Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67066.t1 | XP_003603389.1 | 95.3 | 320 | 10 | 2 | 1 | 316 | 2 | 320 | 4.00E-169 | 604 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67066.t1 | Q8GY91 | 66.1 | 280 | 85 | 3 | 37 | 316 | 60 | 329 | 9.6e-103 | 374.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67066.t1 | G7JB12 | 95.3 | 320 | 10 | 2 | 1 | 316 | 2 | 320 | 2.9e-169 | 604.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene67066 | 0.871263 | 7.81E-67 | -1.69E-46 |
| MS.gene049351 | MS.gene67066 | 0.871525 | 6.40E-67 | -1.69E-46 |
| MS.gene049356 | MS.gene67066 | 0.809909 | 1.50E-50 | -1.69E-46 |
| MS.gene049389 | MS.gene67066 | 0.844758 | 6.20E-59 | -1.69E-46 |
| MS.gene049427 | MS.gene67066 | 0.877922 | 4.26E-69 | -1.69E-46 |
| MS.gene049491 | MS.gene67066 | 0.857486 | 1.58E-62 | -1.69E-46 |
| MS.gene049599 | MS.gene67066 | -0.806836 | 6.78E-50 | -1.69E-46 |
| MS.gene049614 | MS.gene67066 | 0.850946 | 1.22E-60 | -1.69E-46 |
| MS.gene049661 | MS.gene67066 | 0.858327 | 8.89E-63 | -1.69E-46 |
| MS.gene049662 | MS.gene67066 | 0.862391 | 5.24E-64 | -1.69E-46 |
| MS.gene049758 | MS.gene67066 | 0.890053 | 1.39E-73 | -1.69E-46 |
| MS.gene049760 | MS.gene67066 | 0.825288 | 5.09E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene67066 | 0.812824 | 3.49E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene67066 | 0.876057 | 1.89E-68 | -1.69E-46 |
| MS.gene050099 | MS.gene67066 | 0.840613 | 7.82E-58 | -1.69E-46 |
| MS.gene050128 | MS.gene67066 | 0.844283 | 8.32E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene67066 | 0.910921 | 1.09E-82 | -1.69E-46 |
| MS.gene050397 | MS.gene67066 | 0.869204 | 3.69E-66 | -1.69E-46 |
| MS.gene050404 | MS.gene67066 | 0.823424 | 1.40E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene67066 | 0.813565 | 2.40E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene67066 | 0.882272 | 1.20E-70 | -1.69E-46 |
| MS.gene050464 | MS.gene67066 | 0.850396 | 1.74E-60 | -1.69E-46 |
| MS.gene050529 | MS.gene67066 | 0.897815 | 9.75E-77 | -1.69E-46 |
| MS.gene05053 | MS.gene67066 | 0.806827 | 6.81E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene67066 | 0.839942 | 1.17E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene67066 | 0.870865 | 1.06E-66 | -1.69E-46 |
| MS.gene050770 | MS.gene67066 | 0.874897 | 4.72E-68 | -1.69E-46 |
| MS.gene050783 | MS.gene67066 | 0.813816 | 2.11E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene67066 | 0.852715 | 3.85E-61 | -1.69E-46 |
| MS.gene05101 | MS.gene67066 | 0.911364 | 6.61E-83 | -1.69E-46 |
| MS.gene05105 | MS.gene67066 | 0.824373 | 8.36E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene67066 | 0.815428 | 9.29E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene67066 | 0.811408 | 7.11E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene67066 | 0.91105 | 9.42E-83 | -1.69E-46 |
| MS.gene051582 | MS.gene67066 | 0.830551 | 2.75E-55 | -1.69E-46 |
| MS.gene051662 | MS.gene67066 | 0.824016 | 1.01E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene67066 | 0.832031 | 1.19E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene67066 | 0.842222 | 2.95E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene67066 | 0.81709 | 3.95E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene67066 | 0.823876 | 1.09E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene67066 | 0.90745 | 5.00E-81 | -1.69E-46 |
| MS.gene052178 | MS.gene67066 | 0.87172 | 5.51E-67 | -1.69E-46 |
| MS.gene052188 | MS.gene67066 | 0.881622 | 2.06E-70 | -1.69E-46 |
| MS.gene052207 | MS.gene67066 | 0.80225 | 6.13E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene67066 | 0.839892 | 1.21E-57 | -1.69E-46 |
| MS.gene052287 | MS.gene67066 | 0.801188 | 1.01E-48 | -1.69E-46 |
| MS.gene052290 | MS.gene67066 | 0.867228 | 1.60E-65 | -1.69E-46 |
| MS.gene052310 | MS.gene67066 | 0.898934 | 3.26E-77 | -1.69E-46 |
| MS.gene052322 | MS.gene67066 | 0.835928 | 1.26E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene67066 | 0.900665 | 5.83E-78 | -1.69E-46 |
| MS.gene052340 | MS.gene67066 | 0.872639 | 2.72E-67 | -1.69E-46 |
| MS.gene052379 | MS.gene67066 | 0.834791 | 2.44E-56 | -1.69E-46 |
| MS.gene052421 | MS.gene67066 | 0.811072 | 8.40E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene67066 | 0.804992 | 1.66E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene67066 | 0.815253 | 1.02E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene67066 | 0.8319 | 1.28E-55 | -1.69E-46 |
| MS.gene053009 | MS.gene67066 | 0.812482 | 4.15E-51 | -1.69E-46 |
| MS.gene053103 | MS.gene67066 | 0.851346 | 9.42E-61 | -1.69E-46 |
| MS.gene053104 | MS.gene67066 | 0.84144 | 4.75E-58 | -1.69E-46 |
| MS.gene053107 | MS.gene67066 | 0.835442 | 1.67E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene67066 | 0.867597 | 1.22E-65 | -1.69E-46 |
| MS.gene053322 | MS.gene67066 | 0.871024 | 9.36E-67 | -1.69E-46 |
| MS.gene053557 | MS.gene67066 | 0.876894 | 9.71E-69 | -1.69E-46 |
| MS.gene053836 | MS.gene67066 | 0.871386 | 7.11E-67 | -1.69E-46 |
| MS.gene053907 | MS.gene67066 | 0.824649 | 7.20E-54 | -1.69E-46 |
| MS.gene053971 | MS.gene67066 | 0.82243 | 2.38E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene67066 | 0.875426 | 3.11E-68 | -1.69E-46 |
| MS.gene054376 | MS.gene67066 | 0.880362 | 5.85E-70 | -1.69E-46 |
| MS.gene05455 | MS.gene67066 | 0.869647 | 2.65E-66 | -1.69E-46 |
| MS.gene054802 | MS.gene67066 | 0.856965 | 2.25E-62 | -1.69E-46 |
| MS.gene054803 | MS.gene67066 | 0.854941 | 8.80E-62 | -1.69E-46 |
| MS.gene054804 | MS.gene67066 | 0.857637 | 1.43E-62 | -1.69E-46 |
| MS.gene054955 | MS.gene67066 | 0.824289 | 8.75E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene67066 | 0.807181 | 5.73E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene67066 | 0.850113 | 2.10E-60 | -1.69E-46 |
| MS.gene055254 | MS.gene67066 | 0.843366 | 1.46E-58 | -1.69E-46 |
| MS.gene055277 | MS.gene67066 | 0.919407 | 4.68E-87 | -1.69E-46 |
| MS.gene055390 | MS.gene67066 | 0.893852 | 4.27E-75 | -1.69E-46 |
| MS.gene055397 | MS.gene67066 | 0.857773 | 1.30E-62 | -1.69E-46 |
| MS.gene055412 | MS.gene67066 | 0.855259 | 7.11E-62 | -1.69E-46 |
| MS.gene055422 | MS.gene67066 | 0.908794 | 1.16E-81 | -1.69E-46 |
| MS.gene055428 | MS.gene67066 | 0.894056 | 3.53E-75 | -1.69E-46 |
| MS.gene055499 | MS.gene67066 | 0.844123 | 9.18E-59 | -1.69E-46 |
| MS.gene055533 | MS.gene67066 | 0.813686 | 2.26E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene67066 | 0.801176 | 1.02E-48 | -1.69E-46 |
| MS.gene055604 | MS.gene67066 | 0.812813 | 3.51E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene67066 | 0.810148 | 1.33E-50 | -1.69E-46 |
| MS.gene055896 | MS.gene67066 | 0.872592 | 2.83E-67 | -1.69E-46 |
| MS.gene05592 | MS.gene67066 | 0.824887 | 6.33E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene67066 | 0.82539 | 4.81E-54 | -1.69E-46 |
| MS.gene056314 | MS.gene67066 | 0.813383 | 2.63E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene67066 | 0.862154 | 6.20E-64 | -1.69E-46 |
| MS.gene056410 | MS.gene67066 | 0.861809 | 7.90E-64 | -1.69E-46 |
| MS.gene056609 | MS.gene67066 | 0.88752 | 1.33E-72 | -1.69E-46 |
| MS.gene056612 | MS.gene67066 | 0.905601 | 3.61E-80 | -1.69E-46 |
| MS.gene056659 | MS.gene67066 | 0.817594 | 3.04E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene67066 | 0.851981 | 6.23E-61 | -1.69E-46 |
| MS.gene056897 | MS.gene67066 | 0.843256 | 1.57E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene67066 | 0.871027 | 9.34E-67 | -1.69E-46 |
| MS.gene05702 | MS.gene67066 | 0.857481 | 1.59E-62 | -1.69E-46 |
| MS.gene057121 | MS.gene67066 | 0.855338 | 6.75E-62 | -1.69E-46 |
| MS.gene057123 | MS.gene67066 | 0.844871 | 5.78E-59 | -1.69E-46 |
| MS.gene057124 | MS.gene67066 | 0.826901 | 2.10E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene67066 | 0.858079 | 1.05E-62 | -1.69E-46 |
| MS.gene057146 | MS.gene67066 | 0.845725 | 3.40E-59 | -1.69E-46 |
| MS.gene057245 | MS.gene67066 | 0.817417 | 3.33E-52 | -1.69E-46 |
| MS.gene057295 | MS.gene67066 | 0.859232 | 4.77E-63 | -1.69E-46 |
| MS.gene05733 | MS.gene67066 | 0.839834 | 1.25E-57 | -1.69E-46 |
| MS.gene05735 | MS.gene67066 | 0.814859 | 1.24E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene67066 | 0.818103 | 2.33E-52 | -1.69E-46 |
| MS.gene057448 | MS.gene67066 | 0.825857 | 3.73E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene67066 | 0.831197 | 1.91E-55 | -1.69E-46 |
| MS.gene057450 | MS.gene67066 | 0.836826 | 7.45E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene67066 | 0.878141 | 3.57E-69 | -1.69E-46 |
| MS.gene058019 | MS.gene67066 | 0.800483 | 1.41E-48 | -1.69E-46 |
| MS.gene058082 | MS.gene67066 | 0.868984 | 4.35E-66 | -1.69E-46 |
| MS.gene05811 | MS.gene67066 | 0.887993 | 8.75E-73 | -1.69E-46 |
| MS.gene058142 | MS.gene67066 | 0.824205 | 9.16E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene67066 | 0.872483 | 3.07E-67 | -1.69E-46 |
| MS.gene058276 | MS.gene67066 | 0.841355 | 5.00E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene67066 | 0.895888 | 6.24E-76 | -1.69E-46 |
| MS.gene058323 | MS.gene67066 | 0.808283 | 3.34E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene67066 | 0.866409 | 2.91E-65 | -1.69E-46 |
| MS.gene05842 | MS.gene67066 | 0.802615 | 5.16E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene67066 | 0.932206 | 1.21E-94 | -1.69E-46 |
| MS.gene058787 | MS.gene67066 | 0.847956 | 8.33E-60 | -1.69E-46 |
| MS.gene058845 | MS.gene67066 | 0.846797 | 1.73E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene67066 | 0.848817 | 4.81E-60 | -1.69E-46 |
| MS.gene058993 | MS.gene67066 | 0.803753 | 3.00E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene67066 | 0.870945 | 9.94E-67 | -1.69E-46 |
| MS.gene059294 | MS.gene67066 | 0.816621 | 5.03E-52 | -1.69E-46 |
| MS.gene059326 | MS.gene67066 | 0.853321 | 2.58E-61 | -1.69E-46 |
| MS.gene059342 | MS.gene67066 | 0.845888 | 3.07E-59 | -1.69E-46 |
| MS.gene059518 | MS.gene67066 | 0.871682 | 5.67E-67 | -1.69E-46 |
| MS.gene059536 | MS.gene67066 | 0.877256 | 7.27E-69 | -1.69E-46 |
| MS.gene059597 | MS.gene67066 | 0.889654 | 2.00E-73 | -1.69E-46 |
| MS.gene05959 | MS.gene67066 | 0.882372 | 1.10E-70 | -1.69E-46 |
| MS.gene059676 | MS.gene67066 | 0.886 | 5.00E-72 | -1.69E-46 |
| MS.gene059688 | MS.gene67066 | 0.882378 | 1.10E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene67066 | 0.890123 | 1.31E-73 | -1.69E-46 |
| MS.gene059695 | MS.gene67066 | 0.887919 | 9.34E-73 | -1.69E-46 |
| MS.gene059708 | MS.gene67066 | 0.875207 | 3.70E-68 | -1.69E-46 |
| MS.gene05984 | MS.gene67066 | 0.864753 | 9.69E-65 | -1.69E-46 |
| MS.gene059894 | MS.gene67066 | 0.902315 | 1.10E-78 | -1.69E-46 |
| MS.gene059899 | MS.gene67066 | 0.82106 | 4.93E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene67066 | 0.895667 | 7.71E-76 | -1.69E-46 |
| MS.gene059974 | MS.gene67066 | 0.815905 | 7.27E-52 | -1.69E-46 |
| MS.gene060005 | MS.gene67066 | 0.813997 | 1.93E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene67066 | 0.84461 | 6.80E-59 | -1.69E-46 |
| MS.gene060403 | MS.gene67066 | 0.816893 | 4.37E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene67066 | 0.839003 | 2.05E-57 | -1.69E-46 |
| MS.gene060476 | MS.gene67066 | 0.802306 | 5.97E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene67066 | 0.864339 | 1.31E-64 | -1.69E-46 |
| MS.gene060818 | MS.gene67066 | 0.853604 | 2.14E-61 | -1.69E-46 |
| MS.gene06090 | MS.gene67066 | 0.853337 | 2.55E-61 | -1.69E-46 |
| MS.gene061041 | MS.gene67066 | 0.837098 | 6.35E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene67066 | 0.887345 | 1.55E-72 | -1.69E-46 |
| MS.gene061051 | MS.gene67066 | -0.87709 | 8.31E-69 | -1.69E-46 |
| MS.gene061154 | MS.gene67066 | 0.80101 | 1.10E-48 | -1.69E-46 |
| MS.gene061200 | MS.gene67066 | 0.865518 | 5.57E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene67066 | MS.gene48746 | PPI |
| MS.gene67066 | MS.gene88044 | PPI |
| MS.gene67066 | MS.gene45786 | PPI |
| MS.gene67066 | MS.gene09575 | PPI |
| MS.gene67066 | MS.gene35853 | PPI |
| MS.gene67066 | MS.gene015231 | PPI |
| MS.gene67066 | MS.gene067613 | PPI |
| MS.gene67066 | MS.gene029047 | PPI |
| MS.gene67066 | MS.gene32715 | PPI |
| MS.gene67066 | MS.gene57204 | PPI |
| MS.gene67066 | MS.gene20276 | PPI |
| MS.gene67066 | MS.gene043043 | PPI |
| MS.gene67066 | MS.gene35795 | PPI |
| MS.gene67066 | MS.gene44482 | PPI |
| MS.gene48733 | MS.gene67066 | PPI |
| MS.gene67066 | MS.gene80170 | PPI |
| MS.gene67066 | MS.gene48740 | PPI |
| MS.gene67066 | MS.gene043054 | PPI |
| MS.gene67066 | MS.gene35931 | PPI |
| MS.gene67066 | MS.gene014924 | PPI |
| MS.gene67066 | MS.gene88144 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67066.t1 | MTR_3g107060 | 95.312 | 320 | 10 | 2 | 1 | 316 | 2 | 320 | 0.0 | 626 |
| MS.gene67066.t1 | MTR_5g022510 | 37.860 | 243 | 127 | 6 | 82 | 310 | 11 | 243 | 5.26e-42 | 147 |
| MS.gene67066.t1 | MTR_4g073410 | 37.603 | 242 | 127 | 7 | 83 | 310 | 13 | 244 | 5.28e-42 | 147 |
| MS.gene67066.t1 | MTR_4g061140 | 38.983 | 236 | 121 | 7 | 89 | 310 | 20 | 246 | 1.61e-39 | 139 |
| MS.gene67066.t1 | MTR_4g061140 | 38.983 | 236 | 121 | 7 | 89 | 310 | 20 | 246 | 1.62e-39 | 139 |
| MS.gene67066.t1 | MTR_5g022510 | 38.140 | 215 | 110 | 5 | 109 | 310 | 14 | 218 | 1.14e-37 | 135 |
| MS.gene67066.t1 | MTR_4g061140 | 39.070 | 215 | 109 | 6 | 109 | 310 | 7 | 212 | 5.44e-36 | 129 |
| MS.gene67066.t1 | MTR_3g088160 | 35.223 | 247 | 114 | 8 | 104 | 313 | 121 | 358 | 4.38e-32 | 123 |
| MS.gene67066.t1 | MTR_3g088160 | 35.223 | 247 | 114 | 8 | 104 | 313 | 121 | 358 | 7.59e-32 | 123 |
| MS.gene67066.t1 | MTR_3g094650 | 28.102 | 274 | 128 | 10 | 87 | 306 | 43 | 301 | 6.16e-23 | 97.1 |
| MS.gene67066.t1 | MTR_4g095450 | 27.707 | 314 | 163 | 10 | 52 | 312 | 7 | 309 | 2.19e-21 | 92.8 |
| MS.gene67066.t1 | MTR_4g029190 | 28.731 | 268 | 119 | 7 | 87 | 308 | 80 | 321 | 4.73e-21 | 92.4 |
| MS.gene67066.t1 | MTR_6g043240 | 27.445 | 317 | 149 | 11 | 54 | 306 | 11 | 310 | 2.21e-20 | 90.5 |
| MS.gene67066.t1 | MTR_4g029200 | 29.963 | 267 | 142 | 9 | 83 | 308 | 57 | 319 | 4.46e-20 | 89.4 |
| MS.gene67066.t1 | MTR_0155s0040 | 29.286 | 280 | 129 | 10 | 87 | 315 | 42 | 303 | 4.54e-20 | 89.0 |
| MS.gene67066.t1 | MTR_1g077000 | 30.078 | 256 | 110 | 8 | 101 | 306 | 70 | 306 | 1.97e-19 | 87.4 |
| MS.gene67066.t1 | MTR_7g072510 | 28.676 | 272 | 129 | 9 | 88 | 308 | 36 | 293 | 2.15e-19 | 87.0 |
| MS.gene67066.t1 | MTR_7g029030 | 27.068 | 266 | 148 | 6 | 88 | 312 | 45 | 305 | 4.44e-19 | 86.3 |
| MS.gene67066.t1 | MTR_8g062780 | 29.329 | 283 | 120 | 10 | 87 | 306 | 38 | 303 | 5.07e-19 | 86.3 |
| MS.gene67066.t1 | MTR_7g072480 | 29.197 | 274 | 129 | 9 | 88 | 310 | 40 | 299 | 5.58e-19 | 86.3 |
| MS.gene67066.t1 | MTR_4g122640 | 29.304 | 273 | 120 | 10 | 101 | 316 | 69 | 325 | 8.83e-19 | 85.9 |
| MS.gene67066.t1 | MTR_5g022870 | 28.302 | 265 | 120 | 10 | 102 | 310 | 55 | 305 | 1.25e-18 | 85.1 |
| MS.gene67066.t1 | MTR_1g025980 | 30.116 | 259 | 113 | 9 | 102 | 306 | 56 | 300 | 6.11e-18 | 83.2 |
| MS.gene67066.t1 | MTR_4g083710 | 26.909 | 275 | 131 | 8 | 88 | 306 | 43 | 303 | 9.91e-18 | 82.8 |
| MS.gene67066.t1 | MTR_3g466200 | 28.295 | 258 | 117 | 10 | 102 | 306 | 57 | 299 | 1.26e-17 | 82.4 |
| MS.gene67066.t1 | MTR_3g092990 | 28.929 | 280 | 145 | 10 | 81 | 311 | 36 | 310 | 1.61e-17 | 82.0 |
| MS.gene67066.t1 | MTR_5g008440 | 33.721 | 172 | 96 | 5 | 142 | 310 | 25 | 181 | 1.88e-17 | 79.7 |
| MS.gene67066.t1 | MTR_3g072190 | 27.881 | 269 | 123 | 7 | 88 | 306 | 50 | 297 | 2.51e-17 | 81.3 |
| MS.gene67066.t1 | MTR_5g021060 | 27.599 | 279 | 133 | 9 | 87 | 308 | 45 | 311 | 3.06e-17 | 81.3 |
| MS.gene67066.t1 | MTR_2g084110 | 27.574 | 272 | 130 | 11 | 87 | 306 | 40 | 296 | 3.49e-17 | 80.9 |
| MS.gene67066.t1 | MTR_2g084000 | 27.839 | 273 | 129 | 11 | 87 | 306 | 41 | 298 | 3.85e-17 | 80.9 |
| MS.gene67066.t1 | MTR_4g074980 | 28.870 | 239 | 144 | 8 | 88 | 306 | 41 | 273 | 5.12e-17 | 80.1 |
| MS.gene67066.t1 | MTR_4g074980 | 33.750 | 160 | 88 | 5 | 88 | 234 | 41 | 195 | 6.74e-17 | 79.3 |
| MS.gene67066.t1 | MTR_8g075100 | 27.547 | 265 | 122 | 9 | 102 | 310 | 58 | 308 | 1.66e-16 | 79.0 |
| MS.gene67066.t1 | MTR_5g083860 | 26.619 | 278 | 135 | 9 | 83 | 306 | 42 | 304 | 1.74e-16 | 79.0 |
| MS.gene67066.t1 | MTR_4g074990 | 29.204 | 226 | 95 | 8 | 88 | 255 | 40 | 258 | 2.36e-16 | 78.6 |
| MS.gene67066.t1 | MTR_5g016010 | 31.844 | 179 | 94 | 7 | 88 | 250 | 47 | 213 | 2.96e-16 | 78.6 |
| MS.gene67066.t1 | MTR_2g029860 | 25.969 | 258 | 135 | 8 | 104 | 311 | 63 | 314 | 4.10e-16 | 78.2 |
| MS.gene67066.t1 | MTR_0286s0010 | 26.182 | 275 | 138 | 8 | 87 | 306 | 49 | 313 | 5.54e-16 | 77.8 |
| MS.gene67066.t1 | MTR_6g008075 | 26.182 | 275 | 138 | 8 | 87 | 306 | 49 | 313 | 5.54e-16 | 77.8 |
| MS.gene67066.t1 | MTR_8g076820 | 27.715 | 267 | 118 | 9 | 101 | 308 | 61 | 311 | 6.86e-16 | 77.4 |
| MS.gene67066.t1 | MTR_2g084010 | 25.547 | 274 | 134 | 9 | 87 | 306 | 40 | 297 | 8.80e-16 | 77.0 |
| MS.gene67066.t1 | MTR_2g084020 | 25.182 | 274 | 135 | 9 | 87 | 306 | 40 | 297 | 3.28e-15 | 75.5 |
| MS.gene67066.t1 | MTR_3g072190 | 27.679 | 224 | 108 | 4 | 127 | 306 | 17 | 230 | 3.28e-15 | 74.3 |
| MS.gene67066.t1 | MTR_3g467600 | 28.571 | 266 | 112 | 10 | 102 | 308 | 59 | 305 | 4.92e-15 | 75.1 |
| MS.gene67066.t1 | MTR_7g026990 | 27.165 | 254 | 121 | 8 | 102 | 306 | 63 | 301 | 9.87e-15 | 73.9 |
| MS.gene67066.t1 | MTR_5g074860 | 26.562 | 320 | 164 | 14 | 44 | 308 | 3 | 306 | 1.00e-14 | 73.9 |
| MS.gene67066.t1 | MTR_1g022970 | 27.715 | 267 | 119 | 8 | 101 | 308 | 77 | 328 | 1.65e-14 | 73.6 |
| MS.gene67066.t1 | MTR_2g029750 | 26.667 | 255 | 141 | 8 | 102 | 311 | 61 | 314 | 1.68e-14 | 73.6 |
| MS.gene67066.t1 | MTR_1g115900 | 35.211 | 142 | 79 | 4 | 102 | 234 | 59 | 196 | 7.27e-14 | 71.6 |
| MS.gene67066.t1 | MTR_4g030890 | 32.143 | 168 | 90 | 6 | 83 | 234 | 111 | 270 | 1.30e-13 | 71.2 |
| MS.gene67066.t1 | MTR_3g094670 | 28.016 | 257 | 118 | 9 | 102 | 306 | 60 | 301 | 1.31e-13 | 70.9 |
| MS.gene67066.t1 | MTR_5g014100 | 26.740 | 273 | 124 | 8 | 101 | 311 | 57 | 315 | 2.10e-13 | 70.1 |
| MS.gene67066.t1 | MTR_4g125940 | 26.990 | 289 | 123 | 12 | 87 | 308 | 43 | 310 | 3.71e-13 | 69.3 |
| MS.gene67066.t1 | MTR_3g092990 | 28.000 | 275 | 143 | 11 | 81 | 311 | 36 | 299 | 6.10e-13 | 68.6 |
| MS.gene67066.t1 | MTR_4g127670 | 27.306 | 271 | 121 | 9 | 101 | 312 | 55 | 308 | 7.44e-13 | 68.6 |
| MS.gene67066.t1 | MTR_7g093370 | 26.667 | 255 | 136 | 8 | 102 | 308 | 101 | 352 | 7.54e-13 | 68.9 |
| MS.gene67066.t1 | MTR_2g029820 | 26.103 | 272 | 153 | 8 | 87 | 311 | 44 | 314 | 8.54e-13 | 68.6 |
| MS.gene67066.t1 | MTR_4g125940 | 27.106 | 273 | 113 | 10 | 101 | 308 | 4 | 255 | 9.52e-13 | 67.8 |
| MS.gene67066.t1 | MTR_3g466180 | 29.297 | 256 | 118 | 8 | 102 | 308 | 63 | 304 | 1.34e-12 | 67.8 |
| MS.gene67066.t1 | MTR_7g086820 | 25.448 | 279 | 137 | 11 | 87 | 311 | 35 | 296 | 1.94e-12 | 67.4 |
| MS.gene67066.t1 | MTR_4g031140 | 31.902 | 163 | 87 | 6 | 88 | 234 | 44 | 198 | 2.04e-12 | 67.4 |
| MS.gene67066.t1 | MTR_4g114210 | 34.507 | 142 | 78 | 4 | 101 | 234 | 52 | 186 | 5.17e-12 | 65.9 |
| MS.gene67066.t1 | MTR_5g074860 | 26.644 | 289 | 164 | 13 | 44 | 308 | 3 | 267 | 1.13e-11 | 64.7 |
| MS.gene67066.t1 | MTR_2g040000 | 26.766 | 269 | 140 | 11 | 88 | 308 | 53 | 312 | 1.63e-11 | 64.7 |
| MS.gene67066.t1 | MTR_3g094630 | 26.909 | 275 | 132 | 9 | 88 | 308 | 44 | 303 | 1.79e-11 | 64.3 |
| MS.gene67066.t1 | MTR_3g105790 | 24.609 | 256 | 139 | 8 | 104 | 312 | 59 | 307 | 3.47e-11 | 63.5 |
| MS.gene67066.t1 | MTR_2g008160 | 29.960 | 247 | 130 | 10 | 95 | 316 | 49 | 277 | 6.48e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67066.t1 | AT4G32320 | 66.071 | 280 | 85 | 3 | 37 | 316 | 60 | 329 | 8.06e-136 | 388 |
| MS.gene67066.t1 | AT3G09640 | 36.759 | 253 | 125 | 7 | 83 | 310 | 4 | 246 | 2.37e-40 | 142 |
| MS.gene67066.t1 | AT3G09640 | 36.759 | 253 | 125 | 7 | 83 | 310 | 4 | 246 | 2.37e-40 | 142 |
| MS.gene67066.t1 | AT4G35000 | 37.652 | 247 | 130 | 7 | 83 | 315 | 12 | 248 | 2.15e-39 | 140 |
| MS.gene67066.t1 | AT4G35970 | 37.603 | 242 | 126 | 7 | 83 | 310 | 11 | 241 | 2.35e-39 | 140 |
| MS.gene67066.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.55e-39 | 139 |
| MS.gene67066.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene67066.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene67066.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene67066.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene67066.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene67066.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene67066.t1 | AT1G07890 | 37.288 | 236 | 125 | 7 | 89 | 310 | 20 | 246 | 3.97e-39 | 138 |
| MS.gene67066.t1 | AT4G35970 | 37.838 | 222 | 113 | 7 | 83 | 290 | 11 | 221 | 1.12e-34 | 126 |
| MS.gene67066.t1 | AT1G77490 | 34.328 | 268 | 128 | 9 | 86 | 314 | 86 | 344 | 3.40e-31 | 121 |
| MS.gene67066.t1 | AT1G77490 | 34.328 | 268 | 128 | 9 | 86 | 314 | 86 | 344 | 3.86e-31 | 121 |
| MS.gene67066.t1 | AT4G08390 | 33.065 | 248 | 120 | 8 | 104 | 314 | 127 | 365 | 4.76e-31 | 120 |
| MS.gene67066.t1 | AT4G08390 | 33.065 | 248 | 120 | 8 | 104 | 314 | 127 | 365 | 4.76e-31 | 120 |
| MS.gene67066.t1 | AT4G08390 | 33.065 | 248 | 120 | 8 | 104 | 314 | 127 | 365 | 4.76e-31 | 120 |
| MS.gene67066.t1 | AT4G08390 | 33.065 | 248 | 120 | 8 | 104 | 314 | 126 | 364 | 4.83e-31 | 120 |
| MS.gene67066.t1 | AT4G08390 | 33.480 | 227 | 121 | 8 | 104 | 314 | 127 | 339 | 1.75e-26 | 107 |
| MS.gene67066.t1 | AT1G14550 | 30.909 | 275 | 122 | 12 | 88 | 308 | 42 | 302 | 4.67e-22 | 94.7 |
| MS.gene67066.t1 | AT4G16270 | 31.939 | 263 | 108 | 9 | 101 | 306 | 81 | 329 | 1.30e-21 | 94.0 |
| MS.gene67066.t1 | AT1G14540 | 27.660 | 282 | 117 | 10 | 88 | 306 | 37 | 294 | 2.11e-20 | 90.1 |
| MS.gene67066.t1 | AT5G47000 | 29.811 | 265 | 124 | 8 | 101 | 314 | 64 | 317 | 1.57e-19 | 87.8 |
| MS.gene67066.t1 | AT5G40150 | 29.259 | 270 | 128 | 9 | 93 | 311 | 55 | 312 | 6.84e-19 | 85.9 |
| MS.gene67066.t1 | AT4G31760 | 29.183 | 257 | 126 | 9 | 104 | 312 | 63 | 311 | 1.75e-18 | 84.7 |
| MS.gene67066.t1 | AT3G28200 | 27.509 | 269 | 135 | 8 | 93 | 312 | 44 | 301 | 1.92e-18 | 84.7 |
| MS.gene67066.t1 | AT5G14130 | 28.975 | 283 | 132 | 8 | 86 | 312 | 46 | 315 | 3.18e-18 | 84.3 |
| MS.gene67066.t1 | AT4G17690 | 30.534 | 262 | 121 | 9 | 101 | 312 | 57 | 307 | 5.52e-18 | 83.6 |
| MS.gene67066.t1 | AT4G33420 | 29.434 | 265 | 118 | 9 | 101 | 315 | 68 | 313 | 6.38e-18 | 83.2 |
| MS.gene67066.t1 | AT4G33420 | 30.196 | 255 | 129 | 9 | 101 | 315 | 115 | 360 | 7.13e-18 | 83.6 |
| MS.gene67066.t1 | AT5G14130 | 28.975 | 283 | 132 | 8 | 86 | 312 | 87 | 356 | 8.57e-18 | 83.6 |
| MS.gene67066.t1 | AT5G58390 | 27.586 | 261 | 115 | 8 | 102 | 306 | 53 | 295 | 2.06e-17 | 81.6 |
| MS.gene67066.t1 | AT4G36430 | 27.820 | 266 | 119 | 8 | 101 | 308 | 61 | 311 | 1.35e-16 | 79.7 |
| MS.gene67066.t1 | AT3G50990 | 28.996 | 269 | 112 | 11 | 101 | 308 | 72 | 322 | 1.65e-16 | 79.3 |
| MS.gene67066.t1 | AT2G24800 | 26.357 | 258 | 133 | 8 | 104 | 312 | 65 | 314 | 3.19e-16 | 78.6 |
| MS.gene67066.t1 | AT1G24110 | 25.949 | 316 | 155 | 10 | 61 | 316 | 15 | 311 | 3.41e-16 | 78.2 |
| MS.gene67066.t1 | AT4G37520 | 29.091 | 275 | 116 | 9 | 103 | 315 | 60 | 317 | 5.00e-16 | 77.8 |
| MS.gene67066.t1 | AT5G42180 | 27.881 | 269 | 155 | 10 | 63 | 310 | 8 | 258 | 6.59e-16 | 77.4 |
| MS.gene67066.t1 | AT4G37530 | 27.241 | 290 | 130 | 10 | 88 | 315 | 47 | 317 | 7.78e-16 | 77.4 |
| MS.gene67066.t1 | AT2G18150 | 27.444 | 266 | 120 | 8 | 101 | 308 | 67 | 317 | 1.65e-15 | 76.6 |
| MS.gene67066.t1 | AT5G05340 | 26.070 | 257 | 123 | 8 | 102 | 306 | 62 | 303 | 4.64e-15 | 75.1 |
| MS.gene67066.t1 | AT3G17070 | 26.894 | 264 | 133 | 11 | 95 | 306 | 63 | 318 | 5.84e-15 | 74.7 |
| MS.gene67066.t1 | AT4G37530 | 32.515 | 163 | 85 | 6 | 88 | 234 | 47 | 200 | 5.90e-15 | 74.3 |
| MS.gene67066.t1 | AT5G19880 | 26.259 | 278 | 110 | 7 | 102 | 308 | 57 | 310 | 9.05e-15 | 74.3 |
| MS.gene67066.t1 | AT2G22420 | 26.493 | 268 | 144 | 8 | 87 | 306 | 38 | 300 | 1.11e-14 | 73.9 |
| MS.gene67066.t1 | AT2G35380 | 27.306 | 271 | 125 | 9 | 101 | 311 | 61 | 319 | 1.41e-14 | 73.9 |
| MS.gene67066.t1 | AT4G37520 | 29.091 | 275 | 113 | 10 | 103 | 315 | 60 | 314 | 4.00e-14 | 72.4 |
| MS.gene67066.t1 | AT1G77100 | 29.150 | 247 | 151 | 11 | 87 | 314 | 39 | 280 | 4.17e-14 | 72.4 |
| MS.gene67066.t1 | AT1G71695 | 25.993 | 277 | 131 | 9 | 87 | 306 | 59 | 318 | 1.35e-13 | 70.9 |
| MS.gene67066.t1 | AT1G05240 | 31.718 | 227 | 116 | 9 | 98 | 298 | 54 | 267 | 2.24e-13 | 70.1 |
| MS.gene67066.t1 | AT1G05250 | 31.718 | 227 | 116 | 9 | 98 | 298 | 54 | 267 | 2.24e-13 | 70.1 |
| MS.gene67066.t1 | AT2G41480 | 34.286 | 140 | 77 | 4 | 103 | 234 | 62 | 194 | 7.13e-13 | 68.6 |
| MS.gene67066.t1 | AT3G21770 | 31.724 | 145 | 81 | 5 | 101 | 234 | 60 | 197 | 1.43e-12 | 67.8 |
| MS.gene67066.t1 | AT3G17070 | 27.854 | 219 | 114 | 9 | 131 | 306 | 38 | 255 | 2.02e-12 | 67.0 |
| MS.gene67066.t1 | AT1G44970 | 27.692 | 260 | 128 | 10 | 101 | 308 | 76 | 327 | 2.81e-12 | 67.0 |
| MS.gene67066.t1 | AT5G67400 | 26.471 | 272 | 121 | 9 | 103 | 312 | 60 | 314 | 9.54e-12 | 65.5 |
| MS.gene67066.t1 | AT4G08780 | 26.692 | 266 | 121 | 10 | 101 | 306 | 55 | 306 | 1.15e-11 | 65.1 |
| MS.gene67066.t1 | AT3G32980 | 34.868 | 152 | 70 | 6 | 101 | 234 | 62 | 202 | 1.51e-11 | 65.1 |
| MS.gene67066.t1 | AT4G08770 | 27.132 | 258 | 130 | 10 | 101 | 306 | 55 | 306 | 2.03e-11 | 64.3 |
| MS.gene67066.t1 | AT1G05260 | 31.677 | 161 | 89 | 6 | 101 | 250 | 57 | 207 | 4.46e-11 | 63.2 |
| MS.gene67066.t1 | AT4G33870 | 30.128 | 156 | 100 | 5 | 87 | 234 | 83 | 237 | 5.38e-11 | 63.5 |
Find 61 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACACATGACGGTTGTAATT+TGG | 0.179181 | 3.4:-93189261 | None:intergenic |
| TTCATATTATAAGGTTCTTT+TGG | 0.228709 | 3.4:+93192169 | MS.gene67066:CDS |
| CGCTCCGACCATGCTTCTTC+AGG | 0.236229 | 3.4:+93189299 | MS.gene67066:CDS |
| GAGGAAACTCTTGATGCTTC+TGG | 0.303467 | 3.4:+93191657 | MS.gene67066:CDS |
| CTTTACCTTTGTTAGTATCC+TGG | 0.313796 | 3.4:+93191243 | MS.gene67066:intron |
| GAGAAGCCATGGACGCCTTC+TGG | 0.322202 | 3.4:+93192191 | MS.gene67066:CDS |
| ACTCTTGGAAGTAAAGGTTT+TGG | 0.369606 | 3.4:+93192125 | MS.gene67066:CDS |
| CGTATTGTGCAGTGCGCATC+AGG | 0.370162 | 3.4:+93189218 | MS.gene67066:CDS |
| GGCTGCAGGTGTGCTTCGTT+TGG | 0.388465 | 3.4:+93190176 | MS.gene67066:CDS |
| GGAAGTTTCCCTTCAGGATC+AGG | 0.389840 | 3.4:-93191633 | None:intergenic |
| TCCTCGGGAAGTTTCCCTTC+AGG | 0.392970 | 3.4:-93191639 | None:intergenic |
| TATGTCAAGCTGGTGAATTC+TGG | 0.399120 | 3.4:+93193519 | MS.gene67066:CDS |
| TTTGAAATTGATGACAATAC+AGG | 0.426747 | 3.4:+93190219 | MS.gene67066:CDS |
| TTTACCTTTGTTAGTATCCT+GGG | 0.437764 | 3.4:+93191244 | MS.gene67066:intron |
| TATGAATTGTCAAAAGAAGT+AGG | 0.453434 | 3.4:-93192152 | None:intergenic |
| TTTCAAAAGTTCCAGCATCA+TGG | 0.457488 | 3.4:-93190203 | None:intergenic |
| TTGTCTGGAGCTCACACTCT+TGG | 0.477240 | 3.4:+93192110 | MS.gene67066:CDS |
| TTGAGGATGATGAATGCTTA+AGG | 0.477644 | 3.4:+93192382 | MS.gene67066:CDS |
| CAAGAACTAGTAGCTTTGTC+TGG | 0.485206 | 3.4:+93192095 | MS.gene67066:CDS |
| GCGGACGTTATTGCTGTGGC+TGG | 0.487431 | 3.4:+93191266 | MS.gene67066:CDS |
| CATGACGGTTGTAATTTGGC+GGG | 0.504477 | 3.4:-93189257 | None:intergenic |
| GGGTGCTTACGGCATGGCGT+TGG | 0.513752 | 3.4:-93189505 | None:intergenic |
| TTGAGGAAGGTATTGACAAA+GGG | 0.514007 | 3.4:+93190150 | MS.gene67066:CDS |
| ACATGACGGTTGTAATTTGG+CGG | 0.514760 | 3.4:-93189258 | None:intergenic |
| ATGAATTGTCAAAAGAAGTA+GGG | 0.515097 | 3.4:-93192151 | None:intergenic |
| TTCAGATCACGCACTTGTTG+AGG | 0.515812 | 3.4:+93192365 | MS.gene67066:CDS |
| CCGAGCGAAACTGTGATAGT+AGG | 0.518423 | 3.4:-93191317 | None:intergenic |
| GTTGTTGTAGGTGGTATGAA+TGG | 0.519310 | 3.4:+93190876 | MS.gene67066:intron |
| AGAAGCATCAAGAGTTTCCT+CGG | 0.519712 | 3.4:-93191655 | None:intergenic |
| CTGATGCGCACTGCACAATA+CGG | 0.521753 | 3.4:-93189217 | None:intergenic |
| TTGACAAAGGGAAAGGCTGC+AGG | 0.522171 | 3.4:+93190162 | MS.gene67066:CDS |
| GCTCACACTCTTGGAAGTAA+AGG | 0.522477 | 3.4:+93192119 | MS.gene67066:CDS |
| AGAAGCAAAGATATGAGTGA+GGG | 0.525513 | 3.4:-93189475 | None:intergenic |
| GAGAAGCAAAGATATGAGTG+AGG | 0.527735 | 3.4:-93189476 | None:intergenic |
| GTTGAGGAAGGTATTGACAA+AGG | 0.532606 | 3.4:+93190149 | MS.gene67066:CDS |
| CACAGCAATAACGTCCGCCC+AGG | 0.540378 | 3.4:-93191261 | None:intergenic |
| CAGATAGATGCTATCCATCC+AGG | 0.541954 | 3.4:+93191154 | MS.gene67066:CDS |
| ACTTTACCAGAAGGCGTCCA+TGG | 0.549342 | 3.4:-93192197 | None:intergenic |
| CTCACCTGAAGAAGCATGGT+CGG | 0.559728 | 3.4:-93189303 | None:intergenic |
| TCAACAAGTGCGTGATCTGA+AGG | 0.564701 | 3.4:-93192363 | None:intergenic |
| CTTGAAAGACCTGAAAATGC+TGG | 0.570720 | 3.4:+93190915 | MS.gene67066:CDS |
| AGGTTTCAAGTAGTAGCAGT+AGG | 0.580648 | 3.4:+93189406 | MS.gene67066:CDS |
| GGTGGTATGTCGACTATGAT+CGG | 0.580931 | 3.4:+93192336 | MS.gene67066:intron |
| TTCTAATTAAACAAGAGTTG+AGG | 0.581889 | 3.4:+93190133 | MS.gene67066:CDS |
| GCTGAAGCAGTTGAAGTATG+TGG | 0.592512 | 3.4:+93191290 | MS.gene67066:CDS |
| GAAGCATCAAGAGTTTCCTC+GGG | 0.599360 | 3.4:-93191654 | None:intergenic |
| GAAGCAAAGATATGAGTGAG+GGG | 0.603163 | 3.4:-93189474 | None:intergenic |
| CCTACTATCACAGTTTCGCT+CGG | 0.605954 | 3.4:+93191317 | MS.gene67066:CDS |
| CTCACTCACCTGAAGAAGCA+TGG | 0.606221 | 3.4:-93189307 | None:intergenic |
| AGAGAAAACAAGGACCTGGA+TGG | 0.607635 | 3.4:-93191168 | None:intergenic |
| ATTGTGCAGTGCGCATCAGG+TGG | 0.617666 | 3.4:+93189221 | MS.gene67066:CDS |
| GAAGGTATTGACAAAGGGAA+AGG | 0.621122 | 3.4:+93190155 | MS.gene67066:CDS |
| TGAGTGAGGGGAAGAAGACA+TGG | 0.622960 | 3.4:-93189462 | None:intergenic |
| AATTAAACAAGAGTTGAGGA+AGG | 0.623996 | 3.4:+93190137 | MS.gene67066:CDS |
| CTGGGCGGACGTTATTGCTG+TGG | 0.636998 | 3.4:+93191262 | MS.gene67066:CDS |
| AAGTAGTAGCAGTAGGAGAG+CGG | 0.646507 | 3.4:+93189413 | MS.gene67066:CDS |
| TGGTGAATTCTGGTGTGAAG+TGG | 0.657138 | 3.4:+93193529 | MS.gene67066:CDS |
| TTAACAGTTGACACACATGA+CGG | 0.670912 | 3.4:-93189272 | None:intergenic |
| TCCTGAAGGGAAACTTCCCG+AGG | 0.679146 | 3.4:+93191638 | MS.gene67066:CDS |
| GAAGCAGTTGAAGTATGTGG+AGG | 0.696962 | 3.4:+93191293 | MS.gene67066:CDS |
| ACCTTTGTTAGTATCCTGGG+CGG | 0.708491 | 3.4:+93191247 | MS.gene67066:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATGAATGAAAATATTAT+AGG | - | chr3.4:93191599-93191618 | None:intergenic | 10.0% |
| !! | AATTCATTAAATCTATATTA+AGG | + | chr3.4:93189545-93189564 | MS.gene67066:intron | 10.0% |
| !!! | AATATTTTCATTCATATTAA+TGG | + | chr3.4:93191601-93191620 | MS.gene67066:intron | 10.0% |
| !!! | TTTTTTTACTTTCTTTTATT+GGG | + | chr3.4:93189965-93189984 | MS.gene67066:intron | 10.0% |
| !!! | TTTTTTTTACTTTCTTTTAT+TGG | + | chr3.4:93189964-93189983 | MS.gene67066:intron | 10.0% |
| !! | TAGATTTAATGAATTAATAC+AGG | - | chr3.4:93189540-93189559 | None:intergenic | 15.0% |
| !! | TTCAGTAAAAAAAATCAAAA+CGG | - | chr3.4:93190455-93190474 | None:intergenic | 15.0% |
| !!! | AAAGGTAAAGTAAATTTTAT+TGG | - | chr3.4:93191233-93191252 | None:intergenic | 15.0% |
| !!! | ATTTTAAATTTCAACTAGAA+CGG | - | chr3.4:93192758-93192777 | None:intergenic | 15.0% |
| !!! | GATATTTTTTTATGTTTTCT+TGG | + | chr3.4:93190741-93190760 | MS.gene67066:intron | 15.0% |
| !!! | TAAGGAATTTTTTTTTTTGA+AGG | - | chr3.4:93192823-93192842 | None:intergenic | 15.0% |
| !!! | TCATAACTTTTTTTTTTAAG+AGG | - | chr3.4:93191775-93191794 | None:intergenic | 15.0% |
| !!! | TTTTGACAATTCATATTATA+AGG | + | chr3.4:93192160-93192179 | MS.gene67066:CDS | 15.0% |
| !!! | TTTTTTACTTTCTTTTATTG+GGG | + | chr3.4:93189966-93189985 | MS.gene67066:intron | 15.0% |
| !! | AACAAGCTAATAAATATGAT+AGG | - | chr3.4:93192254-93192273 | None:intergenic | 20.0% |
| !! | AACAATTGAAAACAATACTT+TGG | + | chr3.4:93192577-93192596 | MS.gene67066:intron | 20.0% |
| !! | AATGAAAATATTATAGGCAA+AGG | - | chr3.4:93191593-93191612 | None:intergenic | 20.0% |
| !! | ACATAAAAAAATGAATCCTA+AGG | - | chr3.4:93193265-93193284 | None:intergenic | 20.0% |
| !! | AGCTCAAATAAAACAATTTA+AGG | - | chr3.4:93189749-93189768 | None:intergenic | 20.0% |
| !! | ATTAGTGATTAATTACTTCT+TGG | + | chr3.4:93192651-93192670 | MS.gene67066:intron | 20.0% |
| !! | TAATGAATTAATACAGGAAT+GGG | - | chr3.4:93189534-93189553 | None:intergenic | 20.0% |
| !! | TATTCAAGTAATAAACGTAA+AGG | - | chr3.4:93190999-93191018 | None:intergenic | 20.0% |
| !! | TCATTCATATTAATGGTATA+GGG | + | chr3.4:93191608-93191627 | MS.gene67066:intron | 20.0% |
| !! | TCTGAGCAAAAAAAATAAAT+TGG | + | chr3.4:93190709-93190728 | MS.gene67066:intron | 20.0% |
| !! | TTAATGAATTAATACAGGAA+TGG | - | chr3.4:93189535-93189554 | None:intergenic | 20.0% |
| !! | TTCATGTAGATTTAATTCAT+GGG | + | chr3.4:93191539-93191558 | MS.gene67066:intron | 20.0% |
| !! | TTCATTCATATTAATGGTAT+AGG | + | chr3.4:93191607-93191626 | MS.gene67066:intron | 20.0% |
| !!! | AACTTTATTTATTGAACAGA+TGG | + | chr3.4:93193442-93193461 | MS.gene67066:intron | 20.0% |
| !!! | AATATATAAAAGGAGTATAC+AGG | + | chr3.4:93192948-93192967 | MS.gene67066:intron | 20.0% |
| !!! | ATATATAAAAGGAGTATACA+GGG | + | chr3.4:93192949-93192968 | MS.gene67066:intron | 20.0% |
| !!! | GTTGAATATTATTCAGTTTT+AGG | + | chr3.4:93190390-93190409 | MS.gene67066:intron | 20.0% |
| !!! | TTCATATTATAAGGTTCTTT+TGG | + | chr3.4:93192169-93192188 | MS.gene67066:CDS | 20.0% |
| !!! | TTTTAAATTTCAACTAGAAC+GGG | - | chr3.4:93192757-93192776 | None:intergenic | 20.0% |
| !!! | TTTTATAGAAAGAATATTCG+CGG | - | chr3.4:93191826-93191845 | None:intergenic | 20.0% |
| ! | AAAAAAAATCAAAACGGTAC+TGG | - | chr3.4:93190449-93190468 | None:intergenic | 25.0% |
| ! | AACACAAATGCAAAGTAAAT+GGG | - | chr3.4:93191734-93191753 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAATAGTTGA+TGG | - | chr3.4:93189828-93189847 | None:intergenic | 25.0% |
| ! | AATCTATATTAAGGCCTATT+TGG | + | chr3.4:93189554-93189573 | MS.gene67066:intron | 25.0% |
| ! | AATCTATCCTAAAGAGTTTA+TGG | - | chr3.4:93189852-93189871 | None:intergenic | 25.0% |
| ! | AATTTACACTAATGATGTAG+AGG | + | chr3.4:93189386-93189405 | MS.gene67066:intron | 25.0% |
| ! | AATTTCTTGATCACCTAATT+TGG | + | chr3.4:93190505-93190524 | MS.gene67066:intron | 25.0% |
| ! | ATCAAGAAATTCAAAAAGTC+TGG | - | chr3.4:93191041-93191060 | None:intergenic | 25.0% |
| ! | ATGAATTGTCAAAAGAAGTA+GGG | - | chr3.4:93192154-93192173 | None:intergenic | 25.0% |
| ! | ATGTGCTAATATTTGTCATT+GGG | + | chr3.4:93191993-93192012 | MS.gene67066:intron | 25.0% |
| ! | ATTCATATTAATGGTATAGG+GGG | + | chr3.4:93191610-93191629 | MS.gene67066:intron | 25.0% |
| ! | CATTCATATTAATGGTATAG+GGG | + | chr3.4:93191609-93191628 | MS.gene67066:intron | 25.0% |
| ! | CTTATTTCCATAAACTCTTT+AGG | + | chr3.4:93189842-93189861 | MS.gene67066:intron | 25.0% |
| ! | CTTCATGTAGATTTAATTCA+TGG | + | chr3.4:93191538-93191557 | MS.gene67066:intron | 25.0% |
| ! | GAAATCTGAATCTTGTATAA+AGG | + | chr3.4:93190325-93190344 | MS.gene67066:intron | 25.0% |
| ! | TAACACAAATGCAAAGTAAA+TGG | - | chr3.4:93191735-93191754 | None:intergenic | 25.0% |
| ! | TATGAATTGTCAAAAGAAGT+AGG | - | chr3.4:93192155-93192174 | None:intergenic | 25.0% |
| ! | TCAAATAAGTCAATCCAAAT+AGG | - | chr3.4:93189571-93189590 | None:intergenic | 25.0% |
| ! | TCACAAAAAATAAATGCAGT+GGG | - | chr3.4:93192457-93192476 | None:intergenic | 25.0% |
| ! | TGTGAAAGAAAAGTTTCAAA+TGG | - | chr3.4:93192070-93192089 | None:intergenic | 25.0% |
| ! | TTAGTCATTTACTACATAAG+AGG | - | chr3.4:93193327-93193346 | None:intergenic | 25.0% |
| ! | TTCACAAAAAATAAATGCAG+TGG | - | chr3.4:93192458-93192477 | None:intergenic | 25.0% |
| ! | TTCTAATTAAACAAGAGTTG+AGG | + | chr3.4:93190133-93190152 | MS.gene67066:CDS | 25.0% |
| !! | ATGTCAGTTTTCAAATAGTA+AGG | + | chr3.4:93192776-93192795 | MS.gene67066:intron | 25.0% |
| !! | TTTGAAATTGATGACAATAC+AGG | + | chr3.4:93190219-93190238 | MS.gene67066:CDS | 25.0% |
| !!! | AAACTCTTTAGGATAGATTA+AGG | + | chr3.4:93189853-93189872 | MS.gene67066:intron | 25.0% |
| !!! | ATGGTATTTTAGAAATGTAG+AGG | - | chr3.4:93193085-93193104 | None:intergenic | 25.0% |
| !!! | GGAATTTTTTTTTTTGAAGG+AGG | - | chr3.4:93192820-93192839 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAAGTTATCT+TGG | - | chr3.4:93189665-93189684 | None:intergenic | 25.0% |
| !!! | TATTTTAGAAATGTAGAGGT+GGG | - | chr3.4:93193081-93193100 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGAAGGAGGTTA+AGG | - | chr3.4:93192814-93192833 | None:intergenic | 25.0% |
| AATAAAATACCCGTGTTGAA+AGG | + | chr3.4:93190352-93190371 | MS.gene67066:intron | 30.0% | |
| AATAAACGTAAAGGAGAAGA+AGG | - | chr3.4:93190990-93191009 | None:intergenic | 30.0% | |
| AATTAAACAAGAGTTGAGGA+AGG | + | chr3.4:93190137-93190156 | MS.gene67066:CDS | 30.0% | |
| AATTAATACAGGAATGGGAT+TGG | - | chr3.4:93189529-93189548 | None:intergenic | 30.0% | |
| ACAAATTACCAGAGAAAACA+AGG | - | chr3.4:93191181-93191200 | None:intergenic | 30.0% | |
| ACATCTGAAAAAATGTTGAG+GGG | + | chr3.4:93193196-93193215 | MS.gene67066:intron | 30.0% | |
| ACTAGGATCTCAATTCAAAA+AGG | + | chr3.4:93192488-93192507 | MS.gene67066:intron | 30.0% | |
| ATAAACGTAAAGGAGAAGAA+GGG | - | chr3.4:93190989-93191008 | None:intergenic | 30.0% | |
| ATAGCAAGTGTTTATGCTAA+TGG | - | chr3.4:93189775-93189794 | None:intergenic | 30.0% | |
| ATAGTTTCATCACAAGTAAC+AGG | + | chr3.4:93190766-93190785 | MS.gene67066:intron | 30.0% | |
| ATATAAAATCAGGTTTACCG+TGG | - | chr3.4:93190567-93190586 | None:intergenic | 30.0% | |
| ATGCATGAGCAAAATTATTC+TGG | - | chr3.4:93192041-93192060 | None:intergenic | 30.0% | |
| ATTAATACAGGAATGGGATT+GGG | - | chr3.4:93189528-93189547 | None:intergenic | 30.0% | |
| ATTCCTTAACCAAATAGTGA+TGG | + | chr3.4:93192835-93192854 | MS.gene67066:intron | 30.0% | |
| CAACTTGGCAATATAAAATC+AGG | - | chr3.4:93190577-93190596 | None:intergenic | 30.0% | |
| CAAGATTCAGATTTCTTCAT+CGG | - | chr3.4:93190320-93190339 | None:intergenic | 30.0% | |
| CAATGACAAATATTAGCACA+TGG | - | chr3.4:93191994-93192013 | None:intergenic | 30.0% | |
| CACAAAAAATAAATGCAGTG+GGG | - | chr3.4:93192456-93192475 | None:intergenic | 30.0% | |
| CATAGACATTACATACAACT+TGG | - | chr3.4:93190592-93190611 | None:intergenic | 30.0% | |
| CATGTGCTAATATTTGTCAT+TGG | + | chr3.4:93191992-93192011 | MS.gene67066:intron | 30.0% | |
| GTCTATGTCTATTATCAATG+TGG | + | chr3.4:93190605-93190624 | MS.gene67066:intron | 30.0% | |
| TAATATCAGTCCTTTCAACA+CGG | - | chr3.4:93190365-93190384 | None:intergenic | 30.0% | |
| TAGGTGATCAAGAAATTAAG+CGG | - | chr3.4:93190502-93190521 | None:intergenic | 30.0% | |
| TGCTTGTCATATCCTATATA+CGG | - | chr3.4:93191387-93191406 | None:intergenic | 30.0% | |
| TGGTCTGAAAAAATCAGTAA+AGG | + | chr3.4:93190935-93190954 | MS.gene67066:CDS | 30.0% | |
| TGTGTGTATTACTATTGGAT+TGG | + | chr3.4:93189992-93190011 | MS.gene67066:intron | 30.0% | |
| TGTTCTTTATACAACAGCAT+GGG | - | chr3.4:93191494-93191513 | None:intergenic | 30.0% | |
| TTGTACTATGTAAAACTCCA+CGG | + | chr3.4:93190547-93190566 | MS.gene67066:intron | 30.0% | |
| TTGTCTGTTTATGTTGTTGT+AGG | + | chr3.4:93190864-93190883 | MS.gene67066:intron | 30.0% | |
| TTGTTCTTTATACAACAGCA+TGG | - | chr3.4:93191495-93191514 | None:intergenic | 30.0% | |
| TTTACCTTTGTTAGTATCCT+GGG | + | chr3.4:93191244-93191263 | MS.gene67066:intron | 30.0% | |
| ! | ACTACATAAGAGGTTCTTTT+AGG | - | chr3.4:93193317-93193336 | None:intergenic | 30.0% |
| ! | AGAAGATATTCTTTTGTACC+TGG | - | chr3.4:93190117-93190136 | None:intergenic | 30.0% |
| ! | GAGTTTTACATAGTACAACA+GGG | - | chr3.4:93190545-93190564 | None:intergenic | 30.0% |
| ! | GGAGGTTAAGGAAATTTTTA+TGG | - | chr3.4:93192802-93192821 | None:intergenic | 30.0% |
| ! | GGATTTATCACATGTTGTTT+AGG | + | chr3.4:93191111-93191130 | MS.gene67066:intron | 30.0% |
| ! | TACTATTGGATTGGATTAGA+GGG | + | chr3.4:93190001-93190020 | MS.gene67066:intron | 30.0% |
| ! | TTACTATTGGATTGGATTAG+AGG | + | chr3.4:93190000-93190019 | MS.gene67066:intron | 30.0% |
| ! | TTTACTTCTGAAAACGTGTA+TGG | - | chr3.4:93193104-93193123 | None:intergenic | 30.0% |
| !! | ATTTTAGAAATGTAGAGGTG+GGG | - | chr3.4:93193080-93193099 | None:intergenic | 30.0% |
| !! | GAAGCTGTTTCTTTCTAAAA+TGG | - | chr3.4:93191522-93191541 | None:intergenic | 30.0% |
| !! | GTATTTTAGAAATGTAGAGG+TGG | - | chr3.4:93193082-93193101 | None:intergenic | 30.0% |
| !!! | CATCTTATATTTTAATCGCC+AGG | + | chr3.4:93191070-93191089 | MS.gene67066:intron | 30.0% |
| !!! | CATGTCATAAGCTGTTTTTA+TGG | - | chr3.4:93189606-93189625 | None:intergenic | 30.0% |
| !!! | GAAAGTTTTAAAATGCTCAC+AGG | + | chr3.4:93193223-93193242 | MS.gene67066:intron | 30.0% |
| AAAATGCATACCCTGGTTAA+AGG | + | chr3.4:93193044-93193063 | MS.gene67066:intron | 35.0% | |
| AAGAGATGCTTCCAGAAAAA+AGG | + | chr3.4:93191684-93191703 | MS.gene67066:CDS | 35.0% | |
| AATATCAGTCCTTTCAACAC+GGG | - | chr3.4:93190364-93190383 | None:intergenic | 35.0% | |
| ACAGGGAAAATTACAGAGTT+GGG | + | chr3.4:93192966-93192985 | MS.gene67066:intron | 35.0% | |
| ACCAGACAATCATCAACTTA+CGG | - | chr3.4:93191356-93191375 | None:intergenic | 35.0% | |
| ACGACTCTCATGTTAAGTTA+TGG | - | chr3.4:93191869-93191888 | None:intergenic | 35.0% | |
| AGAAGCAAAGATATGAGTGA+GGG | - | chr3.4:93189478-93189497 | None:intergenic | 35.0% | |
| AGTTAAAACCAGAGCAACAA+AGG | + | chr3.4:93191934-93191953 | MS.gene67066:intron | 35.0% | |
| AGTTATGGATGATCAGCAAT+TGG | - | chr3.4:93191854-93191873 | None:intergenic | 35.0% | |
| ATCCATATAAGCAAACAACG+AGG | + | chr3.4:93193289-93193308 | MS.gene67066:intron | 35.0% | |
| ATGTAATTCAAGCGTTTGCT+CGG | + | chr3.4:93190653-93190672 | MS.gene67066:intron | 35.0% | |
| CAAAGGTGAACATTGGTATT+GGG | - | chr3.4:93193007-93193026 | None:intergenic | 35.0% | |
| CAGCTTATGACATGTTCATT+AGG | + | chr3.4:93189612-93189631 | MS.gene67066:intron | 35.0% | |
| CTCGTAAGTAATGCAAATTG+AGG | - | chr3.4:93193422-93193441 | None:intergenic | 35.0% | |
| CTGTATAAAAGAGAACCAGT+GGG | - | chr3.4:93192317-93192336 | None:intergenic | 35.0% | |
| CTTCATAATGCGTAAAAGCA+AGG | - | chr3.4:93190093-93190112 | None:intergenic | 35.0% | |
| CTTTACCTTTGTTAGTATCC+TGG | + | chr3.4:93191243-93191262 | MS.gene67066:intron | 35.0% | |
| CTTTGCATTTGTGTTATGCA+TGG | + | chr3.4:93191739-93191758 | MS.gene67066:intron | 35.0% | |
| GCATGTGACAATTAATATCC+CGG | + | chr3.4:93193359-93193378 | MS.gene67066:intron | 35.0% | |
| GGCATTGTGTGTATTACTAT+TGG | + | chr3.4:93189987-93190006 | MS.gene67066:intron | 35.0% | |
| GGGTCAAACACATACAATAT+GGG | + | chr3.4:93192877-93192896 | MS.gene67066:intron | 35.0% | |
| GGTCAAACACATACAATATG+GGG | + | chr3.4:93192878-93192897 | MS.gene67066:intron | 35.0% | |
| GTTCCATCACTATTTGGTTA+AGG | - | chr3.4:93192841-93192860 | None:intergenic | 35.0% | |
| TAAACGTAAAGGAGAAGAAG+GGG | - | chr3.4:93190988-93191007 | None:intergenic | 35.0% | |
| TACAGGGAAAATTACAGAGT+TGG | + | chr3.4:93192965-93192984 | MS.gene67066:intron | 35.0% | |
| TCTGTTTATGTTGTTGTAGG+TGG | + | chr3.4:93190867-93190886 | MS.gene67066:intron | 35.0% | |
| TGTATGGGTAAATTTGCACA+AGG | + | chr3.4:93190686-93190705 | MS.gene67066:intron | 35.0% | |
| TTAACAGTTGACACACATGA+CGG | - | chr3.4:93189275-93189294 | None:intergenic | 35.0% | |
| TTGAGGATGATGAATGCTTA+AGG | + | chr3.4:93192382-93192401 | MS.gene67066:CDS | 35.0% | |
| TTTCAAAAGTTCCAGCATCA+TGG | - | chr3.4:93190206-93190225 | None:intergenic | 35.0% | |
| ! | ACTCTTGGAAGTAAAGGTTT+TGG | + | chr3.4:93192125-93192144 | MS.gene67066:CDS | 35.0% |
| ! | AGCGCTTCATTCTAAAGAAA+TGG | + | chr3.4:93189924-93189943 | MS.gene67066:intron | 35.0% |
| ! | GGAGTTTTACATAGTACAAC+AGG | - | chr3.4:93190546-93190565 | None:intergenic | 35.0% |
| ! | GTGTTATGCATGGATGATTT+TGG | + | chr3.4:93191749-93191768 | MS.gene67066:intron | 35.0% |
| ! | TTTTACGCATTATGAAGACC+AGG | + | chr3.4:93190096-93190115 | MS.gene67066:intron | 35.0% |
| !! | ACTTGTTGTTTGTCATCCTT+AGG | - | chr3.4:93191425-93191444 | None:intergenic | 35.0% |
| !! | TGAGTTGTTACTTTACCAGA+AGG | - | chr3.4:93192209-93192228 | None:intergenic | 35.0% |
| !! | TTGAGGAAGGTATTGACAAA+GGG | + | chr3.4:93190150-93190169 | MS.gene67066:CDS | 35.0% |
| !! | TTTCTGGTTCCATCACTATT+TGG | - | chr3.4:93192847-93192866 | None:intergenic | 35.0% |
| !! | TTTTTCAGACCAGCATTTTC+AGG | - | chr3.4:93190927-93190946 | None:intergenic | 35.0% |
| !!! | CTCACGAAAAACCTTTTTTC+TGG | - | chr3.4:93191698-93191717 | None:intergenic | 35.0% |
| !!! | TGTTGCTCTGGTTTTAACTT+AGG | - | chr3.4:93191933-93191952 | None:intergenic | 35.0% |
| AAAACACTACCCAGCAGATT+TGG | - | chr3.4:93189347-93189366 | None:intergenic | 40.0% | |
| AAACAGATACTCCAGACACA+AGG | - | chr3.4:93192699-93192718 | None:intergenic | 40.0% | |
| AAATGCTCACAGGTGTTTGT+TGG | + | chr3.4:93193233-93193252 | MS.gene67066:intron | 40.0% | |
| AAATTTGCCGCCTTTAACCA+GGG | - | chr3.4:93193057-93193076 | None:intergenic | 40.0% | |
| AATGCTCACAGGTGTTTGTT+GGG | + | chr3.4:93193234-93193253 | MS.gene67066:intron | 40.0% | |
| ACAATTAATATCCCGGTGCA+CGG | + | chr3.4:93193366-93193385 | MS.gene67066:intron | 40.0% | |
| ACATGACGGTTGTAATTTGG+CGG | - | chr3.4:93189261-93189280 | None:intergenic | 40.0% | |
| ATCCTTAGGAGAAAAGATCG+CGG | - | chr3.4:93191411-93191430 | None:intergenic | 40.0% | |
| CAAAAACGTGTATGTCAAGC+TGG | + | chr3.4:93193509-93193528 | MS.gene67066:CDS | 40.0% | |
| CAAGGGAAATGCAAATGCAA+AGG | - | chr3.4:93193024-93193043 | None:intergenic | 40.0% | |
| CACACATGACGGTTGTAATT+TGG | - | chr3.4:93189264-93189283 | None:intergenic | 40.0% | |
| CACCTCGTTGTTTGCTTATA+TGG | - | chr3.4:93193294-93193313 | None:intergenic | 40.0% | |
| CATGGGCATAACTCAAAAGT+AGG | - | chr3.4:93191477-93191496 | None:intergenic | 40.0% | |
| CATGTGCTTGATGCCAAATT+AGG | - | chr3.4:93190521-93190540 | None:intergenic | 40.0% | |
| CCTGTATAAAAGAGAACCAG+TGG | - | chr3.4:93192318-93192337 | None:intergenic | 40.0% | |
| CTAATTTGGCATCAAGCACA+TGG | + | chr3.4:93190519-93190538 | MS.gene67066:intron | 40.0% | |
| CTTGAAAGACCTGAAAATGC+TGG | + | chr3.4:93190915-93190934 | MS.gene67066:CDS | 40.0% | |
| GAAGCAAAGATATGAGTGAG+GGG | - | chr3.4:93189477-93189496 | None:intergenic | 40.0% | |
| GAGAAGCAAAGATATGAGTG+AGG | - | chr3.4:93189479-93189498 | None:intergenic | 40.0% | |
| GCAAAGGTGAACATTGGTAT+TGG | - | chr3.4:93193008-93193027 | None:intergenic | 40.0% | |
| GCAAATGCAAAGGTGAACAT+TGG | - | chr3.4:93193014-93193033 | None:intergenic | 40.0% | |
| GCTATAATTGACATGCTCGT+TGG | + | chr3.4:93190054-93190073 | MS.gene67066:intron | 40.0% | |
| GGGGTCAAACACATACAATA+TGG | + | chr3.4:93192876-93192895 | MS.gene67066:intron | 40.0% | |
| GTTAGTAAGTTCCTTGTGTC+TGG | + | chr3.4:93192685-93192704 | MS.gene67066:intron | 40.0% | |
| GTTGTTGTAGGTGGTATGAA+TGG | + | chr3.4:93190876-93190895 | MS.gene67066:intron | 40.0% | |
| TAAAACCAGAGCAACAAAGG+AGG | + | chr3.4:93191937-93191956 | MS.gene67066:intron | 40.0% | |
| TATGTCAAGCTGGTGAATTC+TGG | + | chr3.4:93193519-93193538 | MS.gene67066:CDS | 40.0% | |
| TGAAAAAATGTTGAGGGGCA+TGG | + | chr3.4:93193201-93193220 | MS.gene67066:intron | 40.0% | |
| TGGTACTCTAGTCCGTATAT+AGG | + | chr3.4:93191372-93191391 | MS.gene67066:intron | 40.0% | |
| ! | AACCAGGGTATGCATTTTCA+AGG | - | chr3.4:93193042-93193061 | None:intergenic | 40.0% |
| ! | ACAGGTATACATCTAGCTCA+GGG | + | chr3.4:93190237-93190256 | MS.gene67066:intron | 40.0% |
| ! | ACCAGGGTATGCATTTTCAA+GGG | - | chr3.4:93193041-93193060 | None:intergenic | 40.0% |
| ! | AGGTTTCAAGTAGTAGCAGT+AGG | + | chr3.4:93189406-93189425 | MS.gene67066:CDS | 40.0% |
| ! | ATTTTCCTCCTTTGTTGCTC+TGG | - | chr3.4:93191945-93191964 | None:intergenic | 40.0% |
| ! | GTGAACATTGGTATTGGGTA+TGG | - | chr3.4:93193002-93193021 | None:intergenic | 40.0% |
| ! | TACAGGTATACATCTAGCTC+AGG | + | chr3.4:93190236-93190255 | MS.gene67066:intron | 40.0% |
| ! | TCTAGATGCCATAGTTTGTC+TGG | + | chr3.4:93193126-93193145 | MS.gene67066:intron | 40.0% |
| !! | ACCGTAAGTTGATGATTGTC+TGG | + | chr3.4:93191352-93191371 | MS.gene67066:intron | 40.0% |
| !! | AGAAGCATCAAGAGTTTCCT+CGG | - | chr3.4:93191658-93191677 | None:intergenic | 40.0% |
| !! | CAAGAACTAGTAGCTTTGTC+TGG | + | chr3.4:93192095-93192114 | MS.gene67066:CDS | 40.0% |
| !! | CTGGTTCTCTTTTATACAGG+TGG | + | chr3.4:93192318-93192337 | MS.gene67066:intron | 40.0% |
| !! | GAAGGTATTGACAAAGGGAA+AGG | + | chr3.4:93190155-93190174 | MS.gene67066:CDS | 40.0% |
| !! | GTTGAGGAAGGTATTGACAA+AGG | + | chr3.4:93190149-93190168 | MS.gene67066:CDS | 40.0% |
| !!! | CCACTGGTTCTCTTTTATAC+AGG | + | chr3.4:93192315-93192334 | MS.gene67066:intron | 40.0% |
| !!! | TTTTTTTCACTCTCACCCAC+TGG | + | chr3.4:93192299-93192318 | MS.gene67066:intron | 40.0% |
| AAGTAGTAGCAGTAGGAGAG+CGG | + | chr3.4:93189413-93189432 | MS.gene67066:CDS | 45.0% | |
| ACCTTTGTTAGTATCCTGGG+CGG | + | chr3.4:93191247-93191266 | MS.gene67066:intron | 45.0% | |
| AGAGAAAACAAGGACCTGGA+TGG | - | chr3.4:93191171-93191190 | None:intergenic | 45.0% | |
| ATGCATACCCTGGTTAAAGG+CGG | + | chr3.4:93193047-93193066 | MS.gene67066:intron | 45.0% | |
| CAGATAGATGCTATCCATCC+AGG | + | chr3.4:93191154-93191173 | MS.gene67066:CDS | 45.0% | |
| CATGACGGTTGTAATTTGGC+GGG | - | chr3.4:93189260-93189279 | None:intergenic | 45.0% | |
| CCTACTATCACAGTTTCGCT+CGG | + | chr3.4:93191317-93191336 | MS.gene67066:CDS | 45.0% | |
| CTCGGCAATTGCATCTGTAT+GGG | + | chr3.4:93190671-93190690 | MS.gene67066:intron | 45.0% | |
| CTTGTACCTCCAAATCTGCT+GGG | + | chr3.4:93189335-93189354 | MS.gene67066:intron | 45.0% | |
| GAAATTTGCCGCCTTTAACC+AGG | - | chr3.4:93193058-93193077 | None:intergenic | 45.0% | |
| GAAGCAGTTGAAGTATGTGG+AGG | + | chr3.4:93191293-93191312 | MS.gene67066:CDS | 45.0% | |
| GAGGAAACTCTTGATGCTTC+TGG | + | chr3.4:93191657-93191676 | MS.gene67066:CDS | 45.0% | |
| GCACACTTCCAGACAAACTA+TGG | - | chr3.4:93193137-93193156 | None:intergenic | 45.0% | |
| GCTCACACTCTTGGAAGTAA+AGG | + | chr3.4:93192119-93192138 | MS.gene67066:CDS | 45.0% | |
| GCTGAAGCAGTTGAAGTATG+TGG | + | chr3.4:93191290-93191309 | MS.gene67066:CDS | 45.0% | |
| TACCAGAGAAAACAAGGACC+TGG | - | chr3.4:93191175-93191194 | None:intergenic | 45.0% | |
| TCAACAAGTGCGTGATCTGA+AGG | - | chr3.4:93192366-93192385 | None:intergenic | 45.0% | |
| TCCCTTGAAAATGCATACCC+TGG | + | chr3.4:93193037-93193056 | MS.gene67066:intron | 45.0% | |
| TGGTGAATTCTGGTGTGAAG+TGG | + | chr3.4:93193529-93193548 | MS.gene67066:CDS | 45.0% | |
| TTGTGAAGCAGTCAAGCACT+AGG | + | chr3.4:93192471-93192490 | MS.gene67066:intron | 45.0% | |
| ! | AACCGCGATCTTTTCTCCTA+AGG | + | chr3.4:93191406-93191425 | MS.gene67066:intron | 45.0% |
| ! | CAGGTATACATCTAGCTCAG+GGG | + | chr3.4:93190238-93190257 | MS.gene67066:intron | 45.0% |
| ! | GAAGCATCAAGAGTTTCCTC+GGG | - | chr3.4:93191657-93191676 | None:intergenic | 45.0% |
| ! | GGTGGTATGTCGACTATGAT+CGG | + | chr3.4:93192336-93192355 | MS.gene67066:intron | 45.0% |
| ! | TCTTCATCGGTTGACTTTGC+TGG | - | chr3.4:93190307-93190326 | None:intergenic | 45.0% |
| ! | TGTTTGTTGGGCTTAGCCTT+AGG | + | chr3.4:93193246-93193265 | MS.gene67066:intron | 45.0% |
| ! | TTCAGATCACGCACTTGTTG+AGG | + | chr3.4:93192365-93192384 | MS.gene67066:CDS | 45.0% |
| !! | AAAACGGTACTGGCAGTATG+TGG | - | chr3.4:93190439-93190458 | None:intergenic | 45.0% |
| !! | AGGTTCTTTTGGAGAAGCCA+TGG | + | chr3.4:93192180-93192199 | MS.gene67066:CDS | 45.0% |
| !!! | ATCCAGGTCCTTGTTTTCTC+TGG | + | chr3.4:93191170-93191189 | MS.gene67066:intron | 45.0% |
| !!! | CGTTTGGTTTTCCATGATGC+TGG | + | chr3.4:93190192-93190211 | MS.gene67066:CDS | 45.0% |
| !! | TTAATCTAAATATTATTTAA+AGG | - | chr3.4:93192517-93192536 | None:intergenic | 5.0% |
| !! | TTATTAAGTAAATATATAAA+AGG | + | chr3.4:93192938-93192957 | MS.gene67066:intron | 5.0% |
| ACACTACCCAGCAGATTTGG+AGG | - | chr3.4:93189344-93189363 | None:intergenic | 50.0% | |
| CATGCTTCTTCAGGTGAGTG+AGG | + | chr3.4:93189308-93189327 | MS.gene67066:intron | 50.0% | |
| CCGAGCGAAACTGTGATAGT+AGG | - | chr3.4:93191320-93191339 | None:intergenic | 50.0% | |
| CCTTGTACCTCCAAATCTGC+TGG | + | chr3.4:93189334-93189353 | MS.gene67066:intron | 50.0% | |
| CTCACTCACCTGAAGAAGCA+TGG | - | chr3.4:93189310-93189329 | None:intergenic | 50.0% | |
| CTGATGCGCACTGCACAATA+CGG | - | chr3.4:93189220-93189239 | None:intergenic | 50.0% | |
| GAACCAGAAACTTGCGTCAG+GGG | + | chr3.4:93192857-93192876 | MS.gene67066:intron | 50.0% | |
| GCTCGGCAATTGCATCTGTA+TGG | + | chr3.4:93190670-93190689 | MS.gene67066:intron | 50.0% | |
| GGAACCAGAAACTTGCGTCA+GGG | + | chr3.4:93192856-93192875 | MS.gene67066:intron | 50.0% | |
| GGAAGTTTCCCTTCAGGATC+AGG | - | chr3.4:93191636-93191655 | None:intergenic | 50.0% | |
| GGAATGGGATTGGGTGCTTA+CGG | - | chr3.4:93189519-93189538 | None:intergenic | 50.0% | |
| TCCGCCCAGGATACTAACAA+AGG | - | chr3.4:93191251-93191270 | None:intergenic | 50.0% | |
| TGAGTGAGGGGAAGAAGACA+TGG | - | chr3.4:93189465-93189484 | None:intergenic | 50.0% | |
| TGGAACCAGAAACTTGCGTC+AGG | + | chr3.4:93192855-93192874 | MS.gene67066:intron | 50.0% | |
| TTGACAAAGGGAAAGGCTGC+AGG | + | chr3.4:93190162-93190181 | MS.gene67066:CDS | 50.0% | |
| ! | CCAGCAGATTTGGAGGTACA+AGG | - | chr3.4:93189337-93189356 | None:intergenic | 50.0% |
| ! | CTCACCTGAAGAAGCATGGT+CGG | - | chr3.4:93189306-93189325 | None:intergenic | 50.0% |
| ! | GGATTGGATTAGAGGGAGTG+AGG | + | chr3.4:93190008-93190027 | MS.gene67066:intron | 50.0% |
| ! | TTGGATTAGAGGGAGTGAGG+AGG | + | chr3.4:93190011-93190030 | MS.gene67066:intron | 50.0% |
| ! | TTGTCTGGAGCTCACACTCT+TGG | + | chr3.4:93192110-93192129 | MS.gene67066:CDS | 50.0% |
| !! | ACTTTACCAGAAGGCGTCCA+TGG | - | chr3.4:93192200-93192219 | None:intergenic | 50.0% |
| !! | AGTGTGCTTTGAGACGACAC+AGG | + | chr3.4:93193150-93193169 | MS.gene67066:intron | 50.0% |
| ACTGAGACGTTAGCTGAGCC+TGG | - | chr3.4:93191091-93191110 | None:intergenic | 55.0% | |
| AGGCTCAGCTAACGTCTCAG+TGG | + | chr3.4:93191090-93191109 | MS.gene67066:intron | 55.0% | |
| ATAGGGGGCCTGATCCTGAA+GGG | + | chr3.4:93191625-93191644 | MS.gene67066:intron | 55.0% | |
| ATTGTGCAGTGCGCATCAGG+TGG | + | chr3.4:93189221-93189240 | MS.gene67066:CDS | 55.0% | |
| CGTATTGTGCAGTGCGCATC+AGG | + | chr3.4:93189218-93189237 | MS.gene67066:CDS | 55.0% | |
| TATAGGGGGCCTGATCCTGA+AGG | + | chr3.4:93191624-93191643 | MS.gene67066:intron | 55.0% | |
| TCCTCGGGAAGTTTCCCTTC+AGG | - | chr3.4:93191642-93191661 | None:intergenic | 55.0% | |
| TCCTGAAGGGAAACTTCCCG+AGG | + | chr3.4:93191638-93191657 | MS.gene67066:CDS | 55.0% | |
| TGACCCCTGACGCAAGTTTC+TGG | - | chr3.4:93192863-93192882 | None:intergenic | 55.0% | |
| TGCATACACATGCCGTGCAC+CGG | - | chr3.4:93193381-93193400 | None:intergenic | 55.0% | |
| CACAGCAATAACGTCCGCCC+AGG | - | chr3.4:93191264-93191283 | None:intergenic | 60.0% | |
| CGCTCCGACCATGCTTCTTC+AGG | + | chr3.4:93189299-93189318 | MS.gene67066:CDS | 60.0% | |
| CTGGGCGGACGTTATTGCTG+TGG | + | chr3.4:93191262-93191281 | MS.gene67066:CDS | 60.0% | |
| GAGAAGCCATGGACGCCTTC+TGG | + | chr3.4:93192191-93192210 | MS.gene67066:CDS | 60.0% | |
| GCATACACATGCCGTGCACC+GGG | - | chr3.4:93193380-93193399 | None:intergenic | 60.0% | |
| GCGGACGTTATTGCTGTGGC+TGG | + | chr3.4:93191266-93191285 | MS.gene67066:CDS | 60.0% | |
| GGCTGCAGGTGTGCTTCGTT+TGG | + | chr3.4:93190176-93190195 | MS.gene67066:CDS | 60.0% | |
| GGGATTGGGTGCTTACGGCA+TGG | - | chr3.4:93189514-93189533 | None:intergenic | 60.0% | |
| GGGTGCTTACGGCATGGCGT+TGG | - | chr3.4:93189508-93189527 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 93189197 | 93193563 | 93189197 | ID=MS.gene67066 |
| chr3.4 | mRNA | 93189197 | 93193563 | 93189197 | ID=MS.gene67066.t1;Parent=MS.gene67066 |
| chr3.4 | exon | 93189197 | 93189320 | 93189197 | ID=MS.gene67066.t1.exon1;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93189197 | 93189320 | 93189197 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| chr3.4 | exon | 93189406 | 93189517 | 93189406 | ID=MS.gene67066.t1.exon2;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93189406 | 93189517 | 93189406 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| chr3.4 | exon | 93190113 | 93190240 | 93190113 | ID=MS.gene67066.t1.exon3;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93190113 | 93190240 | 93190113 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| chr3.4 | exon | 93190886 | 93190956 | 93190886 | ID=MS.gene67066.t1.exon4;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93190886 | 93190956 | 93190886 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| chr3.4 | exon | 93191133 | 93191175 | 93191133 | ID=MS.gene67066.t1.exon5;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93191133 | 93191175 | 93191133 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| chr3.4 | exon | 93191258 | 93191354 | 93191258 | ID=MS.gene67066.t1.exon6;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93191258 | 93191354 | 93191258 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| chr3.4 | exon | 93191629 | 93191712 | 93191629 | ID=MS.gene67066.t1.exon7;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93191629 | 93191712 | 93191629 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| chr3.4 | exon | 93192091 | 93192212 | 93192091 | ID=MS.gene67066.t1.exon8;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93192091 | 93192212 | 93192091 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| chr3.4 | exon | 93192337 | 93192403 | 93192337 | ID=MS.gene67066.t1.exon9;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93192337 | 93192403 | 93192337 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| chr3.4 | exon | 93193461 | 93193563 | 93193461 | ID=MS.gene67066.t1.exon10;Parent=MS.gene67066.t1 |
| chr3.4 | CDS | 93193461 | 93193563 | 93193461 | ID=cds.MS.gene67066.t1;Parent=MS.gene67066.t1 |
| Gene Sequence |
| Protein sequence |
