AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27001

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27001.t1 MTR_1g022970 97.983 347 7 0 1 347 1 347 0.0 708
MS.gene27001.t1 MTR_8g076820 62.987 308 113 1 40 347 24 330 3.19e-140 401
MS.gene27001.t1 MTR_5g021060 62.583 302 112 1 46 347 30 330 6.08e-139 397
MS.gene27001.t1 MTR_4g122640 49.568 347 164 4 1 347 1 336 8.52e-112 329
MS.gene27001.t1 MTR_3g072190 52.649 302 134 2 46 347 26 318 1.70e-109 322
MS.gene27001.t1 MTR_5g014100 52.229 314 145 3 38 347 19 331 3.31e-108 319
MS.gene27001.t1 MTR_5g074970 53.268 306 130 4 46 347 30 326 1.55e-107 317
MS.gene27001.t1 MTR_4g029170 51.803 305 136 4 45 347 26 321 1.94e-107 317
MS.gene27001.t1 MTR_3g466200 52.459 305 133 4 46 347 25 320 2.17e-107 317
MS.gene27001.t1 MTR_3g094650 50.000 304 141 3 46 347 28 322 5.54e-105 311
MS.gene27001.t1 MTR_2g084020 51.325 302 139 2 46 347 25 318 1.96e-104 309
MS.gene27001.t1 MTR_2g084010 51.325 302 139 2 46 347 25 318 2.20e-104 309
MS.gene27001.t1 MTR_7g072510 47.712 306 151 2 42 347 16 312 2.30e-104 309
MS.gene27001.t1 MTR_4g029180 52.000 300 133 4 50 347 31 321 8.79e-104 308
MS.gene27001.t1 MTR_2g029820 48.397 312 161 0 36 347 19 330 1.61e-103 308
MS.gene27001.t1 MTR_2g084000 50.331 302 142 2 46 347 26 319 2.42e-103 306
MS.gene27001.t1 MTR_2g084080 50.000 302 142 2 46 347 25 317 1.12e-102 305
MS.gene27001.t1 MTR_2g029830 49.669 302 152 0 46 347 28 329 1.36e-102 306
MS.gene27001.t1 MTR_2g029815 48.675 302 155 0 46 347 29 330 3.11e-102 305
MS.gene27001.t1 MTR_5g083860 49.342 304 143 3 46 347 31 325 3.26e-102 304
MS.gene27001.t1 MTR_2g029560 48.344 302 156 0 46 347 24 325 4.76e-102 304
MS.gene27001.t1 MTR_2g029750 48.397 312 161 0 36 347 19 330 7.17e-102 304
MS.gene27001.t1 MTR_1g054205 48.515 303 155 1 46 347 24 326 9.17e-102 303
MS.gene27001.t1 MTR_7g093370 47.855 303 157 1 46 347 69 371 2.22e-101 303
MS.gene27001.t1 MTR_4g029200 50.000 302 142 2 46 347 46 338 2.66e-101 302
MS.gene27001.t1 MTR_2g029740 48.718 312 160 0 36 347 19 330 2.76e-101 303
MS.gene27001.t1 MTR_2g029860 48.675 302 155 0 46 347 29 330 8.28e-101 301
MS.gene27001.t1 MTR_2g040000 49.515 309 151 2 42 347 25 331 2.61e-100 299
MS.gene27001.t1 MTR_2g084110 49.338 302 144 2 46 347 25 317 2.76e-100 299
MS.gene27001.t1 MTR_5g049280 47.213 305 158 3 46 347 33 337 4.75e-100 299
MS.gene27001.t1 MTR_5g074760 48.525 305 146 4 46 347 25 321 5.42e-100 298
MS.gene27001.t1 MTR_2g029730 48.013 302 157 0 46 347 25 326 7.55e-100 298
MS.gene27001.t1 MTR_7g072480 50.000 310 138 4 42 347 20 316 1.40e-99 297
MS.gene27001.t1 MTR_5g074860 49.013 304 144 4 46 346 29 324 1.44e-99 297
MS.gene27001.t1 MTR_4g029190 49.032 310 146 4 41 347 40 340 1.89e-99 297
MS.gene27001.t1 MTR_5g074740 48.197 305 147 4 46 347 25 321 2.80e-99 296
MS.gene27001.t1 MTR_3g094670 49.342 304 143 3 46 347 28 322 2.80e-99 296
MS.gene27001.t1 MTR_2g029850 48.344 302 156 0 46 347 29 330 5.20e-99 297
MS.gene27001.t1 MTR_2g029910 48.684 304 153 2 46 347 30 332 7.05e-99 296
MS.gene27001.t1 MTR_2g028980 49.338 302 153 0 46 347 29 330 1.77e-98 295
MS.gene27001.t1 MTR_2g029800 47.351 302 159 0 46 347 29 330 2.00e-98 295
MS.gene27001.t1 MTR_4g125940 48.684 304 152 2 46 347 28 329 2.46e-98 294
MS.gene27001.t1 MTR_3g094630 49.671 304 142 3 46 347 28 322 4.95e-98 293
MS.gene27001.t1 MTR_5g017850 50.836 299 143 3 50 347 31 326 9.38e-98 293
MS.gene27001.t1 MTR_2g084090 48.845 303 145 3 46 347 25 318 1.17e-97 292
MS.gene27001.t1 MTR_5g074710 48.525 305 146 4 46 347 25 321 1.22e-97 292
MS.gene27001.t1 MTR_7g026990 48.322 298 144 3 50 347 35 322 3.28e-96 288
MS.gene27001.t1 MTR_5g017860 49.833 299 146 3 50 347 31 326 6.10e-95 285
MS.gene27001.t1 MTR_4g030890 47.097 310 159 3 38 347 92 396 9.14e-95 288
MS.gene27001.t1 MTR_4g083710 46.885 305 152 3 46 347 27 324 1.06e-93 282
MS.gene27001.t1 MTR_4g031140 46.557 305 158 3 43 347 25 324 1.28e-93 283
MS.gene27001.t1 MTR_1g115900 47.039 304 150 4 46 347 27 321 2.58e-93 281
MS.gene27001.t1 MTR_3g466180 48.344 302 147 2 46 347 31 323 9.05e-93 280
MS.gene27001.t1 MTR_3g072190 51.351 259 117 2 89 347 2 251 1.16e-91 274
MS.gene27001.t1 MTR_4g125940 50.000 276 134 2 74 347 1 274 1.17e-91 275
MS.gene27001.t1 MTR_3g467600 45.246 305 157 3 46 347 27 324 1.50e-90 274
MS.gene27001.t1 MTR_4g074995 45.574 305 143 4 46 347 24 308 6.22e-88 267
MS.gene27001.t1 MTR_4g074990 44.590 305 143 3 46 347 24 305 2.33e-85 260
MS.gene27001.t1 MTR_1g101830 45.364 302 159 5 46 347 27 322 2.22e-83 256
MS.gene27001.t1 MTR_2g029830 48.249 257 133 0 91 347 5 261 1.73e-82 252
MS.gene27001.t1 MTR_0155s0040 43.564 303 158 7 45 347 26 315 1.04e-81 251
MS.gene27001.t1 MTR_3g092990 43.813 299 165 3 50 347 30 326 1.87e-81 251
MS.gene27001.t1 MTR_5g022870 44.444 306 156 7 45 347 22 316 3.38e-81 250
MS.gene27001.t1 MTR_2g088770 45.333 300 158 5 50 347 30 325 1.11e-80 249
MS.gene27001.t1 MTR_1g086320 42.675 314 174 3 38 347 22 333 3.52e-79 245
MS.gene27001.t1 MTR_4g133800 43.960 298 156 6 51 347 46 333 7.73e-79 244
MS.gene27001.t1 MTR_8g075100 42.623 305 161 7 46 347 26 319 1.00e-78 244
MS.gene27001.t1 MTR_1g077000 41.722 302 163 6 46 347 39 327 1.93e-78 243
MS.gene27001.t1 MTR_2g008710 44.040 302 158 5 50 347 31 325 5.18e-78 242
MS.gene27001.t1 MTR_1g086490 41.121 321 176 4 38 347 22 340 5.92e-77 240
MS.gene27001.t1 MTR_4g046713 42.244 303 171 3 46 347 27 326 7.47e-77 239
MS.gene27001.t1 MTR_4g074980 43.046 302 140 5 46 347 25 294 1.12e-76 238
MS.gene27001.t1 MTR_1g038680 42.053 302 169 5 50 347 33 332 2.42e-76 238
MS.gene27001.t1 MTR_5g074860 41.776 304 127 4 46 346 29 285 1.44e-75 234
MS.gene27001.t1 MTR_1g025980 42.484 306 167 6 42 346 20 317 5.49e-75 234
MS.gene27001.t1 MTR_7g107520 42.395 309 170 5 41 347 18 320 1.15e-74 233
MS.gene27001.t1 MTR_4g074980 48.936 235 111 2 46 277 25 253 3.47e-74 230
MS.gene27001.t1 MTR_7g086820 41.946 298 164 6 50 347 24 312 5.52e-74 231
MS.gene27001.t1 MTR_6g027440 42.667 300 160 6 50 347 25 314 1.94e-73 230
MS.gene27001.t1 MTR_2g437770 42.574 303 162 8 46 347 50 341 4.26e-73 230
MS.gene27001.t1 MTR_6g043280 40.741 324 172 7 27 347 26 332 2.09e-72 228
MS.gene27001.t1 MTR_4g132490 39.617 313 177 5 42 347 20 327 4.09e-71 224
MS.gene27001.t1 MTR_7g086870 41.275 298 163 6 50 347 26 311 1.09e-70 223
MS.gene27001.t1 MTR_4g114210 42.405 316 170 5 37 347 12 320 1.75e-70 223
MS.gene27001.t1 MTR_3g092990 41.472 299 161 4 50 347 30 315 1.41e-69 220
MS.gene27001.t1 MTR_4g087965 40.594 303 173 5 46 343 42 342 1.92e-69 221
MS.gene27001.t1 MTR_7g029030 38.511 309 170 4 46 347 25 320 2.33e-69 220
MS.gene27001.t1 MTR_2g067440 39.577 331 166 6 46 346 60 386 3.24e-67 216
MS.gene27001.t1 MTR_6g043240 40.984 305 164 7 45 347 41 331 2.42e-66 213
MS.gene27001.t1 MTR_2g078610 39.940 333 165 7 46 346 76 405 7.08e-66 213
MS.gene27001.t1 MTR_2g077990 39.640 333 166 7 46 346 76 405 5.72e-64 209
MS.gene27001.t1 MTR_6g043460 40.000 300 169 5 45 343 35 324 1.14e-63 206
MS.gene27001.t1 MTR_5g016010 34.393 346 203 5 1 343 1 325 1.04e-62 203
MS.gene27001.t1 MTR_1g009750 36.721 305 187 4 46 347 27 328 1.64e-62 202
MS.gene27001.t1 MTR_8g062780 38.689 305 181 5 46 347 23 324 2.06e-61 199
MS.gene27001.t1 MTR_2g099175 35.831 307 185 4 46 347 36 335 5.23e-61 199
MS.gene27001.t1 MTR_4g095450 37.542 301 178 4 46 343 27 320 1.28e-60 197
MS.gene27001.t1 MTR_3g105790 38.816 304 178 4 46 347 25 322 1.54e-60 197
MS.gene27001.t1 MTR_1g066380 38.689 305 176 4 46 347 27 323 7.20e-60 196
MS.gene27001.t1 MTR_2g078280 39.375 320 159 7 46 333 76 392 1.06e-59 197
MS.gene27001.t1 MTR_2g008160 40.514 311 157 8 50 347 28 323 2.01e-59 194
MS.gene27001.t1 MTR_4g127670 37.582 306 181 5 46 347 24 323 2.24e-59 194
MS.gene27001.t1 MTR_1g090760 37.049 305 187 4 46 347 28 330 3.10e-59 194
MS.gene27001.t1 MTR_0147s0010 37.346 324 167 4 43 346 74 381 6.76e-59 194
MS.gene27001.t1 MTR_1g066710 37.705 305 179 4 46 347 27 323 1.66e-58 192
MS.gene27001.t1 MTR_5g074700 42.672 232 108 5 119 347 5 214 5.85e-57 184
MS.gene27001.t1 MTR_1g066680 38.436 307 173 6 46 347 27 322 8.13e-57 187
MS.gene27001.t1 MTR_1g066640 38.361 305 177 4 46 347 27 323 8.18e-57 187
MS.gene27001.t1 MTR_5g033470 37.829 304 180 7 50 347 77 377 8.49e-57 189
MS.gene27001.t1 MTR_2g067450 39.216 306 174 7 46 346 11 309 3.14e-56 186
MS.gene27001.t1 MTR_2g008730 36.755 302 156 5 50 347 31 301 3.74e-55 182
MS.gene27001.t1 MTR_0286s0010 34.967 306 190 6 46 347 34 334 9.75e-55 182
MS.gene27001.t1 MTR_6g008075 34.967 306 190 6 46 347 34 334 9.75e-55 182
MS.gene27001.t1 MTR_3g072210 47.668 193 90 4 157 347 55 238 2.54e-53 176
MS.gene27001.t1 MTR_4g132110 35.621 306 178 5 45 343 31 324 2.53e-52 176
MS.gene27001.t1 MTR_1g009750 33.333 303 183 4 46 347 27 311 1.18e-51 174
MS.gene27001.t1 MTR_1g066380 39.464 261 147 4 90 347 3 255 3.92e-50 168
MS.gene27001.t1 MTR_4g132110 35.048 311 178 6 45 343 31 329 5.08e-50 170
MS.gene27001.t1 MTR_2g008160 36.452 310 136 7 50 347 28 288 5.91e-48 163
MS.gene27001.t1 MTR_3g105790 39.662 237 139 3 113 347 12 246 2.33e-44 153
MS.gene27001.t1 MTR_2g008160 46.629 178 87 4 50 225 28 199 7.74e-43 147
MS.gene27001.t1 MTR_7g072490 36.948 249 94 3 92 340 2 187 1.13e-42 147
MS.gene27001.t1 MTR_2g029880 41.146 192 99 2 158 347 9 188 2.12e-41 144
MS.gene27001.t1 MTR_3g072260 58.716 109 45 0 46 154 26 134 6.55e-39 135
MS.gene27001.t1 MTR_3g462850 46.099 141 73 3 210 347 9 149 3.59e-34 123
MS.gene27001.t1 MTR_2g077980 32.246 276 147 6 108 346 11 283 7.90e-29 113
MS.gene27001.t1 MTR_2g078560 33.186 226 118 4 152 346 96 319 5.51e-28 111
MS.gene27001.t1 MTR_7g086790 35.979 189 99 5 93 281 17 183 1.89e-25 101
MS.gene27001.t1 MTR_1g089005 42.017 119 62 2 46 158 15 132 3.11e-24 97.4
MS.gene27001.t1 MTR_6g048160 64.789 71 21 2 85 155 22 88 1.64e-22 90.5
MS.gene27001.t1 MTR_4g114220 46.847 111 41 4 72 182 29 121 1.23e-19 84.3
MS.gene27001.t1 MTR_5g074770 44.086 93 51 1 254 346 17 108 2.79e-19 82.4
MS.gene27001.t1 MTR_3g107060 28.269 283 127 9 61 328 91 312 3.11e-18 84.7
MS.gene27001.t1 MTR_7g086810 36.290 124 52 2 42 164 1 98 1.07e-17 81.6
MS.gene27001.t1 MTR_4g031040 32.759 174 73 3 105 278 1 130 1.27e-17 79.0
MS.gene27001.t1 MTR_2g029930 44.444 90 25 2 46 124 19 94 3.46e-17 76.6
MS.gene27001.t1 MTR_5g058120 33.129 163 96 4 181 343 6 155 1.62e-16 78.6
MS.gene27001.t1 MTR_1g098320 47.368 76 38 1 268 343 47 120 9.02e-16 73.9
MS.gene27001.t1 MTR_4g012865 49.296 71 36 0 43 113 74 144 6.78e-15 71.6
MS.gene27001.t1 MTR_7g086785 44.578 83 45 1 89 171 1 82 8.05e-15 71.2
MS.gene27001.t1 MTR_7g107500 43.023 86 46 2 262 347 15 97 1.59e-14 68.9
MS.gene27001.t1 MTR_0147s0040 41.333 75 42 1 272 346 10 82 3.68e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27001.t1 AT1G44970 71.225 351 92 4 1 347 1 346 1.67e-177 496
MS.gene27001.t1 AT2G18150 56.358 346 136 4 2 347 6 336 2.96e-140 401
MS.gene27001.t1 AT4G36430 61.258 302 116 1 46 347 30 330 3.33e-140 401
MS.gene27001.t1 AT5G66390 61.921 302 114 1 46 347 33 333 5.05e-139 398
MS.gene27001.t1 AT2G18140 54.030 335 145 2 13 347 10 335 2.45e-130 376
MS.gene27001.t1 AT3G50990 57.947 302 126 1 46 347 41 341 5.49e-126 365
MS.gene27001.t1 AT5G06720 50.331 302 150 0 46 347 32 333 2.67e-110 325
MS.gene27001.t1 AT2G35380 53.871 310 123 4 50 347 34 335 6.25e-106 314
MS.gene27001.t1 AT2G38390 50.165 303 150 1 46 347 31 333 8.82e-104 309
MS.gene27001.t1 AT5G06730 47.351 302 159 0 46 347 33 334 1.06e-103 309
MS.gene27001.t1 AT4G16270 50.000 322 148 7 32 347 34 348 6.91e-102 304
MS.gene27001.t1 AT5G05340 47.368 304 149 3 46 347 30 324 4.91e-101 301
MS.gene27001.t1 AT1G49570 47.953 342 172 4 6 343 7 346 9.37e-101 301
MS.gene27001.t1 AT5G19890 49.838 309 147 4 41 347 25 327 4.67e-100 298
MS.gene27001.t1 AT2G38380 49.505 303 152 1 46 347 31 333 6.85e-100 299
MS.gene27001.t1 AT2G22420 48.344 302 151 3 46 347 23 319 1.68e-99 297
MS.gene27001.t1 AT5G58400 47.869 305 147 4 46 347 30 325 4.94e-99 296
MS.gene27001.t1 AT4G08780 48.026 304 156 2 46 347 24 327 6.17e-99 296
MS.gene27001.t1 AT4G08770 48.026 304 156 2 46 347 24 327 1.26e-98 296
MS.gene27001.t1 AT5G58390 50.820 305 138 4 46 347 21 316 8.05e-96 287
MS.gene27001.t1 AT3G32980 46.711 304 160 2 46 347 31 334 5.45e-95 286
MS.gene27001.t1 AT3G49110 47.368 304 158 2 46 347 33 336 2.13e-94 285
MS.gene27001.t1 AT1G14550 48.845 303 147 3 46 347 26 321 7.97e-94 282
MS.gene27001.t1 AT3G49120 46.711 304 160 2 46 347 32 335 1.02e-92 281
MS.gene27001.t1 AT1G68850 43.450 313 173 3 39 347 23 335 1.19e-92 280
MS.gene27001.t1 AT1G14540 45.695 302 157 2 46 347 21 315 2.50e-90 273
MS.gene27001.t1 AT3G03670 44.147 299 164 2 49 347 26 321 1.65e-86 264
MS.gene27001.t1 AT5G19880 44.262 305 167 2 46 347 25 329 3.35e-86 263
MS.gene27001.t1 AT5G51890 44.918 305 159 6 45 347 25 322 6.52e-83 254
MS.gene27001.t1 AT5G42180 44.884 303 158 6 45 346 22 316 1.64e-81 251
MS.gene27001.t1 AT5G64120 40.058 347 189 7 1 347 1 328 3.44e-81 250
MS.gene27001.t1 AT5G17820 42.282 298 160 5 50 347 28 313 4.52e-81 249
MS.gene27001.t1 AT1G71695 44.444 306 158 6 45 347 43 339 2.44e-80 249
MS.gene27001.t1 AT1G05260 43.894 303 166 4 46 347 26 325 2.97e-80 248
MS.gene27001.t1 AT2G35380 51.765 255 103 4 105 347 1 247 7.27e-80 244
MS.gene27001.t1 AT5G17820 42.282 298 160 5 50 347 81 366 1.08e-79 248
MS.gene27001.t1 AT4G33420 43.894 303 157 6 45 347 36 325 1.27e-78 244
MS.gene27001.t1 AT4G33420 43.894 303 157 6 45 347 83 372 5.23e-78 244
MS.gene27001.t1 AT4G11290 43.333 300 166 3 50 347 29 326 6.37e-77 239
MS.gene27001.t1 AT3G21770 42.258 310 171 5 37 343 20 324 1.45e-76 239
MS.gene27001.t1 AT5G15180 42.434 304 169 5 45 347 31 329 7.59e-75 234
MS.gene27001.t1 AT2G41480 42.904 303 161 5 50 347 33 328 1.85e-72 228
MS.gene27001.t1 AT1G05240 40.864 301 170 5 46 343 26 321 2.88e-72 228
MS.gene27001.t1 AT1G05250 40.864 301 170 5 46 343 26 321 2.88e-72 228
MS.gene27001.t1 AT5G39580 42.140 299 164 6 50 347 29 319 1.10e-70 223
MS.gene27001.t1 AT4G26010 41.137 299 160 6 50 347 26 309 3.49e-70 221
MS.gene27001.t1 AT4G26010 41.137 299 160 6 50 347 54 337 6.55e-70 222
MS.gene27001.t1 AT3G01190 40.656 305 175 5 43 347 23 321 6.97e-70 221
MS.gene27001.t1 AT2G18980 40.000 305 174 4 46 347 25 323 5.15e-69 219
MS.gene27001.t1 AT4G25980 40.594 303 169 5 50 347 30 326 5.68e-69 219
MS.gene27001.t1 AT5G64100 40.864 301 165 7 50 347 41 331 1.97e-68 218
MS.gene27001.t1 AT2G39040 42.395 309 167 6 46 347 46 350 2.12e-68 218
MS.gene27001.t1 AT5G64110 42.193 301 163 5 50 347 38 330 3.54e-68 217
MS.gene27001.t1 AT4G30170 39.032 310 178 5 42 347 23 325 4.05e-68 217
MS.gene27001.t1 AT4G33870 37.048 332 171 4 50 346 72 400 2.63e-67 217
MS.gene27001.t1 AT1G30870 42.295 305 163 7 46 347 51 345 7.23e-67 214
MS.gene27001.t1 AT4G31760 40.065 307 176 3 43 347 26 326 9.77e-66 211
MS.gene27001.t1 AT4G37530 38.158 304 183 3 43 343 24 325 8.95e-65 208
MS.gene27001.t1 AT4G37520 37.209 301 184 3 46 343 27 325 2.70e-63 204
MS.gene27001.t1 AT3G49960 36.721 305 188 3 46 347 27 329 5.54e-63 204
MS.gene27001.t1 AT5G40150 40.132 304 173 5 46 347 32 328 2.56e-62 202
MS.gene27001.t1 AT2G34060 38.158 304 181 5 46 344 42 343 2.86e-62 202
MS.gene27001.t1 AT1G77100 38.486 317 175 7 36 347 18 319 2.98e-62 201
MS.gene27001.t1 AT5G47000 38.636 308 173 7 46 347 33 330 1.56e-61 200
MS.gene27001.t1 AT4G37520 36.877 301 182 4 46 343 27 322 1.60e-61 200
MS.gene27001.t1 AT5G67400 37.049 305 187 3 46 347 27 329 6.29e-61 198
MS.gene27001.t1 AT2G24800 39.344 305 176 5 46 347 31 329 2.16e-59 194
MS.gene27001.t1 AT3G28200 37.171 304 181 4 46 347 21 316 7.14e-59 192
MS.gene27001.t1 AT1G24110 37.908 306 181 7 46 347 22 322 8.92e-59 192
MS.gene27001.t1 AT5G14130 35.644 303 190 4 46 347 32 330 2.00e-58 192
MS.gene27001.t1 AT5G22410 38.333 300 171 8 50 344 32 322 3.66e-58 191
MS.gene27001.t1 AT1G34510 37.793 299 170 6 50 347 26 309 3.77e-58 191
MS.gene27001.t1 AT4G17690 37.377 305 180 5 46 347 26 322 4.49e-58 191
MS.gene27001.t1 AT5G14130 35.644 303 190 4 46 347 73 371 4.94e-58 192
MS.gene27001.t1 AT3G17070 36.624 314 177 7 45 347 37 339 4.24e-57 189
MS.gene27001.t1 AT2G37130 38.079 302 175 5 50 347 3 296 1.98e-56 186
MS.gene27001.t1 AT5G24070 33.846 325 194 6 36 347 19 335 2.19e-56 187
MS.gene27001.t1 AT2G43480 35.275 309 185 6 46 347 35 335 2.20e-56 187
MS.gene27001.t1 AT2G37130 38.312 308 174 6 46 347 30 327 2.44e-56 186
MS.gene27001.t1 AT4G21960 37.419 310 175 5 45 347 30 327 3.13e-55 184
MS.gene27001.t1 AT4G37530 38.281 256 155 2 43 295 24 279 4.52e-55 182
MS.gene27001.t1 AT4G25980 47.561 164 82 3 50 213 75 234 1.35e-43 152
MS.gene27001.t1 AT3G17070 35.055 271 153 8 88 347 18 276 1.16e-42 149
MS.gene27001.t1 AT5G39580 45.455 165 85 3 50 214 29 188 2.56e-38 137
MS.gene27001.t1 AT2G24800 39.109 202 108 3 46 247 31 217 3.46e-36 131
MS.gene27001.t1 AT4G32320 29.930 284 123 9 62 328 97 321 2.08e-20 90.9
MS.gene27001.t1 AT3G42570 36.082 97 61 1 118 213 53 149 1.02e-13 68.6
MS.gene27001.t1 AT4G08390 26.394 269 144 10 80 329 127 360 5.76e-12 66.6
MS.gene27001.t1 AT4G08390 26.394 269 144 10 80 329 127 360 5.76e-12 66.6
MS.gene27001.t1 AT4G08390 26.394 269 144 10 80 329 127 360 5.76e-12 66.6
MS.gene27001.t1 AT4G08390 26.394 269 144 10 80 329 126 359 5.85e-12 66.6

Find 74 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGTTGGTTGTTTCCATTT+TGG 0.258817 1.3:-2323788 None:intergenic
CGTAAGTAAGAGTTTGTAAT+AGG 0.276037 1.3:-2323925 None:intergenic
ACCACTAGAGGAATGTCTTT+TGG 0.298662 1.3:+2322395 MS.gene27001:CDS
AGGTATTATCAAACATTCTT+GGG 0.320019 1.3:-2323905 None:intergenic
CAAAGACTATACAACCAAAA+TGG 0.350393 1.3:+2323774 MS.gene27001:CDS
ATTATTTCTCCCTTGGACTT+TGG 0.353163 1.3:+2323879 MS.gene27001:CDS
CCACCAAATGCCACTGTTGA+AGG 0.354212 1.3:+2323500 MS.gene27001:CDS
TTTGAGTCTCTCCTTCCTAA+TGG 0.355118 1.3:-2323440 None:intergenic
TATTACAAACTCTTACTTAC+GGG 0.362436 1.3:+2323927 MS.gene27001:CDS
TAGGTATTATCAAACATTCT+TGG 0.367240 1.3:-2323906 None:intergenic
GCCTTGTCTATGATCAAGTT+GGG 0.368870 1.3:+2324059 MS.gene27001:CDS
ATATTGTTGCGCTTGCTGCT+AGG 0.380595 1.3:+2323109 MS.gene27001:CDS
TTTGGCTGGGGTGGTCATCA+TGG 0.381646 1.3:+2322368 MS.gene27001:CDS
AACAGAGTGGAGGACCTAAC+TGG 0.382219 1.3:+2323411 MS.gene27001:intron
CCTTCAACAGTGGCATTTGG+TGG 0.391076 1.3:-2323500 None:intergenic
GTAGACCTTGTTGCCCTCTC+AGG 0.409416 1.3:+2323560 MS.gene27001:CDS
AGGCCTTCAACAGTGGCATT+TGG 0.409951 1.3:-2323503 None:intergenic
AAACTCTTACTTACGGGAAA+AGG 0.413427 1.3:+2323933 MS.gene27001:CDS
TATTGTTGCGCTTGCTGCTA+GGG 0.418982 1.3:+2323110 MS.gene27001:CDS
TGACAACATTATTTCTCCCT+TGG 0.436794 1.3:+2323872 MS.gene27001:CDS
CTATTACAAACTCTTACTTA+CGG 0.441120 1.3:+2323926 MS.gene27001:CDS
ATGTTGTCACCACCTGATCT+TGG 0.448426 1.3:-2323858 None:intergenic
TGATGAAATCAAATCTAAGT+TGG 0.449163 1.3:+2323053 MS.gene27001:CDS
AAATCAATGTGCCCAAGATC+AGG 0.449302 1.3:+2323846 MS.gene27001:CDS
GGGAACCTTCGTCCTCTCAC+TGG 0.462709 1.3:+2324080 MS.gene27001:CDS
CCTAATGGTAGCTCCCAGTT+AGG 0.468206 1.3:-2323425 None:intergenic
TGCCTTGTCTATGATCAAGT+TGG 0.474042 1.3:+2324058 MS.gene27001:CDS
AATGTAGGTGCACATACAAT+TGG 0.478313 1.3:+2323726 MS.gene27001:intron
TGTTGTCACCACCTGATCTT+GGG 0.480354 1.3:-2323857 None:intergenic
TTTCTAGATTCGAATCTGGT+TGG 0.488001 1.3:-2323803 None:intergenic
CTTCAACAGTGGCATTTGGT+GGG 0.489391 1.3:-2323499 None:intergenic
TTCAACAGTGGCATTTGGTG+GGG 0.490695 1.3:-2323498 None:intergenic
CCTAACTGGGAGCTACCATT+AGG 0.493079 1.3:+2323425 MS.gene27001:CDS
TGACATTGTCATGTCAGTCT+TGG 0.493447 1.3:+2322460 MS.gene27001:CDS
TCAACAGTGGCATTTGGTGG+GGG 0.500128 1.3:-2323497 None:intergenic
TCAGATGAAGTGCTTCTCAC+AGG 0.521489 1.3:+2323966 MS.gene27001:CDS
TGCAACAAGAAGAATGACTT+TGG 0.522544 1.3:-2322294 None:intergenic
TGACAATGTCATTAGCTTGA+GGG 0.524979 1.3:-2322448 None:intergenic
TTTGAAAGTTCCACCTGAGA+GGG 0.537314 1.3:-2323573 None:intergenic
CATGAAAACTGATAGAATTG+AGG 0.540572 1.3:-2322425 None:intergenic
TGTTAAGAGGCCTTCAACAG+TGG 0.542269 1.3:-2323510 None:intergenic
CCAAAGTGAAAATCATGGAC+AGG 0.542594 1.3:-2322350 None:intergenic
CCCAGCCAAAGTGAAAATCA+TGG 0.562562 1.3:-2322355 None:intergenic
GGCTGGGGTGGTCATCATGG+TGG 0.563986 1.3:+2322371 MS.gene27001:CDS
CTTGGAGAAGGCCATTGCTA+AGG 0.567799 1.3:+2322478 MS.gene27001:CDS
TGTTAAAGAGACTCGTGACT+TGG 0.574422 1.3:+2323992 MS.gene27001:CDS
AATCATGGACAGGATGAGCA+TGG 0.575254 1.3:-2322340 None:intergenic
AATCACTTCAAAACCTCGAA+CGG 0.577972 1.3:-2323031 None:intergenic
TCCAAAAGACATTCCTCTAG+TGG 0.581773 1.3:-2322396 None:intergenic
TCTTGGGGAACCAAAGTCCA+AGG 0.581851 1.3:-2323889 None:intergenic
ACAGAGTGGAGGACCTAACT+GGG 0.585401 1.3:+2323412 MS.gene27001:intron
ATTGTTGCGCTTGCTGCTAG+GGG 0.587923 1.3:+2323111 MS.gene27001:CDS
CCTTGTCTATGATCAAGTTG+GGG 0.590007 1.3:+2324060 MS.gene27001:CDS
CAGATGAAGTGCTTCTCACA+GGG 0.590201 1.3:+2323967 MS.gene27001:CDS
ATGACAATGTCATTAGCTTG+AGG 0.594591 1.3:-2322449 None:intergenic
CAACAAGGTCTACTTCATCA+AGG 0.594873 1.3:-2323550 None:intergenic
GGTATTATCAAACATTCTTG+GGG 0.598190 1.3:-2323904 None:intergenic
ATCATGGACAGGATGAGCAT+GGG 0.599454 1.3:-2322339 None:intergenic
CATCATGGTGGAACCACTAG+AGG 0.601048 1.3:+2322383 MS.gene27001:CDS
CATTGCTAAGGATATCAGAA+TGG 0.613764 1.3:+2322490 MS.gene27001:CDS
CCCCAACTTGATCATAGACA+AGG 0.616517 1.3:-2324060 None:intergenic
TGTCATGTCAGTCTTGGAGA+AGG 0.621040 1.3:+2322466 MS.gene27001:CDS
ATTTGAAAGTTCCACCTGAG+AGG 0.625792 1.3:-2323574 None:intergenic
ACTGGGAGCTACCATTAGGA+AGG 0.633174 1.3:+2323429 MS.gene27001:CDS
TTCCACCTGAGAGGGCAACA+AGG 0.641016 1.3:-2323565 None:intergenic
CATTCTGATATCCTTAGCAA+TGG 0.641247 1.3:-2322489 None:intergenic
TCAATGTGCCCAAGATCAGG+TGG 0.661889 1.3:+2323849 MS.gene27001:CDS
TTACCTGCACAAAACAGTCG+TGG 0.663163 1.3:-2322538 None:intergenic
CTTGGGGAACCAAAGTCCAA+GGG 0.684174 1.3:-2323888 None:intergenic
AATGACTTTGGTGAAAGACA+TGG 0.695046 1.3:-2322282 None:intergenic
TCGCCATTAAAACCAGTGAG+AGG 0.697253 1.3:-2324092 None:intergenic
TAAAACCAGTGAGAGGACGA+AGG 0.705812 1.3:-2324085 None:intergenic
AGGTGCACATACAATTGGTG+TGG 0.734240 1.3:+2323731 MS.gene27001:intron
TCTGCACATGAGACTGTACG+AGG 0.748153 1.3:-2323087 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAGATTCATTTCATA+AGG + chr1.3:2322776-2322795 MS.gene27001:intron 15.0%
!! ACCATAGTCTATTAAAAAAT+TGG - chr1.3:2323262-2323281 None:intergenic 20.0%
!! TGTTTCTTTCTGTATATATA+AGG + chr1.3:2323330-2323349 MS.gene27001:intron 20.0%
!! TTGCATATGTTATATACTTA+GGG + chr1.3:2323198-2323217 MS.gene27001:intron 20.0%
!! TTTGCATATGTTATATACTT+AGG + chr1.3:2323197-2323216 MS.gene27001:intron 20.0%
!!! ACCAATTTTTTAATAGACTA+TGG + chr1.3:2323258-2323277 MS.gene27001:intron 20.0%
!!! CTAGAAAAAACATTTTACTT+TGG + chr1.3:2323819-2323838 MS.gene27001:CDS 20.0%
!!! TTCATTTTACTTTTAACACA+GGG + chr1.3:2322934-2322953 MS.gene27001:intron 20.0%
! ACAATTGTCAGTGAAAAAAA+TGG + chr1.3:2322991-2323010 MS.gene27001:CDS 25.0%
! AGGTATTATCAAACATTCTT+GGG - chr1.3:2323908-2323927 None:intergenic 25.0%
! CTATTACAAACTCTTACTTA+CGG + chr1.3:2323926-2323945 MS.gene27001:CDS 25.0%
! TAGGTATTATCAAACATTCT+TGG - chr1.3:2323909-2323928 None:intergenic 25.0%
! TATGCAAAGTAGATAAAAGT+TGG - chr1.3:2323185-2323204 None:intergenic 25.0%
! TATTACAAACTCTTACTTAC+GGG + chr1.3:2323927-2323946 MS.gene27001:CDS 25.0%
! TGATGAAATCAAATCTAAGT+TGG + chr1.3:2323053-2323072 MS.gene27001:CDS 25.0%
! TGCATATGTTATATACTTAG+GGG + chr1.3:2323199-2323218 MS.gene27001:intron 25.0%
!! CAAATTAAGAAAGTGTATTC+AGG - chr1.3:2322736-2322755 None:intergenic 25.0%
!! TGCATTTGTTAAATTTGCTT+TGG + chr1.3:2322870-2322889 MS.gene27001:intron 25.0%
!! TTAAGTCTTTTCATTTGTAC+TGG + chr1.3:2322622-2322641 MS.gene27001:intron 25.0%
!!! AATATTCTTTTGAAACAGAG+TGG + chr1.3:2323398-2323417 MS.gene27001:intron 25.0%
!!! ATTTTTTTCACTGACAATTG+TGG - chr1.3:2322992-2323011 None:intergenic 25.0%
!!! CTTCATTTTACTTTTAACAC+AGG + chr1.3:2322933-2322952 MS.gene27001:intron 25.0%
!!! TTTTTTCTCTCAAAAGTTGT+TGG - chr1.3:2322759-2322778 None:intergenic 25.0%
ATTGTCAGTGAAAAAAATGG+TGG + chr1.3:2322994-2323013 MS.gene27001:CDS 30.0%
CAAAGACTATACAACCAAAA+TGG + chr1.3:2323774-2323793 MS.gene27001:CDS 30.0%
CATGAAAACTGATAGAATTG+AGG - chr1.3:2322428-2322447 None:intergenic 30.0%
CGTAAGTAAGAGTTTGTAAT+AGG - chr1.3:2323928-2323947 None:intergenic 30.0%
GGTATTATCAAACATTCTTG+GGG - chr1.3:2323907-2323926 None:intergenic 30.0%
!!! GTTTTTTCTAGATTCGAATC+TGG - chr1.3:2323810-2323829 None:intergenic 30.0%
!!! GTTTTTTCTTACAAGAACAG+TGG - chr1.3:2323139-2323158 None:intergenic 30.0%
!!! TTAACATTTTTCAAGCGTCA+AGG + chr1.3:2323527-2323546 MS.gene27001:CDS 30.0%
AAACTCTTACTTACGGGAAA+AGG + chr1.3:2323933-2323952 MS.gene27001:CDS 35.0%
AATCACTTCAAAACCTCGAA+CGG - chr1.3:2323034-2323053 None:intergenic 35.0%
AATGTAGGTGCACATACAAT+TGG + chr1.3:2323726-2323745 MS.gene27001:intron 35.0%
ACTCAAAAACAGCAAGTCTA+AGG + chr1.3:2323456-2323475 MS.gene27001:CDS 35.0%
AGAAAGAAACACACACATCT+AGG - chr1.3:2323321-2323340 None:intergenic 35.0%
CATTCTGATATCCTTAGCAA+TGG - chr1.3:2322492-2322511 None:intergenic 35.0%
CATTGCTAAGGATATCAGAA+TGG + chr1.3:2322490-2322509 MS.gene27001:CDS 35.0%
CTCAAAAACAGCAAGTCTAA+GGG + chr1.3:2323457-2323476 MS.gene27001:CDS 35.0%
GACGCTTGAAAAATGTTAAG+AGG - chr1.3:2323526-2323545 None:intergenic 35.0%
TCAAAAACAGCAAGTCTAAG+GGG + chr1.3:2323458-2323477 MS.gene27001:CDS 35.0%
TGCAACAAGAAGAATGACTT+TGG - chr1.3:2322297-2322316 None:intergenic 35.0%
TTTCTAGATTCGAATCTGGT+TGG - chr1.3:2323806-2323825 None:intergenic 35.0%
! ATGACAATGTCATTAGCTTG+AGG - chr1.3:2322452-2322471 None:intergenic 35.0%
! ATTATTTCTCCCTTGGACTT+TGG + chr1.3:2323879-2323898 MS.gene27001:CDS 35.0%
! TCTTTTGCATGCATATGTCA+AGG + chr1.3:2322895-2322914 MS.gene27001:intron 35.0%
! TGACAACATTATTTCTCCCT+TGG + chr1.3:2323872-2323891 MS.gene27001:CDS 35.0%
! TGACAATGTCATTAGCTTGA+GGG - chr1.3:2322451-2322470 None:intergenic 35.0%
!!! ATTCTTTTGAAACAGAGTGG+AGG + chr1.3:2323401-2323420 MS.gene27001:intron 35.0%
AAAACCTTTATGTCGCGACT+CGG - chr1.3:2322603-2322622 None:intergenic 40.0%
AAATCAATGTGCCCAAGATC+AGG + chr1.3:2323846-2323865 MS.gene27001:CDS 40.0%
ATTTGAAAGTTCCACCTGAG+AGG - chr1.3:2323577-2323596 None:intergenic 40.0%
CAACAAGGTCTACTTCATCA+AGG - chr1.3:2323553-2323572 None:intergenic 40.0%
CCAAAGTGAAAATCATGGAC+AGG - chr1.3:2322353-2322372 None:intergenic 40.0%
CCTAACAAAAATTCCGTTCG+AGG + chr1.3:2323018-2323037 MS.gene27001:CDS 40.0%
GCCTTGTCTATGATCAAGTT+GGG + chr1.3:2324059-2324078 MS.gene27001:CDS 40.0%
TCCAAAAGACATTCCTCTAG+TGG - chr1.3:2322399-2322418 None:intergenic 40.0%
TGACATTGTCATGTCAGTCT+TGG + chr1.3:2322460-2322479 MS.gene27001:CDS 40.0%
TGCCTTGTCTATGATCAAGT+TGG + chr1.3:2324058-2324077 MS.gene27001:CDS 40.0%
TGTTAAAGAGACTCGTGACT+TGG + chr1.3:2323992-2324011 MS.gene27001:CDS 40.0%
TTTGAAAGTTCCACCTGAGA+GGG - chr1.3:2323576-2323595 None:intergenic 40.0%
TTTGAGTCTCTCCTTCCTAA+TGG - chr1.3:2323443-2323462 None:intergenic 40.0%
! ACCACTAGAGGAATGTCTTT+TGG + chr1.3:2322395-2322414 MS.gene27001:CDS 40.0%
! AGAGCGTCACTTCATAATGT+AGG + chr1.3:2323711-2323730 MS.gene27001:intron 40.0%
! CATGATTTTCACTTTGGCTG+GGG + chr1.3:2322356-2322375 MS.gene27001:CDS 40.0%
! CCATGATTTTCACTTTGGCT+GGG + chr1.3:2322355-2322374 MS.gene27001:CDS 40.0%
! CCTCGAACGGAATTTTTGTT+AGG - chr1.3:2323021-2323040 None:intergenic 40.0%
! CCTGTCCATGATTTTCACTT+TGG + chr1.3:2322350-2322369 MS.gene27001:CDS 40.0%
! CCTTGTCTATGATCAAGTTG+GGG + chr1.3:2324060-2324079 MS.gene27001:CDS 40.0%
! CTGCGATGCATCAATTTTGT+TGG + chr1.3:2322957-2322976 MS.gene27001:CDS 40.0%
! TCCATGATTTTCACTTTGGC+TGG + chr1.3:2322354-2322373 MS.gene27001:CDS 40.0%
!! CTGGTTGGTTGTTTCCATTT+TGG - chr1.3:2323791-2323810 None:intergenic 40.0%
AATCATGGACAGGATGAGCA+TGG - chr1.3:2322343-2322362 None:intergenic 45.0%
AGGTGCACATACAATTGGTG+TGG + chr1.3:2323731-2323750 MS.gene27001:intron 45.0%
ATCATGGACAGGATGAGCAT+GGG - chr1.3:2322342-2322361 None:intergenic 45.0%
ATGTTGTCACCACCTGATCT+TGG - chr1.3:2323861-2323880 None:intergenic 45.0%
CCCAGCCAAAGTGAAAATCA+TGG - chr1.3:2322358-2322377 None:intergenic 45.0%
CCCCAACTTGATCATAGACA+AGG - chr1.3:2324063-2324082 None:intergenic 45.0%
CTTCAACAGTGGCATTTGGT+GGG - chr1.3:2323502-2323521 None:intergenic 45.0%
TAAAACCAGTGAGAGGACGA+AGG - chr1.3:2324088-2324107 None:intergenic 45.0%
TCGCCATTAAAACCAGTGAG+AGG - chr1.3:2324095-2324114 None:intergenic 45.0%
TGTCATGTCAGTCTTGGAGA+AGG + chr1.3:2322466-2322485 MS.gene27001:CDS 45.0%
TGTTAAGAGGCCTTCAACAG+TGG - chr1.3:2323513-2323532 None:intergenic 45.0%
TGTTGTCACCACCTGATCTT+GGG - chr1.3:2323860-2323879 None:intergenic 45.0%
TTACCTGCACAAAACAGTCG+TGG - chr1.3:2322541-2322560 None:intergenic 45.0%
! ATATTGTTGCGCTTGCTGCT+AGG + chr1.3:2323109-2323128 MS.gene27001:CDS 45.0%
! CAGATGAAGTGCTTCTCACA+GGG + chr1.3:2323967-2323986 MS.gene27001:CDS 45.0%
! TATTGTTGCGCTTGCTGCTA+GGG + chr1.3:2323110-2323129 MS.gene27001:CDS 45.0%
! TCAGATGAAGTGCTTCTCAC+AGG + chr1.3:2323966-2323985 MS.gene27001:CDS 45.0%
! TTCAACAGTGGCATTTGGTG+GGG - chr1.3:2323501-2323520 None:intergenic 45.0%
!!! CGTCCTCTCACTGGTTTTAA+TGG + chr1.3:2324089-2324108 MS.gene27001:CDS 45.0%
AACAGAGTGGAGGACCTAAC+TGG + chr1.3:2323411-2323430 MS.gene27001:intron 50.0%
ACAGAGTGGAGGACCTAACT+GGG + chr1.3:2323412-2323431 MS.gene27001:intron 50.0%
ACTGGGAGCTACCATTAGGA+AGG + chr1.3:2323429-2323448 MS.gene27001:CDS 50.0%
AGGCCTTCAACAGTGGCATT+TGG - chr1.3:2323506-2323525 None:intergenic 50.0%
CCACCAAATGCCACTGTTGA+AGG + chr1.3:2323500-2323519 MS.gene27001:CDS 50.0%
CCTAACTGGGAGCTACCATT+AGG + chr1.3:2323425-2323444 MS.gene27001:CDS 50.0%
CCTAATGGTAGCTCCCAGTT+AGG - chr1.3:2323428-2323447 None:intergenic 50.0%
CCTTCAACAGTGGCATTTGG+TGG - chr1.3:2323503-2323522 None:intergenic 50.0%
CTTGGAGAAGGCCATTGCTA+AGG + chr1.3:2322478-2322497 MS.gene27001:CDS 50.0%
CTTGGGGAACCAAAGTCCAA+GGG - chr1.3:2323891-2323910 None:intergenic 50.0%
TCAATGTGCCCAAGATCAGG+TGG + chr1.3:2323849-2323868 MS.gene27001:CDS 50.0%
TCTGCACATGAGACTGTACG+AGG - chr1.3:2323090-2323109 None:intergenic 50.0%
TCTTGGGGAACCAAAGTCCA+AGG - chr1.3:2323892-2323911 None:intergenic 50.0%
! ATTGTTGCGCTTGCTGCTAG+GGG + chr1.3:2323111-2323130 MS.gene27001:CDS 50.0%
! CATCATGGTGGAACCACTAG+AGG + chr1.3:2322383-2322402 MS.gene27001:CDS 50.0%
! CTTCCACGACTGTTTTGTGC+AGG + chr1.3:2322535-2322554 MS.gene27001:CDS 50.0%
! GATTTTCACTTTGGCTGGGG+TGG + chr1.3:2322359-2322378 MS.gene27001:CDS 50.0%
! TCAACAGTGGCATTTGGTGG+GGG - chr1.3:2323500-2323519 None:intergenic 50.0%
AGCTCCGAGTCGCGACATAA+AGG + chr1.3:2322596-2322615 MS.gene27001:intron 55.0%
GTAGACCTTGTTGCCCTCTC+AGG + chr1.3:2323560-2323579 MS.gene27001:CDS 55.0%
TTCCACCTGAGAGGGCAACA+AGG - chr1.3:2323568-2323587 None:intergenic 55.0%
TTTGGCTGGGGTGGTCATCA+TGG + chr1.3:2322368-2322387 MS.gene27001:CDS 55.0%
GACCTTGTTGCCCTCTCAGG+TGG + chr1.3:2323563-2323582 MS.gene27001:intron 60.0%
GGGAACCTTCGTCCTCTCAC+TGG + chr1.3:2324080-2324099 MS.gene27001:CDS 60.0%
GGCTGGGGTGGTCATCATGG+TGG + chr1.3:2322371-2322390 MS.gene27001:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 2322284 2324145 2322284 ID=MS.gene27001
chr1.3 mRNA 2322284 2324145 2322284 ID=MS.gene27001.t1;Parent=MS.gene27001
chr1.3 exon 2322284 2322556 2322284 ID=MS.gene27001.t1.exon1;Parent=MS.gene27001.t1
chr1.3 CDS 2322284 2322556 2322284 ID=cds.MS.gene27001.t1;Parent=MS.gene27001.t1
chr1.3 exon 2322955 2323146 2322955 ID=MS.gene27001.t1.exon2;Parent=MS.gene27001.t1
chr1.3 CDS 2322955 2323146 2322955 ID=cds.MS.gene27001.t1;Parent=MS.gene27001.t1
chr1.3 exon 2323416 2323581 2323416 ID=MS.gene27001.t1.exon3;Parent=MS.gene27001.t1
chr1.3 CDS 2323416 2323581 2323416 ID=cds.MS.gene27001.t1;Parent=MS.gene27001.t1
chr1.3 exon 2323733 2324145 2323733 ID=MS.gene27001.t1.exon4;Parent=MS.gene27001.t1
chr1.3 CDS 2323733 2324145 2323733 ID=cds.MS.gene27001.t1;Parent=MS.gene27001.t1
Gene Sequence

>MS.gene27001

ATGTCTTTCACCAAAGTCATTCTTCTTGTTGCAGCTTTTCTCTCACTTACACTTTCCCATGCTCATCCTGTCCATGATTTTCACTTTGGCTGGGGTGGTCATCATGGTGGAACCACTAGAGGAATGTCTTTTGGACTTTCTCCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTCTTGGAGAAGGCCATTGCTAAGGATATCAGAATGGCAGCTTCTCTTCTTCGACTTCACTTCCACGACTGTTTTGTGCAGGTAAATTTCAAACACAATAGCAATACATGTTTTAAATACAGCTCCGAGTCGCGACATAAAGGTTTTTAAGTCTTTTCATTTGTACTGGACACATTTGATTGTACTTCGATATAATATCAAGAATTGCGACTGCAAGTAAAACATAAAATAATATCATAATCATGTATCTAAGTCTTCCTGAATACACTTTCTTAATTTGCCAACAACTTTTGAGAGAAAAAAAATAGATTCATTTCATAAGGAATTAATTCTTATTCGCAGTATATAAAATCATGTATCTTTTTGCTGAGCTATTTTGTTGTATATATTGCTTTGCATTTGTTAAATTTGCTTTGGATTCTTTTGCATGCATATGTCAAGGAGCTGAAAAATTTCTCTTCATTTTACTTTTAACACAGGGCTGCGATGCATCAATTTTGTTGGACGATAGCGCCACAATTGTCAGTGAAAAAAATGGTGGACCTAACAAAAATTCCGTTCGAGGTTTTGAAGTGATTGATGAAATCAAATCTAAGTTGGAACAAGCATGTCCTCGTACAGTCTCATGTGCAGATATTGTTGCGCTTGCTGCTAGGGGATCCACTGTTCTTGTAAGAAAAAACACACATGACTCAAATTGAGACGACCAACTTTTATCTACTTTGCATATGTTATATACTTAGGGGTCATGTTTTTTGAATAGTTGTTAATAATGAAAAACAACCAATTTTTTAATAGACTATGGTGAAAGAAAATAACATTTTAAGTACAATATGATTAAACCTAGATGTGTGTGTTTCTTTCTGTATATATAAGGTAATCTGACACACAAATACTAACATGCTTAATTTGAAACTTGATCAATATTCTTTTGAAACAGAGTGGAGGACCTAACTGGGAGCTACCATTAGGAAGGAGAGACTCAAAAACAGCAAGTCTAAGGGGCTCAAACAAAAACATTCCCCCACCAAATGCCACTGTTGAAGGCCTCTTAACATTTTTCAAGCGTCAAGGCCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGTGGAACTTTCAAATTCTTTTTGAACAAACAGAACTTTCAAATTCTTAATCACATTTTCTATTAGTGTTACATATTACATCTCTGTCTCGTAATAATTGTCACGTTTACACACAAAAATTGTTCTTAAAAGAGCGTCACTTCATAATGTAGGTGCACATACAATTGGTGTGGCAAAATGTGCAACATTCAAGCAAAGACTATACAACCAAAATGGAAACAACCAACCAGATTCGAATCTAGAAAAAACATTTTACTTTGGTTTGAAATCAATGTGCCCAAGATCAGGTGGTGACAACATTATTTCTCCCTTGGACTTTGGTTCCCCAAGAATGTTTGATAATACCTATTACAAACTCTTACTTACGGGAAAAGGATTGCTTAATTCAGATGAAGTGCTTCTCACAGGGAATGTTAAAGAGACTCGTGACTTGGTGAAGAAATATGCACAAGATGAGAGTCTCTTCTTTCAACAATTTGCCTTGTCTATGATCAAGTTGGGGAACCTTCGTCCTCTCACTGGTTTTAATGGCGAAGTTAGAAAGAATTGTCGTCGAGTTAATTAA
Protein sequence

>MS.gene27001.t1

MSFTKVILLVAAFLSLTLSHAHPVHDFHFGWGGHHGGTTRGMSFGLSPQFYQFSCPQANDIVMSVLEKAIAKDIRMAASLLRLHFHDCFVQGCDASILLDDSATIVSEKNGGPNKNSVRGFEVIDEIKSKLEQACPRTVSCADIVALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATVEGLLTFFKRQGLDEVDLVALSGAHTIGVAKCATFKQRLYNQNGNNQPDSNLEKTFYFGLKSMCPRSGGDNIISPLDFGSPRMFDNTYYKLLLTGKGLLNSDEVLLTGNVKETRDLVKKYAQDESLFFQQFALSMIKLGNLRPLTGFNGEVRKNCRRVN