | 173 | 57 | 207 | 7.48e-12 | 63.5 |
MS.gene014836.t1 | AT4G33870 | 30.128 | 156 | 100 | 5 | 10 | 157 | 83 | 237 | 1.32e-11 | 63.2 |
MS.gene014836.t1 | AT3G17070 | 36.290 | 124 | 71 | 5 | 54 | 170 | 38 | 160 | 1.61e-11 | 62.4 |
MS.gene014836.t1 | AT2G18150 | 30.061 | 163 | 91 | 6 | 24 | 173 | 67 | 219 | 1.95e-11 | 62.4 |
MS.gene014836.t1 | AT3G49960 | 30.120 | 166 | 91 | 6 | 10 | 157 | 42 | 200 | 2.64e-11 | 62.0 |
Find 41 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATATTATAAGGTTCTTT+TGG | 0.228709 | 3.3:+87775966 | MS.gene014836:CDS |
GAGGAAACTCTTGATGCTTC+TGG | 0.303467 | 3.3:+87775516 | MS.gene014836:CDS |
CTTTACCTTTGTTAGTATCC+TGG | 0.313796 | 3.3:+87775100 | MS.gene014836:intron |
GAGAAGCCATGGACGCCTTC+TGG | 0.322202 | 3.3:+87775988 | MS.gene014836:CDS |
ACTCTTGGAAGTAAAGGTTT+TGG | 0.369606 | 3.3:+87775922 | MS.gene014836:CDS |
GGCTGCAGGTGTGCTTCGTT+TGG | 0.388465 | 3.3:+87774052 | MS.gene014836:CDS |
GGAAGTTTCCCTTCAGGATC+AGG | 0.389840 | 3.3:-87775492 | None:intergenic |
TCCTCGGGAAGTTTCCCTTC+AGG | 0.392970 | 3.3:-87775498 | None:intergenic |
TTTGAAATTGATGACAATAC+AGG | 0.426747 | 3.3:+87774095 | MS.gene014836:CDS |
TTTACCTTTGTTAGTATCCT+GGG | 0.437764 | 3.3:+87775101 | MS.gene014836:intron |
TATGAATTGTCAAAAGAAGT+AGG | 0.453434 | 3.3:-87775949 | None:intergenic |
TTTCAAAAGTTCCAGCATCA+TGG | 0.457488 | 3.3:-87774079 | None:intergenic |
TTGTCTGGAGCTCACACTCT+TGG | 0.477240 | 3.3:+87775907 | MS.gene014836:CDS |
TTGAGGATGATGAATGCTTA+AGG | 0.477644 | 3.3:+87776179 | MS.gene014836:CDS |
CAAGAACTAGTAGCTTTGTC+TGG | 0.485206 | 3.3:+87775892 | MS.gene014836:CDS |
TTGAGGAAGGTATTGACAAA+GGG | 0.514007 | 3.3:+87774026 | MS.gene014836:CDS |
ATGAATTGTCAAAAGAAGTA+GGG | 0.515097 | 3.3:-87775948 | None:intergenic |
TTCAGATCACGCACTTGTTG+AGG | 0.515812 | 3.3:+87776162 | MS.gene014836:CDS |
CCGAGCGAAACTGTGATAGT+AGG | 0.518423 | 3.3:-87775174 | None:intergenic |
GTTGTTGTAGGTGGTATGAA+TGG | 0.519310 | 3.3:+87774736 | MS.gene014836:intron |
AGAAGCATCAAGAGTTTCCT+CGG | 0.519712 | 3.3:-87775514 | None:intergenic |
TTGACAAAGGGAAAGGCTGC+AGG | 0.522171 | 3.3:+87774038 | MS.gene014836:CDS |
GCTCACACTCTTGGAAGTAA+AGG | 0.522477 | 3.3:+87775916 | MS.gene014836:CDS |
GCGGACGTTATTGCTGTCGC+TGG | 0.524070 | 3.3:+87775123 | MS.gene014836:CDS |
GTTGAGGAAGGTATTGACAA+AGG | 0.532606 | 3.3:+87774025 | MS.gene014836:CDS |
ATTGAAAGACCTGAAAATGC+TGG | 0.537314 | 3.3:+87774775 | MS.gene014836:CDS |
CAGATAGATGCTATCCATCC+AGG | 0.541954 | 3.3:+87775011 | MS.gene014836:CDS |
ACTTTACCAGAAGGCGTCCA+TGG | 0.549342 | 3.3:-87775994 | None:intergenic |
GACAGCAATAACGTCCGCCC+AGG | 0.554001 | 3.3:-87775118 | None:intergenic |
TCAACAAGTGCGTGATCTGA+AGG | 0.564701 | 3.3:-87776160 | None:intergenic |
GGTGGTATGTCGACTATGAT+CGG | 0.580931 | 3.3:+87776133 | MS.gene014836:intron |
TTCTAATTAAACAAGAGTTG+AGG | 0.581889 | 3.3:+87774009 | MS.gene014836:CDS |
GCTGAAGCAGTTGAAGTATG+TGG | 0.592512 | 3.3:+87775147 | MS.gene014836:CDS |
GAAGCATCAAGAGTTTCCTC+GGG | 0.599360 | 3.3:-87775513 | None:intergenic |
CCTACTATCACAGTTTCGCT+CGG | 0.605954 | 3.3:+87775174 | MS.gene014836:CDS |
AGAGAAAACAAGGACCTGGA+TGG | 0.607635 | 3.3:-87775025 | None:intergenic |
GAAGGTATTGACAAAGGGAA+AGG | 0.621122 | 3.3:+87774031 | MS.gene014836:CDS |
AATTAAACAAGAGTTGAGGA+AGG | 0.623996 | 3.3:+87774013 | MS.gene014836:CDS |
TCCTGAAGGGAAACTTCCCG+AGG | 0.679146 | 3.3:+87775497 | MS.gene014836:CDS |
GAAGCAGTTGAAGTATGTGG+AGG | 0.696962 | 3.3:+87775150 | MS.gene014836:CDS |
ACCTTTGTTAGTATCCTGGG+CGG | 0.708491 | 3.3:+87775104 | MS.gene014836:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATGAATGAAAATATTAT+AGG | - | chr3.3:87775458-87775477 | None:intergenic | 10.0% |
!!! | AAATCATAATTTTTTTTTTG+AGG | - | chr3.3:87775634-87775653 | None:intergenic | 10.0% |
!!! | AATATTTTCATTCATATTAA+TGG | + | chr3.3:87775460-87775479 | MS.gene014836:intron | 10.0% |
!!! | TATATTATATTCATGTTTTA+AGG | + | chr3.3:87773415-87773434 | MS.gene014836:intron | 10.0% |
!!! | TTTTTTTACTTTCTTTTATT+GGG | + | chr3.3:87773841-87773860 | MS.gene014836:intron | 10.0% |
!!! | TTTTTTTTACTTTCTTTTAT+TGG | + | chr3.3:87773840-87773859 | MS.gene014836:intron | 10.0% |
!! | TAGATTTAATGAATTAATAC+AGG | - | chr3.3:87773397-87773416 | None:intergenic | 15.0% |
!!! | AAAGGTAAAGTAAATTTTAT+TGG | - | chr3.3:87775090-87775109 | None:intergenic | 15.0% |
!!! | GATATTTTTTTATGTTTTCT+TGG | + | chr3.3:87774601-87774620 | MS.gene014836:intron | 15.0% |
!!! | TGAATATTATTTTCAGTTTT+AGG | + | chr3.3:87774267-87774286 | MS.gene014836:intron | 15.0% |
!!! | TTTTGACAATTCATATTATA+AGG | + | chr3.3:87775957-87775976 | MS.gene014836:CDS | 15.0% |
!! | AAAAAAAATCAAAACAGTAC+TGG | - | chr3.3:87774326-87774345 | None:intergenic | 20.0% |
!! | AACAAGCTAATAAATATGAT+AGG | - | chr3.3:87776051-87776070 | None:intergenic | 20.0% |
!! | AATGAAAATATTATAGGCAA+AGG | - | chr3.3:87775452-87775471 | None:intergenic | 20.0% |
!! | AATTAATACAGGAATAAGAT+TGG | - | chr3.3:87773386-87773405 | None:intergenic | 20.0% |
!! | AGCTCAAATAAAACAATTTA+AGG | - | chr3.3:87773619-87773638 | None:intergenic | 20.0% |
!! | ATTAATACAGGAATAAGATT+GGG | - | chr3.3:87773385-87773404 | None:intergenic | 20.0% |
!! | TATTCAAGTAATAAACGTAA+AGG | - | chr3.3:87774856-87774875 | None:intergenic | 20.0% |
!! | TCATTCATATTAATGGTATA+GGG | + | chr3.3:87775467-87775486 | MS.gene014836:intron | 20.0% |
!! | TCTGAGCAAAAAAAATAAAT+TGG | + | chr3.3:87774569-87774588 | MS.gene014836:intron | 20.0% |
!! | TTCATGTAGATTTAATTCAT+GGG | + | chr3.3:87775396-87775415 | MS.gene014836:intron | 20.0% |
!! | TTCATTCATATTAATGGTAT+AGG | + | chr3.3:87775466-87775485 | MS.gene014836:intron | 20.0% |
!!! | TTCATATTATAAGGTTCTTT+TGG | + | chr3.3:87775966-87775985 | MS.gene014836:CDS | 20.0% |
! | AACACAAATGCTAAGTAAAT+GGG | - | chr3.3:87775593-87775612 | None:intergenic | 25.0% |
! | AATAAGCTGAAAATAGTTGA+TGG | - | chr3.3:87773698-87773717 | None:intergenic | 25.0% |
! | AATATAAAATCAGGTTTACC+GGG | - | chr3.3:87774444-87774463 | None:intergenic | 25.0% |
! | AATCTATCCTAAAGAGTTTA+TGG | - | chr3.3:87773722-87773741 | None:intergenic | 25.0% |
! | AATTTCTTGATCACCTAATT+TGG | + | chr3.3:87774382-87774401 | MS.gene014836:intron | 25.0% |
! | ATCAAGAAATTCAAAAAGTC+TGG | - | chr3.3:87774898-87774917 | None:intergenic | 25.0% |
! | ATGAATTGTCAAAAGAAGTA+GGG | - | chr3.3:87775951-87775970 | None:intergenic | 25.0% |
! | ATGTGCTAATATTTGTCATT+GGG | + | chr3.3:87775790-87775809 | MS.gene014836:intron | 25.0% |
! | ATTCATATTAATGGTATAGG+GGG | + | chr3.3:87775469-87775488 | MS.gene014836:intron | 25.0% |
! | CAATATAAAATCAGGTTTAC+CGG | - | chr3.3:87774445-87774464 | None:intergenic | 25.0% |
! | CATTCATATTAATGGTATAG+GGG | + | chr3.3:87775468-87775487 | MS.gene014836:intron | 25.0% |
! | CTTATTTCCATAAACTCTTT+AGG | + | chr3.3:87773712-87773731 | MS.gene014836:intron | 25.0% |
! | CTTCATGTAGATTTAATTCA+TGG | + | chr3.3:87775395-87775414 | MS.gene014836:intron | 25.0% |
! | GAAATCTGAATCTTGTATAA+AGG | + | chr3.3:87774201-87774220 | MS.gene014836:intron | 25.0% |
! | TAACACAAATGCTAAGTAAA+TGG | - | chr3.3:87775594-87775613 | None:intergenic | 25.0% |
! | TATGAATTGTCAAAAGAAGT+AGG | - | chr3.3:87775952-87775971 | None:intergenic | 25.0% |
! | TGTGAAAGAAAAGTTTCAAA+TGG | - | chr3.3:87775867-87775886 | None:intergenic | 25.0% |
! | TTCTAATTAAACAAGAGTTG+AGG | + | chr3.3:87774009-87774028 | MS.gene014836:CDS | 25.0% |
!! | TTTGAAATTGATGACAATAC+AGG | + | chr3.3:87774095-87774114 | MS.gene014836:CDS | 25.0% |
!!! | AAACTCTTTAGGATAGATTA+AGG | + | chr3.3:87773723-87773742 | MS.gene014836:intron | 25.0% |
!!! | CATCTTATATTTTAATTGCC+AGG | + | chr3.3:87774927-87774946 | MS.gene014836:intron | 25.0% |
!!! | GTTGTTTTCATAAGTTATCT+TGG | - | chr3.3:87773535-87773554 | None:intergenic | 25.0% |
AAATAAATACCCGTGTTGAA+AGG | + | chr3.3:87774227-87774246 | MS.gene014836:intron | 30.0% | |
AATTAAACAAGAGTTGAGGA+AGG | + | chr3.3:87774013-87774032 | MS.gene014836:CDS | 30.0% | |
ACAAATTACCAGAGAAAACA+AGG | - | chr3.3:87775038-87775057 | None:intergenic | 30.0% | |
AGTAATAAACGTAAAGGAGA+AGG | - | chr3.3:87774850-87774869 | None:intergenic | 30.0% | |
ATAGCAAGTGATTATGCTAA+TGG | - | chr3.3:87773645-87773664 | None:intergenic | 30.0% | |
ATGCATGAGCAAAATTATTC+TGG | - | chr3.3:87775838-87775857 | None:intergenic | 30.0% | |
CAACTTGGCAATATAAAATC+AGG | - | chr3.3:87774453-87774472 | None:intergenic | 30.0% | |
CAAGATTCAGATTTCTTCAT+CGG | - | chr3.3:87774196-87774215 | None:intergenic | 30.0% | |
CAATGACAAATATTAGCACA+TGG | - | chr3.3:87775791-87775810 | None:intergenic | 30.0% | |
CATAGACATTACATACAACT+TGG | - | chr3.3:87774468-87774487 | None:intergenic | 30.0% | |
CATGTGCTAATATTTGTCAT+TGG | + | chr3.3:87775789-87775808 | MS.gene014836:intron | 30.0% | |
GTAATAAACGTAAAGGAGAA+GGG | - | chr3.3:87774849-87774868 | None:intergenic | 30.0% | |
GTCTATGTCTATTATCAATG+TGG | + | chr3.3:87774481-87774500 | MS.gene014836:intron | 30.0% | |
TAATAAACGTAAAGGAGAAG+GGG | - | chr3.3:87774848-87774867 | None:intergenic | 30.0% | |
TAGGTGATCAAGAAATTAAG+CGG | - | chr3.3:87774379-87774398 | None:intergenic | 30.0% | |
TCAAATAAGTCAATCCAAGT+AGG | - | chr3.3:87773441-87773460 | None:intergenic | 30.0% | |
TCCAATAGTAATACACACAA+TGG | - | chr3.3:87773867-87773886 | None:intergenic | 30.0% | |
TGCTTGTCATATCCTATATA+CGG | - | chr3.3:87775244-87775263 | None:intergenic | 30.0% | |
TGGTCTGAAAAAATCAGTAA+AGG | + | chr3.3:87774795-87774814 | MS.gene014836:CDS | 30.0% | |
TGTGTGTATTACTATTGGAT+TGG | + | chr3.3:87773868-87773887 | MS.gene014836:intron | 30.0% | |
TTGTCTGTTTATGTTGTTGT+AGG | + | chr3.3:87774724-87774743 | MS.gene014836:intron | 30.0% | |
TTGTTCTTTATACAACAGCA+TGG | - | chr3.3:87775352-87775371 | None:intergenic | 30.0% | |
TTTACCTTTGTTAGTATCCT+GGG | + | chr3.3:87775101-87775120 | MS.gene014836:intron | 30.0% | |
! | AAAAATCAAAACAGTACTGG+CGG | - | chr3.3:87774323-87774342 | None:intergenic | 30.0% |
! | AGAAGATATTCTTTTGTACC+TGG | - | chr3.3:87773993-87774012 | None:intergenic | 30.0% |
! | ATTTAAAACCAGAGCAACAA+AGG | + | chr3.3:87775732-87775751 | MS.gene014836:intron | 30.0% |
! | GAGTTTTACATAGTACAACA+GGG | - | chr3.3:87774422-87774441 | None:intergenic | 30.0% |
! | GGATTTATCACATGTTGTTT+AGG | + | chr3.3:87774968-87774987 | MS.gene014836:intron | 30.0% |
! | TACTATTGGATTGGATTAGA+GGG | + | chr3.3:87773877-87773896 | MS.gene014836:intron | 30.0% |
! | TTACTATTGGATTGGATTAG+AGG | + | chr3.3:87773876-87773895 | MS.gene014836:intron | 30.0% |
!!! | TGTTGCTCTGGTTTTAAATT+AGG | - | chr3.3:87775731-87775750 | None:intergenic | 30.0% |
AAGAGATGCTTCCAGAAAAA+AGG | + | chr3.3:87775543-87775562 | MS.gene014836:CDS | 35.0% | |
ACCAGACAATCATCAACTTA+CGG | - | chr3.3:87775213-87775232 | None:intergenic | 35.0% | |
ATCAAATCGACACTTACTAC+TGG | - | chr3.3:87775062-87775081 | None:intergenic | 35.0% | |
ATCCTTAGGAGAAAAGATCA+CGG | - | chr3.3:87775268-87775287 | None:intergenic | 35.0% | |
ATTGAAAGACCTGAAAATGC+TGG | + | chr3.3:87774775-87774794 | MS.gene014836:CDS | 35.0% | |
CAGCTTATGACATGTTCATT+AGG | + | chr3.3:87773482-87773501 | MS.gene014836:intron | 35.0% | |
CATGGACATAACTCAAAAGT+AGG | - | chr3.3:87775334-87775353 | None:intergenic | 35.0% | |
CTGTATAAAAGAGAACCAGT+GGG | - | chr3.3:87776114-87776133 | None:intergenic | 35.0% | |
CTTAGCATTTGTGTTATGCA+TGG | + | chr3.3:87775598-87775617 | MS.gene014836:intron | 35.0% | |
CTTTACCTTTGTTAGTATCC+TGG | + | chr3.3:87775100-87775119 | MS.gene014836:intron | 35.0% | |
GCCATTGTGTGTATTACTAT+TGG | + | chr3.3:87773863-87773882 | MS.gene014836:intron | 35.0% | |
GTTGTACTATGTAAAACTCC+CGG | + | chr3.3:87774423-87774442 | MS.gene014836:intron | 35.0% | |
TAATACCAGTCCTTTCAACA+CGG | - | chr3.3:87774240-87774259 | None:intergenic | 35.0% | |
TCTGTTTATGTTGTTGTAGG+TGG | + | chr3.3:87774727-87774746 | MS.gene014836:intron | 35.0% | |
TGTATGGGTAAATTTGCACA+AGG | + | chr3.3:87774546-87774565 | MS.gene014836:intron | 35.0% | |
TTGAGGATGATGAATGCTTA+AGG | + | chr3.3:87776179-87776198 | MS.gene014836:CDS | 35.0% | |
TTTCAAAAGTTCCAGCATCA+TGG | - | chr3.3:87774082-87774101 | None:intergenic | 35.0% | |
! | ACTCTTGGAAGTAAAGGTTT+TGG | + | chr3.3:87775922-87775941 | MS.gene014836:CDS | 35.0% |
! | AGCGCTTCATTCTAAAGAAA+TGG | + | chr3.3:87773800-87773819 | MS.gene014836:intron | 35.0% |
! | GGAGTTTTACATAGTACAAC+AGG | - | chr3.3:87774423-87774442 | None:intergenic | 35.0% |
! | GTGTTATGCATGGATGATTT+TGG | + | chr3.3:87775608-87775627 | MS.gene014836:intron | 35.0% |
! | TTGTACCTGGTCTTCATAAT+GGG | - | chr3.3:87773980-87773999 | None:intergenic | 35.0% |
! | TTTGTACCTGGTCTTCATAA+TGG | - | chr3.3:87773981-87774000 | None:intergenic | 35.0% |
! | TTTTACCCATTATGAAGACC+AGG | + | chr3.3:87773972-87773991 | MS.gene014836:intron | 35.0% |
!! | ACTTGTTGTTTGTCATCCTT+AGG | - | chr3.3:87775282-87775301 | None:intergenic | 35.0% |
!! | CATGTCATAAGCTGTTTTCA+TGG | - | chr3.3:87773476-87773495 | None:intergenic | 35.0% |
!! | CTTCATAATGGGTAAAAGCA+AGG | - | chr3.3:87773969-87773988 | None:intergenic | 35.0% |
!! | GAAGCTGTTTCTTTCTGAAA+TGG | - | chr3.3:87775379-87775398 | None:intergenic | 35.0% |
!! | TGAGTTGTTACTTTACCAGA+AGG | - | chr3.3:87776006-87776025 | None:intergenic | 35.0% |
!! | TTGAGGAAGGTATTGACAAA+GGG | + | chr3.3:87774026-87774045 | MS.gene014836:CDS | 35.0% |
!! | TTTTTCAGACCAGCATTTTC+AGG | - | chr3.3:87774787-87774806 | None:intergenic | 35.0% |
!!! | TTCATGTTTTAAGGCCTACT+TGG | + | chr3.3:87773424-87773443 | MS.gene014836:intron | 35.0% |
AATACCAGTCCTTTCAACAC+GGG | - | chr3.3:87774239-87774258 | None:intergenic | 40.0% | |
CATGTGCTTGATGCCAAATT+AGG | - | chr3.3:87774398-87774417 | None:intergenic | 40.0% | |
CCTGTATAAAAGAGAACCAG+TGG | - | chr3.3:87776115-87776134 | None:intergenic | 40.0% | |
CTAATTTGGCATCAAGCACA+TGG | + | chr3.3:87774396-87774415 | MS.gene014836:intron | 40.0% | |
GCTATAATTGACATGCTCGT+TGG | + | chr3.3:87773930-87773949 | MS.gene014836:intron | 40.0% | |
GGAATAAGATTGGGTGCTTA+CGG | - | chr3.3:87773376-87773395 | None:intergenic | 40.0% | |
GTTGTTGTAGGTGGTATGAA+TGG | + | chr3.3:87774736-87774755 | MS.gene014836:intron | 40.0% | |
TAAAACCAGAGCAACAAAGG+AGG | + | chr3.3:87775735-87775754 | MS.gene014836:intron | 40.0% | |
TGGTACTCTAGTCCGTATAT+AGG | + | chr3.3:87775229-87775248 | MS.gene014836:intron | 40.0% | |
! | AACCGTGATCTTTTCTCCTA+AGG | + | chr3.3:87775263-87775282 | MS.gene014836:intron | 40.0% |
! | ACAGGTATACATCTAGCTCA+GGG | + | chr3.3:87774113-87774132 | MS.gene014836:intron | 40.0% |
! | ATTTTCCTCCTTTGTTGCTC+TGG | - | chr3.3:87775743-87775762 | None:intergenic | 40.0% |
! | TACAGGTATACATCTAGCTC+AGG | + | chr3.3:87774112-87774131 | MS.gene014836:intron | 40.0% |
!! | ACCGTAAGTTGATGATTGTC+TGG | + | chr3.3:87775209-87775228 | MS.gene014836:intron | 40.0% |
!! | AGAAGCATCAAGAGTTTCCT+CGG | - | chr3.3:87775517-87775536 | None:intergenic | 40.0% |
!! | CAAGAACTAGTAGCTTTGTC+TGG | + | chr3.3:87775892-87775911 | MS.gene014836:CDS | 40.0% |
!! | CTGGTTCTCTTTTATACAGG+TGG | + | chr3.3:87776115-87776134 | MS.gene014836:intron | 40.0% |
!! | GAAGGTATTGACAAAGGGAA+AGG | + | chr3.3:87774031-87774050 | MS.gene014836:CDS | 40.0% |
!! | GTTGAGGAAGGTATTGACAA+AGG | + | chr3.3:87774025-87774044 | MS.gene014836:CDS | 40.0% |
!! | TCTTCATCGGTTGATTTTGC+TGG | - | chr3.3:87774183-87774202 | None:intergenic | 40.0% |
!!! | CCACTGGTTCTCTTTTATAC+AGG | + | chr3.3:87776112-87776131 | MS.gene014836:intron | 40.0% |
!!! | CTCACGAAAAGCCTTTTTTC+TGG | - | chr3.3:87775557-87775576 | None:intergenic | 40.0% |
!!! | TTTTTTTCACTCTCACCCAC+TGG | + | chr3.3:87776096-87776115 | MS.gene014836:intron | 40.0% |
AATACCCGTGTTGAAAGGAC+TGG | + | chr3.3:87774232-87774251 | MS.gene014836:intron | 45.0% | |
ACCTTTGTTAGTATCCTGGG+CGG | + | chr3.3:87775104-87775123 | MS.gene014836:intron | 45.0% | |
AGAGAAAACAAGGACCTGGA+TGG | - | chr3.3:87775028-87775047 | None:intergenic | 45.0% | |
CAGATAGATGCTATCCATCC+AGG | + | chr3.3:87775011-87775030 | MS.gene014836:CDS | 45.0% | |
CCTACTATCACAGTTTCGCT+CGG | + | chr3.3:87775174-87775193 | MS.gene014836:CDS | 45.0% | |
CTCGGCAATTGCATCTGTAT+GGG | + | chr3.3:87774531-87774550 | MS.gene014836:intron | 45.0% | |
GAAGCAGTTGAAGTATGTGG+AGG | + | chr3.3:87775150-87775169 | MS.gene014836:CDS | 45.0% | |
GAGGAAACTCTTGATGCTTC+TGG | + | chr3.3:87775516-87775535 | MS.gene014836:CDS | 45.0% | |
GCTCACACTCTTGGAAGTAA+AGG | + | chr3.3:87775916-87775935 | MS.gene014836:CDS | 45.0% | |
GCTGAAGCAGTTGAAGTATG+TGG | + | chr3.3:87775147-87775166 | MS.gene014836:CDS | 45.0% | |
TACCAGAGAAAACAAGGACC+TGG | - | chr3.3:87775032-87775051 | None:intergenic | 45.0% | |
TCAACAAGTGCGTGATCTGA+AGG | - | chr3.3:87776163-87776182 | None:intergenic | 45.0% | |
! | CAGGTATACATCTAGCTCAG+GGG | + | chr3.3:87774114-87774133 | MS.gene014836:intron | 45.0% |
! | GAAGCATCAAGAGTTTCCTC+GGG | - | chr3.3:87775516-87775535 | None:intergenic | 45.0% |
! | GGTGGTATGTCGACTATGAT+CGG | + | chr3.3:87776133-87776152 | MS.gene014836:intron | 45.0% |
! | TTCAGATCACGCACTTGTTG+AGG | + | chr3.3:87776162-87776181 | MS.gene014836:CDS | 45.0% |
!! | AAAACAGTACTGGCGGTATG+TGG | - | chr3.3:87774316-87774335 | None:intergenic | 45.0% |
!! | AGGTTCTTTTGGAGAAGCCA+TGG | + | chr3.3:87775977-87775996 | MS.gene014836:CDS | 45.0% |
!!! | ATCCAGGTCCTTGTTTTCTC+TGG | + | chr3.3:87775027-87775046 | MS.gene014836:intron | 45.0% |
!!! | CGTTTGGTTTTCCATGATGC+TGG | + | chr3.3:87774068-87774087 | MS.gene014836:CDS | 45.0% |
CCGAGCGAAACTGTGATAGT+AGG | - | chr3.3:87775177-87775196 | None:intergenic | 50.0% | |
GCTCGGCAATTGCATCTGTA+TGG | + | chr3.3:87774530-87774549 | MS.gene014836:intron | 50.0% | |
GGAAGTTTCCCTTCAGGATC+AGG | - | chr3.3:87775495-87775514 | None:intergenic | 50.0% | |
TCCGCCCAGGATACTAACAA+AGG | - | chr3.3:87775108-87775127 | None:intergenic | 50.0% | |
TTGACAAAGGGAAAGGCTGC+AGG | + | chr3.3:87774038-87774057 | MS.gene014836:CDS | 50.0% | |
! | GGATTGGATTAGAGGGAGTG+AGG | + | chr3.3:87773884-87773903 | MS.gene014836:intron | 50.0% |
! | TTGGATTAGAGGGAGTGAGG+AGG | + | chr3.3:87773887-87773906 | MS.gene014836:intron | 50.0% |
! | TTGTCTGGAGCTCACACTCT+TGG | + | chr3.3:87775907-87775926 | MS.gene014836:CDS | 50.0% |
!! | ACTTTACCAGAAGGCGTCCA+TGG | - | chr3.3:87775997-87776016 | None:intergenic | 50.0% |
ACTGAGACGTTAGCTGAGCC+TGG | - | chr3.3:87774948-87774967 | None:intergenic | 55.0% | |
AGGCTCAGCTAACGTCTCAG+TGG | + | chr3.3:87774947-87774966 | MS.gene014836:intron | 55.0% | |
ATAGGGGGCCTGATCCTGAA+GGG | + | chr3.3:87775484-87775503 | MS.gene014836:intron | 55.0% | |
TATAGGGGGCCTGATCCTGA+AGG | + | chr3.3:87775483-87775502 | MS.gene014836:intron | 55.0% | |
TCCTCGGGAAGTTTCCCTTC+AGG | - | chr3.3:87775501-87775520 | None:intergenic | 55.0% | |
TCCTGAAGGGAAACTTCCCG+AGG | + | chr3.3:87775497-87775516 | MS.gene014836:CDS | 55.0% | |
GACAGCAATAACGTCCGCCC+AGG | - | chr3.3:87775121-87775140 | None:intergenic | 60.0% | |
GAGAAGCCATGGACGCCTTC+TGG | + | chr3.3:87775988-87776007 | MS.gene014836:CDS | 60.0% | |
GCGGACGTTATTGCTGTCGC+TGG | + | chr3.3:87775123-87775142 | MS.gene014836:CDS | 60.0% | |
GCTCAGTGTGCGCGTTTGCT+CGG | + | chr3.3:87774513-87774532 | MS.gene014836:intron | 60.0% | |
GGCTGCAGGTGTGCTTCGTT+TGG | + | chr3.3:87774052-87774071 | MS.gene014836:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 87773370 | 87776216 | 87773370 | ID=MS.gene014836 |
chr3.3 | mRNA | 87773370 | 87776216 | 87773370 | ID=MS.gene014836.t1;Parent=MS.gene014836 |
chr3.3 | exon | 87773370 | 87773374 | 87773370 | ID=MS.gene014836.t1.exon1;Parent=MS.gene014836.t1 |
chr3.3 | CDS | 87773370 | 87773374 | 87773370 | ID=cds.MS.gene014836.t1;Parent=MS.gene014836.t1 |
chr3.3 | exon | 87773989 | 87774116 | 87773989 | ID=MS.gene014836.t1.exon2;Parent=MS.gene014836.t1 |
chr3.3 | CDS | 87773989 | 87774116 | 87773989 | ID=cds.MS.gene014836.t1;Parent=MS.gene014836.t1 |
chr3.3 | exon | 87774746 | 87774816 | 87774746 | ID=MS.gene014836.t1.exon3;Parent=MS.gene014836.t1 |
chr3.3 | CDS | 87774746 | 87774816 | 87774746 | ID=cds.MS.gene014836.t1;Parent=MS.gene014836.t1 |
chr3.3 | exon | 87774990 | 87775032 | 87774990 | ID=MS.gene014836.t1.exon4;Parent=MS.gene014836.t1 |
chr3.3 | CDS | 87774990 | 87775032 | 87774990 | ID=cds.MS.gene014836.t1;Parent=MS.gene014836.t1 |
chr3.3 | exon | 87775115 | 87775211 | 87775115 | ID=MS.gene014836.t1.exon5;Parent=MS.gene014836.t1 |
chr3.3 | CDS | 87775115 | 87775211 | 87775115 | ID=cds.MS.gene014836.t1;Parent=MS.gene014836.t1 |
chr3.3 | exon | 87775488 | 87775571 | 87775488 | ID=MS.gene014836.t1.exon6;Parent=MS.gene014836.t1 |
chr3.3 | CDS | 87775488 | 87775571 | 87775488 | ID=cds.MS.gene014836.t1;Parent=MS.gene014836.t1 |
chr3.3 | exon | 87775888 | 87776009 | 87775888 | ID=MS.gene014836.t1.exon7;Parent=MS.gene014836.t1 |
chr3.3 | CDS | 87775888 | 87776009 | 87775888 | ID=cds.MS.gene014836.t1;Parent=MS.gene014836.t1 |
chr3.3 | exon | 87776134 | 87776216 | 87776134 | ID=MS.gene014836.t1.exon8;Parent=MS.gene014836.t1 |
chr3.3 | CDS | 87776134 | 87776216 | 87776134 | ID=cds.MS.gene014836.t1;Parent=MS.gene014836.t1 |
Gene Sequence |
Protein sequence |