Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072888.t1 | XP_003603389.1 | 95.3 | 320 | 10 | 2 | 1 | 316 | 2 | 320 | 4.00E-169 | 604 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072888.t1 | Q8GY91 | 66.1 | 280 | 85 | 3 | 37 | 316 | 60 | 329 | 9.6e-103 | 374.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072888.t1 | G7JB12 | 95.3 | 320 | 10 | 2 | 1 | 316 | 2 | 320 | 2.9e-169 | 604.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene072888 | 0.802808 | 4.71E-49 | -1.69E-46 |
| MS.gene049284 | MS.gene072888 | 0.883377 | 4.73E-71 | -1.69E-46 |
| MS.gene049351 | MS.gene072888 | 0.874712 | 5.45E-68 | -1.69E-46 |
| MS.gene049389 | MS.gene072888 | 0.845385 | 4.20E-59 | -1.69E-46 |
| MS.gene049427 | MS.gene072888 | 0.85285 | 3.52E-61 | -1.69E-46 |
| MS.gene049491 | MS.gene072888 | 0.859369 | 4.34E-63 | -1.69E-46 |
| MS.gene049599 | MS.gene072888 | -0.835515 | 1.60E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene072888 | 0.832898 | 7.27E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene072888 | 0.855715 | 5.24E-62 | -1.69E-46 |
| MS.gene049662 | MS.gene072888 | 0.859745 | 3.34E-63 | -1.69E-46 |
| MS.gene049758 | MS.gene072888 | 0.899141 | 2.66E-77 | -1.69E-46 |
| MS.gene049760 | MS.gene072888 | 0.813275 | 2.78E-51 | -1.69E-46 |
| MS.gene049910 | MS.gene072888 | 0.814242 | 1.70E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene072888 | 0.868806 | 4.96E-66 | -1.69E-46 |
| MS.gene050099 | MS.gene072888 | 0.836638 | 8.32E-57 | -1.69E-46 |
| MS.gene050128 | MS.gene072888 | 0.848111 | 7.55E-60 | -1.69E-46 |
| MS.gene050301 | MS.gene072888 | 0.923877 | 1.49E-89 | -1.69E-46 |
| MS.gene050397 | MS.gene072888 | 0.885669 | 6.66E-72 | -1.69E-46 |
| MS.gene050404 | MS.gene072888 | 0.844332 | 8.07E-59 | -1.69E-46 |
| MS.gene050406 | MS.gene072888 | 0.839307 | 1.71E-57 | -1.69E-46 |
| MS.gene050426 | MS.gene072888 | -0.808041 | 3.76E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene072888 | 0.857538 | 1.52E-62 | -1.69E-46 |
| MS.gene050464 | MS.gene072888 | 0.872327 | 3.46E-67 | -1.69E-46 |
| MS.gene050529 | MS.gene072888 | 0.905238 | 5.30E-80 | -1.69E-46 |
| MS.gene050558 | MS.gene072888 | 0.819406 | 1.18E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene072888 | 0.803043 | 4.21E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene072888 | 0.839193 | 1.83E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene072888 | 0.841148 | 5.66E-58 | -1.69E-46 |
| MS.gene050770 | MS.gene072888 | 0.843435 | 1.40E-58 | -1.69E-46 |
| MS.gene050783 | MS.gene072888 | 0.800822 | 1.20E-48 | -1.69E-46 |
| MS.gene050812 | MS.gene072888 | 0.830266 | 3.24E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene072888 | 0.917373 | 5.75E-86 | -1.69E-46 |
| MS.gene05105 | MS.gene072888 | 0.805292 | 1.43E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene072888 | -0.819942 | 8.91E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene072888 | 0.916237 | 2.27E-85 | -1.69E-46 |
| MS.gene051582 | MS.gene072888 | 0.854839 | 9.42E-62 | -1.69E-46 |
| MS.gene051662 | MS.gene072888 | 0.840831 | 6.86E-58 | -1.69E-46 |
| MS.gene051663 | MS.gene072888 | 0.845123 | 4.94E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene072888 | 0.809018 | 2.33E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene072888 | 0.846815 | 1.71E-59 | -1.69E-46 |
| MS.gene051877 | MS.gene072888 | 0.81751 | 3.18E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene072888 | 0.813469 | 2.52E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene072888 | -0.800342 | 1.51E-48 | -1.69E-46 |
| MS.gene052077 | MS.gene072888 | 0.823628 | 1.25E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene072888 | 0.910938 | 1.07E-82 | -1.69E-46 |
| MS.gene052178 | MS.gene072888 | 0.8932 | 7.84E-75 | -1.69E-46 |
| MS.gene052188 | MS.gene072888 | 0.879539 | 1.15E-69 | -1.69E-46 |
| MS.gene052207 | MS.gene072888 | 0.807045 | 6.12E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene072888 | 0.857386 | 1.69E-62 | -1.69E-46 |
| MS.gene052290 | MS.gene072888 | 0.839084 | 1.96E-57 | -1.69E-46 |
| MS.gene052310 | MS.gene072888 | 0.891923 | 2.55E-74 | -1.69E-46 |
| MS.gene052322 | MS.gene072888 | 0.847273 | 1.28E-59 | -1.69E-46 |
| MS.gene052326 | MS.gene072888 | 0.887025 | 2.05E-72 | -1.69E-46 |
| MS.gene052340 | MS.gene072888 | 0.876865 | 9.94E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene072888 | 0.801552 | 8.53E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene072888 | 0.806894 | 6.59E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene072888 | 0.823478 | 1.36E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene072888 | 0.83464 | 2.67E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene072888 | 0.80841 | 3.14E-50 | -1.69E-46 |
| MS.gene053107 | MS.gene072888 | 0.810393 | 1.18E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene072888 | 0.864506 | 1.16E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene072888 | 0.847382 | 1.20E-59 | -1.69E-46 |
| MS.gene053557 | MS.gene072888 | 0.887117 | 1.89E-72 | -1.69E-46 |
| MS.gene053836 | MS.gene072888 | 0.896909 | 2.35E-76 | -1.69E-46 |
| MS.gene053907 | MS.gene072888 | 0.869485 | 2.99E-66 | -1.69E-46 |
| MS.gene053928 | MS.gene072888 | 0.810111 | 1.36E-50 | -1.69E-46 |
| MS.gene053971 | MS.gene072888 | 0.841239 | 5.36E-58 | -1.69E-46 |
| MS.gene054011 | MS.gene072888 | 0.809134 | 2.20E-50 | -1.69E-46 |
| MS.gene054012 | MS.gene072888 | 0.80079 | 1.22E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene072888 | 0.863863 | 1.84E-64 | -1.69E-46 |
| MS.gene054214 | MS.gene072888 | 0.803337 | 3.66E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene072888 | 0.862516 | 4.79E-64 | -1.69E-46 |
| MS.gene054473 | MS.gene072888 | 0.821309 | 4.32E-53 | -1.69E-46 |
| MS.gene05455 | MS.gene072888 | 0.852893 | 3.42E-61 | -1.69E-46 |
| MS.gene054802 | MS.gene072888 | 0.829971 | 3.82E-55 | -1.69E-46 |
| MS.gene054803 | MS.gene072888 | 0.829064 | 6.34E-55 | -1.69E-46 |
| MS.gene054804 | MS.gene072888 | 0.829779 | 4.25E-55 | -1.69E-46 |
| MS.gene054930 | MS.gene072888 | 0.804597 | 2.00E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene072888 | 0.808877 | 2.50E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene072888 | 0.832449 | 9.39E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene072888 | 0.850257 | 1.91E-60 | -1.69E-46 |
| MS.gene055254 | MS.gene072888 | 0.827529 | 1.49E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene072888 | 0.926692 | 3.31E-91 | -1.69E-46 |
| MS.gene055390 | MS.gene072888 | 0.88982 | 1.72E-73 | -1.69E-46 |
| MS.gene055397 | MS.gene072888 | 0.81517 | 1.06E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene072888 | 0.840428 | 8.75E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene072888 | 0.915444 | 5.85E-85 | -1.69E-46 |
| MS.gene055428 | MS.gene072888 | 0.906181 | 1.95E-80 | -1.69E-46 |
| MS.gene055499 | MS.gene072888 | 0.818715 | 1.70E-52 | -1.69E-46 |
| MS.gene055533 | MS.gene072888 | 0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene072888 | 0.833406 | 5.43E-56 | -1.69E-46 |
| MS.gene055604 | MS.gene072888 | 0.834491 | 2.91E-56 | -1.69E-46 |
| MS.gene055712 | MS.gene072888 | 0.839303 | 1.72E-57 | -1.69E-46 |
| MS.gene055896 | MS.gene072888 | 0.844897 | 5.69E-59 | -1.69E-46 |
| MS.gene056191 | MS.gene072888 | 0.832697 | 8.15E-56 | -1.69E-46 |
| MS.gene056314 | MS.gene072888 | 0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene072888 | 0.84754 | 1.08E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene072888 | 0.843454 | 1.39E-58 | -1.69E-46 |
| MS.gene056451 | MS.gene072888 | 0.805647 | 1.21E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene072888 | 0.860615 | 1.83E-63 | -1.69E-46 |
| MS.gene056612 | MS.gene072888 | 0.920423 | 1.30E-87 | -1.69E-46 |
| MS.gene056659 | MS.gene072888 | 0.818355 | 2.05E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene072888 | 0.854158 | 1.48E-61 | -1.69E-46 |
| MS.gene056897 | MS.gene072888 | 0.825695 | 4.07E-54 | -1.69E-46 |
| MS.gene056899 | MS.gene072888 | -0.811717 | 6.09E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene072888 | 0.816259 | 6.06E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene072888 | 0.856512 | 3.06E-62 | -1.69E-46 |
| MS.gene05702 | MS.gene072888 | 0.870996 | 9.56E-67 | -1.69E-46 |
| MS.gene057121 | MS.gene072888 | 0.878796 | 2.10E-69 | -1.69E-46 |
| MS.gene057123 | MS.gene072888 | 0.834874 | 2.33E-56 | -1.69E-46 |
| MS.gene057124 | MS.gene072888 | 0.829631 | 4.62E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene072888 | 0.818831 | 1.60E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene072888 | 0.820507 | 6.61E-53 | -1.69E-46 |
| MS.gene057207 | MS.gene072888 | 0.802287 | 6.03E-49 | -1.69E-46 |
| MS.gene057245 | MS.gene072888 | 0.855398 | 6.48E-62 | -1.69E-46 |
| MS.gene057295 | MS.gene072888 | 0.84682 | 1.71E-59 | -1.69E-46 |
| MS.gene05733 | MS.gene072888 | 0.842629 | 2.30E-58 | -1.69E-46 |
| MS.gene057396 | MS.gene072888 | 0.803924 | 2.76E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene072888 | 0.850684 | 1.45E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene072888 | 0.81607 | 6.68E-52 | -1.69E-46 |
| MS.gene057449 | MS.gene072888 | 0.819053 | 1.42E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene072888 | 0.825877 | 3.69E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene072888 | 0.887871 | 9.75E-73 | -1.69E-46 |
| MS.gene058082 | MS.gene072888 | 0.863869 | 1.83E-64 | -1.69E-46 |
| MS.gene05811 | MS.gene072888 | 0.89657 | 3.25E-76 | -1.69E-46 |
| MS.gene058142 | MS.gene072888 | 0.860635 | 1.80E-63 | -1.69E-46 |
| MS.gene058233 | MS.gene072888 | 0.884942 | 1.25E-71 | -1.69E-46 |
| MS.gene058276 | MS.gene072888 | 0.866025 | 3.85E-65 | -1.69E-46 |
| MS.gene058293 | MS.gene072888 | 0.873836 | 1.08E-67 | -1.69E-46 |
| MS.gene058365 | MS.gene072888 | 0.85057 | 1.56E-60 | -1.69E-46 |
| MS.gene05842 | MS.gene072888 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene072888 | 0.917458 | 5.18E-86 | -1.69E-46 |
| MS.gene058749 | MS.gene072888 | 0.815268 | 1.01E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene072888 | 0.843671 | 1.21E-58 | -1.69E-46 |
| MS.gene058845 | MS.gene072888 | 0.868473 | 6.36E-66 | -1.69E-46 |
| MS.gene05886 | MS.gene072888 | 0.813263 | 2.80E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene072888 | 0.835639 | 1.49E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene072888 | 0.886767 | 2.57E-72 | -1.69E-46 |
| MS.gene059285 | MS.gene072888 | 0.805826 | 1.11E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene072888 | 0.827974 | 1.16E-54 | -1.69E-46 |
| MS.gene059326 | MS.gene072888 | 0.845005 | 5.32E-59 | -1.69E-46 |
| MS.gene059342 | MS.gene072888 | 0.844804 | 6.02E-59 | -1.69E-46 |
| MS.gene059420 | MS.gene072888 | 0.800636 | 1.31E-48 | -1.69E-46 |
| MS.gene059518 | MS.gene072888 | 0.896697 | 2.88E-76 | -1.69E-46 |
| MS.gene059536 | MS.gene072888 | 0.854625 | 1.09E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene072888 | 0.887973 | 8.91E-73 | -1.69E-46 |
| MS.gene05959 | MS.gene072888 | 0.875795 | 2.32E-68 | -1.69E-46 |
| MS.gene059676 | MS.gene072888 | 0.872441 | 3.17E-67 | -1.69E-46 |
| MS.gene059688 | MS.gene072888 | 0.87561 | 2.69E-68 | -1.69E-46 |
| MS.gene059692 | MS.gene072888 | 0.885204 | 9.95E-72 | -1.69E-46 |
| MS.gene059695 | MS.gene072888 | 0.881836 | 1.72E-70 | -1.69E-46 |
| MS.gene059708 | MS.gene072888 | 0.857196 | 1.92E-62 | -1.69E-46 |
| MS.gene05984 | MS.gene072888 | 0.881202 | 2.92E-70 | -1.69E-46 |
| MS.gene059894 | MS.gene072888 | 0.92132 | 4.16E-88 | -1.69E-46 |
| MS.gene059899 | MS.gene072888 | 0.851481 | 8.63E-61 | -1.69E-46 |
| MS.gene059960 | MS.gene072888 | 0.854252 | 1.39E-61 | -1.69E-46 |
| MS.gene059974 | MS.gene072888 | 0.802898 | 4.51E-49 | -1.69E-46 |
| MS.gene060005 | MS.gene072888 | 0.805467 | 1.32E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene072888 | 0.853061 | 3.07E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene072888 | 0.814805 | 1.28E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene072888 | 0.846699 | 1.84E-59 | -1.69E-46 |
| MS.gene060476 | MS.gene072888 | 0.82406 | 9.90E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene072888 | 0.834235 | 3.37E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene072888 | 0.819746 | 9.88E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene072888 | 0.849933 | 2.35E-60 | -1.69E-46 |
| MS.gene061049 | MS.gene072888 | 0.909129 | 8.01E-82 | -1.69E-46 |
| MS.gene061051 | MS.gene072888 | -0.855531 | 5.93E-62 | -1.69E-46 |
| MS.gene061112 | MS.gene072888 | 0.814082 | 1.85E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene072888 | 0.812064 | 5.12E-51 | -1.69E-46 |
| MS.gene061159 | MS.gene072888 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene061200 | MS.gene072888 | 0.8197 | 1.01E-52 | -1.69E-46 |
| MS.gene061265 | MS.gene072888 | 0.810099 | 1.36E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067613 | MS.gene072888 | PPI |
| MS.gene48746 | MS.gene072888 | PPI |
| MS.gene48733 | MS.gene072888 | PPI |
| MS.gene44482 | MS.gene072888 | PPI |
| MS.gene48740 | MS.gene072888 | PPI |
| MS.gene072888 | MS.gene88044 | PPI |
| MS.gene88144 | MS.gene072888 | PPI |
| MS.gene35931 | MS.gene072888 | PPI |
| MS.gene20276 | MS.gene072888 | PPI |
| MS.gene043043 | MS.gene072888 | PPI |
| MS.gene35853 | MS.gene072888 | PPI |
| MS.gene072888 | MS.gene015231 | PPI |
| MS.gene35795 | MS.gene072888 | PPI |
| MS.gene072888 | MS.gene45786 | PPI |
| MS.gene32715 | MS.gene072888 | PPI |
| MS.gene043054 | MS.gene072888 | PPI |
| MS.gene57204 | MS.gene072888 | PPI |
| MS.gene80170 | MS.gene072888 | PPI |
| MS.gene09575 | MS.gene072888 | PPI |
| MS.gene029047 | MS.gene072888 | PPI |
| MS.gene014924 | MS.gene072888 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072888.t1 | MTR_3g107060 | 95.312 | 320 | 10 | 2 | 1 | 316 | 2 | 320 | 0.0 | 626 |
| MS.gene072888.t1 | MTR_5g022510 | 37.860 | 243 | 127 | 6 | 82 | 310 | 11 | 243 | 5.26e-42 | 147 |
| MS.gene072888.t1 | MTR_4g073410 | 37.603 | 242 | 127 | 7 | 83 | 310 | 13 | 244 | 5.28e-42 | 147 |
| MS.gene072888.t1 | MTR_4g061140 | 38.983 | 236 | 121 | 7 | 89 | 310 | 20 | 246 | 1.61e-39 | 139 |
| MS.gene072888.t1 | MTR_4g061140 | 38.983 | 236 | 121 | 7 | 89 | 310 | 20 | 246 | 1.62e-39 | 139 |
| MS.gene072888.t1 | MTR_5g022510 | 38.140 | 215 | 110 | 5 | 109 | 310 | 14 | 218 | 1.14e-37 | 135 |
| MS.gene072888.t1 | MTR_4g061140 | 39.070 | 215 | 109 | 6 | 109 | 310 | 7 | 212 | 5.44e-36 | 129 |
| MS.gene072888.t1 | MTR_3g088160 | 35.223 | 247 | 114 | 8 | 104 | 313 | 121 | 358 | 4.38e-32 | 123 |
| MS.gene072888.t1 | MTR_3g088160 | 35.223 | 247 | 114 | 8 | 104 | 313 | 121 | 358 | 7.59e-32 | 123 |
| MS.gene072888.t1 | MTR_3g094650 | 28.102 | 274 | 128 | 10 | 87 | 306 | 43 | 301 | 6.16e-23 | 97.1 |
| MS.gene072888.t1 | MTR_4g095450 | 27.707 | 314 | 163 | 10 | 52 | 312 | 7 | 309 | 2.19e-21 | 92.8 |
| MS.gene072888.t1 | MTR_4g029190 | 28.731 | 268 | 119 | 7 | 87 | 308 | 80 | 321 | 4.73e-21 | 92.4 |
| MS.gene072888.t1 | MTR_6g043240 | 27.445 | 317 | 149 | 11 | 54 | 306 | 11 | 310 | 2.21e-20 | 90.5 |
| MS.gene072888.t1 | MTR_4g029200 | 29.963 | 267 | 142 | 9 | 83 | 308 | 57 | 319 | 4.46e-20 | 89.4 |
| MS.gene072888.t1 | MTR_0155s0040 | 29.286 | 280 | 129 | 10 | 87 | 315 | 42 | 303 | 4.54e-20 | 89.0 |
| MS.gene072888.t1 | MTR_1g077000 | 30.078 | 256 | 110 | 8 | 101 | 306 | 70 | 306 | 1.97e-19 | 87.4 |
| MS.gene072888.t1 | MTR_7g072510 | 28.676 | 272 | 129 | 9 | 88 | 308 | 36 | 293 | 2.15e-19 | 87.0 |
| MS.gene072888.t1 | MTR_7g029030 | 27.068 | 266 | 148 | 6 | 88 | 312 | 45 | 305 | 4.44e-19 | 86.3 |
| MS.gene072888.t1 | MTR_8g062780 | 29.329 | 283 | 120 | 10 | 87 | 306 | 38 | 303 | 5.07e-19 | 86.3 |
| MS.gene072888.t1 | MTR_7g072480 | 29.197 | 274 | 129 | 9 | 88 | 310 | 40 | 299 | 5.58e-19 | 86.3 |
| MS.gene072888.t1 | MTR_4g122640 | 29.304 | 273 | 120 | 10 | 101 | 316 | 69 | 325 | 8.83e-19 | 85.9 |
| MS.gene072888.t1 | MTR_5g022870 | 28.302 | 265 | 120 | 10 | 102 | 310 | 55 | 305 | 1.25e-18 | 85.1 |
| MS.gene072888.t1 | MTR_1g025980 | 30.116 | 259 | 113 | 9 | 102 | 306 | 56 | 300 | 6.11e-18 | 83.2 |
| MS.gene072888.t1 | MTR_4g083710 | 26.909 | 275 | 131 | 8 | 88 | 306 | 43 | 303 | 9.91e-18 | 82.8 |
| MS.gene072888.t1 | MTR_3g466200 | 28.295 | 258 | 117 | 10 | 102 | 306 | 57 | 299 | 1.26e-17 | 82.4 |
| MS.gene072888.t1 | MTR_3g092990 | 28.929 | 280 | 145 | 10 | 81 | 311 | 36 | 310 | 1.61e-17 | 82.0 |
| MS.gene072888.t1 | MTR_5g008440 | 33.721 | 172 | 96 | 5 | 142 | 310 | 25 | 181 | 1.88e-17 | 79.7 |
| MS.gene072888.t1 | MTR_3g072190 | 27.881 | 269 | 123 | 7 | 88 | 306 | 50 | 297 | 2.51e-17 | 81.3 |
| MS.gene072888.t1 | MTR_5g021060 | 27.599 | 279 | 133 | 9 | 87 | 308 | 45 | 311 | 3.06e-17 | 81.3 |
| MS.gene072888.t1 | MTR_2g084110 | 27.574 | 272 | 130 | 11 | 87 | 306 | 40 | 296 | 3.49e-17 | 80.9 |
| MS.gene072888.t1 | MTR_2g084000 | 27.839 | 273 | 129 | 11 | 87 | 306 | 41 | 298 | 3.85e-17 | 80.9 |
| MS.gene072888.t1 | MTR_4g074980 | 28.870 | 239 | 144 | 8 | 88 | 306 | 41 | 273 | 5.12e-17 | 80.1 |
| MS.gene072888.t1 | MTR_4g074980 | 33.750 | 160 | 88 | 5 | 88 | 234 | 41 | 195 | 6.74e-17 | 79.3 |
| MS.gene072888.t1 | MTR_8g075100 | 27.547 | 265 | 122 | 9 | 102 | 310 | 58 | 308 | 1.66e-16 | 79.0 |
| MS.gene072888.t1 | MTR_5g083860 | 26.619 | 278 | 135 | 9 | 83 | 306 | 42 | 304 | 1.74e-16 | 79.0 |
| MS.gene072888.t1 | MTR_4g074990 | 29.204 | 226 | 95 | 8 | 88 | 255 | 40 | 258 | 2.36e-16 | 78.6 |
| MS.gene072888.t1 | MTR_5g016010 | 31.844 | 179 | 94 | 7 | 88 | 250 | 47 | 213 | 2.96e-16 | 78.6 |
| MS.gene072888.t1 | MTR_2g029860 | 25.969 | 258 | 135 | 8 | 104 | 311 | 63 | 314 | 4.10e-16 | 78.2 |
| MS.gene072888.t1 | MTR_0286s0010 | 26.182 | 275 | 138 | 8 | 87 | 306 | 49 | 313 | 5.54e-16 | 77.8 |
| MS.gene072888.t1 | MTR_6g008075 | 26.182 | 275 | 138 | 8 | 87 | 306 | 49 | 313 | 5.54e-16 | 77.8 |
| MS.gene072888.t1 | MTR_8g076820 | 27.715 | 267 | 118 | 9 | 101 | 308 | 61 | 311 | 6.86e-16 | 77.4 |
| MS.gene072888.t1 | MTR_2g084010 | 25.547 | 274 | 134 | 9 | 87 | 306 | 40 | 297 | 8.80e-16 | 77.0 |
| MS.gene072888.t1 | MTR_2g084020 | 25.182 | 274 | 135 | 9 | 87 | 306 | 40 | 297 | 3.28e-15 | 75.5 |
| MS.gene072888.t1 | MTR_3g072190 | 27.679 | 224 | 108 | 4 | 127 | 306 | 17 | 230 | 3.28e-15 | 74.3 |
| MS.gene072888.t1 | MTR_3g467600 | 28.571 | 266 | 112 | 10 | 102 | 308 | 59 | 305 | 4.92e-15 | 75.1 |
| MS.gene072888.t1 | MTR_7g026990 | 27.165 | 254 | 121 | 8 | 102 | 306 | 63 | 301 | 9.87e-15 | 73.9 |
| MS.gene072888.t1 | MTR_5g074860 | 26.562 | 320 | 164 | 14 | 44 | 308 | 3 | 306 | 1.00e-14 | 73.9 |
| MS.gene072888.t1 | MTR_1g022970 | 27.715 | 267 | 119 | 8 | 101 | 308 | 77 | 328 | 1.65e-14 | 73.6 |
| MS.gene072888.t1 | MTR_2g029750 | 26.667 | 255 | 141 | 8 | 102 | 311 | 61 | 314 | 1.68e-14 | 73.6 |
| MS.gene072888.t1 | MTR_1g115900 | 35.211 | 142 | 79 | 4 | 102 | 234 | 59 | 196 | 7.27e-14 | 71.6 |
| MS.gene072888.t1 | MTR_4g030890 | 32.143 | 168 | 90 | 6 | 83 | 234 | 111 | 270 | 1.30e-13 | 71.2 |
| MS.gene072888.t1 | MTR_3g094670 | 28.016 | 257 | 118 | 9 | 102 | 306 | 60 | 301 | 1.31e-13 | 70.9 |
| MS.gene072888.t1 | MTR_5g014100 | 26.740 | 273 | 124 | 8 | 101 | 311 | 57 | 315 | 2.10e-13 | 70.1 |
| MS.gene072888.t1 | MTR_4g125940 | 26.990 | 289 | 123 | 12 | 87 | 308 | 43 | 310 | 3.71e-13 | 69.3 |
| MS.gene072888.t1 | MTR_3g092990 | 28.000 | 275 | 143 | 11 | 81 | 311 | 36 | 299 | 6.10e-13 | 68.6 |
| MS.gene072888.t1 | MTR_4g127670 | 27.306 | 271 | 121 | 9 | 101 | 312 | 55 | 308 | 7.44e-13 | 68.6 |
| MS.gene072888.t1 | MTR_7g093370 | 26.667 | 255 | 136 | 8 | 102 | 308 | 101 | 352 | 7.54e-13 | 68.9 |
| MS.gene072888.t1 | MTR_2g029820 | 26.103 | 272 | 153 | 8 | 87 | 311 | 44 | 314 | 8.54e-13 | 68.6 |
| MS.gene072888.t1 | MTR_4g125940 | 27.106 | 273 | 113 | 10 | 101 | 308 | 4 | 255 | 9.52e-13 | 67.8 |
| MS.gene072888.t1 | MTR_3g466180 | 29.297 | 256 | 118 | 8 | 102 | 308 | 63 | 304 | 1.34e-12 | 67.8 |
| MS.gene072888.t1 | MTR_7g086820 | 25.448 | 279 | 137 | 11 | 87 | 311 | 35 | 296 | 1.94e-12 | 67.4 |
| MS.gene072888.t1 | MTR_4g031140 | 31.902 | 163 | 87 | 6 | 88 | 234 | 44 | 198 | 2.04e-12 | 67.4 |
| MS.gene072888.t1 | MTR_4g114210 | 34.507 | 142 | 78 | 4 | 101 | 234 | 52 | 186 | 5.17e-12 | 65.9 |
| MS.gene072888.t1 | MTR_5g074860 | 26.644 | 289 | 164 | 13 | 44 | 308 | 3 | 267 | 1.13e-11 | 64.7 |
| MS.gene072888.t1 | MTR_2g040000 | 26.766 | 269 | 140 | 11 | 88 | 308 | 53 | 312 | 1.63e-11 | 64.7 |
| MS.gene072888.t1 | MTR_3g094630 | 26.909 | 275 | 132 | 9 | 88 | 308 | 44 | 303 | 1.79e-11 | 64.3 |
| MS.gene072888.t1 | MTR_3g105790 | 24.609 | 256 | 139 | 8 | 104 | 312 | 59 | 307 | 3.47e-11 | 63.5 |
| MS.gene072888.t1 | MTR_2g008160 | 29.960 | 247 | 130 | 10 | 95 | 316 | 49 | 277 | 6.48e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072888.t1 | AT4G32320 | 66.071 | 280 | 85 | 3 | 37 | 316 | 60 | 329 | 8.06e-136 | 388 |
| MS.gene072888.t1 | AT3G09640 | 36.759 | 253 | 125 | 7 | 83 | 310 | 4 | 246 | 2.37e-40 | 142 |
| MS.gene072888.t1 | AT3G09640 | 36.759 | 253 | 125 | 7 | 83 | 310 | 4 | 246 | 2.37e-40 | 142 |
| MS.gene072888.t1 | AT4G35000 | 37.652 | 247 | 130 | 7 | 83 | 315 | 12 | 248 | 2.15e-39 | 140 |
| MS.gene072888.t1 | AT4G35970 | 37.603 | 242 | 126 | 7 | 83 | 310 | 11 | 241 | 2.35e-39 | 140 |
| MS.gene072888.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.55e-39 | 139 |
| MS.gene072888.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene072888.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene072888.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene072888.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene072888.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene072888.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene072888.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene072888.t1 | AT4G35970 | 37.838 | 222 | 113 | 7 | 83 | 290 | 11 | 221 | 1.12e-34 | 126 |
| MS.gene072888.t1 | AT1G77490 | 34.328 | 268 | 128 | 9 | 86 | 314 | 86 | 344 | 3.40e-31 | 121 |
| MS.gene072888.t1 | AT1G77490 | 34.328 | 268 | 128 | 9 | 86 | 314 | 86 | 344 | 3.86e-31 | 121 |
| MS.gene072888.t1 | AT4G08390 | 33.065 | 248 | 120 | 8 | 104 | 314 | 127 | 365 | 4.76e-31 | 120 |
| MS.gene072888.t1 | AT4G08390 | 33.065 | 248 | 120 | 8 | 104 | 314 | 127 | 365 | 4.76e-31 | 120 |
| MS.gene072888.t1 | AT4G08390 | 33.065 | 248 | 120 | 8 | 104 | 314 | 127 | 365 | 4.76e-31 | 120 |
| MS.gene072888.t1 | AT4G08390 | 33.065 | 248 | 120 | 8 | 104 | 314 | 126 | 364 | 4.83e-31 | 120 |
| MS.gene072888.t1 | AT4G08390 | 33.480 | 227 | 121 | 8 | 104 | 314 | 127 | 339 | 1.75e-26 | 107 |
| MS.gene072888.t1 | AT1G14550 | 30.909 | 275 | 122 | 12 | 88 | 308 | 42 | 302 | 4.67e-22 | 94.7 |
| MS.gene072888.t1 | AT4G16270 | 31.939 | 263 | 108 | 9 | 101 | 306 | 81 | 329 | 1.30e-21 | 94.0 |
| MS.gene072888.t1 | AT1G14540 | 27.660 | 282 | 117 | 10 | 88 | 306 | 37 | 294 | 2.11e-20 | 90.1 |
| MS.gene072888.t1 | AT5G47000 | 29.811 | 265 | 124 | 8 | 101 | 314 | 64 | 317 | 1.57e-19 | 87.8 |
| MS.gene072888.t1 | AT5G40150 | 29.259 | 270 | 128 | 9 | 93 | 311 | 55 | 312 | 6.84e-19 | 85.9 |
| MS.gene072888.t1 | AT4G31760 | 29.183 | 257 | 126 | 9 | 104 | 312 | 63 | 311 | 1.75e-18 | 84.7 |
| MS.gene072888.t1 | AT3G28200 | 27.509 | 269 | 135 | 8 | 93 | 312 | 44 | 301 | 1.92e-18 | 84.7 |
| MS.gene072888.t1 | AT5G14130 | 28.975 | 283 | 132 | 8 | 86 | 312 | 46 | 315 | 3.18e-18 | 84.3 |
| MS.gene072888.t1 | AT4G17690 | 30.534 | 262 | 121 | 9 | 101 | 312 | 57 | 307 | 5.52e-18 | 83.6 |
| MS.gene072888.t1 | AT4G33420 | 29.434 | 265 | 118 | 9 | 101 | 315 | 68 | 313 | 6.38e-18 | 83.2 |
| MS.gene072888.t1 | AT4G33420 | 30.196 | 255 | 129 | 9 | 101 | 315 | 115 | 360 | 7.13e-18 | 83.6 |
| MS.gene072888.t1 | AT5G14130 | 28.975 | 283 | 132 | 8 | 86 | 312 | 87 | 356 | 8.57e-18 | 83.6 |
| MS.gene072888.t1 | AT5G58390 | 27.586 | 261 | 115 | 8 | 102 | 306 | 53 | 295 | 2.06e-17 | 81.6 |
| MS.gene072888.t1 | AT4G36430 | 27.820 | 266 | 119 | 8 | 101 | 308 | 61 | 311 | 1.35e-16 | 79.7 |
| MS.gene072888.t1 | AT3G50990 | 28.996 | 269 | 112 | 11 | 101 | 308 | 72 | 322 | 1.65e-16 | 79.3 |
| MS.gene072888.t1 | AT2G24800 | 26.357 | 258 | 133 | 8 | 104 | 312 | 65 | 314 | 3.19e-16 | 78.6 |
| MS.gene072888.t1 | AT1G24110 | 25.949 | 316 | 155 | 10 | 61 | 316 | 15 | 311 | 3.41e-16 | 78.2 |
| MS.gene072888.t1 | AT4G37520 | 29.091 | 275 | 116 | 9 | 103 | 315 | 60 | 317 | 5.00e-16 | 77.8 |
| MS.gene072888.t1 | AT5G42180 | 27.881 | 269 | 155 | 10 | 63 | 310 | 8 | 258 | 6.59e-16 | 77.4 |
| MS.gene072888.t1 | AT4G37530 | 27.241 | 290 | 130 | 10 | 88 | 315 | 47 | 317 | 7.78e-16 | 77.4 |
| MS.gene072888.t1 | AT2G18150 | 27.444 | 266 | 120 | 8 | 101 | 308 | 67 | 317 | 1.65e-15 | 76.6 |
| MS.gene072888.t1 | AT5G05340 | 26.070 | 257 | 123 | 8 | 102 | 306 | 62 | 303 | 4.64e-15 | 75.1 |
| MS.gene072888.t1 | AT3G17070 | 26.894 | 264 | 133 | 11 | 95 | 306 | 63 | 318 | 5.84e-15 | 74.7 |
| MS.gene072888.t1 | AT4G37530 | 32.515 | 163 | 85 | 6 | 88 | 234 | 47 | 200 | 5.90e-15 | 74.3 |
| MS.gene072888.t1 | AT5G19880 | 26.259 | 278 | 110 | 7 | 102 | 308 | 57 | 310 | 9.05e-15 | 74.3 |
| MS.gene072888.t1 | AT2G22420 | 26.493 | 268 | 144 | 8 | 87 | 306 | 38 | 300 | 1.11e-14 | 73.9 |
| MS.gene072888.t1 | AT2G35380 | 27.306 | 271 | 125 | 9 | 101 | 311 | 61 | 319 | 1.41e-14 | 73.9 |
| MS.gene072888.t1 | AT4G37520 | 29.091 | 275 | 113 | 10 | 103 | 315 | 60 | 314 | 4.00e-14 | 72.4 |
| MS.gene072888.t1 | AT1G77100 | 29.150 | 247 | 151 | 11 | 87 | 314 | 39 | 280 | 4.17e-14 | 72.4 |
| MS.gene072888.t1 | AT1G71695 | 25.993 | 277 | 131 | 9 | 87 | 306 | 59 | 318 | 1.35e-13 | 70.9 |
| MS.gene072888.t1 | AT1G05240 | 31.718 | 227 | 116 | 9 | 98 | 298 | 54 | 267 | 2.24e-13 | 70.1 |
| MS.gene072888.t1 | AT1G05250 | 31.718 | 227 | 116 | 9 | 98 | 298 | 54 | 267 | 2.24e-13 | 70.1 |
| MS.gene072888.t1 | AT2G41480 | 34.286 | 140 | 77 | 4 | 103 | 234 | 62 | 194 | 7.13e-13 | 68.6 |
| MS.gene072888.t1 | AT3G21770 | 31.724 | 145 | 81 | 5 | 101 | 234 | 60 | 197 | 1.43e-12 | 67.8 |
| MS.gene072888.t1 | AT3G17070 | 27.854 | 219 | 114 | 9 | 131 | 306 | 38 | 255 | 2.02e-12 | 67.0 |
| MS.gene072888.t1 | AT1G44970 | 27.692 | 260 | 128 | 10 | 101 | 308 | 76 | 327 | 2.81e-12 | 67.0 |
| MS.gene072888.t1 | AT5G67400 | 26.471 | 272 | 121 | 9 | 103 | 312 | 60 | 314 | 9.54e-12 | 65.5 |
| MS.gene072888.t1 | AT4G08780 | 26.692 | 266 | 121 | 10 | 101 | 306 | 55 | 306 | 1.15e-11 | 65.1 |
| MS.gene072888.t1 | AT3G32980 | 34.868 | 152 | 70 | 6 | 101 | 234 | 62 | 202 | 1.51e-11 | 65.1 |
| MS.gene072888.t1 | AT4G08770 | 27.132 | 258 | 130 | 10 | 101 | 306 | 55 | 306 | 2.03e-11 | 64.3 |
| MS.gene072888.t1 | AT1G05260 | 31.677 | 161 | 89 | 6 | 101 | 250 | 57 | 207 | 4.46e-11 | 63.2 |
| MS.gene072888.t1 | AT4G33870 | 30.128 | 156 | 100 | 5 | 87 | 234 | 83 | 237 | 5.38e-11 | 63.5 |
Find 61 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACACATGACGGTTGTAATT+TGG | 0.179181 | 3.2:+87273293 | None:intergenic |
| TTCATATTATAAGGTTCTTT+TGG | 0.228709 | 3.2:-87270384 | MS.gene072888:CDS |
| CGCTCCGACCATGCTTCTTC+AGG | 0.236229 | 3.2:-87273255 | MS.gene072888:intron |
| GAGGAAACTCTTGATGCTTC+TGG | 0.303467 | 3.2:-87270897 | MS.gene072888:CDS |
| CTTTACCTTTGTTAGTATCC+TGG | 0.313796 | 3.2:-87271311 | MS.gene072888:intron |
| GAGAAGCCATGGACGCCTTC+TGG | 0.322202 | 3.2:-87270362 | MS.gene072888:intron |
| ACTCTTGGAAGTAAAGGTTT+TGG | 0.369606 | 3.2:-87270428 | MS.gene072888:CDS |
| CGTATTGTGCAGTGCGCATC+AGG | 0.370162 | 3.2:-87273336 | MS.gene072888:CDS |
| GGCTGCAGGTGTGCTTCGTT+TGG | 0.388465 | 3.2:-87272378 | MS.gene072888:CDS |
| GGAAGTTTCCCTTCAGGATC+AGG | 0.389840 | 3.2:+87270921 | None:intergenic |
| TCCTCGGGAAGTTTCCCTTC+AGG | 0.392970 | 3.2:+87270915 | None:intergenic |
| TATGTCAAGCTGGTGAATTC+TGG | 0.399120 | 3.2:-87269034 | MS.gene072888:CDS |
| TTTGAAATTGATGACAATAC+AGG | 0.426747 | 3.2:-87272335 | MS.gene072888:intron |
| TTTACCTTTGTTAGTATCCT+GGG | 0.437764 | 3.2:-87271310 | MS.gene072888:intron |
| TATGAATTGTCAAAAGAAGT+AGG | 0.453434 | 3.2:+87270401 | None:intergenic |
| TTTCAAAAGTTCCAGCATCA+TGG | 0.457488 | 3.2:+87272351 | None:intergenic |
| TTGTCTGGAGCTCACACTCT+TGG | 0.477240 | 3.2:-87270443 | MS.gene072888:CDS |
| TTGAGGATGATGAATGCTTA+AGG | 0.477644 | 3.2:-87270171 | MS.gene072888:intron |
| CAAGAACTAGTAGCTTTGTC+TGG | 0.485206 | 3.2:-87270458 | MS.gene072888:CDS |
| GCGGACGTTATTGCTGTGGC+TGG | 0.487431 | 3.2:-87271288 | MS.gene072888:CDS |
| CATGACGGTTGTAATTTGGC+GGG | 0.504477 | 3.2:+87273297 | None:intergenic |
| GGGTGCTTACGGCATGGCGT+TGG | 0.513752 | 3.2:+87273049 | None:intergenic |
| TTGAGGAAGGTATTGACAAA+GGG | 0.514007 | 3.2:-87272404 | MS.gene072888:CDS |
| ACATGACGGTTGTAATTTGG+CGG | 0.514760 | 3.2:+87273296 | None:intergenic |
| ATGAATTGTCAAAAGAAGTA+GGG | 0.515097 | 3.2:+87270402 | None:intergenic |
| TTCAGATCACGCACTTGTTG+AGG | 0.515812 | 3.2:-87270188 | MS.gene072888:CDS |
| CCGAGCGAAACTGTGATAGT+AGG | 0.518423 | 3.2:+87271237 | None:intergenic |
| GTTGTTGTAGGTGGTATGAA+TGG | 0.519310 | 3.2:-87271678 | MS.gene072888:intron |
| AGAAGCATCAAGAGTTTCCT+CGG | 0.519712 | 3.2:+87270899 | None:intergenic |
| CTGATGCGCACTGCACAATA+CGG | 0.521753 | 3.2:+87273337 | None:intergenic |
| TTGACAAAGGGAAAGGCTGC+AGG | 0.522171 | 3.2:-87272392 | MS.gene072888:CDS |
| GCTCACACTCTTGGAAGTAA+AGG | 0.522477 | 3.2:-87270434 | MS.gene072888:CDS |
| AGAAGCAAAGATATGAGTGA+GGG | 0.525513 | 3.2:+87273079 | None:intergenic |
| GAGAAGCAAAGATATGAGTG+AGG | 0.527735 | 3.2:+87273078 | None:intergenic |
| GTTGAGGAAGGTATTGACAA+AGG | 0.532606 | 3.2:-87272405 | MS.gene072888:CDS |
| CACAGCAATAACGTCCGCCC+AGG | 0.540378 | 3.2:+87271293 | None:intergenic |
| CAGATAGATGCTATCCATCC+AGG | 0.541954 | 3.2:-87271400 | MS.gene072888:intron |
| ACTTTACCAGAAGGCGTCCA+TGG | 0.549342 | 3.2:+87270356 | None:intergenic |
| CTCACCTGAAGAAGCATGGT+CGG | 0.559728 | 3.2:+87273251 | None:intergenic |
| TCAACAAGTGCGTGATCTGA+AGG | 0.564701 | 3.2:+87270190 | None:intergenic |
| CTTGAAAGACCTGAAAATGC+TGG | 0.570720 | 3.2:-87271639 | MS.gene072888:CDS |
| AGGTTTCAAGTAGTAGCAGT+AGG | 0.580648 | 3.2:-87273148 | MS.gene072888:CDS |
| GGTGGTATGTCGACTATGAT+CGG | 0.580931 | 3.2:-87270217 | MS.gene072888:CDS |
| TTCTAATTAAACAAGAGTTG+AGG | 0.581889 | 3.2:-87272421 | MS.gene072888:CDS |
| GCTGAAGCAGTTGAAGTATG+TGG | 0.592512 | 3.2:-87271264 | MS.gene072888:CDS |
| GAAGCATCAAGAGTTTCCTC+GGG | 0.599360 | 3.2:+87270900 | None:intergenic |
| GAAGCAAAGATATGAGTGAG+GGG | 0.603163 | 3.2:+87273080 | None:intergenic |
| CCTACTATCACAGTTTCGCT+CGG | 0.605954 | 3.2:-87271237 | MS.gene072888:CDS |
| CTCACTCACCTGAAGAAGCA+TGG | 0.606221 | 3.2:+87273247 | None:intergenic |
| AGAGAAAACAAGGACCTGGA+TGG | 0.607635 | 3.2:+87271386 | None:intergenic |
| ATTGTGCAGTGCGCATCAGG+TGG | 0.617666 | 3.2:-87273333 | MS.gene072888:CDS |
| GAAGGTATTGACAAAGGGAA+AGG | 0.621122 | 3.2:-87272399 | MS.gene072888:CDS |
| TGAGTGAGGGGAAGAAGACA+TGG | 0.622960 | 3.2:+87273092 | None:intergenic |
| AATTAAACAAGAGTTGAGGA+AGG | 0.623996 | 3.2:-87272417 | MS.gene072888:CDS |
| CTGGGCGGACGTTATTGCTG+TGG | 0.636998 | 3.2:-87271292 | MS.gene072888:CDS |
| AAGTAGTAGCAGTAGGAGAG+CGG | 0.646507 | 3.2:-87273141 | MS.gene072888:CDS |
| TGGTGAATTCTGGTGTGAAG+TGG | 0.657138 | 3.2:-87269024 | MS.gene072888:CDS |
| TTAACAGTTGACACACATGA+CGG | 0.670912 | 3.2:+87273282 | None:intergenic |
| TCCTGAAGGGAAACTTCCCG+AGG | 0.679146 | 3.2:-87270916 | MS.gene072888:CDS |
| GAAGCAGTTGAAGTATGTGG+AGG | 0.696962 | 3.2:-87271261 | MS.gene072888:CDS |
| ACCTTTGTTAGTATCCTGGG+CGG | 0.708491 | 3.2:-87271307 | MS.gene072888:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATGAATGAAAATATTAT+AGG | + | chr3.2:87271414-87271433 | None:intergenic | 10.0% |
| !! | AATTCATTAAATCTATATTA+AGG | - | chr3.2:87269360-87269379 | MS.gene072888:intron | 10.0% |
| !!! | AATATTTTCATTCATATTAA+TGG | - | chr3.2:87271416-87271435 | MS.gene072888:CDS | 10.0% |
| !!! | TTTTTTTACTTTCTTTTATT+GGG | - | chr3.2:87269780-87269799 | MS.gene072888:intron | 10.0% |
| !!! | TTTTTTTTACTTTCTTTTAT+TGG | - | chr3.2:87269779-87269798 | MS.gene072888:intron | 10.0% |
| !! | TAGATTTAATGAATTAATAC+AGG | + | chr3.2:87269355-87269374 | None:intergenic | 15.0% |
| !! | TTCAGTAAAAAAAATCAAAA+CGG | + | chr3.2:87270270-87270289 | None:intergenic | 15.0% |
| !!! | AAAGGTAAAGTAAATTTTAT+TGG | + | chr3.2:87271048-87271067 | None:intergenic | 15.0% |
| !!! | ATTTTAAATTTCAACTAGAA+CGG | + | chr3.2:87272574-87272593 | None:intergenic | 15.0% |
| !!! | GATATTTTTTTATGTTTTCT+TGG | - | chr3.2:87270556-87270575 | MS.gene072888:intron | 15.0% |
| !!! | TAAGGAATTTTTTTTTTTGA+AGG | + | chr3.2:87272639-87272658 | None:intergenic | 15.0% |
| !!! | TCATAACTTTTTTTTTTAAG+AGG | + | chr3.2:87271590-87271609 | None:intergenic | 15.0% |
| !!! | TTTTGACAATTCATATTATA+AGG | - | chr3.2:87271976-87271995 | MS.gene072888:intron | 15.0% |
| !!! | TTTTTTACTTTCTTTTATTG+GGG | - | chr3.2:87269781-87269800 | MS.gene072888:intron | 15.0% |
| !! | AACAAGCTAATAAATATGAT+AGG | + | chr3.2:87272070-87272089 | None:intergenic | 20.0% |
| !! | AACAATTGAAAACAATACTT+TGG | - | chr3.2:87272393-87272412 | MS.gene072888:CDS | 20.0% |
| !! | AATGAAAATATTATAGGCAA+AGG | + | chr3.2:87271408-87271427 | None:intergenic | 20.0% |
| !! | ACATAAAAAAATGAATCCTA+AGG | + | chr3.2:87273081-87273100 | None:intergenic | 20.0% |
| !! | AGCTCAAATAAAACAATTTA+AGG | + | chr3.2:87269564-87269583 | None:intergenic | 20.0% |
| !! | ATTAGTGATTAATTACTTCT+TGG | - | chr3.2:87272467-87272486 | MS.gene072888:intron | 20.0% |
| !! | TAATGAATTAATACAGGAAT+GGG | + | chr3.2:87269349-87269368 | None:intergenic | 20.0% |
| !! | TATTCAAGTAATAAACGTAA+AGG | + | chr3.2:87270814-87270833 | None:intergenic | 20.0% |
| !! | TCATTCATATTAATGGTATA+GGG | - | chr3.2:87271423-87271442 | MS.gene072888:CDS | 20.0% |
| !! | TCTGAGCAAAAAAAATAAAT+TGG | - | chr3.2:87270524-87270543 | MS.gene072888:intron | 20.0% |
| !! | TTAATGAATTAATACAGGAA+TGG | + | chr3.2:87269350-87269369 | None:intergenic | 20.0% |
| !! | TTCATGTAGATTTAATTCAT+GGG | - | chr3.2:87271354-87271373 | MS.gene072888:intron | 20.0% |
| !! | TTCATTCATATTAATGGTAT+AGG | - | chr3.2:87271422-87271441 | MS.gene072888:CDS | 20.0% |
| !!! | AACTTTATTTATTGAACAGA+TGG | - | chr3.2:87273258-87273277 | MS.gene072888:CDS | 20.0% |
| !!! | GTTGAATATTATTCAGTTTT+AGG | - | chr3.2:87270205-87270224 | MS.gene072888:CDS | 20.0% |
| !!! | TTCATATTATAAGGTTCTTT+TGG | - | chr3.2:87271985-87272004 | MS.gene072888:intron | 20.0% |
| !!! | TTTTAAATTTCAACTAGAAC+GGG | + | chr3.2:87272573-87272592 | None:intergenic | 20.0% |
| !!! | TTTTATAGAAAGAATATTCG+CGG | + | chr3.2:87271642-87271661 | None:intergenic | 20.0% |
| ! | AAAAAAAATCAAAACGGTAC+TGG | + | chr3.2:87270264-87270283 | None:intergenic | 25.0% |
| ! | AACACAAATGCAAAGTAAAT+GGG | + | chr3.2:87271549-87271568 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAATAGTTGA+TGG | + | chr3.2:87269643-87269662 | None:intergenic | 25.0% |
| ! | AATCTATATTAAGGCCTATT+TGG | - | chr3.2:87269369-87269388 | MS.gene072888:intron | 25.0% |
| ! | AATCTATCCTAAAGAGTTTA+TGG | + | chr3.2:87269667-87269686 | None:intergenic | 25.0% |
| ! | AATTTACACTAATGATGTAG+AGG | - | chr3.2:87269201-87269220 | MS.gene072888:intron | 25.0% |
| ! | AATTTCTTGATCACCTAATT+TGG | - | chr3.2:87270320-87270339 | MS.gene072888:intron | 25.0% |
| ! | ATCAAGAAATTCAAAAAGTC+TGG | + | chr3.2:87270856-87270875 | None:intergenic | 25.0% |
| ! | ATGAATTGTCAAAAGAAGTA+GGG | + | chr3.2:87271970-87271989 | None:intergenic | 25.0% |
| ! | ATGTGCTAATATTTGTCATT+GGG | - | chr3.2:87271809-87271828 | MS.gene072888:intron | 25.0% |
| ! | ATTCATATTAATGGTATAGG+GGG | - | chr3.2:87271425-87271444 | MS.gene072888:intron | 25.0% |
| ! | CATTCATATTAATGGTATAG+GGG | - | chr3.2:87271424-87271443 | MS.gene072888:CDS | 25.0% |
| ! | CTTATTTCCATAAACTCTTT+AGG | - | chr3.2:87269657-87269676 | MS.gene072888:intron | 25.0% |
| ! | CTTCATGTAGATTTAATTCA+TGG | - | chr3.2:87271353-87271372 | MS.gene072888:intron | 25.0% |
| ! | GAAATCTGAATCTTGTATAA+AGG | - | chr3.2:87270140-87270159 | MS.gene072888:intron | 25.0% |
| ! | TAACACAAATGCAAAGTAAA+TGG | + | chr3.2:87271550-87271569 | None:intergenic | 25.0% |
| ! | TATGAATTGTCAAAAGAAGT+AGG | + | chr3.2:87271971-87271990 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATCCAAAT+AGG | + | chr3.2:87269386-87269405 | None:intergenic | 25.0% |
| ! | TCACAAAAAATAAATGCAGT+GGG | + | chr3.2:87272273-87272292 | None:intergenic | 25.0% |
| ! | TGTGAAAGAAAAGTTTCAAA+TGG | + | chr3.2:87271886-87271905 | None:intergenic | 25.0% |
| ! | TTAGTCATTTACTACATAAG+AGG | + | chr3.2:87273143-87273162 | None:intergenic | 25.0% |
| ! | TTCACAAAAAATAAATGCAG+TGG | + | chr3.2:87272274-87272293 | None:intergenic | 25.0% |
| ! | TTCTAATTAAACAAGAGTTG+AGG | - | chr3.2:87269948-87269967 | MS.gene072888:intron | 25.0% |
| !! | AATATATAAAAGGAGCATAC+AGG | - | chr3.2:87272764-87272783 | MS.gene072888:intron | 25.0% |
| !! | ATATATAAAAGGAGCATACA+GGG | - | chr3.2:87272765-87272784 | MS.gene072888:intron | 25.0% |
| !! | ATGTCAGTTTTCAAATAGTA+AGG | - | chr3.2:87272592-87272611 | MS.gene072888:intron | 25.0% |
| !! | TTTGAAATTGATGACAATAC+AGG | - | chr3.2:87270034-87270053 | MS.gene072888:intron | 25.0% |
| !!! | AAACTCTTTAGGATAGATTA+AGG | - | chr3.2:87269668-87269687 | MS.gene072888:intron | 25.0% |
| !!! | ATGGTATTTTAGAAATGTAG+AGG | + | chr3.2:87272901-87272920 | None:intergenic | 25.0% |
| !!! | GGAATTTTTTTTTTTGAAGG+AGG | + | chr3.2:87272636-87272655 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAAGTTATCT+TGG | + | chr3.2:87269480-87269499 | None:intergenic | 25.0% |
| !!! | TATTTTAGAAATGTAGAGGT+GGG | + | chr3.2:87272897-87272916 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGAAGGAGGTTA+AGG | + | chr3.2:87272630-87272649 | None:intergenic | 25.0% |
| AATAAAATACCCGTGTTGAA+AGG | - | chr3.2:87270167-87270186 | MS.gene072888:intron | 30.0% | |
| AATAAACGTAAAGGAGAAGA+AGG | + | chr3.2:87270805-87270824 | None:intergenic | 30.0% | |
| AATTAAACAAGAGTTGAGGA+AGG | - | chr3.2:87269952-87269971 | MS.gene072888:intron | 30.0% | |
| AATTAATACAGGAATGGGAT+TGG | + | chr3.2:87269344-87269363 | None:intergenic | 30.0% | |
| ACAAATTACCAGAGAAAACA+AGG | + | chr3.2:87270996-87271015 | None:intergenic | 30.0% | |
| ACATCTGAAAAAATGTTGAG+GGG | - | chr3.2:87273012-87273031 | MS.gene072888:intron | 30.0% | |
| ACTAGGATCTCAATTCAAAA+AGG | - | chr3.2:87272304-87272323 | MS.gene072888:intron | 30.0% | |
| ATAAACGTAAAGGAGAAGAA+GGG | + | chr3.2:87270804-87270823 | None:intergenic | 30.0% | |
| ATAGCAAGTGTTTATGCTAA+TGG | + | chr3.2:87269590-87269609 | None:intergenic | 30.0% | |
| ATAGTTTCATCACAAGTAAC+AGG | - | chr3.2:87270581-87270600 | MS.gene072888:intron | 30.0% | |
| ATATAAAATCAGGTTTACCG+TGG | + | chr3.2:87270382-87270401 | None:intergenic | 30.0% | |
| ATGCATGAGCAAAATTATTC+TGG | + | chr3.2:87271857-87271876 | None:intergenic | 30.0% | |
| ATTAATACAGGAATGGGATT+GGG | + | chr3.2:87269343-87269362 | None:intergenic | 30.0% | |
| ATTCCTTAACCAAATAGTGA+TGG | - | chr3.2:87272651-87272670 | MS.gene072888:intron | 30.0% | |
| CAACTTGGCAATATAAAATC+AGG | + | chr3.2:87270392-87270411 | None:intergenic | 30.0% | |
| CAAGATTCAGATTTCTTCAT+CGG | + | chr3.2:87270135-87270154 | None:intergenic | 30.0% | |
| CAATGACAAATATTAGCACA+TGG | + | chr3.2:87271810-87271829 | None:intergenic | 30.0% | |
| CACAAAAAATAAATGCAGTG+GGG | + | chr3.2:87272272-87272291 | None:intergenic | 30.0% | |
| CATAGACATTACATACAACT+TGG | + | chr3.2:87270407-87270426 | None:intergenic | 30.0% | |
| CATGTGCTAATATTTGTCAT+TGG | - | chr3.2:87271808-87271827 | MS.gene072888:intron | 30.0% | |
| GTCTATGTCTATTATCAATG+TGG | - | chr3.2:87270420-87270439 | MS.gene072888:CDS | 30.0% | |
| TAATATCAGTCCTTTCAACA+CGG | + | chr3.2:87270180-87270199 | None:intergenic | 30.0% | |
| TAGGTGATCAAGAAATTAAG+CGG | + | chr3.2:87270317-87270336 | None:intergenic | 30.0% | |
| TGCTTGTCATATCCTATATA+CGG | + | chr3.2:87271202-87271221 | None:intergenic | 30.0% | |
| TGGTCTGAAAAAATCAGTAA+AGG | - | chr3.2:87270750-87270769 | MS.gene072888:intron | 30.0% | |
| TGTGTGTATTACTATTGGAT+TGG | - | chr3.2:87269807-87269826 | MS.gene072888:intron | 30.0% | |
| TTGTACTATGTAAAACTCCA+CGG | - | chr3.2:87270362-87270381 | MS.gene072888:intron | 30.0% | |
| TTGTCTGTTTATGTTGTTGT+AGG | - | chr3.2:87270679-87270698 | MS.gene072888:intron | 30.0% | |
| TTGTTCTTTATACAACAGCA+TGG | + | chr3.2:87271310-87271329 | None:intergenic | 30.0% | |
| TTTACCTTTGTTAGTATCCT+GGG | - | chr3.2:87271059-87271078 | MS.gene072888:intron | 30.0% | |
| ! | ACTACATAAGAGGTTCTTTT+AGG | + | chr3.2:87273133-87273152 | None:intergenic | 30.0% |
| ! | AGAAGATATTCTTTTGTACC+TGG | + | chr3.2:87269932-87269951 | None:intergenic | 30.0% |
| ! | GAGTTTTACATAGTACAACA+GGG | + | chr3.2:87270360-87270379 | None:intergenic | 30.0% |
| ! | GGAGGTTAAGGAAATTTTTA+TGG | + | chr3.2:87272618-87272637 | None:intergenic | 30.0% |
| ! | GGATTTATCACATGTTGTTT+AGG | - | chr3.2:87270926-87270945 | MS.gene072888:CDS | 30.0% |
| ! | TACTATTGGATTGGATTAGA+GGG | - | chr3.2:87269816-87269835 | MS.gene072888:intron | 30.0% |
| ! | TTACTATTGGATTGGATTAG+AGG | - | chr3.2:87269815-87269834 | MS.gene072888:intron | 30.0% |
| ! | TTTACTTCTGAAAACGTGTA+TGG | + | chr3.2:87272920-87272939 | None:intergenic | 30.0% |
| !! | ATTTTAGAAATGTAGAGGTG+GGG | + | chr3.2:87272896-87272915 | None:intergenic | 30.0% |
| !! | GAAGCTGTTTCTTTCTAAAA+TGG | + | chr3.2:87271337-87271356 | None:intergenic | 30.0% |
| !! | GTATTTTAGAAATGTAGAGG+TGG | + | chr3.2:87272898-87272917 | None:intergenic | 30.0% |
| !!! | CATCTTATATTTTAATCGCC+AGG | - | chr3.2:87270885-87270904 | MS.gene072888:CDS | 30.0% |
| !!! | CATGTCATAAGCTGTTTTTA+TGG | + | chr3.2:87269421-87269440 | None:intergenic | 30.0% |
| !!! | GAAAGTTTTAAAATGCTCAC+AGG | - | chr3.2:87273039-87273058 | MS.gene072888:intron | 30.0% |
| AAAATGCATACCCTGGTTAA+AGG | - | chr3.2:87272860-87272879 | MS.gene072888:intron | 35.0% | |
| AAGAGATGCTTCCAGAAAAA+AGG | - | chr3.2:87271499-87271518 | MS.gene072888:intron | 35.0% | |
| AATATCAGTCCTTTCAACAC+GGG | + | chr3.2:87270179-87270198 | None:intergenic | 35.0% | |
| ACAGGGAAAATTACAGAGTT+GGG | - | chr3.2:87272782-87272801 | MS.gene072888:intron | 35.0% | |
| ACCAGACAATCATCAACTTA+CGG | + | chr3.2:87271171-87271190 | None:intergenic | 35.0% | |
| ACGACTCTCATGTTAAGTTA+TGG | + | chr3.2:87271685-87271704 | None:intergenic | 35.0% | |
| AGAAGCAAAGATATGAGTGA+GGG | + | chr3.2:87269293-87269312 | None:intergenic | 35.0% | |
| AGTTAAAACCAGAGCAACAA+AGG | - | chr3.2:87271750-87271769 | MS.gene072888:intron | 35.0% | |
| AGTTATGGATGATCAGCAAT+TGG | + | chr3.2:87271670-87271689 | None:intergenic | 35.0% | |
| ATCCATATAAGCAAACAACG+AGG | - | chr3.2:87273105-87273124 | MS.gene072888:CDS | 35.0% | |
| ATCCTTAGGAGAAAAGATAG+CGG | + | chr3.2:87271226-87271245 | None:intergenic | 35.0% | |
| ATGTAATTCAAGCGTTTGCT+CGG | - | chr3.2:87270468-87270487 | MS.gene072888:intron | 35.0% | |
| CAAAGGTGAACATTGGTATT+GGG | + | chr3.2:87272823-87272842 | None:intergenic | 35.0% | |
| CAGCTTATGACATGTTCATT+AGG | - | chr3.2:87269427-87269446 | MS.gene072888:intron | 35.0% | |
| CATGGACATAACTCAAAAGT+AGG | + | chr3.2:87271292-87271311 | None:intergenic | 35.0% | |
| CTCGTAAGTAATGCAAATTG+AGG | + | chr3.2:87273238-87273257 | None:intergenic | 35.0% | |
| CTGTATAAAAGAGAACCAGT+GGG | + | chr3.2:87272133-87272152 | None:intergenic | 35.0% | |
| CTTCATAATGCGTAAAAGCA+AGG | + | chr3.2:87269908-87269927 | None:intergenic | 35.0% | |
| CTTTACCTTTGTTAGTATCC+TGG | - | chr3.2:87271058-87271077 | MS.gene072888:intron | 35.0% | |
| CTTTGCATTTGTGTTATGCA+TGG | - | chr3.2:87271554-87271573 | MS.gene072888:intron | 35.0% | |
| GCATGTGACAATTAATATCC+CGG | - | chr3.2:87273175-87273194 | MS.gene072888:intron | 35.0% | |
| GGCATTGTGTGTATTACTAT+TGG | - | chr3.2:87269802-87269821 | MS.gene072888:intron | 35.0% | |
| GGGTCAAACACATACAATAT+GGG | - | chr3.2:87272693-87272712 | MS.gene072888:intron | 35.0% | |
| GGTCAAACACATACAATATG+GGG | - | chr3.2:87272694-87272713 | MS.gene072888:intron | 35.0% | |
| GTTCCATCACTATTTGGTTA+AGG | + | chr3.2:87272657-87272676 | None:intergenic | 35.0% | |
| TAAACGTAAAGGAGAAGAAG+GGG | + | chr3.2:87270803-87270822 | None:intergenic | 35.0% | |
| TACAGGGAAAATTACAGAGT+TGG | - | chr3.2:87272781-87272800 | MS.gene072888:intron | 35.0% | |
| TCTGTTTATGTTGTTGTAGG+TGG | - | chr3.2:87270682-87270701 | MS.gene072888:intron | 35.0% | |
| TGTATGGGTAAATTTGCACA+AGG | - | chr3.2:87270501-87270520 | MS.gene072888:intron | 35.0% | |
| TTAACAGTTGACACACATGA+CGG | + | chr3.2:87269090-87269109 | None:intergenic | 35.0% | |
| TTGAGGATGATGAATGCTTA+AGG | - | chr3.2:87272198-87272217 | MS.gene072888:intron | 35.0% | |
| TTTCAAAAGTTCCAGCATCA+TGG | + | chr3.2:87270021-87270040 | None:intergenic | 35.0% | |
| ! | ACTCTTGGAAGTAAAGGTTT+TGG | - | chr3.2:87271941-87271960 | MS.gene072888:intron | 35.0% |
| ! | AGCGCTTCATTCTAAAGAAA+TGG | - | chr3.2:87269739-87269758 | MS.gene072888:intron | 35.0% |
| ! | GGAGTTTTACATAGTACAAC+AGG | + | chr3.2:87270361-87270380 | None:intergenic | 35.0% |
| ! | GTGTTATGCATGGATGATTT+TGG | - | chr3.2:87271564-87271583 | MS.gene072888:intron | 35.0% |
| ! | TTTTACGCATTATGAAGACC+AGG | - | chr3.2:87269911-87269930 | MS.gene072888:intron | 35.0% |
| !! | ACTTGTTGTTTGTCATCCTT+AGG | + | chr3.2:87271240-87271259 | None:intergenic | 35.0% |
| !! | TGAGTTGTTACTTTACCAGA+AGG | + | chr3.2:87272025-87272044 | None:intergenic | 35.0% |
| !! | TTGAGGAAGGTATTGACAAA+GGG | - | chr3.2:87269965-87269984 | MS.gene072888:intron | 35.0% |
| !! | TTTCTGGTTCCATCACTATT+TGG | + | chr3.2:87272663-87272682 | None:intergenic | 35.0% |
| !! | TTTTTCAGACCAGCATTTTC+AGG | + | chr3.2:87270742-87270761 | None:intergenic | 35.0% |
| !!! | CTCACGAAAAACCTTTTTTC+TGG | + | chr3.2:87271513-87271532 | None:intergenic | 35.0% |
| !!! | TGTTGCTCTGGTTTTAACTT+AGG | + | chr3.2:87271749-87271768 | None:intergenic | 35.0% |
| AAAACACTACCCAGCAGATT+TGG | + | chr3.2:87269162-87269181 | None:intergenic | 40.0% | |
| AAACAGATACTCCAGACACA+AGG | + | chr3.2:87272515-87272534 | None:intergenic | 40.0% | |
| AAATGCTCACAGGTGTTTGT+TGG | - | chr3.2:87273049-87273068 | MS.gene072888:intron | 40.0% | |
| AAATTTGCCGCCTTTAACCA+GGG | + | chr3.2:87272873-87272892 | None:intergenic | 40.0% | |
| AATGCTCACAGGTGTTTGTT+GGG | - | chr3.2:87273050-87273069 | MS.gene072888:intron | 40.0% | |
| ACAATTAATATCCCGGTGCA+CGG | - | chr3.2:87273182-87273201 | MS.gene072888:intron | 40.0% | |
| ACATGACGGTTGTAATTTGG+CGG | + | chr3.2:87269076-87269095 | None:intergenic | 40.0% | |
| CAAAAACGTGTATGTCAAGC+TGG | - | chr3.2:87273325-87273344 | MS.gene072888:CDS | 40.0% | |
| CAAGGGAAATGCAAATGCAA+AGG | + | chr3.2:87272840-87272859 | None:intergenic | 40.0% | |
| CACACATGACGGTTGTAATT+TGG | + | chr3.2:87269079-87269098 | None:intergenic | 40.0% | |
| CACCTCGTTGTTTGCTTATA+TGG | + | chr3.2:87273110-87273129 | None:intergenic | 40.0% | |
| CATGTGCTTGATGCCAAATT+AGG | + | chr3.2:87270336-87270355 | None:intergenic | 40.0% | |
| CCTGTATAAAAGAGAACCAG+TGG | + | chr3.2:87272134-87272153 | None:intergenic | 40.0% | |
| CTAATTTGGCATCAAGCACA+TGG | - | chr3.2:87270334-87270353 | MS.gene072888:intron | 40.0% | |
| CTTGAAAGACCTGAAAATGC+TGG | - | chr3.2:87270730-87270749 | MS.gene072888:intron | 40.0% | |
| GAAGCAAAGATATGAGTGAG+GGG | + | chr3.2:87269292-87269311 | None:intergenic | 40.0% | |
| GAGAAGCAAAGATATGAGTG+AGG | + | chr3.2:87269294-87269313 | None:intergenic | 40.0% | |
| GCAAAGGTGAACATTGGTAT+TGG | + | chr3.2:87272824-87272843 | None:intergenic | 40.0% | |
| GCAAATGCAAAGGTGAACAT+TGG | + | chr3.2:87272830-87272849 | None:intergenic | 40.0% | |
| GCTATAATTGACATGCTCGT+TGG | - | chr3.2:87269869-87269888 | MS.gene072888:intron | 40.0% | |
| GGGGTCAAACACATACAATA+TGG | - | chr3.2:87272692-87272711 | MS.gene072888:intron | 40.0% | |
| GTTAGTAAGTTCCTTGTGTC+TGG | - | chr3.2:87272501-87272520 | MS.gene072888:intron | 40.0% | |
| GTTGTTGTAGGTGGTATGAA+TGG | - | chr3.2:87270691-87270710 | MS.gene072888:intron | 40.0% | |
| TAAAACCAGAGCAACAAAGG+AGG | - | chr3.2:87271753-87271772 | MS.gene072888:intron | 40.0% | |
| TATGTCAAGCTGGTGAATTC+TGG | - | chr3.2:87273335-87273354 | MS.gene072888:CDS | 40.0% | |
| TGAAAAAATGTTGAGGGGCA+TGG | - | chr3.2:87273017-87273036 | MS.gene072888:intron | 40.0% | |
| TGGTACTCTAGTCCGTATAT+AGG | - | chr3.2:87271187-87271206 | MS.gene072888:intron | 40.0% | |
| ! | AACCAGGGTATGCATTTTCA+AGG | + | chr3.2:87272858-87272877 | None:intergenic | 40.0% |
| ! | AACCGCTATCTTTTCTCCTA+AGG | - | chr3.2:87271221-87271240 | MS.gene072888:intron | 40.0% |
| ! | ACAGGTATACATCTAGCTCA+GGG | - | chr3.2:87270052-87270071 | MS.gene072888:intron | 40.0% |
| ! | ACCAGGGTATGCATTTTCAA+GGG | + | chr3.2:87272857-87272876 | None:intergenic | 40.0% |
| ! | AGGTTTCAAGTAGTAGCAGT+AGG | - | chr3.2:87269221-87269240 | MS.gene072888:intron | 40.0% |
| ! | ATTTTCCTCCTTTGTTGCTC+TGG | + | chr3.2:87271761-87271780 | None:intergenic | 40.0% |
| ! | GTGAACATTGGTATTGGGTA+TGG | + | chr3.2:87272818-87272837 | None:intergenic | 40.0% |
| ! | TACAGGTATACATCTAGCTC+AGG | - | chr3.2:87270051-87270070 | MS.gene072888:intron | 40.0% |
| ! | TCTAGATGCCATAGTTTGTC+TGG | - | chr3.2:87272942-87272961 | MS.gene072888:intron | 40.0% |
| !! | ACCGTAAGTTGATGATTGTC+TGG | - | chr3.2:87271167-87271186 | MS.gene072888:intron | 40.0% |
| !! | AGAAGCATCAAGAGTTTCCT+CGG | + | chr3.2:87271473-87271492 | None:intergenic | 40.0% |
| !! | CAAGAACTAGTAGCTTTGTC+TGG | - | chr3.2:87271911-87271930 | MS.gene072888:intron | 40.0% |
| !! | CTGGTTCTCTTTTATACAGG+TGG | - | chr3.2:87272134-87272153 | MS.gene072888:intron | 40.0% |
| !! | GAAGGTATTGACAAAGGGAA+AGG | - | chr3.2:87269970-87269989 | MS.gene072888:intron | 40.0% |
| !! | GTTGAGGAAGGTATTGACAA+AGG | - | chr3.2:87269964-87269983 | MS.gene072888:intron | 40.0% |
| !!! | CCACTGGTTCTCTTTTATAC+AGG | - | chr3.2:87272131-87272150 | MS.gene072888:intron | 40.0% |
| !!! | TTTTTTTCACTCTCACCCAC+TGG | - | chr3.2:87272115-87272134 | MS.gene072888:intron | 40.0% |
| AAGTAGTAGCAGTAGGAGAG+CGG | - | chr3.2:87269228-87269247 | MS.gene072888:intron | 45.0% | |
| ACCTTTGTTAGTATCCTGGG+CGG | - | chr3.2:87271062-87271081 | MS.gene072888:intron | 45.0% | |
| AGAGAAAACAAGGACCTGGA+TGG | + | chr3.2:87270986-87271005 | None:intergenic | 45.0% | |
| ATGCATACCCTGGTTAAAGG+CGG | - | chr3.2:87272863-87272882 | MS.gene072888:intron | 45.0% | |
| CAGATAGATGCTATCCATCC+AGG | - | chr3.2:87270969-87270988 | MS.gene072888:intron | 45.0% | |
| CATGACGGTTGTAATTTGGC+GGG | + | chr3.2:87269075-87269094 | None:intergenic | 45.0% | |
| CCTACTATCACAGTTTCGCT+CGG | - | chr3.2:87271132-87271151 | MS.gene072888:intron | 45.0% | |
| CTCGGCAATTGCATCTGTAT+GGG | - | chr3.2:87270486-87270505 | MS.gene072888:intron | 45.0% | |
| CTTGTACCTCCAAATCTGCT+GGG | - | chr3.2:87269150-87269169 | MS.gene072888:intron | 45.0% | |
| GAAATTTGCCGCCTTTAACC+AGG | + | chr3.2:87272874-87272893 | None:intergenic | 45.0% | |
| GAAGCAGTTGAAGTATGTGG+AGG | - | chr3.2:87271108-87271127 | MS.gene072888:intron | 45.0% | |
| GAGGAAACTCTTGATGCTTC+TGG | - | chr3.2:87271472-87271491 | MS.gene072888:intron | 45.0% | |
| GCACACTTCCAGACAAACTA+TGG | + | chr3.2:87272953-87272972 | None:intergenic | 45.0% | |
| GCTCACACTCTTGGAAGTAA+AGG | - | chr3.2:87271935-87271954 | MS.gene072888:intron | 45.0% | |
| GCTGAAGCAGTTGAAGTATG+TGG | - | chr3.2:87271105-87271124 | MS.gene072888:intron | 45.0% | |
| TACCAGAGAAAACAAGGACC+TGG | + | chr3.2:87270990-87271009 | None:intergenic | 45.0% | |
| TCAACAAGTGCGTGATCTGA+AGG | + | chr3.2:87272182-87272201 | None:intergenic | 45.0% | |
| TCCCTTGAAAATGCATACCC+TGG | - | chr3.2:87272853-87272872 | MS.gene072888:intron | 45.0% | |
| TGGTGAATTCTGGTGTGAAG+TGG | - | chr3.2:87273345-87273364 | MS.gene072888:CDS | 45.0% | |
| TTGTGAAGCAGTCAAGCACT+AGG | - | chr3.2:87272287-87272306 | MS.gene072888:intron | 45.0% | |
| ! | CAGGTATACATCTAGCTCAG+GGG | - | chr3.2:87270053-87270072 | MS.gene072888:intron | 45.0% |
| ! | GAAGCATCAAGAGTTTCCTC+GGG | + | chr3.2:87271472-87271491 | None:intergenic | 45.0% |
| ! | GGTGGTATGTCGACTATGAT+CGG | - | chr3.2:87272152-87272171 | MS.gene072888:intron | 45.0% |
| ! | TCTTCATCGGTTGACTTTGC+TGG | + | chr3.2:87270122-87270141 | None:intergenic | 45.0% |
| ! | TGTTTGTTGGGCTTAGCCTT+AGG | - | chr3.2:87273062-87273081 | MS.gene072888:CDS | 45.0% |
| ! | TTCAGATCACGCACTTGTTG+AGG | - | chr3.2:87272181-87272200 | MS.gene072888:intron | 45.0% |
| !! | AAAACGGTACTGGCAGTATG+TGG | + | chr3.2:87270254-87270273 | None:intergenic | 45.0% |
| !! | AGGTTCTTTTGGAGAAGCCA+TGG | - | chr3.2:87271996-87272015 | MS.gene072888:intron | 45.0% |
| !!! | ATCCAGGTCCTTGTTTTCTC+TGG | - | chr3.2:87270985-87271004 | MS.gene072888:intron | 45.0% |
| !!! | CGTTTGGTTTTCCATGATGC+TGG | - | chr3.2:87270007-87270026 | MS.gene072888:intron | 45.0% |
| !! | TTAATCTAAATATTATTTAA+AGG | + | chr3.2:87272333-87272352 | None:intergenic | 5.0% |
| !! | TTATTAAGTAAATATATAAA+AGG | - | chr3.2:87272754-87272773 | MS.gene072888:intron | 5.0% |
| ACACTACCCAGCAGATTTGG+AGG | + | chr3.2:87269159-87269178 | None:intergenic | 50.0% | |
| CATGCTTCTTCAGGTGAGTG+AGG | - | chr3.2:87269123-87269142 | MS.gene072888:intron | 50.0% | |
| CCGAGCGAAACTGTGATAGT+AGG | + | chr3.2:87271135-87271154 | None:intergenic | 50.0% | |
| CCTTGTACCTCCAAATCTGC+TGG | - | chr3.2:87269149-87269168 | MS.gene072888:intron | 50.0% | |
| CTCACTCACCTGAAGAAGCA+TGG | + | chr3.2:87269125-87269144 | None:intergenic | 50.0% | |
| CTGATGCGCACTGCACAATA+CGG | + | chr3.2:87269035-87269054 | None:intergenic | 50.0% | |
| GAACCAGAAACTTGCGTCAG+GGG | - | chr3.2:87272673-87272692 | MS.gene072888:intron | 50.0% | |
| GCTCGGCAATTGCATCTGTA+TGG | - | chr3.2:87270485-87270504 | MS.gene072888:intron | 50.0% | |
| GGAACCAGAAACTTGCGTCA+GGG | - | chr3.2:87272672-87272691 | MS.gene072888:intron | 50.0% | |
| GGAAGTTTCCCTTCAGGATC+AGG | + | chr3.2:87271451-87271470 | None:intergenic | 50.0% | |
| GGAATGGGATTGGGTGCTTA+CGG | + | chr3.2:87269334-87269353 | None:intergenic | 50.0% | |
| TCCGCCCAGGATACTAACAA+AGG | + | chr3.2:87271066-87271085 | None:intergenic | 50.0% | |
| TGAGTGAGGGGAAGAAGACA+TGG | + | chr3.2:87269280-87269299 | None:intergenic | 50.0% | |
| TGGAACCAGAAACTTGCGTC+AGG | - | chr3.2:87272671-87272690 | MS.gene072888:intron | 50.0% | |
| TTGACAAAGGGAAAGGCTGC+AGG | - | chr3.2:87269977-87269996 | MS.gene072888:intron | 50.0% | |
| ! | CCAGCAGATTTGGAGGTACA+AGG | + | chr3.2:87269152-87269171 | None:intergenic | 50.0% |
| ! | CTCACCTGAAGAAGCATGGT+CGG | + | chr3.2:87269121-87269140 | None:intergenic | 50.0% |
| ! | GGATTGGATTAGAGGGAGTG+AGG | - | chr3.2:87269823-87269842 | MS.gene072888:intron | 50.0% |
| ! | TTGGATTAGAGGGAGTGAGG+AGG | - | chr3.2:87269826-87269845 | MS.gene072888:intron | 50.0% |
| ! | TTGTCTGGAGCTCACACTCT+TGG | - | chr3.2:87271926-87271945 | MS.gene072888:intron | 50.0% |
| !! | ACTTTACCAGAAGGCGTCCA+TGG | + | chr3.2:87272016-87272035 | None:intergenic | 50.0% |
| !! | AGTGTGCTTTGAGACGACAC+AGG | - | chr3.2:87272966-87272985 | MS.gene072888:intron | 50.0% |
| ACTGAGACGTTAGCTGAGCC+TGG | + | chr3.2:87270906-87270925 | None:intergenic | 55.0% | |
| AGGCTCAGCTAACGTCTCAG+TGG | - | chr3.2:87270905-87270924 | MS.gene072888:CDS | 55.0% | |
| ATAGGGGGCCTGATCCTGAA+GGG | - | chr3.2:87271440-87271459 | MS.gene072888:intron | 55.0% | |
| ATTGTGCAGTGCGCATCAGG+TGG | - | chr3.2:87269036-87269055 | MS.gene072888:CDS | 55.0% | |
| CGTATTGTGCAGTGCGCATC+AGG | - | chr3.2:87269033-87269052 | MS.gene072888:CDS | 55.0% | |
| TATAGGGGGCCTGATCCTGA+AGG | - | chr3.2:87271439-87271458 | MS.gene072888:intron | 55.0% | |
| TCCTCGGGAAGTTTCCCTTC+AGG | + | chr3.2:87271457-87271476 | None:intergenic | 55.0% | |
| TCCTGAAGGGAAACTTCCCG+AGG | - | chr3.2:87271453-87271472 | MS.gene072888:intron | 55.0% | |
| TGACCCCTGACGCAAGTTTC+TGG | + | chr3.2:87272679-87272698 | None:intergenic | 55.0% | |
| TGCATACACATGCCGTGCAC+CGG | + | chr3.2:87273197-87273216 | None:intergenic | 55.0% | |
| CACAGCAATAACGTCCGCCC+AGG | + | chr3.2:87271079-87271098 | None:intergenic | 60.0% | |
| CGCTCCGACCATGCTTCTTC+AGG | - | chr3.2:87269114-87269133 | MS.gene072888:intron | 60.0% | |
| CTGGGCGGACGTTATTGCTG+TGG | - | chr3.2:87271077-87271096 | MS.gene072888:intron | 60.0% | |
| GAGAAGCCATGGACGCCTTC+TGG | - | chr3.2:87272007-87272026 | MS.gene072888:intron | 60.0% | |
| GCATACACATGCCGTGCACC+GGG | + | chr3.2:87273196-87273215 | None:intergenic | 60.0% | |
| GCGGACGTTATTGCTGTGGC+TGG | - | chr3.2:87271081-87271100 | MS.gene072888:intron | 60.0% | |
| GGCTGCAGGTGTGCTTCGTT+TGG | - | chr3.2:87269991-87270010 | MS.gene072888:intron | 60.0% | |
| GGGATTGGGTGCTTACGGCA+TGG | + | chr3.2:87269329-87269348 | None:intergenic | 60.0% | |
| GGGTGCTTACGGCATGGCGT+TGG | + | chr3.2:87269323-87269342 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 87269012 | 87273379 | 87269012 | ID=MS.gene072888 |
| chr3.2 | mRNA | 87269012 | 87273379 | 87269012 | ID=MS.gene072888.t1;Parent=MS.gene072888 |
| chr3.2 | exon | 87273256 | 87273379 | 87273256 | ID=MS.gene072888.t1.exon1;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87273256 | 87273379 | 87273256 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| chr3.2 | exon | 87273059 | 87273170 | 87273059 | ID=MS.gene072888.t1.exon2;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87273059 | 87273170 | 87273059 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| chr3.2 | exon | 87272336 | 87272463 | 87272336 | ID=MS.gene072888.t1.exon3;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87272336 | 87272463 | 87272336 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| chr3.2 | exon | 87271620 | 87271690 | 87271620 | ID=MS.gene072888.t1.exon4;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87271620 | 87271690 | 87271620 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| chr3.2 | exon | 87271401 | 87271443 | 87271401 | ID=MS.gene072888.t1.exon5;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87271401 | 87271443 | 87271401 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| chr3.2 | exon | 87271222 | 87271318 | 87271222 | ID=MS.gene072888.t1.exon6;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87271222 | 87271318 | 87271222 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| chr3.2 | exon | 87270864 | 87270947 | 87270864 | ID=MS.gene072888.t1.exon7;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87270864 | 87270947 | 87270864 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| chr3.2 | exon | 87270363 | 87270484 | 87270363 | ID=MS.gene072888.t1.exon8;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87270363 | 87270484 | 87270363 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| chr3.2 | exon | 87270172 | 87270238 | 87270172 | ID=MS.gene072888.t1.exon9;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87270172 | 87270238 | 87270172 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| chr3.2 | exon | 87269012 | 87269114 | 87269012 | ID=MS.gene072888.t1.exon10;Parent=MS.gene072888.t1 |
| chr3.2 | CDS | 87269012 | 87269114 | 87269012 | ID=cds.MS.gene072888.t1;Parent=MS.gene072888.t1 |
| Gene Sequence |
| Protein sequence |
