AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene27263

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27263.t1 MTR_1g022970 97.983 347 7 0 1 347 1 347 0.0 710
MS.gene27263.t1 MTR_8g076820 62.662 308 114 1 40 347 24 330 1.13e-139 399
MS.gene27263.t1 MTR_5g021060 62.252 302 113 1 46 347 30 330 2.93e-138 396
MS.gene27263.t1 MTR_4g122640 49.568 347 164 4 1 347 1 336 1.57e-111 328
MS.gene27263.t1 MTR_3g072190 52.649 302 134 2 46 347 26 318 1.81e-109 322
MS.gene27263.t1 MTR_5g014100 52.229 314 145 3 38 347 19 331 2.58e-108 320
MS.gene27263.t1 MTR_4g029170 51.803 305 136 4 45 347 26 321 7.96e-108 318
MS.gene27263.t1 MTR_5g074970 53.268 306 130 4 46 347 30 326 2.29e-107 317
MS.gene27263.t1 MTR_3g466200 52.459 305 133 4 46 347 25 320 2.72e-107 317
MS.gene27263.t1 MTR_3g094650 50.000 304 141 3 46 347 28 322 1.26e-105 312
MS.gene27263.t1 MTR_2g084020 51.325 302 139 2 46 347 25 318 2.30e-104 309
MS.gene27263.t1 MTR_7g072510 47.712 306 151 2 42 347 16 312 2.73e-104 309
MS.gene27263.t1 MTR_4g029180 52.000 300 133 4 50 347 31 321 2.77e-104 309
MS.gene27263.t1 MTR_2g084010 51.325 302 139 2 46 347 25 318 3.41e-104 309
MS.gene27263.t1 MTR_2g084000 50.331 302 142 2 46 347 26 319 3.01e-103 306
MS.gene27263.t1 MTR_2g029820 49.338 302 153 0 46 347 29 330 8.33e-103 306
MS.gene27263.t1 MTR_2g084080 50.000 302 142 2 46 347 25 317 8.63e-103 305
MS.gene27263.t1 MTR_5g083860 49.342 304 143 3 46 347 31 325 2.35e-102 304
MS.gene27263.t1 MTR_2g029830 49.338 302 153 0 46 347 28 329 4.40e-102 305
MS.gene27263.t1 MTR_2g029560 48.013 302 157 0 46 347 24 325 1.40e-101 303
MS.gene27263.t1 MTR_7g093370 47.525 303 158 1 46 347 69 371 1.53e-101 304
MS.gene27263.t1 MTR_2g029750 48.077 312 162 0 36 347 19 330 2.06e-101 303
MS.gene27263.t1 MTR_2g029815 48.344 302 156 0 46 347 29 330 2.37e-101 303
MS.gene27263.t1 MTR_4g029200 50.000 302 142 2 46 347 46 338 4.43e-101 301
MS.gene27263.t1 MTR_5g049280 47.541 305 157 3 46 347 33 337 5.33e-101 301
MS.gene27263.t1 MTR_2g029740 48.397 312 161 0 36 347 19 330 6.37e-101 301
MS.gene27263.t1 MTR_1g054205 47.855 303 157 1 46 347 24 326 1.66e-100 300
MS.gene27263.t1 MTR_2g029860 48.344 302 156 0 46 347 29 330 3.15e-100 300
MS.gene27263.t1 MTR_2g084110 49.338 302 144 2 46 347 25 317 3.51e-100 298
MS.gene27263.t1 MTR_5g074760 48.525 305 146 4 46 347 25 321 4.65e-100 298
MS.gene27263.t1 MTR_3g094670 49.342 304 143 3 46 347 28 322 7.59e-100 298
MS.gene27263.t1 MTR_2g040000 49.191 309 152 2 42 347 25 331 7.92e-100 298
MS.gene27263.t1 MTR_7g072480 50.000 310 138 4 42 347 20 316 1.31e-99 297
MS.gene27263.t1 MTR_5g074860 49.013 304 144 4 46 346 29 324 1.41e-99 297
MS.gene27263.t1 MTR_4g029190 49.032 310 146 4 41 347 40 340 1.67e-99 298
MS.gene27263.t1 MTR_2g029730 47.682 302 158 0 46 347 25 326 1.69e-99 298
MS.gene27263.t1 MTR_5g074740 48.197 305 147 4 46 347 25 321 1.96e-99 297
MS.gene27263.t1 MTR_3g094630 49.671 304 142 3 46 347 28 322 1.30e-98 295
MS.gene27263.t1 MTR_4g125940 48.684 304 152 2 46 347 28 329 1.94e-98 295
MS.gene27263.t1 MTR_2g029910 48.355 304 154 2 46 347 30 332 2.09e-98 295
MS.gene27263.t1 MTR_2g029850 48.013 302 157 0 46 347 29 330 2.83e-98 295
MS.gene27263.t1 MTR_5g074710 48.525 305 146 4 46 347 25 321 5.45e-98 293
MS.gene27263.t1 MTR_2g029800 47.020 302 160 0 46 347 29 330 6.33e-98 294
MS.gene27263.t1 MTR_2g028980 49.007 302 154 0 46 347 29 330 8.66e-98 294
MS.gene27263.t1 MTR_5g017850 51.171 299 142 3 50 347 31 326 8.70e-98 293
MS.gene27263.t1 MTR_2g084090 48.845 303 145 3 46 347 25 318 1.52e-97 292
MS.gene27263.t1 MTR_7g026990 48.322 298 144 3 50 347 35 322 6.17e-96 288
MS.gene27263.t1 MTR_5g017860 50.167 299 145 3 50 347 31 326 4.97e-95 286
MS.gene27263.t1 MTR_4g030890 47.097 310 159 3 38 347 92 396 9.54e-95 288
MS.gene27263.t1 MTR_1g115900 47.039 304 150 4 46 347 27 321 9.31e-94 283
MS.gene27263.t1 MTR_4g083710 46.557 305 153 3 46 347 27 324 1.10e-93 282
MS.gene27263.t1 MTR_4g031140 46.557 305 158 3 43 347 25 324 1.22e-93 283
MS.gene27263.t1 MTR_3g466180 48.344 302 147 2 46 347 31 323 4.51e-93 281
MS.gene27263.t1 MTR_4g125940 50.000 276 134 2 74 347 1 274 7.75e-92 276
MS.gene27263.t1 MTR_3g072190 51.351 259 117 2 89 347 2 251 1.95e-91 274
MS.gene27263.t1 MTR_3g467600 45.246 305 157 3 46 347 27 324 3.36e-90 273
MS.gene27263.t1 MTR_4g074995 45.246 305 144 4 46 347 24 308 5.06e-88 267
MS.gene27263.t1 MTR_4g074990 44.262 305 144 3 46 347 24 305 1.96e-85 260
MS.gene27263.t1 MTR_1g101830 45.364 302 159 5 46 347 27 322 5.18e-83 255
MS.gene27263.t1 MTR_2g029830 47.860 257 134 0 91 347 5 261 7.10e-82 251
MS.gene27263.t1 MTR_5g022870 44.444 306 156 7 45 347 22 316 2.50e-81 250
MS.gene27263.t1 MTR_3g092990 43.813 299 165 3 50 347 30 326 2.62e-81 251
MS.gene27263.t1 MTR_0155s0040 43.564 303 158 7 45 347 26 315 2.82e-81 250
MS.gene27263.t1 MTR_2g088770 45.333 300 158 5 50 347 30 325 3.26e-81 250
MS.gene27263.t1 MTR_4g133800 44.295 298 155 6 51 347 46 333 6.93e-80 247
MS.gene27263.t1 MTR_1g077000 42.053 302 162 6 46 347 39 327 1.65e-79 246
MS.gene27263.t1 MTR_8g075100 42.484 306 162 7 45 347 25 319 5.12e-79 244
MS.gene27263.t1 MTR_1g086320 42.357 314 175 3 38 347 22 333 1.13e-78 244
MS.gene27263.t1 MTR_2g008710 44.040 302 158 5 50 347 31 325 4.55e-78 242
MS.gene27263.t1 MTR_4g046713 42.244 303 171 3 46 347 27 326 2.23e-77 241
MS.gene27263.t1 MTR_1g086490 40.810 321 177 4 38 347 22 340 1.84e-76 239
MS.gene27263.t1 MTR_1g038680 42.053 302 169 5 50 347 33 332 2.37e-76 238
MS.gene27263.t1 MTR_4g074980 42.715 302 141 5 46 347 25 294 2.83e-76 236
MS.gene27263.t1 MTR_5g074860 41.776 304 127 4 46 346 29 285 1.30e-75 234
MS.gene27263.t1 MTR_1g025980 42.484 306 167 6 42 346 20 317 3.56e-75 234
MS.gene27263.t1 MTR_7g107520 42.395 309 170 5 41 347 18 320 6.22e-75 234
MS.gene27263.t1 MTR_7g086820 41.946 298 164 6 50 347 24 312 6.93e-74 231
MS.gene27263.t1 MTR_4g074980 48.511 235 112 2 46 277 25 253 8.90e-74 229
MS.gene27263.t1 MTR_6g027440 42.667 300 160 6 50 347 25 314 1.53e-73 230
MS.gene27263.t1 MTR_2g437770 42.574 303 162 8 46 347 50 341 1.84e-73 231
MS.gene27263.t1 MTR_6g043280 40.741 324 172 7 27 347 26 332 1.94e-72 228
MS.gene27263.t1 MTR_4g132490 39.617 313 177 5 42 347 20 327 5.03e-71 224
MS.gene27263.t1 MTR_7g086870 41.275 298 163 6 50 347 26 311 1.77e-70 222
MS.gene27263.t1 MTR_4g114210 42.405 316 170 5 37 347 12 320 2.27e-70 222
MS.gene27263.t1 MTR_7g029030 38.511 309 170 4 46 347 25 320 2.05e-69 220
MS.gene27263.t1 MTR_4g087965 40.594 303 173 5 46 343 42 342 2.12e-69 221
MS.gene27263.t1 MTR_3g092990 41.472 299 161 4 50 347 30 315 2.80e-69 219
MS.gene27263.t1 MTR_2g067440 39.577 331 166 6 46 346 60 386 1.18e-67 218
MS.gene27263.t1 MTR_2g078610 40.240 333 164 7 46 346 76 405 6.30e-67 216
MS.gene27263.t1 MTR_6g043240 40.984 305 164 7 45 347 41 331 2.40e-66 213
MS.gene27263.t1 MTR_2g077990 39.940 333 165 7 46 346 76 405 4.13e-65 211
MS.gene27263.t1 MTR_6g043460 40.000 300 169 5 45 343 35 324 1.34e-63 206
MS.gene27263.t1 MTR_5g016010 34.393 346 203 5 1 343 1 325 5.60e-63 204
MS.gene27263.t1 MTR_1g009750 36.721 305 187 4 46 347 27 328 7.25e-63 203
MS.gene27263.t1 MTR_8g062780 39.016 305 180 5 46 347 23 324 1.84e-62 202
MS.gene27263.t1 MTR_2g099175 36.156 307 184 4 46 347 36 335 6.75e-62 201
MS.gene27263.t1 MTR_4g095450 37.542 301 178 4 46 343 27 320 6.30e-61 198
MS.gene27263.t1 MTR_2g078280 39.688 320 158 7 46 333 76 392 1.17e-60 199
MS.gene27263.t1 MTR_3g105790 39.145 304 177 4 46 347 25 322 1.39e-60 197
MS.gene27263.t1 MTR_1g066380 38.689 305 176 4 46 347 27 323 7.60e-60 195
MS.gene27263.t1 MTR_1g090760 37.049 305 187 4 46 347 28 330 1.03e-59 195
MS.gene27263.t1 MTR_2g008160 40.836 311 156 8 50 347 28 323 1.24e-59 195
MS.gene27263.t1 MTR_4g127670 37.582 306 181 5 46 347 24 323 1.37e-59 195
MS.gene27263.t1 MTR_0147s0010 37.654 324 166 5 43 346 74 381 5.70e-59 195
MS.gene27263.t1 MTR_1g066710 37.705 305 179 4 46 347 27 323 1.34e-58 192
MS.gene27263.t1 MTR_5g074700 42.672 232 108 5 119 347 5 214 4.67e-57 184
MS.gene27263.t1 MTR_5g033470 37.500 304 181 7 50 347 77 377 6.86e-57 189
MS.gene27263.t1 MTR_1g066640 38.538 301 174 4 50 347 31 323 7.59e-57 187
MS.gene27263.t1 MTR_1g066680 38.436 307 173 6 46 347 27 322 9.05e-57 187
MS.gene27263.t1 MTR_2g067450 39.216 306 174 7 46 346 11 309 3.97e-56 185
MS.gene27263.t1 MTR_2g008730 36.755 302 156 5 50 347 31 301 2.90e-55 183
MS.gene27263.t1 MTR_0286s0010 34.967 306 190 6 46 347 34 334 3.11e-55 184
MS.gene27263.t1 MTR_6g008075 34.967 306 190 6 46 347 34 334 3.11e-55 184
MS.gene27263.t1 MTR_3g072210 47.668 193 90 4 157 347 55 238 5.15e-53 175
MS.gene27263.t1 MTR_4g132110 35.621 306 178 5 45 343 31 324 4.39e-52 176
MS.gene27263.t1 MTR_1g009750 33.333 303 183 4 46 347 27 311 4.63e-52 175
MS.gene27263.t1 MTR_1g066380 39.464 261 147 4 90 347 3 255 3.76e-50 168
MS.gene27263.t1 MTR_4g132110 35.048 311 178 6 45 343 31 329 9.91e-50 169
MS.gene27263.t1 MTR_2g008160 36.774 310 135 7 50 347 28 288 3.40e-48 164
MS.gene27263.t1 MTR_3g105790 39.662 237 139 3 113 347 12 246 2.85e-44 152
MS.gene27263.t1 MTR_2g008160 47.191 178 86 4 50 225 28 199 6.39e-43 148
MS.gene27263.t1 MTR_7g072490 36.948 249 94 3 92 340 2 187 8.23e-43 147
MS.gene27263.t1 MTR_2g029880 41.146 192 99 2 158 347 9 188 3.45e-41 143
MS.gene27263.t1 MTR_3g072260 58.716 109 45 0 46 154 26 134 4.86e-39 135
MS.gene27263.t1 MTR_3g462850 46.099 141 73 3 210 347 9 149 1.02e-34 124
MS.gene27263.t1 MTR_2g077980 32.609 276 146 6 108 346 11 283 8.65e-30 115
MS.gene27263.t1 MTR_2g078560 33.628 226 117 4 152 346 96 319 7.04e-29 114
MS.gene27263.t1 MTR_7g086790 35.979 189 99 5 93 281 17 183 2.03e-25 101
MS.gene27263.t1 MTR_1g089005 42.017 119 62 2 46 158 15 132 3.67e-24 97.1
MS.gene27263.t1 MTR_6g048160 64.789 71 21 2 85 155 22 88 1.27e-22 90.9
MS.gene27263.t1 MTR_4g114220 46.847 111 41 4 72 182 29 121 1.19e-19 84.3
MS.gene27263.t1 MTR_5g074770 44.086 93 51 1 254 346 17 108 3.68e-19 82.0
MS.gene27263.t1 MTR_3g107060 27.915 283 128 9 61 328 91 312 5.72e-18 84.0
MS.gene27263.t1 MTR_4g031040 32.759 174 73 3 105 278 1 130 1.04e-17 79.0
MS.gene27263.t1 MTR_7g086810 36.290 124 52 2 42 164 1 98 1.06e-17 81.6
MS.gene27263.t1 MTR_2g029930 43.333 90 26 2 46 124 19 94 5.96e-17 75.9
MS.gene27263.t1 MTR_5g058120 33.129 163 96 4 181 343 6 155 1.69e-16 78.6
MS.gene27263.t1 MTR_1g098320 47.368 76 38 1 268 343 47 120 9.29e-16 73.9
MS.gene27263.t1 MTR_7g107500 43.023 86 46 2 262 347 15 97 7.43e-15 70.1
MS.gene27263.t1 MTR_7g086785 44.578 83 45 1 89 171 1 82 9.25e-15 70.9
MS.gene27263.t1 MTR_4g012865 47.887 71 37 0 43 113 74 144 1.69e-14 70.5
MS.gene27263.t1 MTR_0147s0040 41.333 75 42 1 272 346 10 82 2.29e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene27263.t1 AT1G44970 70.940 351 93 4 1 347 1 346 5.28e-177 494
MS.gene27263.t1 AT4G36430 61.258 302 116 1 46 347 30 330 7.98e-140 400
MS.gene27263.t1 AT2G18150 56.069 346 137 4 2 347 6 336 8.83e-140 400
MS.gene27263.t1 AT5G66390 61.589 302 115 1 46 347 33 333 2.21e-138 396
MS.gene27263.t1 AT2G18140 53.731 335 146 2 13 347 10 335 7.06e-130 375
MS.gene27263.t1 AT3G50990 57.756 303 127 1 45 347 40 341 4.97e-126 365
MS.gene27263.t1 AT5G06720 50.000 302 151 0 46 347 32 333 1.06e-109 323
MS.gene27263.t1 AT2G35380 53.871 310 123 4 50 347 34 335 5.03e-106 314
MS.gene27263.t1 AT2G38390 50.165 303 150 1 46 347 31 333 8.82e-104 309
MS.gene27263.t1 AT5G06730 47.020 302 160 0 46 347 33 334 3.69e-103 308
MS.gene27263.t1 AT4G16270 50.311 322 147 7 32 347 34 348 5.44e-102 304
MS.gene27263.t1 AT1G49570 47.953 342 172 4 6 343 7 346 7.30e-101 301
MS.gene27263.t1 AT5G19890 49.838 309 147 4 41 347 25 327 2.46e-100 299
MS.gene27263.t1 AT5G05340 47.039 304 150 3 46 347 30 324 2.80e-100 299
MS.gene27263.t1 AT2G38380 49.505 303 152 1 46 347 31 333 6.22e-100 299
MS.gene27263.t1 AT2G22420 48.344 302 151 3 46 347 23 319 3.76e-99 296
MS.gene27263.t1 AT4G08780 48.026 304 156 2 46 347 24 327 4.45e-99 297
MS.gene27263.t1 AT5G58400 47.869 305 147 4 46 347 30 325 6.49e-99 296
MS.gene27263.t1 AT4G08770 48.026 304 156 2 46 347 24 327 8.92e-99 296
MS.gene27263.t1 AT5G58390 50.820 305 138 4 46 347 21 316 1.76e-95 286
MS.gene27263.t1 AT3G32980 46.711 304 160 2 46 347 31 334 2.93e-95 287
MS.gene27263.t1 AT3G49110 47.368 304 158 2 46 347 33 336 1.23e-94 286
MS.gene27263.t1 AT1G68850 44.089 313 171 3 39 347 23 335 3.77e-94 284
MS.gene27263.t1 AT1G14550 48.515 303 148 3 46 347 26 321 1.17e-93 282
MS.gene27263.t1 AT3G49120 46.711 304 160 2 46 347 32 335 5.60e-93 281
MS.gene27263.t1 AT1G14540 45.695 302 157 2 46 347 21 315 1.13e-90 274
MS.gene27263.t1 AT3G03670 44.482 299 163 2 49 347 26 321 7.17e-87 265
MS.gene27263.t1 AT5G19880 44.262 305 167 2 46 347 25 329 7.39e-86 262
MS.gene27263.t1 AT5G51890 44.918 305 159 6 45 347 25 322 1.87e-82 253
MS.gene27263.t1 AT5G64120 40.346 347 188 7 1 347 1 328 2.17e-82 253
MS.gene27263.t1 AT5G42180 44.884 303 158 6 45 346 22 316 1.68e-81 251
MS.gene27263.t1 AT5G17820 42.282 298 160 5 50 347 28 313 2.28e-81 250
MS.gene27263.t1 AT1G05260 43.894 303 166 4 46 347 26 325 9.34e-81 249
MS.gene27263.t1 AT1G71695 44.444 306 158 6 45 347 43 339 3.44e-80 249
MS.gene27263.t1 AT5G17820 42.282 298 160 5 50 347 81 366 4.71e-80 249
MS.gene27263.t1 AT2G35380 51.765 255 103 4 105 347 1 247 5.73e-80 244
MS.gene27263.t1 AT4G33420 43.894 303 157 6 45 347 36 325 1.78e-78 243
MS.gene27263.t1 AT4G33420 43.894 303 157 6 45 347 83 372 7.88e-78 243
MS.gene27263.t1 AT4G11290 43.333 300 166 3 50 347 29 326 2.16e-77 241
MS.gene27263.t1 AT3G21770 42.258 310 171 5 37 343 20 324 4.43e-77 240
MS.gene27263.t1 AT5G15180 42.434 304 169 5 45 347 31 329 5.86e-75 234
MS.gene27263.t1 AT2G41480 42.904 303 161 5 50 347 33 328 2.23e-72 228
MS.gene27263.t1 AT1G05240 41.196 301 169 5 46 343 26 321 2.61e-72 228
MS.gene27263.t1 AT1G05250 41.196 301 169 5 46 343 26 321 2.61e-72 228
MS.gene27263.t1 AT5G39580 42.475 299 163 6 50 347 29 319 8.88e-72 226
MS.gene27263.t1 AT4G26010 41.472 299 159 6 50 347 26 309 3.61e-71 224
MS.gene27263.t1 AT4G26010 41.472 299 159 6 50 347 54 337 5.15e-71 224
MS.gene27263.t1 AT3G01190 40.656 305 175 5 43 347 23 321 2.91e-70 222
MS.gene27263.t1 AT2G18980 40.000 305 174 4 46 347 25 323 2.08e-69 220
MS.gene27263.t1 AT4G25980 40.594 303 169 5 50 347 30 326 5.10e-69 219
MS.gene27263.t1 AT2G39040 42.395 309 167 6 46 347 46 350 9.97e-69 219
MS.gene27263.t1 AT4G30170 39.032 310 178 5 42 347 23 325 2.19e-68 218
MS.gene27263.t1 AT5G64110 42.193 301 163 5 50 347 38 330 4.89e-68 217
MS.gene27263.t1 AT5G64100 40.864 301 165 7 50 347 41 331 6.51e-68 216
MS.gene27263.t1 AT4G33870 37.048 332 171 4 50 346 72 400 1.51e-67 218
MS.gene27263.t1 AT1G30870 42.295 305 163 7 46 347 51 345 3.09e-67 215
MS.gene27263.t1 AT4G37530 38.158 304 183 3 43 343 24 325 4.40e-65 209
MS.gene27263.t1 AT4G31760 39.739 307 177 3 43 347 26 326 6.28e-65 209
MS.gene27263.t1 AT4G37520 37.209 301 184 3 46 343 27 325 1.27e-63 205
MS.gene27263.t1 AT3G49960 36.721 305 188 3 46 347 27 329 3.10e-63 204
MS.gene27263.t1 AT5G40150 40.132 304 173 5 46 347 32 328 8.37e-63 203
MS.gene27263.t1 AT5G47000 38.961 308 172 7 46 347 33 330 1.32e-62 203
MS.gene27263.t1 AT1G77100 38.486 317 175 7 36 347 18 319 3.94e-62 201
MS.gene27263.t1 AT4G37520 36.877 301 182 4 46 343 27 322 7.78e-62 201
MS.gene27263.t1 AT2G34060 37.829 304 182 5 46 344 42 343 1.71e-61 200
MS.gene27263.t1 AT5G67400 37.209 301 184 3 46 343 27 325 2.91e-61 199
MS.gene27263.t1 AT3G28200 37.171 304 181 4 46 347 21 316 2.63e-59 194
MS.gene27263.t1 AT2G24800 39.344 305 176 5 46 347 31 329 3.18e-59 194
MS.gene27263.t1 AT4G17690 37.705 305 179 5 46 347 26 322 4.04e-59 194
MS.gene27263.t1 AT1G24110 37.908 306 181 7 46 347 22 322 4.08e-59 194
MS.gene27263.t1 AT1G34510 37.793 299 170 6 50 347 26 309 1.58e-58 191
MS.gene27263.t1 AT5G14130 35.644 303 190 4 46 347 32 330 2.45e-58 192
MS.gene27263.t1 AT5G14130 35.644 303 190 4 46 347 73 371 6.72e-58 192
MS.gene27263.t1 AT5G22410 38.333 300 171 8 50 344 32 322 7.73e-58 191
MS.gene27263.t1 AT3G17070 36.943 314 176 7 45 347 37 339 2.95e-57 189
MS.gene27263.t1 AT5G24070 33.846 325 194 6 36 347 19 335 3.93e-56 186
MS.gene27263.t1 AT2G43480 35.275 309 185 6 46 347 35 335 6.13e-56 186
MS.gene27263.t1 AT2G37130 38.079 302 175 5 50 347 3 296 6.92e-56 184
MS.gene27263.t1 AT2G37130 38.312 308 174 6 46 347 30 327 9.10e-56 185
MS.gene27263.t1 AT4G37530 38.281 256 155 2 43 295 24 279 2.62e-55 182
MS.gene27263.t1 AT4G21960 37.419 310 175 5 45 347 30 327 3.37e-55 184
MS.gene27263.t1 AT4G25980 47.561 164 82 3 50 213 75 234 1.32e-43 152
MS.gene27263.t1 AT3G17070 35.424 271 152 8 88 347 18 276 6.67e-43 150
MS.gene27263.t1 AT5G39580 45.455 165 85 3 50 214 29 188 2.76e-38 137
MS.gene27263.t1 AT2G24800 39.604 202 107 3 46 247 31 217 2.86e-36 132
MS.gene27263.t1 AT4G32320 29.225 284 125 9 62 328 97 321 5.37e-20 89.7
MS.gene27263.t1 AT3G42570 36.082 97 61 1 118 213 53 149 9.61e-14 68.6
MS.gene27263.t1 AT4G08390 26.394 269 144 10 80 329 126 359 6.12e-12 66.6
MS.gene27263.t1 AT4G08390 26.394 269 144 10 80 329 127 360 6.26e-12 66.6
MS.gene27263.t1 AT4G08390 26.394 269 144 10 80 329 127 360 6.26e-12 66.6
MS.gene27263.t1 AT4G08390 26.394 269 144 10 80 329 127 360 6.26e-12 66.6

Find 76 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGTTGGTTGTTTCCATTT+TGG 0.258817 1.1:-1590723 None:intergenic
CCTAAGTAAGAGTTTGTAAT+AGG 0.274011 1.1:-1590860 None:intergenic
ACCACTAGAGGAATGTCTTT+TGG 0.298662 1.1:+1589360 MS.gene27263:CDS
AGGTATTATCAAACATTCTT+GGG 0.320019 1.1:-1590840 None:intergenic
CCTATTACAAACTCTTACTT+AGG 0.320265 1.1:+1590860 MS.gene27263:CDS
CAAAGACTATACAACCAAAA+TGG 0.350393 1.1:+1590709 MS.gene27263:CDS
ATTATTTCTCCCTTGGACTT+TGG 0.353163 1.1:+1590814 MS.gene27263:CDS
CCACCAAATGCCACTGTTGA+AGG 0.354212 1.1:+1590463 MS.gene27263:CDS
TTTGAGTCTCTCCTTCCTAA+TGG 0.355118 1.1:-1590403 None:intergenic
TAGGTATTATCAAACATTCT+TGG 0.367240 1.1:-1590841 None:intergenic
GCCTTGTCTATGATCAAGTT+GGG 0.368870 1.1:+1590994 MS.gene27263:CDS
ATATTGTTGCGCTTGCTGCT+AGG 0.380595 1.1:+1590073 MS.gene27263:CDS
TTTGGCTGGGGTGGTCATCA+TGG 0.381646 1.1:+1589333 MS.gene27263:CDS
AACAGAGTGGAGGACCTAAC+TGG 0.382219 1.1:+1590374 MS.gene27263:intron
CCTTCAACAGTGGCATTTGG+TGG 0.391076 1.1:-1590463 None:intergenic
GTAGACCTTGTTGCCCTCTC+AGG 0.409416 1.1:+1590523 MS.gene27263:CDS
AGGCCTTCAACAGTGGCATT+TGG 0.409951 1.1:-1590466 None:intergenic
TATTGTTGCGCTTGCTGCTA+GGG 0.418982 1.1:+1590074 MS.gene27263:CDS
AAACTCTTACTTAGGGGAAA+AGG 0.433563 1.1:+1590868 MS.gene27263:CDS
CTATTACAAACTCTTACTTA+GGG 0.433600 1.1:+1590861 MS.gene27263:CDS
TGACAACATTATTTCTCCCT+TGG 0.436794 1.1:+1590807 MS.gene27263:CDS
ATGTTGTCACCACCTGATCT+TGG 0.448426 1.1:-1590793 None:intergenic
TGATGAAATCAAATCTAAGT+TGG 0.449163 1.1:+1590017 MS.gene27263:CDS
AAATCAATGTGCCCAAGATC+AGG 0.449302 1.1:+1590781 MS.gene27263:CDS
GGGAACCTTCGTCCTCTCAC+TGG 0.462709 1.1:+1591015 MS.gene27263:CDS
CCTAATGGTAGCTCCCAGTT+AGG 0.468206 1.1:-1590388 None:intergenic
TGCCTTGTCTATGATCAAGT+TGG 0.474042 1.1:+1590993 MS.gene27263:CDS
AATGTAGGTGCACATACAAT+TGG 0.478313 1.1:+1590661 MS.gene27263:intron
TGTTGTCACCACCTGATCTT+GGG 0.480354 1.1:-1590792 None:intergenic
TTTCTAGATTCGAATCTGGT+TGG 0.488001 1.1:-1590738 None:intergenic
CTTCAACAGTGGCATTTGGT+GGG 0.489391 1.1:-1590462 None:intergenic
TTCAACAGTGGCATTTGGTG+GGG 0.490695 1.1:-1590461 None:intergenic
CCTAACTGGGAGCTACCATT+AGG 0.493079 1.1:+1590388 MS.gene27263:CDS
TGACATTGTCATGTCAGTCT+TGG 0.493447 1.1:+1589425 MS.gene27263:CDS
TCAACAGTGGCATTTGGTGG+GGG 0.500128 1.1:-1590460 None:intergenic
TCAGATGAAGTGCTTCTCAC+AGG 0.521489 1.1:+1590901 MS.gene27263:CDS
TGCAACAAGAAGAATGACTT+TGG 0.522544 1.1:-1589259 None:intergenic
TGACAATGTCATTAGCTTGA+GGG 0.524979 1.1:-1589413 None:intergenic
GCTTCTCACAGGGAATGTTA+AGG 0.529664 1.1:+1590912 MS.gene27263:CDS
TTTGAAAGTTCCACCTGAGA+GGG 0.537314 1.1:-1590536 None:intergenic
CATGAAAACTGATAGAATTG+AGG 0.540572 1.1:-1589390 None:intergenic
TGTTAAGAGGCCTTCAACAG+TGG 0.542269 1.1:-1590473 None:intergenic
CCAAAGTGAAAATCATGGAC+AGG 0.542594 1.1:-1589315 None:intergenic
CCCAGCCAAAGTGAAAATCA+TGG 0.562562 1.1:-1589320 None:intergenic
GGCTGGGGTGGTCATCATGG+TGG 0.563986 1.1:+1589336 MS.gene27263:CDS
TGTTAAGGAGACTCGTGACT+TGG 0.564179 1.1:+1590927 MS.gene27263:CDS
CTTGGAGAAGGCCATTGCTA+AGG 0.567799 1.1:+1589443 MS.gene27263:CDS
AATCATGGACAGGATGAGCA+TGG 0.575254 1.1:-1589305 None:intergenic
AATCACTTCAAAACCTCGAA+CGG 0.577972 1.1:-1589995 None:intergenic
TCCAAAAGACATTCCTCTAG+TGG 0.581773 1.1:-1589361 None:intergenic
TCTTGGGGAACCAAAGTCCA+AGG 0.581851 1.1:-1590824 None:intergenic
ACAGAGTGGAGGACCTAACT+GGG 0.585401 1.1:+1590375 MS.gene27263:intron
ATTGTTGCGCTTGCTGCTAG+GGG 0.587923 1.1:+1590075 MS.gene27263:CDS
CCTTGTCTATGATCAAGTTG+GGG 0.590007 1.1:+1590995 MS.gene27263:CDS
CAGATGAAGTGCTTCTCACA+GGG 0.590201 1.1:+1590902 MS.gene27263:CDS
ATGACAATGTCATTAGCTTG+AGG 0.594591 1.1:-1589414 None:intergenic
CAACAAGGTCTACTTCATCA+AGG 0.594873 1.1:-1590513 None:intergenic
GGTATTATCAAACATTCTTG+GGG 0.598190 1.1:-1590839 None:intergenic
ATCATGGACAGGATGAGCAT+GGG 0.599454 1.1:-1589304 None:intergenic
CATCATGGTGGAACCACTAG+AGG 0.601048 1.1:+1589348 MS.gene27263:CDS
CATTGCTAAGGATATCAGAA+TGG 0.613764 1.1:+1589455 MS.gene27263:CDS
CCCCAACTTGATCATAGACA+AGG 0.616517 1.1:-1590995 None:intergenic
TGTCATGTCAGTCTTGGAGA+AGG 0.621040 1.1:+1589431 MS.gene27263:CDS
TATTACAAACTCTTACTTAG+GGG 0.623907 1.1:+1590862 MS.gene27263:CDS
ATTTGAAAGTTCCACCTGAG+AGG 0.625792 1.1:-1590537 None:intergenic
ACTGGGAGCTACCATTAGGA+AGG 0.633174 1.1:+1590392 MS.gene27263:CDS
TTCCACCTGAGAGGGCAACA+AGG 0.641016 1.1:-1590528 None:intergenic
CATTCTGATATCCTTAGCAA+TGG 0.641247 1.1:-1589454 None:intergenic
TCAATGTGCCCAAGATCAGG+TGG 0.661889 1.1:+1590784 MS.gene27263:CDS
TTACCTGCACAAAACAGTCG+TGG 0.663163 1.1:-1589503 None:intergenic
CTTGGGGAACCAAAGTCCAA+GGG 0.684174 1.1:-1590823 None:intergenic
AATGACTTTGGTGAAAGACA+TGG 0.695046 1.1:-1589247 None:intergenic
TCGCCATTAAAACCAGTGAG+AGG 0.697253 1.1:-1591027 None:intergenic
TAAAACCAGTGAGAGGACGA+AGG 0.705812 1.1:-1591020 None:intergenic
AGGTGCACATACAATTGGTG+TGG 0.734240 1.1:+1590666 MS.gene27263:intron
TCTGCACATGAGACTGTACG+AGG 0.748153 1.1:-1590051 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAGATTCATTTCATA+AGG + chr1.1:1589740-1589759 MS.gene27263:intron 15.0%
!! ACCATAGTCTATTAAAAAAT+TGG - chr1.1:1590226-1590245 None:intergenic 20.0%
!! TGTTTCTTTCTGTATATATA+AGG + chr1.1:1590294-1590313 MS.gene27263:intron 20.0%
!! TTGCATATGTTATATACTTA+GGG + chr1.1:1590162-1590181 MS.gene27263:intron 20.0%
!! TTTGCATATGTTATATACTT+AGG + chr1.1:1590161-1590180 MS.gene27263:intron 20.0%
!!! ACCAATTTTTTAATAGACTA+TGG + chr1.1:1590222-1590241 MS.gene27263:intron 20.0%
!!! CTAGAAAAAACATTTTACTT+TGG + chr1.1:1590754-1590773 MS.gene27263:CDS 20.0%
!!! TTCATTTTACTTTTAACACA+GGG + chr1.1:1589898-1589917 MS.gene27263:intron 20.0%
! AGGTATTATCAAACATTCTT+GGG - chr1.1:1590843-1590862 None:intergenic 25.0%
! CTATTACAAACTCTTACTTA+GGG + chr1.1:1590861-1590880 MS.gene27263:CDS 25.0%
! TAGGTATTATCAAACATTCT+TGG - chr1.1:1590844-1590863 None:intergenic 25.0%
! TATGCAAAGTAGATAAAAGT+TGG - chr1.1:1590149-1590168 None:intergenic 25.0%
! TATTACAAACTCTTACTTAG+GGG + chr1.1:1590862-1590881 MS.gene27263:CDS 25.0%
! TGATGAAATCAAATCTAAGT+TGG + chr1.1:1590017-1590036 MS.gene27263:CDS 25.0%
! TGCATATGTTATATACTTAG+GGG + chr1.1:1590163-1590182 MS.gene27263:intron 25.0%
!! CAAATTAAGAAAGTGTATTC+AGG - chr1.1:1589700-1589719 None:intergenic 25.0%
!! TGCATTTGTTAAATTTGCTT+TGG + chr1.1:1589834-1589853 MS.gene27263:intron 25.0%
!! TTAAGTCTTTTCATTTGTAC+TGG + chr1.1:1589587-1589606 MS.gene27263:intron 25.0%
!!! AATATTCTTTTGAAACAGAG+TGG + chr1.1:1590361-1590380 MS.gene27263:intron 25.0%
!!! CTTCATTTTACTTTTAACAC+AGG + chr1.1:1589897-1589916 MS.gene27263:intron 25.0%
!!! TTTTTTCTCTCAAAAGTTGT+TGG - chr1.1:1589723-1589742 None:intergenic 25.0%
ACACTTGTCAGTGAAAAAAA+TGG + chr1.1:1589955-1589974 MS.gene27263:CDS 30.0%
CAAAGACTATACAACCAAAA+TGG + chr1.1:1590709-1590728 MS.gene27263:CDS 30.0%
CATGAAAACTGATAGAATTG+AGG - chr1.1:1589393-1589412 None:intergenic 30.0%
CCTAAGTAAGAGTTTGTAAT+AGG - chr1.1:1590863-1590882 None:intergenic 30.0%
CCTATTACAAACTCTTACTT+AGG + chr1.1:1590860-1590879 MS.gene27263:CDS 30.0%
GGTATTATCAAACATTCTTG+GGG - chr1.1:1590842-1590861 None:intergenic 30.0%
!!! ATTTTTTTCACTGACAAGTG+TGG - chr1.1:1589956-1589975 None:intergenic 30.0%
!!! GTTTTTTCTAGATTCGAATC+TGG - chr1.1:1590745-1590764 None:intergenic 30.0%
!!! GTTTTTTCTTACAAGAACAG+TGG - chr1.1:1590103-1590122 None:intergenic 30.0%
!!! TTAACATTTTTCAAGCGTCA+AGG + chr1.1:1590490-1590509 MS.gene27263:CDS 30.0%
AAACTCTTACTTAGGGGAAA+AGG + chr1.1:1590868-1590887 MS.gene27263:CDS 35.0%
AATCACTTCAAAACCTCGAA+CGG - chr1.1:1589998-1590017 None:intergenic 35.0%
AATGTAGGTGCACATACAAT+TGG + chr1.1:1590661-1590680 MS.gene27263:intron 35.0%
ACTCAAAAACAGCAAGTCTA+AGG + chr1.1:1590419-1590438 MS.gene27263:CDS 35.0%
AGAAAGAAACACACACATCT+AGG - chr1.1:1590285-1590304 None:intergenic 35.0%
CATTCTGATATCCTTAGCAA+TGG - chr1.1:1589457-1589476 None:intergenic 35.0%
CATTGCTAAGGATATCAGAA+TGG + chr1.1:1589455-1589474 MS.gene27263:CDS 35.0%
CTCAAAAACAGCAAGTCTAA+GGG + chr1.1:1590420-1590439 MS.gene27263:CDS 35.0%
CTTGTCAGTGAAAAAAATGG+TGG + chr1.1:1589958-1589977 MS.gene27263:CDS 35.0%
GACGCTTGAAAAATGTTAAG+AGG - chr1.1:1590489-1590508 None:intergenic 35.0%
TCAAAAACAGCAAGTCTAAG+GGG + chr1.1:1590421-1590440 MS.gene27263:CDS 35.0%
TGCAACAAGAAGAATGACTT+TGG - chr1.1:1589262-1589281 None:intergenic 35.0%
TTTCTAGATTCGAATCTGGT+TGG - chr1.1:1590741-1590760 None:intergenic 35.0%
! ATGACAATGTCATTAGCTTG+AGG - chr1.1:1589417-1589436 None:intergenic 35.0%
! ATTATTTCTCCCTTGGACTT+TGG + chr1.1:1590814-1590833 MS.gene27263:CDS 35.0%
! TCTTTTGCATGCATATGTCA+AGG + chr1.1:1589859-1589878 MS.gene27263:intron 35.0%
! TGACAACATTATTTCTCCCT+TGG + chr1.1:1590807-1590826 MS.gene27263:CDS 35.0%
! TGACAATGTCATTAGCTTGA+GGG - chr1.1:1589416-1589435 None:intergenic 35.0%
!!! ATTCTTTTGAAACAGAGTGG+AGG + chr1.1:1590364-1590383 MS.gene27263:intron 35.0%
AAAACCTTTATGTCGCGACT+CGG - chr1.1:1589568-1589587 None:intergenic 40.0%
AAATCAATGTGCCCAAGATC+AGG + chr1.1:1590781-1590800 MS.gene27263:CDS 40.0%
ATTTGAAAGTTCCACCTGAG+AGG - chr1.1:1590540-1590559 None:intergenic 40.0%
CAACAAGGTCTACTTCATCA+AGG - chr1.1:1590516-1590535 None:intergenic 40.0%
CCAAAGTGAAAATCATGGAC+AGG - chr1.1:1589318-1589337 None:intergenic 40.0%
CCTAACAAAAATTCCGTTCG+AGG + chr1.1:1589982-1590001 MS.gene27263:CDS 40.0%
GCCTTGTCTATGATCAAGTT+GGG + chr1.1:1590994-1591013 MS.gene27263:CDS 40.0%
TCCAAAAGACATTCCTCTAG+TGG - chr1.1:1589364-1589383 None:intergenic 40.0%
TGACATTGTCATGTCAGTCT+TGG + chr1.1:1589425-1589444 MS.gene27263:CDS 40.0%
TGCCTTGTCTATGATCAAGT+TGG + chr1.1:1590993-1591012 MS.gene27263:CDS 40.0%
TTTGAAAGTTCCACCTGAGA+GGG - chr1.1:1590539-1590558 None:intergenic 40.0%
TTTGAGTCTCTCCTTCCTAA+TGG - chr1.1:1590406-1590425 None:intergenic 40.0%
! ACCACTAGAGGAATGTCTTT+TGG + chr1.1:1589360-1589379 MS.gene27263:CDS 40.0%
! AGAGCGTCACTTCATAATGT+AGG + chr1.1:1590646-1590665 MS.gene27263:intron 40.0%
! CATGATTTTCACTTTGGCTG+GGG + chr1.1:1589321-1589340 MS.gene27263:CDS 40.0%
! CCATGATTTTCACTTTGGCT+GGG + chr1.1:1589320-1589339 MS.gene27263:CDS 40.0%
! CCTCGAACGGAATTTTTGTT+AGG - chr1.1:1589985-1590004 None:intergenic 40.0%
! CCTGTCCATGATTTTCACTT+TGG + chr1.1:1589315-1589334 MS.gene27263:CDS 40.0%
! CCTTGTCTATGATCAAGTTG+GGG + chr1.1:1590995-1591014 MS.gene27263:CDS 40.0%
! CTGCGATGCATCAATTTTGT+TGG + chr1.1:1589921-1589940 MS.gene27263:CDS 40.0%
! TCCATGATTTTCACTTTGGC+TGG + chr1.1:1589319-1589338 MS.gene27263:CDS 40.0%
!! CTGGTTGGTTGTTTCCATTT+TGG - chr1.1:1590726-1590745 None:intergenic 40.0%
AATCATGGACAGGATGAGCA+TGG - chr1.1:1589308-1589327 None:intergenic 45.0%
AGGTGCACATACAATTGGTG+TGG + chr1.1:1590666-1590685 MS.gene27263:intron 45.0%
ATCATGGACAGGATGAGCAT+GGG - chr1.1:1589307-1589326 None:intergenic 45.0%
ATGTTGTCACCACCTGATCT+TGG - chr1.1:1590796-1590815 None:intergenic 45.0%
CCCAGCCAAAGTGAAAATCA+TGG - chr1.1:1589323-1589342 None:intergenic 45.0%
CCCCAACTTGATCATAGACA+AGG - chr1.1:1590998-1591017 None:intergenic 45.0%
CTTCAACAGTGGCATTTGGT+GGG - chr1.1:1590465-1590484 None:intergenic 45.0%
GCTTCTCACAGGGAATGTTA+AGG + chr1.1:1590912-1590931 MS.gene27263:CDS 45.0%
TAAAACCAGTGAGAGGACGA+AGG - chr1.1:1591023-1591042 None:intergenic 45.0%
TCGCCATTAAAACCAGTGAG+AGG - chr1.1:1591030-1591049 None:intergenic 45.0%
TGTCATGTCAGTCTTGGAGA+AGG + chr1.1:1589431-1589450 MS.gene27263:CDS 45.0%
TGTTAAGAGGCCTTCAACAG+TGG - chr1.1:1590476-1590495 None:intergenic 45.0%
TGTTAAGGAGACTCGTGACT+TGG + chr1.1:1590927-1590946 MS.gene27263:CDS 45.0%
TGTTGTCACCACCTGATCTT+GGG - chr1.1:1590795-1590814 None:intergenic 45.0%
TTACCTGCACAAAACAGTCG+TGG - chr1.1:1589506-1589525 None:intergenic 45.0%
! ATATTGTTGCGCTTGCTGCT+AGG + chr1.1:1590073-1590092 MS.gene27263:CDS 45.0%
! CAGATGAAGTGCTTCTCACA+GGG + chr1.1:1590902-1590921 MS.gene27263:CDS 45.0%
! TATTGTTGCGCTTGCTGCTA+GGG + chr1.1:1590074-1590093 MS.gene27263:CDS 45.0%
! TCAGATGAAGTGCTTCTCAC+AGG + chr1.1:1590901-1590920 MS.gene27263:CDS 45.0%
! TTCAACAGTGGCATTTGGTG+GGG - chr1.1:1590464-1590483 None:intergenic 45.0%
!!! CGTCCTCTCACTGGTTTTAA+TGG + chr1.1:1591024-1591043 MS.gene27263:CDS 45.0%
AACAGAGTGGAGGACCTAAC+TGG + chr1.1:1590374-1590393 MS.gene27263:intron 50.0%
ACAGAGTGGAGGACCTAACT+GGG + chr1.1:1590375-1590394 MS.gene27263:intron 50.0%
ACTGGGAGCTACCATTAGGA+AGG + chr1.1:1590392-1590411 MS.gene27263:CDS 50.0%
AGGCCTTCAACAGTGGCATT+TGG - chr1.1:1590469-1590488 None:intergenic 50.0%
CCACCAAATGCCACTGTTGA+AGG + chr1.1:1590463-1590482 MS.gene27263:CDS 50.0%
CCTAACTGGGAGCTACCATT+AGG + chr1.1:1590388-1590407 MS.gene27263:CDS 50.0%
CCTAATGGTAGCTCCCAGTT+AGG - chr1.1:1590391-1590410 None:intergenic 50.0%
CCTTCAACAGTGGCATTTGG+TGG - chr1.1:1590466-1590485 None:intergenic 50.0%
CTTGGAGAAGGCCATTGCTA+AGG + chr1.1:1589443-1589462 MS.gene27263:CDS 50.0%
CTTGGGGAACCAAAGTCCAA+GGG - chr1.1:1590826-1590845 None:intergenic 50.0%
TCAATGTGCCCAAGATCAGG+TGG + chr1.1:1590784-1590803 MS.gene27263:CDS 50.0%
TCTGCACATGAGACTGTACG+AGG - chr1.1:1590054-1590073 None:intergenic 50.0%
TCTTGGGGAACCAAAGTCCA+AGG - chr1.1:1590827-1590846 None:intergenic 50.0%
! ATTGTTGCGCTTGCTGCTAG+GGG + chr1.1:1590075-1590094 MS.gene27263:CDS 50.0%
! CATCATGGTGGAACCACTAG+AGG + chr1.1:1589348-1589367 MS.gene27263:CDS 50.0%
! CTTCCACGACTGTTTTGTGC+AGG + chr1.1:1589500-1589519 MS.gene27263:CDS 50.0%
! GATTTTCACTTTGGCTGGGG+TGG + chr1.1:1589324-1589343 MS.gene27263:CDS 50.0%
! TCAACAGTGGCATTTGGTGG+GGG - chr1.1:1590463-1590482 None:intergenic 50.0%
AGCTCCGAGTCGCGACATAA+AGG + chr1.1:1589561-1589580 MS.gene27263:intron 55.0%
GTAGACCTTGTTGCCCTCTC+AGG + chr1.1:1590523-1590542 MS.gene27263:CDS 55.0%
TTCCACCTGAGAGGGCAACA+AGG - chr1.1:1590531-1590550 None:intergenic 55.0%
TTTGGCTGGGGTGGTCATCA+TGG + chr1.1:1589333-1589352 MS.gene27263:CDS 55.0%
GACCTTGTTGCCCTCTCAGG+TGG + chr1.1:1590526-1590545 MS.gene27263:intron 60.0%
GGGAACCTTCGTCCTCTCAC+TGG + chr1.1:1591015-1591034 MS.gene27263:CDS 60.0%
GGCTGGGGTGGTCATCATGG+TGG + chr1.1:1589336-1589355 MS.gene27263:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 1589249 1591080 1589249 ID=MS.gene27263
chr1.1 mRNA 1589249 1591080 1589249 ID=MS.gene27263.t1;Parent=MS.gene27263
chr1.1 exon 1589249 1589521 1589249 ID=MS.gene27263.t1.exon1;Parent=MS.gene27263.t1
chr1.1 CDS 1589249 1589521 1589249 ID=cds.MS.gene27263.t1;Parent=MS.gene27263.t1
chr1.1 exon 1589919 1590110 1589919 ID=MS.gene27263.t1.exon2;Parent=MS.gene27263.t1
chr1.1 CDS 1589919 1590110 1589919 ID=cds.MS.gene27263.t1;Parent=MS.gene27263.t1
chr1.1 exon 1590379 1590544 1590379 ID=MS.gene27263.t1.exon3;Parent=MS.gene27263.t1
chr1.1 CDS 1590379 1590544 1590379 ID=cds.MS.gene27263.t1;Parent=MS.gene27263.t1
chr1.1 exon 1590668 1591080 1590668 ID=MS.gene27263.t1.exon4;Parent=MS.gene27263.t1
chr1.1 CDS 1590668 1591080 1590668 ID=cds.MS.gene27263.t1;Parent=MS.gene27263.t1
Gene Sequence

>MS.gene27263

ATGTCTTTCACCAAAGTCATTCTTCTTGTTGCAGCTTTTCTCTCACTTACACTTTCCCATGCTCATCCTGTCCATGATTTTCACTTTGGCTGGGGTGGTCATCATGGTGGAACCACTAGAGGAATGTCTTTTGGACTTTCTCCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCATGTCAGTCTTGGAGAAGGCCATTGCTAAGGATATCAGAATGGCAGCTTCTCTTCTTCGACTTCACTTCCACGACTGTTTTGTGCAGGTAAATTTCAAACACAATAGCAATACATGTTTTAAATACAGCTCCGAGTCGCGACATAAAGGTTTTTAAGTCTTTTCATTTGTACTGGACACATTTGATTGTACTTCGATATAATATCAAGTTTGCGACTGCAAGTAAAACATAAAATAATATCATAATCATGTATCTAAGTCTTCCTGAATACACTTTCTTAATTTGCCAACAACTTTTGAGAGAAAAAAAATAGATTCATTTCATAAGGAATTAATTCTTATTCGCAGTATATAAAATCATGTATCTTTTTGCTGAGCTATTTTGTTGTATATATTGCTTTGCATTTGTTAAATTTGCTTTGGATTCTTTTGCATGCATATGTCAAGGAGCTGAAAAATTTCTCTTCATTTTACTTTTAACACAGGGCTGCGATGCATCAATTTTGTTGGACGATAGCGCCACACTTGTCAGTGAAAAAAATGGTGGACCTAACAAAAATTCCGTTCGAGGTTTTGAAGTGATTGATGAAATCAAATCTAAGTTGGAACAAGCATGTCCTCGTACAGTCTCATGTGCAGATATTGTTGCGCTTGCTGCTAGGGGATCCACTGTTCTTGTAAGAAAAAACACACATGACTCAAATTGAGACGACCAACTTTTATCTACTTTGCATATGTTATATACTTAGGGGTCATGTTTTTTGAATCGTTGTTAAGAATGAAAAACAACCAATTTTTTAATAGACTATGGTGAAAGAAAATAACATTTTAAGTACAATATGATTAAACCTAGATGTGTGTGTTTCTTTCTGTATATATAAGGTAATCTGACACACAATACTAACATGCTTAATTTGAAACTTGATCAATATTCTTTTGAAACAGAGTGGAGGACCTAACTGGGAGCTACCATTAGGAAGGAGAGACTCAAAAACAGCAAGTCTAAGGGGCTCAAACAAAAACATTCCCCCACCAAATGCCACTGTTGAAGGCCTCTTAACATTTTTCAAGCGTCAAGGCCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGTGGAACTTTCAAATTCTTAATCACATTTTCTATTAGTGTTACATATTACATCTCTGTCTCGTAATAATTGTCACGTTTACACACAAAAATTGTTCTTAAAAGAGCGTCACTTCATAATGTAGGTGCACATACAATTGGTGTGGCAAAATGTGCAACATTCAAGCAAAGACTATACAACCAAAATGGAAACAACCAACCAGATTCGAATCTAGAAAAAACATTTTACTTTGGTTTGAAATCAATGTGCCCAAGATCAGGTGGTGACAACATTATTTCTCCCTTGGACTTTGGTTCCCCAAGAATGTTTGATAATACCTATTACAAACTCTTACTTAGGGGAAAAGGATTGCTTAATTCAGATGAAGTGCTTCTCACAGGGAATGTTAAGGAGACTCGTGACTTGGTGAAGAAATATGCACAAGATGAGAGTCTCTTCTTTCAACAATTTGCCTTGTCTATGATCAAGTTGGGGAACCTTCGTCCTCTCACTGGTTTTAATGGCGAAGTTAGAAAGAATTGTCGTCGAGTTAATTAA
Protein sequence

>MS.gene27263.t1

MSFTKVILLVAAFLSLTLSHAHPVHDFHFGWGGHHGGTTRGMSFGLSPQFYQFSCPQANDIVMSVLEKAIAKDIRMAASLLRLHFHDCFVQGCDASILLDDSATLVSEKNGGPNKNSVRGFEVIDEIKSKLEQACPRTVSCADIVALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATVEGLLTFFKRQGLDEVDLVALSGAHTIGVAKCATFKQRLYNQNGNNQPDSNLEKTFYFGLKSMCPRSGGDNIISPLDFGSPRMFDNTYYKLLLRGKGLLNSDEVLLTGNVKETRDLVKKYAQDESLFFQQFALSMIKLGNLRPLTGFNGEVRKNCRRVN