AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24236

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24236.t1 MTR_1g022970 98.559 347 5 0 1 347 1 347 0.0 710
MS.gene24236.t1 MTR_8g076820 63.636 308 111 1 40 347 24 330 6.88e-142 405
MS.gene24236.t1 MTR_5g021060 62.252 302 113 1 46 347 30 330 3.09e-138 395
MS.gene24236.t1 MTR_3g072190 52.980 302 133 2 46 347 26 318 7.67e-110 323
MS.gene24236.t1 MTR_4g122640 48.415 347 168 4 1 347 1 336 1.29e-109 323
MS.gene24236.t1 MTR_5g014100 52.229 314 145 3 38 347 19 331 4.39e-108 319
MS.gene24236.t1 MTR_3g466200 52.787 305 132 4 46 347 25 320 1.15e-107 318
MS.gene24236.t1 MTR_5g074970 52.941 306 131 4 46 347 30 326 7.85e-107 316
MS.gene24236.t1 MTR_4g029170 51.475 305 137 4 45 347 26 321 8.28e-107 315
MS.gene24236.t1 MTR_3g094650 50.329 304 140 3 46 347 28 322 5.94e-106 313
MS.gene24236.t1 MTR_2g084020 51.656 302 138 2 46 347 25 318 5.84e-105 311
MS.gene24236.t1 MTR_2g084010 51.656 302 138 2 46 347 25 318 7.83e-105 310
MS.gene24236.t1 MTR_7g072510 47.386 306 152 2 42 347 16 312 1.08e-103 307
MS.gene24236.t1 MTR_4g029180 51.667 300 134 4 50 347 31 321 3.18e-103 306
MS.gene24236.t1 MTR_2g084080 50.331 302 141 2 46 347 25 317 3.82e-103 306
MS.gene24236.t1 MTR_2g029820 49.007 302 154 0 46 347 29 330 1.04e-102 306
MS.gene24236.t1 MTR_2g084000 50.000 302 143 2 46 347 26 319 1.44e-102 305
MS.gene24236.t1 MTR_2g029560 48.675 302 155 0 46 347 24 325 1.87e-102 305
MS.gene24236.t1 MTR_7g093370 48.185 303 156 1 46 347 69 371 2.03e-102 306
MS.gene24236.t1 MTR_2g029830 49.338 302 153 0 46 347 28 329 4.80e-102 305
MS.gene24236.t1 MTR_5g083860 49.013 304 144 3 46 347 31 325 1.15e-101 303
MS.gene24236.t1 MTR_1g054205 48.515 303 155 1 46 347 24 326 1.15e-101 303
MS.gene24236.t1 MTR_2g029815 48.344 302 156 0 46 347 29 330 1.42e-101 303
MS.gene24236.t1 MTR_2g029750 48.077 312 162 0 36 347 19 330 1.44e-101 303
MS.gene24236.t1 MTR_4g029200 50.000 302 142 2 46 347 46 338 2.21e-101 302
MS.gene24236.t1 MTR_2g029740 48.397 312 161 0 36 347 19 330 6.24e-101 302
MS.gene24236.t1 MTR_2g084110 49.669 302 143 2 46 347 25 317 6.57e-101 300
MS.gene24236.t1 MTR_5g049280 47.213 305 158 3 46 347 33 337 1.57e-100 300
MS.gene24236.t1 MTR_2g029730 48.344 302 156 0 46 347 25 326 2.28e-100 300
MS.gene24236.t1 MTR_5g074860 49.342 304 143 4 46 346 29 324 3.87e-100 298
MS.gene24236.t1 MTR_2g029860 48.344 302 156 0 46 347 29 330 3.96e-100 300
MS.gene24236.t1 MTR_4g029190 49.032 310 146 4 41 347 40 340 8.81e-100 298
MS.gene24236.t1 MTR_2g040000 49.191 309 152 2 42 347 25 331 9.74e-100 298
MS.gene24236.t1 MTR_2g029850 48.675 302 155 0 46 347 29 330 1.58e-99 298
MS.gene24236.t1 MTR_2g029910 49.013 304 152 2 46 347 30 332 2.48e-99 298
MS.gene24236.t1 MTR_3g094670 49.013 304 144 3 46 347 28 322 2.89e-99 296
MS.gene24236.t1 MTR_7g072480 49.677 310 139 4 42 347 20 316 3.56e-99 296
MS.gene24236.t1 MTR_5g074760 47.869 305 148 4 46 347 25 321 2.19e-98 294
MS.gene24236.t1 MTR_2g084090 49.175 303 144 3 46 347 25 318 3.57e-98 293
MS.gene24236.t1 MTR_5g017850 51.171 299 142 3 50 347 31 326 5.45e-98 293
MS.gene24236.t1 MTR_3g094630 49.342 304 143 3 46 347 28 322 5.88e-98 293
MS.gene24236.t1 MTR_4g125940 48.355 304 153 2 46 347 28 329 6.34e-98 293
MS.gene24236.t1 MTR_2g029800 47.020 302 160 0 46 347 29 330 6.98e-98 294
MS.gene24236.t1 MTR_2g028980 49.007 302 154 0 46 347 29 330 7.20e-98 294
MS.gene24236.t1 MTR_5g074740 47.541 305 149 4 46 347 25 321 1.00e-97 292
MS.gene24236.t1 MTR_7g026990 48.658 298 143 3 50 347 35 322 9.21e-97 290
MS.gene24236.t1 MTR_5g074710 47.869 305 148 4 46 347 25 321 3.62e-96 288
MS.gene24236.t1 MTR_5g017860 50.167 299 145 3 50 347 31 326 1.85e-95 287
MS.gene24236.t1 MTR_4g030890 47.097 310 159 3 38 347 92 396 1.46e-94 288
MS.gene24236.t1 MTR_4g083710 46.557 305 153 3 46 347 27 324 1.52e-93 282
MS.gene24236.t1 MTR_4g031140 46.557 305 158 3 43 347 25 324 1.79e-93 282
MS.gene24236.t1 MTR_1g115900 46.711 304 151 4 46 347 27 321 1.95e-93 282
MS.gene24236.t1 MTR_3g466180 48.013 302 148 2 46 347 31 323 2.46e-92 279
MS.gene24236.t1 MTR_3g072190 51.351 259 117 2 89 347 2 251 1.79e-91 274
MS.gene24236.t1 MTR_4g125940 49.638 276 135 2 74 347 1 274 3.44e-91 274
MS.gene24236.t1 MTR_3g467600 44.918 305 158 3 46 347 27 324 1.39e-89 271
MS.gene24236.t1 MTR_4g074995 45.246 305 144 4 46 347 24 308 1.05e-87 266
MS.gene24236.t1 MTR_4g074990 44.262 305 144 3 46 347 24 305 2.81e-85 260
MS.gene24236.t1 MTR_1g101830 45.033 302 160 5 46 347 27 322 3.51e-83 255
MS.gene24236.t1 MTR_2g029830 48.249 257 133 0 91 347 5 261 1.17e-82 253
MS.gene24236.t1 MTR_5g022870 44.771 306 155 7 45 347 22 316 4.87e-82 252
MS.gene24236.t1 MTR_3g092990 43.813 299 165 3 50 347 30 326 1.14e-81 251
MS.gene24236.t1 MTR_2g088770 45.333 300 158 5 50 347 30 325 3.40e-81 250
MS.gene24236.t1 MTR_0155s0040 43.564 303 158 7 45 347 26 315 3.42e-81 250
MS.gene24236.t1 MTR_1g077000 42.053 302 162 6 46 347 39 327 1.75e-79 246
MS.gene24236.t1 MTR_8g075100 42.810 306 161 7 45 347 25 319 1.95e-79 246
MS.gene24236.t1 MTR_4g133800 44.295 298 155 6 51 347 46 333 3.36e-79 246
MS.gene24236.t1 MTR_1g086320 42.994 314 173 3 38 347 22 333 5.61e-79 245
MS.gene24236.t1 MTR_2g008710 43.709 302 159 5 50 347 31 325 6.57e-78 242
MS.gene24236.t1 MTR_4g046713 42.244 303 171 3 46 347 27 326 2.43e-77 240
MS.gene24236.t1 MTR_1g086490 41.433 321 175 4 38 347 22 340 1.04e-76 239
MS.gene24236.t1 MTR_1g038680 42.384 302 168 5 50 347 33 332 1.99e-76 238
MS.gene24236.t1 MTR_4g074980 42.715 302 141 5 46 347 25 294 3.63e-76 236
MS.gene24236.t1 MTR_5g074860 42.105 304 126 4 46 346 29 285 4.27e-76 236
MS.gene24236.t1 MTR_1g025980 42.810 306 166 6 42 346 20 317 9.23e-76 236
MS.gene24236.t1 MTR_7g107520 42.718 309 169 5 41 347 18 320 4.04e-75 234
MS.gene24236.t1 MTR_7g086820 42.617 298 162 6 50 347 24 312 1.23e-74 233
MS.gene24236.t1 MTR_4g074980 48.511 235 112 2 46 277 25 253 9.09e-74 229
MS.gene24236.t1 MTR_6g027440 42.667 300 160 6 50 347 25 314 1.39e-73 231
MS.gene24236.t1 MTR_2g437770 42.904 303 161 8 46 347 50 341 3.08e-73 230
MS.gene24236.t1 MTR_6g043280 40.432 324 173 7 27 347 26 332 4.82e-71 224
MS.gene24236.t1 MTR_4g132490 39.297 313 178 5 42 347 20 327 5.19e-71 224
MS.gene24236.t1 MTR_4g114210 42.405 316 170 5 37 347 12 320 1.01e-70 223
MS.gene24236.t1 MTR_7g086870 41.275 298 163 6 50 347 26 311 4.53e-70 221
MS.gene24236.t1 MTR_3g092990 41.472 299 161 4 50 347 30 315 9.43e-70 221
MS.gene24236.t1 MTR_7g029030 38.511 309 170 4 46 347 25 320 1.48e-69 220
MS.gene24236.t1 MTR_4g087965 40.264 303 174 5 46 343 42 342 5.35e-69 219
MS.gene24236.t1 MTR_2g067440 38.525 366 181 8 11 346 35 386 1.43e-68 220
MS.gene24236.t1 MTR_2g078610 40.541 333 163 7 46 346 76 405 2.85e-67 217
MS.gene24236.t1 MTR_2g077990 39.940 333 165 7 46 346 76 405 3.23e-65 212
MS.gene24236.t1 MTR_6g043240 40.656 305 165 7 45 347 41 331 5.34e-65 209
MS.gene24236.t1 MTR_5g016010 34.104 346 204 5 1 343 1 325 5.37e-63 204
MS.gene24236.t1 MTR_1g009750 36.721 305 187 4 46 347 27 328 5.73e-63 204
MS.gene24236.t1 MTR_8g062780 39.016 305 180 5 46 347 23 324 1.21e-62 202
MS.gene24236.t1 MTR_2g099175 36.482 307 183 4 46 347 36 335 1.27e-62 203
MS.gene24236.t1 MTR_6g043460 39.667 300 170 5 45 343 35 324 4.03e-62 202
MS.gene24236.t1 MTR_4g095450 37.542 301 178 4 46 343 27 320 2.70e-61 199
MS.gene24236.t1 MTR_3g105790 39.145 304 177 4 46 347 25 322 3.16e-61 199
MS.gene24236.t1 MTR_2g078280 39.688 320 158 7 46 333 76 392 9.72e-61 200
MS.gene24236.t1 MTR_1g066380 39.016 305 175 4 46 347 27 323 3.36e-60 196
MS.gene24236.t1 MTR_4g127670 37.582 306 181 5 46 347 24 323 6.60e-60 196
MS.gene24236.t1 MTR_1g090760 37.049 305 187 4 46 347 28 330 9.53e-60 195
MS.gene24236.t1 MTR_2g008160 40.836 311 156 8 50 347 28 323 1.25e-59 195
MS.gene24236.t1 MTR_0147s0010 37.346 324 167 4 43 346 74 381 3.76e-59 195
MS.gene24236.t1 MTR_1g066710 38.033 305 178 4 46 347 27 323 6.41e-59 193
MS.gene24236.t1 MTR_1g066640 38.689 305 176 4 46 347 27 323 3.44e-57 189
MS.gene24236.t1 MTR_1g066680 38.436 307 173 6 46 347 27 322 5.08e-57 188
MS.gene24236.t1 MTR_5g033470 37.500 304 181 7 50 347 77 377 5.97e-57 189
MS.gene24236.t1 MTR_2g067450 39.542 306 173 7 46 346 11 309 2.48e-56 186
MS.gene24236.t1 MTR_5g074700 42.241 232 109 5 119 347 5 214 2.76e-56 182
MS.gene24236.t1 MTR_0286s0010 34.967 306 190 6 46 347 34 334 1.71e-55 184
MS.gene24236.t1 MTR_6g008075 34.967 306 190 6 46 347 34 334 1.71e-55 184
MS.gene24236.t1 MTR_2g008730 36.424 302 157 5 50 347 31 301 3.83e-55 182
MS.gene24236.t1 MTR_3g072210 47.668 193 90 4 157 347 55 238 4.78e-53 175
MS.gene24236.t1 MTR_4g132110 35.948 306 177 5 45 343 31 324 3.19e-52 176
MS.gene24236.t1 MTR_1g009750 33.333 303 183 4 46 347 27 311 5.67e-52 174
MS.gene24236.t1 MTR_1g066380 39.847 261 146 4 90 347 3 255 1.96e-50 169
MS.gene24236.t1 MTR_4g132110 35.370 311 177 6 45 343 31 329 6.08e-50 170
MS.gene24236.t1 MTR_2g008160 36.774 310 135 7 50 347 28 288 3.58e-48 164
MS.gene24236.t1 MTR_3g105790 39.662 237 139 3 113 347 12 246 1.81e-44 153
MS.gene24236.t1 MTR_2g008160 47.191 178 86 4 50 225 28 199 8.08e-43 147
MS.gene24236.t1 MTR_7g072490 36.948 249 94 3 92 340 2 187 8.41e-43 147
MS.gene24236.t1 MTR_2g029880 41.146 192 99 2 158 347 9 188 2.56e-41 144
MS.gene24236.t1 MTR_3g072260 59.633 109 44 0 46 154 26 134 7.77e-39 135
MS.gene24236.t1 MTR_3g462850 46.099 141 73 3 210 347 9 149 1.02e-34 124
MS.gene24236.t1 MTR_2g077980 33.333 276 144 8 108 346 11 283 7.04e-30 115
MS.gene24236.t1 MTR_2g078560 34.071 226 116 4 152 346 96 319 3.21e-29 115
MS.gene24236.t1 MTR_7g086790 35.450 189 100 5 93 281 17 183 2.73e-25 101
MS.gene24236.t1 MTR_1g089005 42.017 119 62 2 46 158 15 132 1.36e-23 95.5
MS.gene24236.t1 MTR_6g048160 64.789 71 21 2 85 155 22 88 1.51e-22 90.9
MS.gene24236.t1 MTR_4g114220 47.748 111 40 4 72 182 29 121 4.88e-20 85.5
MS.gene24236.t1 MTR_5g074770 44.086 93 51 1 254 346 17 108 3.42e-19 82.0
MS.gene24236.t1 MTR_3g107060 28.839 267 116 8 77 328 105 312 1.83e-18 85.1
MS.gene24236.t1 MTR_7g086810 36.290 124 52 2 42 164 1 98 6.05e-18 82.4
MS.gene24236.t1 MTR_2g029930 45.556 90 24 2 46 124 19 94 1.62e-17 77.4
MS.gene24236.t1 MTR_4g031040 32.759 174 73 3 105 278 1 130 1.70e-17 78.6
MS.gene24236.t1 MTR_5g058120 33.129 163 96 4 181 343 6 155 2.26e-16 78.2
MS.gene24236.t1 MTR_1g098320 47.368 76 38 1 268 343 47 120 1.03e-15 73.6
MS.gene24236.t1 MTR_7g107500 43.023 86 46 2 262 347 15 97 7.43e-15 70.1
MS.gene24236.t1 MTR_7g086785 44.578 83 45 1 89 171 1 82 7.89e-15 71.2
MS.gene24236.t1 MTR_4g012865 49.296 71 36 0 43 113 74 144 8.77e-15 71.2
MS.gene24236.t1 MTR_0147s0040 41.333 75 42 1 272 346 10 82 1.70e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24236.t1 AT1G44970 71.225 351 92 4 1 347 1 346 7.02e-177 494
MS.gene24236.t1 AT4G36430 60.927 302 117 1 46 347 30 330 9.61e-140 400
MS.gene24236.t1 AT2G18150 58.385 322 125 2 26 347 24 336 1.16e-139 400
MS.gene24236.t1 AT5G66390 61.589 302 115 1 46 347 33 333 3.17e-138 396
MS.gene24236.t1 AT2G18140 55.696 316 135 2 32 347 25 335 9.27e-130 374
MS.gene24236.t1 AT3G50990 57.426 303 128 1 45 347 40 341 2.82e-125 363
MS.gene24236.t1 AT5G06720 50.662 302 149 0 46 347 32 333 7.38e-111 326
MS.gene24236.t1 AT2G35380 53.548 310 124 4 50 347 34 335 3.85e-105 312
MS.gene24236.t1 AT5G06730 47.682 302 158 0 46 347 33 334 3.06e-104 310
MS.gene24236.t1 AT2G38390 50.165 303 150 1 46 347 31 333 2.13e-103 308
MS.gene24236.t1 AT1G49570 48.246 342 171 4 6 343 7 346 5.44e-101 302
MS.gene24236.t1 AT4G16270 49.379 322 150 7 32 347 34 348 7.80e-101 301
MS.gene24236.t1 AT2G38380 49.835 303 151 1 46 347 31 333 1.82e-100 300
MS.gene24236.t1 AT5G19890 49.515 309 148 4 41 347 25 327 8.30e-100 298
MS.gene24236.t1 AT5G05340 46.711 304 151 3 46 347 30 324 1.04e-99 298
MS.gene24236.t1 AT5G58400 48.197 305 146 4 46 347 30 325 1.10e-99 298
MS.gene24236.t1 AT4G08770 48.355 304 155 2 46 347 24 327 4.40e-99 297
MS.gene24236.t1 AT2G22420 48.344 302 151 3 46 347 23 319 6.28e-99 296
MS.gene24236.t1 AT4G08780 48.026 304 156 2 46 347 24 327 6.58e-99 296
MS.gene24236.t1 AT5G58390 50.492 305 139 4 46 347 21 316 4.89e-95 285
MS.gene24236.t1 AT3G32980 46.711 304 160 2 46 347 31 334 6.62e-95 286
MS.gene24236.t1 AT3G49110 47.368 304 158 2 46 347 33 336 2.48e-94 285
MS.gene24236.t1 AT1G68850 43.770 313 172 3 39 347 23 335 1.09e-93 283
MS.gene24236.t1 AT1G14550 48.515 303 148 3 46 347 26 321 1.37e-93 282
MS.gene24236.t1 AT3G49120 46.711 304 160 2 46 347 32 335 1.01e-92 281
MS.gene24236.t1 AT1G14540 45.364 302 158 2 46 347 21 315 2.79e-90 273
MS.gene24236.t1 AT3G03670 44.482 299 163 2 49 347 26 321 4.50e-87 265
MS.gene24236.t1 AT5G19880 44.262 305 167 2 46 347 25 329 2.88e-86 263
MS.gene24236.t1 AT5G64120 40.058 347 189 7 1 347 1 328 1.87e-82 254
MS.gene24236.t1 AT5G42180 45.215 303 157 6 45 346 22 316 4.37e-82 252
MS.gene24236.t1 AT5G51890 44.262 305 161 6 45 347 25 322 1.10e-81 251
MS.gene24236.t1 AT5G17820 41.946 298 161 5 50 347 28 313 1.12e-81 251
MS.gene24236.t1 AT1G05260 44.224 303 165 4 46 347 26 325 5.87e-81 250
MS.gene24236.t1 AT5G17820 41.946 298 161 5 50 347 81 366 2.71e-80 249
MS.gene24236.t1 AT1G71695 44.444 306 158 6 45 347 43 339 4.66e-80 248
MS.gene24236.t1 AT2G35380 51.765 255 103 4 105 347 1 247 6.96e-80 244
MS.gene24236.t1 AT4G33420 43.894 303 157 6 45 347 36 325 1.60e-78 243
MS.gene24236.t1 AT4G33420 43.894 303 157 6 45 347 83 372 7.63e-78 243
MS.gene24236.t1 AT4G11290 43.333 300 166 3 50 347 29 326 2.23e-77 241
MS.gene24236.t1 AT3G21770 42.258 310 171 5 37 343 20 324 1.22e-76 239
MS.gene24236.t1 AT5G15180 43.092 304 167 5 45 347 31 329 4.93e-76 237
MS.gene24236.t1 AT1G05240 41.528 301 168 5 46 343 26 321 6.48e-73 229
MS.gene24236.t1 AT1G05250 41.528 301 168 5 46 343 26 321 6.48e-73 229
MS.gene24236.t1 AT2G41480 42.904 303 161 5 50 347 33 328 1.16e-72 228
MS.gene24236.t1 AT5G39580 42.475 299 163 6 50 347 29 319 2.40e-72 228
MS.gene24236.t1 AT3G01190 40.984 305 174 5 43 347 23 321 1.13e-70 223
MS.gene24236.t1 AT4G26010 41.137 299 160 6 50 347 26 309 1.35e-70 223
MS.gene24236.t1 AT4G26010 41.137 299 160 6 50 347 54 337 1.90e-70 223
MS.gene24236.t1 AT2G18980 40.000 305 174 4 46 347 25 323 8.15e-70 221
MS.gene24236.t1 AT4G25980 40.924 303 168 5 50 347 30 326 4.43e-69 219
MS.gene24236.t1 AT2G39040 42.395 309 167 6 46 347 46 350 5.52e-69 220
MS.gene24236.t1 AT4G30170 39.032 310 178 5 42 347 23 325 9.77e-69 218
MS.gene24236.t1 AT4G33870 37.048 332 171 4 50 346 72 400 3.91e-68 219
MS.gene24236.t1 AT1G30870 41.967 305 164 7 46 347 51 345 3.26e-67 215
MS.gene24236.t1 AT5G64100 40.199 301 167 7 50 347 41 331 7.50e-67 214
MS.gene24236.t1 AT5G64110 41.528 301 165 5 50 347 38 330 9.74e-67 213
MS.gene24236.t1 AT4G37530 38.158 304 183 3 43 343 24 325 1.86e-65 210
MS.gene24236.t1 AT4G31760 40.065 307 176 3 43 347 26 326 1.88e-65 210
MS.gene24236.t1 AT4G37520 36.877 301 185 3 46 343 27 325 1.30e-63 205
MS.gene24236.t1 AT5G40150 40.461 304 172 5 46 347 32 328 3.18e-63 204
MS.gene24236.t1 AT3G49960 36.393 305 189 3 46 347 27 329 3.49e-63 204
MS.gene24236.t1 AT5G47000 38.636 308 173 7 46 347 33 330 2.08e-62 202
MS.gene24236.t1 AT1G77100 38.801 317 174 7 36 347 18 319 5.74e-62 201
MS.gene24236.t1 AT4G37520 36.545 301 183 4 46 343 27 322 7.62e-62 201
MS.gene24236.t1 AT5G67400 36.721 305 188 3 46 347 27 329 2.70e-61 199
MS.gene24236.t1 AT2G34060 38.033 305 180 7 46 344 42 343 3.33e-61 199
MS.gene24236.t1 AT3G28200 37.500 304 180 4 46 347 21 316 1.37e-59 194
MS.gene24236.t1 AT2G24800 39.016 305 177 5 46 347 31 329 2.28e-59 194
MS.gene24236.t1 AT1G24110 37.908 306 181 7 46 347 22 322 2.90e-59 194
MS.gene24236.t1 AT4G17690 37.377 305 180 5 46 347 26 322 3.67e-59 194
MS.gene24236.t1 AT5G14130 35.314 303 191 4 46 347 32 330 3.20e-58 191
MS.gene24236.t1 AT1G34510 37.458 299 171 6 50 347 26 309 3.69e-58 191
MS.gene24236.t1 AT5G14130 35.314 303 191 4 46 347 73 371 8.59e-58 191
MS.gene24236.t1 AT5G22410 38.000 300 172 8 50 344 32 322 3.53e-57 189
MS.gene24236.t1 AT2G43480 35.599 309 184 6 46 347 35 335 1.26e-56 187
MS.gene24236.t1 AT5G24070 33.846 325 194 6 36 347 19 335 1.77e-56 187
MS.gene24236.t1 AT2G37130 38.079 302 175 5 50 347 3 296 2.94e-56 185
MS.gene24236.t1 AT3G17070 36.306 314 178 7 45 347 37 339 3.16e-56 186
MS.gene24236.t1 AT2G37130 37.908 306 178 5 46 347 30 327 3.37e-56 186
MS.gene24236.t1 AT4G37530 38.281 256 155 2 43 295 24 279 1.05e-55 183
MS.gene24236.t1 AT4G21960 37.742 310 174 5 45 347 30 327 2.63e-55 184
MS.gene24236.t1 AT4G25980 48.171 164 81 3 50 213 75 234 9.24e-44 152
MS.gene24236.t1 AT3G17070 34.686 271 154 8 88 347 18 276 5.54e-42 147
MS.gene24236.t1 AT5G39580 45.455 165 85 3 50 214 29 188 7.75e-39 138
MS.gene24236.t1 AT2G24800 38.614 202 109 3 46 247 31 217 2.20e-36 132
MS.gene24236.t1 AT4G32320 30.337 267 112 8 77 328 114 321 4.55e-20 90.1
MS.gene24236.t1 AT3G42570 35.052 97 62 1 118 213 53 149 4.05e-13 66.6
MS.gene24236.t1 AT4G08390 26.394 269 144 10 80 329 127 360 7.05e-12 66.2
MS.gene24236.t1 AT4G08390 26.394 269 144 10 80 329 127 360 7.05e-12 66.2
MS.gene24236.t1 AT4G08390 26.394 269 144 10 80 329 127 360 7.05e-12 66.2
MS.gene24236.t1 AT4G08390 26.394 269 144 10 80 329 126 359 7.28e-12 66.2

Find 80 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGTTGGTTGTTTCCATTT+TGG 0.258817 1.2:-1880976 None:intergenic
CCTAAGTAAGAGTTTGTAAT+AGG 0.274011 1.2:-1881113 None:intergenic
ACCACTAGAGGAATGTCTTT+TGG 0.298662 1.2:+1879728 MS.gene24236:CDS
CCTATTACAAACTCTTACTT+AGG 0.320265 1.2:+1881113 MS.gene24236:CDS
CAAAGACTATACAACCAAAA+TGG 0.350393 1.2:+1880962 MS.gene24236:CDS
ATTATTTCTCCCTTGGACTT+TGG 0.352038 1.2:+1881067 MS.gene24236:CDS
AGGTATTATCAAACATTCTT+GGG 0.352062 1.2:-1881093 None:intergenic
TTTGAGTCTCTCCTTCCTAA+TGG 0.355118 1.2:-1880653 None:intergenic
TAGGTATTATCAAACATTCT+TGG 0.367240 1.2:-1881094 None:intergenic
GCCTTGTCTATGATCAAGTT+GGG 0.368870 1.2:+1881247 MS.gene24236:CDS
TTTGGCTGGGGTGGTCATCA+TGG 0.381646 1.2:+1879701 MS.gene24236:CDS
AGACCTTCAATAGTTGCATT+TGG 0.390969 1.2:-1880716 None:intergenic
TGACAATATTATTTCTCCCT+TGG 0.404351 1.2:+1881060 MS.gene24236:CDS
CCACCAAATGCAACTATTGA+AGG 0.405803 1.2:+1880713 MS.gene24236:CDS
GTAGACCTTGTTGCCCTCTC+AGG 0.409416 1.2:+1880773 MS.gene24236:CDS
TATTGTTGCCCTTGCTGCTA+GGG 0.421519 1.2:+1880345 MS.gene24236:CDS
ATATTGTTGCCCTTGCTGCT+AGG 0.427899 1.2:+1880344 MS.gene24236:CDS
AAACTCTTACTTAGGGGAAA+AGG 0.433563 1.2:+1881121 MS.gene24236:CDS
CTATTACAAACTCTTACTTA+GGG 0.433600 1.2:+1881114 MS.gene24236:CDS
ATATTGTCACCACCTGATCT+TGG 0.435527 1.2:-1881046 None:intergenic
AACAGAGTGGAGGACCCAAC+TGG 0.440175 1.2:+1880624 MS.gene24236:intron
AAATCAATGTGCCCAAGATC+AGG 0.449302 1.2:+1881034 MS.gene24236:CDS
TCCTAATGGTAGCTCCCAGT+TGG 0.462642 1.2:-1880639 None:intergenic
GGGAACCTTCGTCCTCTCAC+TGG 0.462709 1.2:+1881268 MS.gene24236:CDS
CCTTCAATAGTTGCATTTGG+TGG 0.468155 1.2:-1880713 None:intergenic
TGCTACAATAAGAATGACTT+TGG 0.469823 1.2:-1879627 None:intergenic
GCTTCTCACGGGGAATGTTA+AGG 0.470744 1.2:+1881165 MS.gene24236:CDS
TGCCTTGTCTATGATCAAGT+TGG 0.474042 1.2:+1881246 MS.gene24236:CDS
AATGTAGGTGCACATACAAT+TGG 0.478313 1.2:+1880914 MS.gene24236:intron
TGATGAGATCAAATCTAAGT+TGG 0.478968 1.2:+1880288 MS.gene24236:CDS
TATTGTCACCACCTGATCTT+GGG 0.480354 1.2:-1881045 None:intergenic
TTTCTAGATTCGAATCTGGT+TGG 0.488001 1.2:-1880991 None:intergenic
CTTCAATAGTTGCATTTGGT+GGG 0.492398 1.2:-1880712 None:intergenic
TGACATTGTCATGTCAGTCT+TGG 0.493447 1.2:+1879793 MS.gene24236:CDS
CCTAATGGTAGCTCCCAGTT+GGG 0.500426 1.2:-1880638 None:intergenic
TCAATAGTTGCATTTGGTGG+GGG 0.508864 1.2:-1880710 None:intergenic
TTCAATAGTTGCATTTGGTG+GGG 0.518047 1.2:-1880711 None:intergenic
TGACAATGTCATTAGCTTGA+GGG 0.524979 1.2:-1879781 None:intergenic
CCCAACTGGGAGCTACCATT+AGG 0.529796 1.2:+1880638 MS.gene24236:CDS
TCAGATGAAGTGCTTCTCAC+GGG 0.531970 1.2:+1881154 MS.gene24236:CDS
CTTCCACGACTGCTTCGTGC+AGG 0.531991 1.2:+1879868 MS.gene24236:CDS
TTTGAAAGTTCCACCTGAGA+GGG 0.537314 1.2:-1880786 None:intergenic
TCTGCACATGAGACTGTATG+AGG 0.537536 1.2:-1880322 None:intergenic
CATGAAAACTGATAGAATTG+AGG 0.540572 1.2:-1879758 None:intergenic
CCAAAGTGAAAATCATGGAC+AGG 0.542594 1.2:-1879683 None:intergenic
TTCAGATGAAGTGCTTCTCA+CGG 0.542726 1.2:+1881153 MS.gene24236:CDS
TCTTGGGGAGCCAAAGTCCA+AGG 0.548432 1.2:-1881077 None:intergenic
CCCAGCCAAAGTGAAAATCA+TGG 0.562562 1.2:-1879688 None:intergenic
ATTGTTGCCCTTGCTGCTAG+GGG 0.562619 1.2:+1880346 MS.gene24236:CDS
GGCTGGGGTGGTCATCATGG+TGG 0.563986 1.2:+1879704 MS.gene24236:CDS
TGTTAAGGAGACTCGTGACT+TGG 0.564179 1.2:+1881180 MS.gene24236:CDS
CTTGGAGAAGGCCATTGCTA+AGG 0.567799 1.2:+1879811 MS.gene24236:CDS
AATCATGGACAGGATGAGCA+TGG 0.575254 1.2:-1879673 None:intergenic
ATCATGGACAGGATGAGCAT+GGG 0.575357 1.2:-1879672 None:intergenic
TCCAAAAGACATTCCTCTAG+TGG 0.581773 1.2:-1879729 None:intergenic
AGTGGATCCCCTAGCAGCAA+GGG 0.584231 1.2:-1880353 None:intergenic
CCTTGTCTATGATCAAGTTG+GGG 0.590007 1.2:+1881248 MS.gene24236:CDS
ATGACAATGTCATTAGCTTG+AGG 0.594591 1.2:-1879782 None:intergenic
CAACAAGGTCTACTTCATCA+AGG 0.594873 1.2:-1880763 None:intergenic
CAGTGGATCCCCTAGCAGCA+AGG 0.596237 1.2:-1880354 None:intergenic
CATCATGGTGGAACCACTAG+AGG 0.601048 1.2:+1879716 MS.gene24236:CDS
TTACCTGCACGAAGCAGTCG+TGG 0.601762 1.2:-1879871 None:intergenic
AATCACTTCAAAACCTCGGA+CGG 0.602593 1.2:-1880266 None:intergenic
GGTATTATCAAACATTCTTG+GGG 0.603868 1.2:-1881092 None:intergenic
CCCCAACTTGATCATAGACA+AGG 0.616517 1.2:-1881248 None:intergenic
ACAGAGTGGAGGACCCAACT+GGG 0.620032 1.2:+1880625 MS.gene24236:intron
TGTCATGTCAGTCTTGGAGA+AGG 0.621040 1.2:+1879799 MS.gene24236:CDS
CATCAATCACTTCAAAACCT+CGG 0.621498 1.2:-1880270 None:intergenic
TATTACAAACTCTTACTTAG+GGG 0.623907 1.2:+1881115 MS.gene24236:CDS
ATTTGAAAGTTCCACCTGAG+AGG 0.625792 1.2:-1880787 None:intergenic
ACTGGGAGCTACCATTAGGA+AGG 0.630159 1.2:+1880642 MS.gene24236:CDS
TATTCTGATATCCTTAGCAA+TGG 0.632717 1.2:-1879822 None:intergenic
TTCCACCTGAGAGGGCAACA+AGG 0.641016 1.2:-1880778 None:intergenic
CTTGGGGAGCCAAAGTCCAA+GGG 0.659085 1.2:-1881076 None:intergenic
TCAATGTGCCCAAGATCAGG+TGG 0.661889 1.2:+1881037 MS.gene24236:CDS
CAGATGAAGTGCTTCTCACG+GGG 0.668421 1.2:+1881155 MS.gene24236:CDS
TCGCCATTAAAACCAGTGAG+AGG 0.697253 1.2:-1881280 None:intergenic
TAAAACCAGTGAGAGGACGA+AGG 0.705812 1.2:-1881273 None:intergenic
AATGACTTTGGTGAAAGACA+TGG 0.712623 1.2:-1879615 None:intergenic
AGGTGCACATACAATTGGTG+TGG 0.734240 1.2:+1880919 MS.gene24236:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACAATTTTTTAATAGACTA+TGG + chr1.2:1880492-1880511 MS.gene24236:intron 15.0%
!!! ATTATTTTATGTTTTACTTG+CGG - chr1.2:1880022-1880041 None:intergenic 15.0%
!!! TTATTTTACTTTTAATGACA+GGG + chr1.2:1880169-1880188 MS.gene24236:intron 15.0%
!!! TTTATTTTACTTTTAATGAC+AGG + chr1.2:1880168-1880187 MS.gene24236:intron 15.0%
!!! CTAGAAAAAACATTTTACTT+TGG + chr1.2:1881007-1881026 MS.gene24236:CDS 20.0%
!!! TTTTTTCTCTCAAAATTTGT+TGG - chr1.2:1880092-1880111 None:intergenic 20.0%
! ACAATTGTCAGTGAAAAAAA+TGG + chr1.2:1880226-1880245 MS.gene24236:CDS 25.0%
! AGGTATTATCAAACATTCTT+GGG - chr1.2:1881096-1881115 None:intergenic 25.0%
! CATGCAAAGTATATAAAAGT+TGG - chr1.2:1880421-1880440 None:intergenic 25.0%
! CTATTACAAACTCTTACTTA+GGG + chr1.2:1881114-1881133 MS.gene24236:CDS 25.0%
! TAGGTATTATCAAACATTCT+TGG - chr1.2:1881097-1881116 None:intergenic 25.0%
! TATTACAAACTCTTACTTAG+GGG + chr1.2:1881115-1881134 MS.gene24236:CDS 25.0%
! TGTAACACTAATAGAAAATG+TGG - chr1.2:1880819-1880838 None:intergenic 25.0%
!!! AATATTCTTTTGAAACAGAG+TGG + chr1.2:1880611-1880630 MS.gene24236:intron 25.0%
!!! TTTTTTTCTTACAAGAACAG+TGG - chr1.2:1880374-1880393 None:intergenic 25.0%
ACTTTGCATGTCATATACTA+AGG + chr1.2:1880431-1880450 MS.gene24236:intron 30.0%
ATTGTCAGTGAAAAAAATGG+TGG + chr1.2:1880229-1880248 MS.gene24236:CDS 30.0%
CAAAGACTATACAACCAAAA+TGG + chr1.2:1880962-1880981 MS.gene24236:CDS 30.0%
CAAATTAAGAACGTGTATTC+AGG - chr1.2:1880069-1880088 None:intergenic 30.0%
CATGAAAACTGATAGAATTG+AGG - chr1.2:1879761-1879780 None:intergenic 30.0%
CCTAAGTAAGAGTTTGTAAT+AGG - chr1.2:1881116-1881135 None:intergenic 30.0%
CCTATTACAAACTCTTACTT+AGG + chr1.2:1881113-1881132 MS.gene24236:CDS 30.0%
CTTGATGTTATATCGAAGTA+CGG - chr1.2:1879991-1880010 None:intergenic 30.0%
CTTTGCATGTCATATACTAA+GGG + chr1.2:1880432-1880451 MS.gene24236:intron 30.0%
GGTATTATCAAACATTCTTG+GGG - chr1.2:1881095-1881114 None:intergenic 30.0%
TATTCTGATATCCTTAGCAA+TGG - chr1.2:1879825-1879844 None:intergenic 30.0%
TGATGAGATCAAATCTAAGT+TGG + chr1.2:1880288-1880307 MS.gene24236:CDS 30.0%
TGCTACAATAAGAATGACTT+TGG - chr1.2:1879630-1879649 None:intergenic 30.0%
TTAAGTCTTTGCATTTGTAC+CGG + chr1.2:1879955-1879974 MS.gene24236:intron 30.0%
TTTGCATGTCATATACTAAG+GGG + chr1.2:1880433-1880452 MS.gene24236:intron 30.0%
! AGATCGTCACTTTATAATGT+AGG + chr1.2:1880899-1880918 MS.gene24236:intron 30.0%
! GCAATACATGTTCTAAATAC+AGG + chr1.2:1879909-1879928 MS.gene24236:intron 30.0%
! TGACAATATTATTTCTCCCT+TGG + chr1.2:1881060-1881079 MS.gene24236:CDS 30.0%
!!! GTTTTTTCTAGATTCGAATC+TGG - chr1.2:1880998-1881017 None:intergenic 30.0%
!!! TTAACATTTTTCAAGCGTCA+AGG + chr1.2:1880740-1880759 MS.gene24236:CDS 30.0%
AAACTCTTACTTAGGGGAAA+AGG + chr1.2:1881121-1881140 MS.gene24236:CDS 35.0%
AATGTAGGTGCACATACAAT+TGG + chr1.2:1880914-1880933 MS.gene24236:intron 35.0%
AGACCTTCAATAGTTGCATT+TGG - chr1.2:1880719-1880738 None:intergenic 35.0%
CATCAATCACTTCAAAACCT+CGG - chr1.2:1880273-1880292 None:intergenic 35.0%
CTTCAATAGTTGCATTTGGT+GGG - chr1.2:1880715-1880734 None:intergenic 35.0%
TTAAGAACGTGTATTCAGGA+AGG - chr1.2:1880065-1880084 None:intergenic 35.0%
TTTCTAGATTCGAATCTGGT+TGG - chr1.2:1880994-1881013 None:intergenic 35.0%
! ATGACAATGTCATTAGCTTG+AGG - chr1.2:1879785-1879804 None:intergenic 35.0%
! ATTATTTCTCCCTTGGACTT+TGG + chr1.2:1881067-1881086 MS.gene24236:CDS 35.0%
! TCTTTTGCATGCATATGTCA+AGG + chr1.2:1880129-1880148 MS.gene24236:intron 35.0%
! TGACAATGTCATTAGCTTGA+GGG - chr1.2:1879784-1879803 None:intergenic 35.0%
! TTCAATAGTTGCATTTGGTG+GGG - chr1.2:1880714-1880733 None:intergenic 35.0%
!! TGTTTTTGTTTGATCCCCTT+AGG - chr1.2:1880688-1880707 None:intergenic 35.0%
!!! ATTCTTTTGAAACAGAGTGG+AGG + chr1.2:1880614-1880633 MS.gene24236:intron 35.0%
AAATCAATGTGCCCAAGATC+AGG + chr1.2:1881034-1881053 MS.gene24236:CDS 40.0%
AATCACTTCAAAACCTCGGA+CGG - chr1.2:1880269-1880288 None:intergenic 40.0%
AGAGACAAACACACACATCT+AGG - chr1.2:1880555-1880574 None:intergenic 40.0%
ATATTGTCACCACCTGATCT+TGG - chr1.2:1881049-1881068 None:intergenic 40.0%
ATTTGAAAGTTCCACCTGAG+AGG - chr1.2:1880790-1880809 None:intergenic 40.0%
CAACAAGGTCTACTTCATCA+AGG - chr1.2:1880766-1880785 None:intergenic 40.0%
CCAAAGTGAAAATCATGGAC+AGG - chr1.2:1879686-1879705 None:intergenic 40.0%
CCACCAAATGCAACTATTGA+AGG + chr1.2:1880713-1880732 MS.gene24236:CDS 40.0%
CCTTCAATAGTTGCATTTGG+TGG - chr1.2:1880716-1880735 None:intergenic 40.0%
GCCTTGTCTATGATCAAGTT+GGG + chr1.2:1881247-1881266 MS.gene24236:CDS 40.0%
TATTGTCACCACCTGATCTT+GGG - chr1.2:1881048-1881067 None:intergenic 40.0%
TCCAAAAGACATTCCTCTAG+TGG - chr1.2:1879732-1879751 None:intergenic 40.0%
TGACATTGTCATGTCAGTCT+TGG + chr1.2:1879793-1879812 MS.gene24236:CDS 40.0%
TGCCTTGTCTATGATCAAGT+TGG + chr1.2:1881246-1881265 MS.gene24236:CDS 40.0%
TTTGAAAGTTCCACCTGAGA+GGG - chr1.2:1880789-1880808 None:intergenic 40.0%
TTTGAGTCTCTCCTTCCTAA+TGG - chr1.2:1880656-1880675 None:intergenic 40.0%
! ACCACTAGAGGAATGTCTTT+TGG + chr1.2:1879728-1879747 MS.gene24236:CDS 40.0%
! ACTCAAAAACAGCTAGCCTA+AGG + chr1.2:1880669-1880688 MS.gene24236:CDS 40.0%
! CATGATTTTCACTTTGGCTG+GGG + chr1.2:1879689-1879708 MS.gene24236:CDS 40.0%
! CCATGATTTTCACTTTGGCT+GGG + chr1.2:1879688-1879707 MS.gene24236:CDS 40.0%
! CCTGTCCATGATTTTCACTT+TGG + chr1.2:1879683-1879702 MS.gene24236:CDS 40.0%
! CCTTGTCTATGATCAAGTTG+GGG + chr1.2:1881248-1881267 MS.gene24236:CDS 40.0%
! CTCAAAAACAGCTAGCCTAA+GGG + chr1.2:1880670-1880689 MS.gene24236:CDS 40.0%
! CTGCGATGCATCAATTTTGT+TGG + chr1.2:1880192-1880211 MS.gene24236:CDS 40.0%
! TCAAAAACAGCTAGCCTAAG+GGG + chr1.2:1880671-1880690 MS.gene24236:CDS 40.0%
! TCAATAGTTGCATTTGGTGG+GGG - chr1.2:1880713-1880732 None:intergenic 40.0%
! TCCATGATTTTCACTTTGGC+TGG + chr1.2:1879687-1879706 MS.gene24236:CDS 40.0%
! TTCAGATGAAGTGCTTCTCA+CGG + chr1.2:1881153-1881172 MS.gene24236:CDS 40.0%
!! CTGGTTGGTTGTTTCCATTT+TGG - chr1.2:1880979-1880998 None:intergenic 40.0%
AATCATGGACAGGATGAGCA+TGG - chr1.2:1879676-1879695 None:intergenic 45.0%
AGGTGCACATACAATTGGTG+TGG + chr1.2:1880919-1880938 MS.gene24236:intron 45.0%
ATATTGTTGCCCTTGCTGCT+AGG + chr1.2:1880344-1880363 MS.gene24236:CDS 45.0%
ATCATGGACAGGATGAGCAT+GGG - chr1.2:1879675-1879694 None:intergenic 45.0%
CCCAGCCAAAGTGAAAATCA+TGG - chr1.2:1879691-1879710 None:intergenic 45.0%
CCCCAACTTGATCATAGACA+AGG - chr1.2:1881251-1881270 None:intergenic 45.0%
CCTAACAAAAATTCCGTCCG+AGG + chr1.2:1880253-1880272 MS.gene24236:CDS 45.0%
GAAGTACGGTCAAATGTGTC+CGG - chr1.2:1879977-1879996 None:intergenic 45.0%
TAAAACCAGTGAGAGGACGA+AGG - chr1.2:1881276-1881295 None:intergenic 45.0%
TATTGTTGCCCTTGCTGCTA+GGG + chr1.2:1880345-1880364 MS.gene24236:CDS 45.0%
TCGCCATTAAAACCAGTGAG+AGG - chr1.2:1881283-1881302 None:intergenic 45.0%
TCTGCACATGAGACTGTATG+AGG - chr1.2:1880325-1880344 None:intergenic 45.0%
TGTCATGTCAGTCTTGGAGA+AGG + chr1.2:1879799-1879818 MS.gene24236:CDS 45.0%
TGTTAAGGAGACTCGTGACT+TGG + chr1.2:1881180-1881199 MS.gene24236:CDS 45.0%
! CCTCGGACGGAATTTTTGTT+AGG - chr1.2:1880256-1880275 None:intergenic 45.0%
! TCAGATGAAGTGCTTCTCAC+GGG + chr1.2:1881154-1881173 MS.gene24236:CDS 45.0%
!!! CGTCCTCTCACTGGTTTTAA+TGG + chr1.2:1881277-1881296 MS.gene24236:CDS 45.0%
ACTGGGAGCTACCATTAGGA+AGG + chr1.2:1880642-1880661 MS.gene24236:CDS 50.0%
AGGTCTGAGTCGCGACATAA+AGG + chr1.2:1879929-1879948 MS.gene24236:intron 50.0%
ATTGTTGCCCTTGCTGCTAG+GGG + chr1.2:1880346-1880365 MS.gene24236:CDS 50.0%
CCTAATGGTAGCTCCCAGTT+GGG - chr1.2:1880641-1880660 None:intergenic 50.0%
CTTGGAGAAGGCCATTGCTA+AGG + chr1.2:1879811-1879830 MS.gene24236:CDS 50.0%
GCTTCTCACGGGGAATGTTA+AGG + chr1.2:1881165-1881184 MS.gene24236:CDS 50.0%
TCAATGTGCCCAAGATCAGG+TGG + chr1.2:1881037-1881056 MS.gene24236:CDS 50.0%
TCCTAATGGTAGCTCCCAGT+TGG - chr1.2:1880642-1880661 None:intergenic 50.0%
! CAGATGAAGTGCTTCTCACG+GGG + chr1.2:1881155-1881174 MS.gene24236:CDS 50.0%
! CATCATGGTGGAACCACTAG+AGG + chr1.2:1879716-1879735 MS.gene24236:CDS 50.0%
! GATTTTCACTTTGGCTGGGG+TGG + chr1.2:1879692-1879711 MS.gene24236:CDS 50.0%
AACAGAGTGGAGGACCCAAC+TGG + chr1.2:1880624-1880643 MS.gene24236:intron 55.0%
ACAGAGTGGAGGACCCAACT+GGG + chr1.2:1880625-1880644 MS.gene24236:intron 55.0%
AGTGGATCCCCTAGCAGCAA+GGG - chr1.2:1880356-1880375 None:intergenic 55.0%
CCCAACTGGGAGCTACCATT+AGG + chr1.2:1880638-1880657 MS.gene24236:CDS 55.0%
CTTGGGGAGCCAAAGTCCAA+GGG - chr1.2:1881079-1881098 None:intergenic 55.0%
GTAGACCTTGTTGCCCTCTC+AGG + chr1.2:1880773-1880792 MS.gene24236:CDS 55.0%
TCTTGGGGAGCCAAAGTCCA+AGG - chr1.2:1881080-1881099 None:intergenic 55.0%
TTACCTGCACGAAGCAGTCG+TGG - chr1.2:1879874-1879893 None:intergenic 55.0%
TTCCACCTGAGAGGGCAACA+AGG - chr1.2:1880781-1880800 None:intergenic 55.0%
TTTGGCTGGGGTGGTCATCA+TGG + chr1.2:1879701-1879720 MS.gene24236:CDS 55.0%
CAGTGGATCCCCTAGCAGCA+AGG - chr1.2:1880357-1880376 None:intergenic 60.0%
CTTCCACGACTGCTTCGTGC+AGG + chr1.2:1879868-1879887 MS.gene24236:CDS 60.0%
GACCTTGTTGCCCTCTCAGG+TGG + chr1.2:1880776-1880795 MS.gene24236:intron 60.0%
GGGAACCTTCGTCCTCTCAC+TGG + chr1.2:1881268-1881287 MS.gene24236:CDS 60.0%
GGCTGGGGTGGTCATCATGG+TGG + chr1.2:1879704-1879723 MS.gene24236:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 1879617 1881333 1879617 ID=MS.gene24236
chr1.2 mRNA 1879617 1881333 1879617 ID=MS.gene24236.t1;Parent=MS.gene24236
chr1.2 exon 1879617 1879889 1879617 ID=MS.gene24236.t1.exon1;Parent=MS.gene24236.t1
chr1.2 CDS 1879617 1879889 1879617 ID=cds.MS.gene24236.t1;Parent=MS.gene24236.t1
chr1.2 exon 1880190 1880381 1880190 ID=MS.gene24236.t1.exon2;Parent=MS.gene24236.t1
chr1.2 CDS 1880190 1880381 1880190 ID=cds.MS.gene24236.t1;Parent=MS.gene24236.t1
chr1.2 exon 1880629 1880794 1880629 ID=MS.gene24236.t1.exon3;Parent=MS.gene24236.t1
chr1.2 CDS 1880629 1880794 1880629 ID=cds.MS.gene24236.t1;Parent=MS.gene24236.t1
chr1.2 exon 1880921 1881333 1880921 ID=MS.gene24236.t1.exon4;Parent=MS.gene24236.t1
chr1.2 CDS 1880921 1881333 1880921 ID=cds.MS.gene24236.t1;Parent=MS.gene24236.t1
Gene Sequence

>MS.gene24236

ATGTCTTTCACCAAAGTCATTCTTATTGTAGCAGCTTTTCTTTCAGTTACACTCTCCCATGCTCATCCTGTCCATGATTTTCACTTTGGCTGGGGTGGTCATCATGGTGGAACCACTAGAGGAATGTCTTTTGGACTTTCTCCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTCTTGGAGAAGGCCATTGCTAAGGATATCAGAATAGCAGCTTCTCTTCTTCGACTTCACTTCCACGACTGCTTCGTGCAGGTAAATTTCAAACACAATAGCAATACATGTTCTAAATACAGGTCTGAGTCGCGACATAAAGGTTTTTAAGTCTTTGCATTTGTACCGGACACATTTGACCGTACTTCGATATAACATCAAGAATTGCGACCGCAAGTAAAACATAAAATAATATCATAATCATGTATCTAAGCCTTCCTGAATACACGTTCTTAATTTGCCAACAAATTTTGAGAGAAAAAAATAGATTCATTTCATAATCTTTTGCATGCATATGTCAAGGAGCTGAAAAATTTCTCTTTATTTTACTTTTAATGACAGGGCTGCGATGCATCAATTTTGTTGGACGACAGCGCTACAATTGTCAGTGAAAAAAATGGTGGACCTAACAAAAATTCCGTCCGAGGTTTTGAAGTGATTGATGAGATCAAATCTAAGTTGGAACAAGCATGTCCTCATACAGTCTCATGTGCAGATATTGTTGCCCTTGCTGCTAGGGGATCCACTGTTCTTGTAAGAAAAAAACACACATGACTCAAATTGAGATGACCAACTTTTATATACTTTGCATGTCATATACTAAGGGGATATGTTTTTTGCATTGTTGTTAAGAACGAAAAACAAACAATTTTTTAATAGACTATGGTGAAAGAAAATAACATTTTAAGAACAATATGATTAAACCTAGATGTGTGTGTTTGTCTCTCTCTAAATACAAACATGCTTAATTTGAAACTTGATCAATATTCTTTTGAAACAGAGTGGAGGACCCAACTGGGAGCTACCATTAGGAAGGAGAGACTCAAAAACAGCTAGCCTAAGGGGATCAAACAAAAACATTCCCCCACCAAATGCAACTATTGAAGGTCTCTTAACATTTTTCAAGCGTCAAGGCCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGTGGAACTTTCAAATTCTTAACCACATTTTCTATTAGTGTTACATAATATTACTTCTCTGTCTCGTAATAATTGTCACGTTTACACACAAAAATTGTTCTTAAAAGATCGTCACTTTATAATGTAGGTGCACATACAATTGGTGTGGCAAAATGTGCAACATTCAAGCAAAGACTATACAACCAAAATGGAAACAACCAACCAGATTCGAATCTAGAAAAAACATTTTACTTTGGTTTGAAATCAATGTGCCCAAGATCAGGTGGTGACAATATTATTTCTCCCTTGGACTTTGGCTCCCCAAGAATGTTTGATAATACCTATTACAAACTCTTACTTAGGGGAAAAGGATTGCTTAATTCAGATGAAGTGCTTCTCACGGGGAATGTTAAGGAGACTCGTGACTTGGTGAAGAAATATGCACAAGATGAGAGTCTCTTCTTTCAACAATTTGCCTTGTCTATGATCAAGTTGGGGAACCTTCGTCCTCTCACTGGTTTTAATGGCGAAGTTAGAAAGAATTGTCGTCGAGTTAATTAA
Protein sequence

>MS.gene24236.t1

MSFTKVILIVAAFLSVTLSHAHPVHDFHFGWGGHHGGTTRGMSFGLSPQFYQFSCPQANDIVMSVLEKAIAKDIRIAASLLRLHFHDCFVQGCDASILLDDSATIVSEKNGGPNKNSVRGFEVIDEIKSKLEQACPHTVSCADIVALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATIEGLLTFFKRQGLDEVDLVALSGAHTIGVAKCATFKQRLYNQNGNNQPDSNLEKTFYFGLKSMCPRSGGDNIISPLDFGSPRMFDNTYYKLLLRGKGLLNSDEVLLTGNVKETRDLVKKYAQDESLFFQQFALSMIKLGNLRPLTGFNGEVRKNCRRVN