AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene90718

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90718.t1 MTR_1g022970 98.271 347 6 0 1 347 1 347 0.0 709
MS.gene90718.t1 MTR_8g076820 63.636 308 111 1 40 347 24 330 1.21e-141 404
MS.gene90718.t1 MTR_5g021060 62.252 302 113 1 46 347 30 330 7.26e-138 395
MS.gene90718.t1 MTR_3g072190 52.980 302 133 2 46 347 26 318 6.87e-110 323
MS.gene90718.t1 MTR_4g122640 48.415 347 168 4 1 347 1 336 9.63e-110 323
MS.gene90718.t1 MTR_5g014100 52.229 314 145 3 38 347 19 331 4.79e-108 319
MS.gene90718.t1 MTR_3g466200 52.787 305 132 4 46 347 25 320 1.23e-107 318
MS.gene90718.t1 MTR_4g029170 51.475 305 137 4 45 347 26 321 6.80e-107 316
MS.gene90718.t1 MTR_5g074970 52.941 306 131 4 46 347 30 326 8.20e-107 316
MS.gene90718.t1 MTR_3g094650 50.329 304 140 3 46 347 28 322 5.39e-106 313
MS.gene90718.t1 MTR_2g084020 51.656 302 138 2 46 347 25 318 6.10e-105 311
MS.gene90718.t1 MTR_2g084010 51.656 302 138 2 46 347 25 318 6.58e-105 310
MS.gene90718.t1 MTR_7g072510 47.386 306 152 2 42 347 16 312 1.19e-103 307
MS.gene90718.t1 MTR_4g029180 51.667 300 134 4 50 347 31 321 3.11e-103 306
MS.gene90718.t1 MTR_2g029820 48.077 312 162 0 36 347 19 330 1.04e-102 306
MS.gene90718.t1 MTR_2g029560 48.675 302 155 0 46 347 24 325 1.41e-102 305
MS.gene90718.t1 MTR_2g084080 50.000 302 142 2 46 347 25 317 1.71e-102 304
MS.gene90718.t1 MTR_2g084000 50.000 302 143 2 46 347 26 319 2.89e-102 304
MS.gene90718.t1 MTR_7g093370 48.185 303 156 1 46 347 69 371 4.11e-102 305
MS.gene90718.t1 MTR_5g083860 49.013 304 144 3 46 347 31 325 1.28e-101 302
MS.gene90718.t1 MTR_2g029750 48.077 312 162 0 36 347 19 330 1.39e-101 303
MS.gene90718.t1 MTR_4g029200 50.000 302 142 2 46 347 46 338 2.39e-101 302
MS.gene90718.t1 MTR_1g054205 48.515 303 155 1 46 347 24 326 2.58e-101 302
MS.gene90718.t1 MTR_2g029830 49.007 302 154 0 46 347 28 329 2.67e-101 303
MS.gene90718.t1 MTR_2g029815 48.013 302 157 0 46 347 29 330 7.60e-101 301
MS.gene90718.t1 MTR_5g049280 47.213 305 158 3 46 347 33 337 1.88e-100 300
MS.gene90718.t1 MTR_2g029730 48.344 302 156 0 46 347 25 326 1.98e-100 300
MS.gene90718.t1 MTR_2g084110 49.338 302 144 2 46 347 25 317 3.25e-100 298
MS.gene90718.t1 MTR_2g029740 48.077 312 162 0 36 347 19 330 3.47e-100 300
MS.gene90718.t1 MTR_5g074860 49.342 304 143 4 46 346 29 324 5.08e-100 298
MS.gene90718.t1 MTR_4g029190 49.032 310 146 4 41 347 40 340 8.91e-100 298
MS.gene90718.t1 MTR_2g040000 49.191 309 152 2 42 347 25 331 1.20e-99 298
MS.gene90718.t1 MTR_2g029850 48.675 302 155 0 46 347 29 330 1.89e-99 298
MS.gene90718.t1 MTR_2g029910 49.013 304 152 2 46 347 30 332 1.98e-99 298
MS.gene90718.t1 MTR_2g029860 48.013 302 157 0 46 347 29 330 2.07e-99 298
MS.gene90718.t1 MTR_3g094670 49.013 304 144 3 46 347 28 322 2.86e-99 296
MS.gene90718.t1 MTR_7g072480 49.677 310 139 4 42 347 20 316 3.56e-99 296
MS.gene90718.t1 MTR_5g074760 47.869 305 148 4 46 347 25 321 2.33e-98 294
MS.gene90718.t1 MTR_5g017850 51.171 299 142 3 50 347 31 326 3.30e-98 294
MS.gene90718.t1 MTR_2g084090 49.175 303 144 3 46 347 25 318 3.57e-98 293
MS.gene90718.t1 MTR_2g029800 47.020 302 160 0 46 347 29 330 5.32e-98 294
MS.gene90718.t1 MTR_4g125940 48.355 304 153 2 46 347 28 329 5.75e-98 293
MS.gene90718.t1 MTR_3g094630 49.342 304 143 3 46 347 28 322 6.49e-98 293
MS.gene90718.t1 MTR_5g074740 47.541 305 149 4 46 347 25 321 1.13e-97 292
MS.gene90718.t1 MTR_2g028980 48.675 302 155 0 46 347 29 330 4.00e-97 292
MS.gene90718.t1 MTR_7g026990 48.658 298 143 3 50 347 35 322 1.00e-96 290
MS.gene90718.t1 MTR_5g074710 47.869 305 148 4 46 347 25 321 4.08e-96 288
MS.gene90718.t1 MTR_5g017860 50.167 299 145 3 50 347 31 326 1.49e-95 287
MS.gene90718.t1 MTR_4g030890 47.097 310 159 3 38 347 92 396 1.95e-94 287
MS.gene90718.t1 MTR_4g083710 46.557 305 153 3 46 347 27 324 1.41e-93 282
MS.gene90718.t1 MTR_1g115900 46.711 304 151 4 46 347 27 321 1.81e-93 282
MS.gene90718.t1 MTR_4g031140 46.557 305 158 3 43 347 25 324 2.10e-93 282
MS.gene90718.t1 MTR_3g466180 48.013 302 148 2 46 347 31 323 2.18e-92 279
MS.gene90718.t1 MTR_3g072190 51.351 259 117 2 89 347 2 251 1.60e-91 274
MS.gene90718.t1 MTR_4g125940 49.638 276 135 2 74 347 1 274 3.59e-91 274
MS.gene90718.t1 MTR_3g467600 44.918 305 158 3 46 347 27 324 1.41e-89 271
MS.gene90718.t1 MTR_4g074995 45.246 305 144 4 46 347 24 308 1.11e-87 266
MS.gene90718.t1 MTR_4g074990 44.262 305 144 3 46 347 24 305 3.20e-85 260
MS.gene90718.t1 MTR_1g101830 44.702 302 161 5 46 347 27 322 1.67e-82 253
MS.gene90718.t1 MTR_2g029830 47.860 257 134 0 91 347 5 261 6.37e-82 251
MS.gene90718.t1 MTR_2g088770 45.667 300 157 5 50 347 30 325 6.42e-82 252
MS.gene90718.t1 MTR_5g022870 44.771 306 155 7 45 347 22 316 7.67e-82 251
MS.gene90718.t1 MTR_3g092990 43.813 299 165 3 50 347 30 326 9.17e-82 252
MS.gene90718.t1 MTR_0155s0040 43.234 303 159 7 45 347 26 315 1.76e-80 248
MS.gene90718.t1 MTR_1g077000 42.053 302 162 6 46 347 39 327 1.75e-79 246
MS.gene90718.t1 MTR_8g075100 42.810 306 161 7 45 347 25 319 3.35e-79 245
MS.gene90718.t1 MTR_4g133800 44.295 298 155 6 51 347 46 333 3.87e-79 245
MS.gene90718.t1 MTR_1g086320 42.994 314 173 3 38 347 22 333 6.25e-79 245
MS.gene90718.t1 MTR_2g008710 43.709 302 159 5 50 347 31 325 1.26e-77 241
MS.gene90718.t1 MTR_4g046713 42.244 303 171 3 46 347 27 326 2.65e-77 240
MS.gene90718.t1 MTR_1g086490 41.433 321 175 4 38 347 22 340 1.18e-76 239
MS.gene90718.t1 MTR_1g038680 42.384 302 168 5 50 347 33 332 2.45e-76 238
MS.gene90718.t1 MTR_4g074980 42.715 302 141 5 46 347 25 294 3.71e-76 236
MS.gene90718.t1 MTR_5g074860 42.105 304 126 4 46 346 29 285 5.48e-76 236
MS.gene90718.t1 MTR_1g025980 42.810 306 166 6 42 346 20 317 1.58e-75 236
MS.gene90718.t1 MTR_7g086820 42.617 298 162 6 50 347 24 312 1.22e-74 233
MS.gene90718.t1 MTR_7g107520 42.395 309 170 5 41 347 18 320 1.94e-74 233
MS.gene90718.t1 MTR_4g074980 48.511 235 112 2 46 277 25 253 1.05e-73 229
MS.gene90718.t1 MTR_6g027440 42.667 300 160 6 50 347 25 314 1.42e-73 231
MS.gene90718.t1 MTR_2g437770 42.904 303 161 8 46 347 50 341 8.22e-73 229
MS.gene90718.t1 MTR_4g132490 39.297 313 178 5 42 347 20 327 6.30e-71 224
MS.gene90718.t1 MTR_4g114210 42.405 316 170 5 37 347 12 320 7.64e-71 224
MS.gene90718.t1 MTR_6g043280 40.432 324 173 7 27 347 26 332 1.17e-70 224
MS.gene90718.t1 MTR_7g086870 41.275 298 163 6 50 347 26 311 4.48e-70 221
MS.gene90718.t1 MTR_3g092990 41.472 299 161 4 50 347 30 315 8.28e-70 221
MS.gene90718.t1 MTR_7g029030 38.511 309 170 4 46 347 25 320 1.96e-69 220
MS.gene90718.t1 MTR_4g087965 40.264 303 174 5 46 343 42 342 5.01e-69 220
MS.gene90718.t1 MTR_2g067440 38.630 365 180 8 12 346 36 386 1.24e-68 220
MS.gene90718.t1 MTR_2g078610 40.541 333 163 7 46 346 76 405 4.77e-67 216
MS.gene90718.t1 MTR_2g077990 39.940 333 165 7 46 346 76 405 5.40e-65 211
MS.gene90718.t1 MTR_6g043240 40.656 305 165 7 45 347 41 331 6.98e-65 209
MS.gene90718.t1 MTR_1g009750 36.721 305 187 4 46 347 27 328 3.73e-63 204
MS.gene90718.t1 MTR_5g016010 34.104 346 204 5 1 343 1 325 6.24e-63 203
MS.gene90718.t1 MTR_8g062780 39.016 305 180 5 46 347 23 324 1.47e-62 202
MS.gene90718.t1 MTR_2g099175 36.482 307 183 4 46 347 36 335 1.57e-62 202
MS.gene90718.t1 MTR_6g043460 39.667 300 170 5 45 343 35 324 3.32e-62 202
MS.gene90718.t1 MTR_3g105790 39.145 304 177 4 46 347 25 322 1.89e-61 199
MS.gene90718.t1 MTR_4g095450 37.542 301 178 4 46 343 27 320 6.03e-61 198
MS.gene90718.t1 MTR_2g078280 39.688 320 158 7 46 333 76 392 1.51e-60 199
MS.gene90718.t1 MTR_2g008160 41.479 311 154 8 50 347 28 323 2.31e-60 197
MS.gene90718.t1 MTR_1g066380 39.016 305 175 4 46 347 27 323 3.12e-60 196
MS.gene90718.t1 MTR_0147s0010 37.963 324 165 5 43 346 74 381 1.16e-59 197
MS.gene90718.t1 MTR_4g127670 37.255 306 182 5 46 347 24 323 2.80e-59 194
MS.gene90718.t1 MTR_1g090760 36.721 305 188 4 46 347 28 330 3.75e-59 194
MS.gene90718.t1 MTR_1g066710 38.033 305 178 4 46 347 27 323 1.17e-58 192
MS.gene90718.t1 MTR_1g066640 38.689 305 176 4 46 347 27 323 3.51e-57 188
MS.gene90718.t1 MTR_1g066680 38.436 307 173 6 46 347 27 322 4.86e-57 188
MS.gene90718.t1 MTR_5g033470 37.500 304 181 7 50 347 77 377 6.58e-57 189
MS.gene90718.t1 MTR_5g074700 42.241 232 109 5 119 347 5 214 2.76e-56 182
MS.gene90718.t1 MTR_2g067450 39.542 306 173 7 46 346 11 309 5.19e-56 185
MS.gene90718.t1 MTR_0286s0010 34.967 306 190 6 46 347 34 334 2.41e-55 184
MS.gene90718.t1 MTR_6g008075 34.967 306 190 6 46 347 34 334 2.41e-55 184
MS.gene90718.t1 MTR_2g008730 36.424 302 157 5 50 347 31 301 4.35e-55 182
MS.gene90718.t1 MTR_3g072210 47.668 193 90 4 157 347 55 238 4.48e-53 175
MS.gene90718.t1 MTR_4g132110 35.948 306 177 5 45 343 31 324 2.87e-52 176
MS.gene90718.t1 MTR_1g009750 33.333 303 183 4 46 347 27 311 3.70e-52 175
MS.gene90718.t1 MTR_1g066380 39.847 261 146 4 90 347 3 255 1.98e-50 169
MS.gene90718.t1 MTR_4g132110 35.370 311 177 6 45 343 31 329 5.59e-50 170
MS.gene90718.t1 MTR_2g008160 37.419 310 133 7 50 347 28 288 6.18e-49 166
MS.gene90718.t1 MTR_3g105790 39.662 237 139 3 113 347 12 246 1.82e-44 153
MS.gene90718.t1 MTR_2g008160 48.315 178 84 4 50 225 28 199 1.55e-43 149
MS.gene90718.t1 MTR_7g072490 36.948 249 94 3 92 340 2 187 9.26e-43 147
MS.gene90718.t1 MTR_2g029880 41.146 192 99 2 158 347 9 188 2.40e-41 144
MS.gene90718.t1 MTR_3g072260 59.633 109 44 0 46 154 26 134 5.35e-39 135
MS.gene90718.t1 MTR_3g462850 46.099 141 73 3 210 347 9 149 1.01e-34 124
MS.gene90718.t1 MTR_2g077980 33.333 276 144 8 108 346 11 283 7.11e-30 115
MS.gene90718.t1 MTR_2g078560 34.071 226 116 4 152 346 96 319 3.11e-29 115
MS.gene90718.t1 MTR_7g086790 35.450 189 100 5 93 281 17 183 2.20e-25 101
MS.gene90718.t1 MTR_1g089005 42.017 119 62 2 46 158 15 132 1.09e-23 95.9
MS.gene90718.t1 MTR_6g048160 64.789 71 21 2 85 155 22 88 2.80e-22 90.1
MS.gene90718.t1 MTR_4g114220 47.748 111 40 4 72 182 29 121 3.67e-20 85.9
MS.gene90718.t1 MTR_5g074770 44.086 93 51 1 254 346 17 108 3.42e-19 82.0
MS.gene90718.t1 MTR_3g107060 29.213 267 115 8 77 328 105 312 4.17e-19 87.0
MS.gene90718.t1 MTR_7g086810 36.290 124 52 2 42 164 1 98 5.93e-18 82.4
MS.gene90718.t1 MTR_4g031040 32.759 174 73 3 105 278 1 130 1.86e-17 78.2
MS.gene90718.t1 MTR_2g029930 44.444 90 25 2 46 124 19 94 7.36e-17 75.9
MS.gene90718.t1 MTR_5g058120 33.129 163 96 4 181 343 6 155 2.29e-16 78.2
MS.gene90718.t1 MTR_1g098320 47.368 76 38 1 268 343 47 120 1.01e-15 73.6
MS.gene90718.t1 MTR_7g086785 44.578 83 45 1 89 171 1 82 5.68e-15 71.6
MS.gene90718.t1 MTR_7g107500 43.023 86 46 2 262 347 15 97 7.51e-15 70.1
MS.gene90718.t1 MTR_4g012865 49.296 71 36 0 43 113 74 144 8.35e-15 71.2
MS.gene90718.t1 MTR_0147s0040 41.333 75 42 1 272 346 10 82 1.70e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene90718.t1 AT1G44970 70.940 351 93 4 1 347 1 346 2.95e-176 493
MS.gene90718.t1 AT4G36430 60.927 302 117 1 46 347 30 330 1.70e-139 399
MS.gene90718.t1 AT2G18150 58.385 322 125 2 26 347 24 336 2.44e-139 399
MS.gene90718.t1 AT5G66390 61.589 302 115 1 46 347 33 333 5.65e-138 395
MS.gene90718.t1 AT2G18140 55.696 316 135 2 32 347 25 335 1.45e-129 374
MS.gene90718.t1 AT3G50990 57.616 302 127 1 46 347 41 341 5.08e-125 363
MS.gene90718.t1 AT5G06720 50.662 302 149 0 46 347 32 333 1.97e-110 325
MS.gene90718.t1 AT2G35380 53.548 310 124 4 50 347 34 335 6.28e-105 311
MS.gene90718.t1 AT5G06730 47.682 302 158 0 46 347 33 334 3.23e-104 310
MS.gene90718.t1 AT2G38390 50.495 303 149 1 46 347 31 333 3.86e-104 310
MS.gene90718.t1 AT2G38380 50.165 303 150 1 46 347 31 333 3.60e-101 302
MS.gene90718.t1 AT1G49570 48.246 342 171 4 6 343 7 346 4.73e-101 302
MS.gene90718.t1 AT4G16270 49.379 322 150 7 32 347 34 348 8.24e-101 301
MS.gene90718.t1 AT5G19890 49.515 309 148 4 41 347 25 327 5.68e-100 298
MS.gene90718.t1 AT4G08770 48.684 304 154 2 46 347 24 327 9.61e-100 298
MS.gene90718.t1 AT5G58400 48.197 305 146 4 46 347 30 325 1.06e-99 298
MS.gene90718.t1 AT5G05340 46.711 304 151 3 46 347 30 324 1.09e-99 298
MS.gene90718.t1 AT4G08780 48.355 304 155 2 46 347 24 327 1.16e-99 298
MS.gene90718.t1 AT2G22420 48.344 302 151 3 46 347 23 319 6.34e-99 296
MS.gene90718.t1 AT3G32980 47.039 304 159 2 46 347 31 334 1.40e-95 288
MS.gene90718.t1 AT3G49110 47.697 304 157 2 46 347 33 336 5.15e-95 286
MS.gene90718.t1 AT5G58390 50.492 305 139 4 46 347 21 316 5.57e-95 285
MS.gene90718.t1 AT1G14550 48.515 303 148 3 46 347 26 321 9.90e-94 282
MS.gene90718.t1 AT1G68850 43.770 313 172 3 39 347 23 335 1.15e-93 283
MS.gene90718.t1 AT3G49120 47.039 304 159 2 46 347 32 335 1.95e-93 283
MS.gene90718.t1 AT1G14540 45.364 302 158 2 46 347 21 315 3.21e-90 273
MS.gene90718.t1 AT3G03670 44.482 299 163 2 49 347 26 321 8.19e-88 267
MS.gene90718.t1 AT5G19880 44.262 305 167 2 46 347 25 329 4.30e-86 263
MS.gene90718.t1 AT5G64120 40.058 347 189 7 1 347 1 328 1.21e-82 254
MS.gene90718.t1 AT5G42180 45.215 303 157 6 45 346 22 316 6.89e-82 252
MS.gene90718.t1 AT5G17820 41.946 298 161 5 50 347 28 313 7.08e-82 251
MS.gene90718.t1 AT5G51890 44.262 305 161 6 45 347 25 322 9.57e-82 251
MS.gene90718.t1 AT1G05260 44.554 303 164 4 46 347 26 325 1.10e-81 251
MS.gene90718.t1 AT5G17820 41.946 298 161 5 50 347 81 366 1.55e-80 250
MS.gene90718.t1 AT2G35380 51.765 255 103 4 105 347 1 247 6.05e-80 244
MS.gene90718.t1 AT1G71695 44.118 306 159 6 45 347 43 339 1.92e-79 247
MS.gene90718.t1 AT4G33420 43.894 303 157 6 45 347 36 325 1.55e-78 243
MS.gene90718.t1 AT4G33420 43.894 303 157 6 45 347 83 372 7.31e-78 243
MS.gene90718.t1 AT4G11290 43.333 300 166 3 50 347 29 326 2.16e-77 241
MS.gene90718.t1 AT3G21770 42.581 310 170 5 37 343 20 324 2.42e-77 241
MS.gene90718.t1 AT5G15180 43.092 304 167 5 45 347 31 329 3.31e-76 238
MS.gene90718.t1 AT2G41480 42.904 303 161 5 50 347 33 328 1.15e-72 229
MS.gene90718.t1 AT5G39580 42.475 299 163 6 50 347 29 319 1.65e-72 228
MS.gene90718.t1 AT1G05240 41.196 301 169 5 46 343 26 321 2.75e-72 228
MS.gene90718.t1 AT1G05250 41.196 301 169 5 46 343 26 321 2.75e-72 228
MS.gene90718.t1 AT3G01190 40.984 305 174 5 43 347 23 321 6.93e-71 224
MS.gene90718.t1 AT4G26010 41.137 299 160 6 50 347 26 309 1.24e-70 223
MS.gene90718.t1 AT4G26010 41.137 299 160 6 50 347 54 337 2.43e-70 223
MS.gene90718.t1 AT2G18980 40.000 305 174 4 46 347 25 323 9.08e-70 221
MS.gene90718.t1 AT4G30170 39.032 310 178 5 42 347 23 325 1.02e-68 218
MS.gene90718.t1 AT2G39040 42.071 309 168 6 46 347 46 350 1.52e-68 219
MS.gene90718.t1 AT4G25980 40.594 303 169 5 50 347 30 326 1.62e-68 218
MS.gene90718.t1 AT4G33870 37.048 332 171 4 50 346 72 400 4.00e-68 219
MS.gene90718.t1 AT5G64100 40.199 301 167 7 50 347 41 331 2.25e-67 215
MS.gene90718.t1 AT1G30870 41.967 305 164 7 46 347 51 345 7.08e-67 214
MS.gene90718.t1 AT5G64110 41.196 301 166 5 50 347 38 330 1.03e-66 213
MS.gene90718.t1 AT4G37530 38.158 304 183 3 43 343 24 325 1.11e-65 211
MS.gene90718.t1 AT4G31760 39.739 307 177 3 43 347 26 326 1.47e-65 210
MS.gene90718.t1 AT4G37520 36.877 301 185 3 46 343 27 325 8.10e-64 206
MS.gene90718.t1 AT3G49960 36.393 305 189 3 46 347 27 329 4.15e-63 204
MS.gene90718.t1 AT5G40150 40.132 304 173 5 46 347 32 328 1.63e-62 202
MS.gene90718.t1 AT5G47000 38.636 308 173 7 46 347 33 330 2.01e-62 202
MS.gene90718.t1 AT4G37520 36.545 301 183 4 46 343 27 322 4.75e-62 201
MS.gene90718.t1 AT1G77100 38.889 324 164 8 36 347 18 319 6.74e-62 201
MS.gene90718.t1 AT5G67400 36.928 306 186 4 46 347 27 329 3.20e-61 199
MS.gene90718.t1 AT2G34060 38.033 305 180 7 46 344 42 343 3.44e-61 199
MS.gene90718.t1 AT1G24110 37.908 306 181 7 46 347 22 322 3.22e-59 194
MS.gene90718.t1 AT4G17690 37.377 305 180 5 46 347 26 322 3.55e-59 194
MS.gene90718.t1 AT2G24800 39.016 305 177 5 46 347 31 329 5.04e-59 193
MS.gene90718.t1 AT3G28200 37.171 304 181 4 46 347 21 316 6.21e-59 193
MS.gene90718.t1 AT1G34510 37.793 299 170 6 50 347 26 309 7.01e-59 192
MS.gene90718.t1 AT5G14130 35.314 303 191 4 46 347 32 330 2.90e-58 191
MS.gene90718.t1 AT5G14130 35.314 303 191 4 46 347 73 371 7.97e-58 192
MS.gene90718.t1 AT5G22410 38.000 300 172 8 50 344 32 322 1.90e-57 189
MS.gene90718.t1 AT3G17070 36.624 314 177 7 45 347 37 339 6.86e-57 188
MS.gene90718.t1 AT2G43480 35.599 309 184 6 46 347 35 335 8.49e-57 188
MS.gene90718.t1 AT5G24070 34.462 325 192 7 36 347 19 335 1.31e-56 187
MS.gene90718.t1 AT2G37130 38.079 302 175 5 50 347 3 296 2.67e-56 185
MS.gene90718.t1 AT2G37130 37.908 306 178 5 46 347 30 327 3.63e-56 186
MS.gene90718.t1 AT4G37530 38.281 256 155 2 43 295 24 279 6.02e-56 184
MS.gene90718.t1 AT4G21960 37.742 310 174 5 45 347 30 327 2.44e-55 184
MS.gene90718.t1 AT4G25980 47.561 164 82 3 50 213 75 234 3.29e-43 151
MS.gene90718.t1 AT3G17070 35.055 271 153 8 88 347 18 276 1.06e-42 149
MS.gene90718.t1 AT5G39580 45.455 165 85 3 50 214 29 188 4.67e-39 139
MS.gene90718.t1 AT2G24800 38.614 202 109 3 46 247 31 217 4.31e-36 131
MS.gene90718.t1 AT4G32320 30.337 267 112 8 77 328 114 321 3.97e-20 90.1
MS.gene90718.t1 AT3G42570 35.052 97 62 1 118 213 53 149 4.09e-13 66.6
MS.gene90718.t1 AT4G08390 26.394 269 144 10 80 329 127 360 6.37e-12 66.6
MS.gene90718.t1 AT4G08390 26.394 269 144 10 80 329 127 360 6.37e-12 66.6
MS.gene90718.t1 AT4G08390 26.394 269 144 10 80 329 127 360 6.37e-12 66.6
MS.gene90718.t1 AT4G08390 26.394 269 144 10 80 329 126 359 6.52e-12 66.6

Find 79 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGTTGGTTGTTTCCATTT+TGG 0.258817 1.4:-1624187 None:intergenic
CCTAAGTAAGAGTTTGTAAT+AGG 0.274011 1.4:-1624324 None:intergenic
ACCACTAGAGGAATGTCTTT+TGG 0.298662 1.4:+1622941 MS.gene90718:CDS
AGGTATTATCAAACATTCTT+GGG 0.320019 1.4:-1624304 None:intergenic
CCTATTACAAACTCTTACTT+AGG 0.320265 1.4:+1624324 MS.gene90718:CDS
CAAAGACTATACAACCAAAA+TGG 0.350393 1.4:+1624173 MS.gene90718:CDS
ATTATTTCTCCCTTGGACTT+TGG 0.353163 1.4:+1624278 MS.gene90718:CDS
TTTGAGTCTCTCCTTCCTAA+TGG 0.355118 1.4:-1623864 None:intergenic
TAGGTATTATCAAACATTCT+TGG 0.367240 1.4:-1624305 None:intergenic
GCCTTGTCTATGATCAAGTT+GGG 0.368870 1.4:+1624458 MS.gene90718:CDS
TTTGGCTGGGGTGGTCATCA+TGG 0.381646 1.4:+1622914 MS.gene90718:CDS
AGACCTTCAATAGTTGCATT+TGG 0.390969 1.4:-1623927 None:intergenic
CCACCAAATGCAACTATTGA+AGG 0.405803 1.4:+1623924 MS.gene90718:CDS
GTAGACCTTGTTGCCCTCTC+AGG 0.409416 1.4:+1623984 MS.gene90718:CDS
TATTGTTGCCCTTGCTGCTA+GGG 0.421519 1.4:+1623558 MS.gene90718:CDS
ATATTGTTGCCCTTGCTGCT+AGG 0.427899 1.4:+1623557 MS.gene90718:CDS
AAACTCTTACTTAGGGGAAA+AGG 0.433563 1.4:+1624332 MS.gene90718:CDS
CTATTACAAACTCTTACTTA+GGG 0.433600 1.4:+1624325 MS.gene90718:CDS
TGACAACATTATTTCTCCCT+TGG 0.436794 1.4:+1624271 MS.gene90718:CDS
AATAGAGTGGAGGACCCAAC+TGG 0.447513 1.4:+1623835 MS.gene90718:intron
ATGTTGTCACCACCTGATCT+TGG 0.448426 1.4:-1624257 None:intergenic
AAATCAATGTGCCCAAGATC+AGG 0.449302 1.4:+1624245 MS.gene90718:CDS
TCCTAATGGTAGCTCCCAGT+TGG 0.462642 1.4:-1623850 None:intergenic
GGGAACCTTCGTCCTCTCAC+TGG 0.462709 1.4:+1624479 MS.gene90718:CDS
CCTTCAATAGTTGCATTTGG+TGG 0.468155 1.4:-1623924 None:intergenic
TGCTACAATAAGAATGACTT+TGG 0.469823 1.4:-1622840 None:intergenic
TGCCTTGTCTATGATCAAGT+TGG 0.474042 1.4:+1624457 MS.gene90718:CDS
AATGTAGGTGCACATACAAT+TGG 0.478313 1.4:+1624125 MS.gene90718:intron
TGATGAGATCAAATCTAAGT+TGG 0.478968 1.4:+1623501 MS.gene90718:CDS
TGTTGTCACCACCTGATCTT+GGG 0.480354 1.4:-1624256 None:intergenic
TTTCTAGATTCGAATCTGGT+TGG 0.488001 1.4:-1624202 None:intergenic
CTTCAATAGTTGCATTTGGT+GGG 0.492398 1.4:-1623923 None:intergenic
TGACATAGTCATGTCAGTCT+TGG 0.493447 1.4:+1623006 MS.gene90718:CDS
CCTAATGGTAGCTCCCAGTT+GGG 0.500426 1.4:-1623849 None:intergenic
TCAATAGTTGCATTTGGTGG+GGG 0.508864 1.4:-1623921 None:intergenic
TTCAATAGTTGCATTTGGTG+GGG 0.518047 1.4:-1623922 None:intergenic
TGACTATGTCATTAGCTTGA+GGG 0.518186 1.4:-1622994 None:intergenic
TCAGATGAAGTGCTTCTCAC+AGG 0.521489 1.4:+1624365 MS.gene90718:CDS
GCTTCTCACAGGGAATGTTA+AGG 0.529664 1.4:+1624376 MS.gene90718:CDS
CCCAACTGGGAGCTACCATT+AGG 0.529796 1.4:+1623849 MS.gene90718:CDS
CTTCCACGACTGCTTCGTGC+AGG 0.531991 1.4:+1623081 MS.gene90718:CDS
TTTGAAAGTTCCACCTGAGA+GGG 0.537314 1.4:-1623997 None:intergenic
TCTGCACATGAGACTGTATG+AGG 0.537536 1.4:-1623535 None:intergenic
CATGAAAACTGATAGAATTG+AGG 0.540572 1.4:-1622971 None:intergenic
CCAAAGTGAAAATCATGGAC+AGG 0.542594 1.4:-1622896 None:intergenic
CCCAGCCAAAGTGAAAATCA+TGG 0.562562 1.4:-1622901 None:intergenic
ATTGTTGCCCTTGCTGCTAG+GGG 0.562619 1.4:+1623559 MS.gene90718:CDS
GGCTGGGGTGGTCATCATGG+TGG 0.563986 1.4:+1622917 MS.gene90718:CDS
TGTTAAGGAGACTCGTGACT+TGG 0.564179 1.4:+1624391 MS.gene90718:CDS
CTTGGAGAAGGCCATTGCTA+AGG 0.567799 1.4:+1623024 MS.gene90718:CDS
AATCATGGACAGGATGAGCA+TGG 0.575254 1.4:-1622886 None:intergenic
ATCATGGACAGGATGAGCAT+GGG 0.575357 1.4:-1622885 None:intergenic
TCCAAAAGACATTCCTCTAG+TGG 0.581773 1.4:-1622942 None:intergenic
TCTTGGGGAACCAAAGTCCA+AGG 0.581851 1.4:-1624288 None:intergenic
AGTGGATCCCCTAGCAGCAA+GGG 0.584231 1.4:-1623566 None:intergenic
ATGACTATGTCATTAGCTTG+AGG 0.588045 1.4:-1622995 None:intergenic
CCTTGTCTATGATCAAGTTG+GGG 0.590007 1.4:+1624459 MS.gene90718:CDS
CAGATGAAGTGCTTCTCACA+GGG 0.590201 1.4:+1624366 MS.gene90718:CDS
CAACAAGGTCTACTTCATCA+AGG 0.594873 1.4:-1623974 None:intergenic
CAGTGGATCCCCTAGCAGCA+AGG 0.596237 1.4:-1623567 None:intergenic
GGTATTATCAAACATTCTTG+GGG 0.598190 1.4:-1624303 None:intergenic
CATCATGGTGGAACCACTAG+AGG 0.601048 1.4:+1622929 MS.gene90718:CDS
TTACCTGCACGAAGCAGTCG+TGG 0.601762 1.4:-1623084 None:intergenic
AATCACTTCAAAACCTCGGA+CGG 0.602593 1.4:-1623479 None:intergenic
CCCCAACTTGATCATAGACA+AGG 0.616517 1.4:-1624459 None:intergenic
CATCAATCACTTCAAAACCT+CGG 0.621498 1.4:-1623483 None:intergenic
TATTACAAACTCTTACTTAG+GGG 0.623907 1.4:+1624326 MS.gene90718:CDS
ATTTGAAAGTTCCACCTGAG+AGG 0.625792 1.4:-1623998 None:intergenic
AGTCATGTCAGTCTTGGAGA+AGG 0.628217 1.4:+1623012 MS.gene90718:CDS
ACTGGGAGCTACCATTAGGA+AGG 0.630159 1.4:+1623853 MS.gene90718:CDS
TATTCTGATATCCTTAGCAA+TGG 0.632717 1.4:-1623035 None:intergenic
TTCCACCTGAGAGGGCAACA+AGG 0.641016 1.4:-1623989 None:intergenic
ATAGAGTGGAGGACCCAACT+GGG 0.644537 1.4:+1623836 MS.gene90718:intron
TCAATGTGCCCAAGATCAGG+TGG 0.661889 1.4:+1624248 MS.gene90718:CDS
CTTGGGGAACCAAAGTCCAA+GGG 0.684174 1.4:-1624287 None:intergenic
TCGCCATTAAAACCAGTGAG+AGG 0.697253 1.4:-1624491 None:intergenic
TAAAACCAGTGAGAGGACGA+AGG 0.705812 1.4:-1624484 None:intergenic
AATGACTTTGGTGAAAGACA+TGG 0.712623 1.4:-1622828 None:intergenic
AGGTGCACATACAATTGGTG+TGG 0.734240 1.4:+1624130 MS.gene90718:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACAATTTTTTAATAGACTA+TGG + chr1.4:1623705-1623724 MS.gene90718:intron 15.0%
!!! ATTATTTTATGTTTTACTTG+CGG - chr1.4:1623235-1623254 None:intergenic 15.0%
!!! TTATTTTACTTTTAATGACA+GGG + chr1.4:1623382-1623401 MS.gene90718:intron 15.0%
!!! TTTATTTTACTTTTAATGAC+AGG + chr1.4:1623381-1623400 MS.gene90718:intron 15.0%
!!! AATATTCTTTTGAAATAGAG+TGG + chr1.4:1623822-1623841 MS.gene90718:intron 20.0%
!!! CTAGAAAAAACATTTTACTT+TGG + chr1.4:1624218-1624237 MS.gene90718:CDS 20.0%
!!! TTTTTTCTCTCAAAATTTGT+TGG - chr1.4:1623305-1623324 None:intergenic 20.0%
! ACAATTGTCAGTGAAAAAAA+TGG + chr1.4:1623439-1623458 MS.gene90718:CDS 25.0%
! AGGTATTATCAAACATTCTT+GGG - chr1.4:1624307-1624326 None:intergenic 25.0%
! CATGCAAAGTATATAAAAGT+TGG - chr1.4:1623634-1623653 None:intergenic 25.0%
! CTATTACAAACTCTTACTTA+GGG + chr1.4:1624325-1624344 MS.gene90718:CDS 25.0%
! TAGGTATTATCAAACATTCT+TGG - chr1.4:1624308-1624327 None:intergenic 25.0%
! TATTACAAACTCTTACTTAG+GGG + chr1.4:1624326-1624345 MS.gene90718:CDS 25.0%
! TGTAACACTAATAGAAAATG+TGG - chr1.4:1624030-1624049 None:intergenic 25.0%
!!! TTTTTTTCTTACAAGAACAG+TGG - chr1.4:1623587-1623606 None:intergenic 25.0%
ACTTTGCATGTCATATACTA+AGG + chr1.4:1623644-1623663 MS.gene90718:intron 30.0%
ATTGTCAGTGAAAAAAATGG+TGG + chr1.4:1623442-1623461 MS.gene90718:CDS 30.0%
CAAAGACTATACAACCAAAA+TGG + chr1.4:1624173-1624192 MS.gene90718:CDS 30.0%
CAAATTAAGAACGTGTATTC+AGG - chr1.4:1623282-1623301 None:intergenic 30.0%
CATGAAAACTGATAGAATTG+AGG - chr1.4:1622974-1622993 None:intergenic 30.0%
CCTAAGTAAGAGTTTGTAAT+AGG - chr1.4:1624327-1624346 None:intergenic 30.0%
CCTATTACAAACTCTTACTT+AGG + chr1.4:1624324-1624343 MS.gene90718:CDS 30.0%
CTTGATGTTATATCGAAGTA+CGG - chr1.4:1623204-1623223 None:intergenic 30.0%
CTTTGCATGTCATATACTAA+GGG + chr1.4:1623645-1623664 MS.gene90718:intron 30.0%
GGTATTATCAAACATTCTTG+GGG - chr1.4:1624306-1624325 None:intergenic 30.0%
TATTCTGATATCCTTAGCAA+TGG - chr1.4:1623038-1623057 None:intergenic 30.0%
TGATGAGATCAAATCTAAGT+TGG + chr1.4:1623501-1623520 MS.gene90718:CDS 30.0%
TGCTACAATAAGAATGACTT+TGG - chr1.4:1622843-1622862 None:intergenic 30.0%
TTAAGTCTTTGCATTTGTAC+CGG + chr1.4:1623168-1623187 MS.gene90718:intron 30.0%
TTTGCATGTCATATACTAAG+GGG + chr1.4:1623646-1623665 MS.gene90718:intron 30.0%
! AGATCGTCACTTTATAATGT+AGG + chr1.4:1624110-1624129 MS.gene90718:intron 30.0%
! GCAATACATGTTCTAAATAC+AGG + chr1.4:1623122-1623141 MS.gene90718:intron 30.0%
!!! ATTCTTTTGAAATAGAGTGG+AGG + chr1.4:1623825-1623844 MS.gene90718:intron 30.0%
!!! GTTTTTTCTAGATTCGAATC+TGG - chr1.4:1624209-1624228 None:intergenic 30.0%
!!! TTAACATTTTTCAAGCGTCA+AGG + chr1.4:1623951-1623970 MS.gene90718:CDS 30.0%
AAACTCTTACTTAGGGGAAA+AGG + chr1.4:1624332-1624351 MS.gene90718:CDS 35.0%
AATGTAGGTGCACATACAAT+TGG + chr1.4:1624125-1624144 MS.gene90718:intron 35.0%
AGACCTTCAATAGTTGCATT+TGG - chr1.4:1623930-1623949 None:intergenic 35.0%
CATCAATCACTTCAAAACCT+CGG - chr1.4:1623486-1623505 None:intergenic 35.0%
CTTCAATAGTTGCATTTGGT+GGG - chr1.4:1623926-1623945 None:intergenic 35.0%
TTAAGAACGTGTATTCAGGA+AGG - chr1.4:1623278-1623297 None:intergenic 35.0%
TTTCTAGATTCGAATCTGGT+TGG - chr1.4:1624205-1624224 None:intergenic 35.0%
! ATGACTATGTCATTAGCTTG+AGG - chr1.4:1622998-1623017 None:intergenic 35.0%
! ATTATTTCTCCCTTGGACTT+TGG + chr1.4:1624278-1624297 MS.gene90718:CDS 35.0%
! TCTTTTGCATGCATATGTCA+AGG + chr1.4:1623342-1623361 MS.gene90718:intron 35.0%
! TGACAACATTATTTCTCCCT+TGG + chr1.4:1624271-1624290 MS.gene90718:CDS 35.0%
! TGACTATGTCATTAGCTTGA+GGG - chr1.4:1622997-1623016 None:intergenic 35.0%
! TTCAATAGTTGCATTTGGTG+GGG - chr1.4:1623925-1623944 None:intergenic 35.0%
!! TGTTTTTGTTTGATCCCCTT+AGG - chr1.4:1623899-1623918 None:intergenic 35.0%
AAATCAATGTGCCCAAGATC+AGG + chr1.4:1624245-1624264 MS.gene90718:CDS 40.0%
AATCACTTCAAAACCTCGGA+CGG - chr1.4:1623482-1623501 None:intergenic 40.0%
AGAGAGACAAACACACATCT+AGG - chr1.4:1623768-1623787 None:intergenic 40.0%
ATTTGAAAGTTCCACCTGAG+AGG - chr1.4:1624001-1624020 None:intergenic 40.0%
CAACAAGGTCTACTTCATCA+AGG - chr1.4:1623977-1623996 None:intergenic 40.0%
CCAAAGTGAAAATCATGGAC+AGG - chr1.4:1622899-1622918 None:intergenic 40.0%
CCACCAAATGCAACTATTGA+AGG + chr1.4:1623924-1623943 MS.gene90718:CDS 40.0%
CCTTCAATAGTTGCATTTGG+TGG - chr1.4:1623927-1623946 None:intergenic 40.0%
GCCTTGTCTATGATCAAGTT+GGG + chr1.4:1624458-1624477 MS.gene90718:CDS 40.0%
TCCAAAAGACATTCCTCTAG+TGG - chr1.4:1622945-1622964 None:intergenic 40.0%
TGACATAGTCATGTCAGTCT+TGG + chr1.4:1623006-1623025 MS.gene90718:CDS 40.0%
TGCCTTGTCTATGATCAAGT+TGG + chr1.4:1624457-1624476 MS.gene90718:CDS 40.0%
TTTGAAAGTTCCACCTGAGA+GGG - chr1.4:1624000-1624019 None:intergenic 40.0%
TTTGAGTCTCTCCTTCCTAA+TGG - chr1.4:1623867-1623886 None:intergenic 40.0%
! ACCACTAGAGGAATGTCTTT+TGG + chr1.4:1622941-1622960 MS.gene90718:CDS 40.0%
! ACTCAAAAACAGCTAGCCTA+AGG + chr1.4:1623880-1623899 MS.gene90718:CDS 40.0%
! CATGATTTTCACTTTGGCTG+GGG + chr1.4:1622902-1622921 MS.gene90718:CDS 40.0%
! CCATGATTTTCACTTTGGCT+GGG + chr1.4:1622901-1622920 MS.gene90718:CDS 40.0%
! CCTGTCCATGATTTTCACTT+TGG + chr1.4:1622896-1622915 MS.gene90718:CDS 40.0%
! CCTTGTCTATGATCAAGTTG+GGG + chr1.4:1624459-1624478 MS.gene90718:CDS 40.0%
! CTCAAAAACAGCTAGCCTAA+GGG + chr1.4:1623881-1623900 MS.gene90718:CDS 40.0%
! CTGCGATGCATCAATTTTGT+TGG + chr1.4:1623405-1623424 MS.gene90718:CDS 40.0%
! TCAAAAACAGCTAGCCTAAG+GGG + chr1.4:1623882-1623901 MS.gene90718:CDS 40.0%
! TCAATAGTTGCATTTGGTGG+GGG - chr1.4:1623924-1623943 None:intergenic 40.0%
! TCCATGATTTTCACTTTGGC+TGG + chr1.4:1622900-1622919 MS.gene90718:CDS 40.0%
!! CTGGTTGGTTGTTTCCATTT+TGG - chr1.4:1624190-1624209 None:intergenic 40.0%
AATCATGGACAGGATGAGCA+TGG - chr1.4:1622889-1622908 None:intergenic 45.0%
AGGTGCACATACAATTGGTG+TGG + chr1.4:1624130-1624149 MS.gene90718:intron 45.0%
AGTCATGTCAGTCTTGGAGA+AGG + chr1.4:1623012-1623031 MS.gene90718:CDS 45.0%
ATATTGTTGCCCTTGCTGCT+AGG + chr1.4:1623557-1623576 MS.gene90718:CDS 45.0%
ATCATGGACAGGATGAGCAT+GGG - chr1.4:1622888-1622907 None:intergenic 45.0%
ATGTTGTCACCACCTGATCT+TGG - chr1.4:1624260-1624279 None:intergenic 45.0%
CCCAGCCAAAGTGAAAATCA+TGG - chr1.4:1622904-1622923 None:intergenic 45.0%
CCCCAACTTGATCATAGACA+AGG - chr1.4:1624462-1624481 None:intergenic 45.0%
CCTAACAAAAATTCCGTCCG+AGG + chr1.4:1623466-1623485 MS.gene90718:CDS 45.0%
GAAGTACGGTCAAATGTGTC+CGG - chr1.4:1623190-1623209 None:intergenic 45.0%
GCTTCTCACAGGGAATGTTA+AGG + chr1.4:1624376-1624395 MS.gene90718:CDS 45.0%
TAAAACCAGTGAGAGGACGA+AGG - chr1.4:1624487-1624506 None:intergenic 45.0%
TATTGTTGCCCTTGCTGCTA+GGG + chr1.4:1623558-1623577 MS.gene90718:CDS 45.0%
TCGCCATTAAAACCAGTGAG+AGG - chr1.4:1624494-1624513 None:intergenic 45.0%
TCTGCACATGAGACTGTATG+AGG - chr1.4:1623538-1623557 None:intergenic 45.0%
TGTTAAGGAGACTCGTGACT+TGG + chr1.4:1624391-1624410 MS.gene90718:CDS 45.0%
TGTTGTCACCACCTGATCTT+GGG - chr1.4:1624259-1624278 None:intergenic 45.0%
! CAGATGAAGTGCTTCTCACA+GGG + chr1.4:1624366-1624385 MS.gene90718:CDS 45.0%
! CCTCGGACGGAATTTTTGTT+AGG - chr1.4:1623469-1623488 None:intergenic 45.0%
! TCAGATGAAGTGCTTCTCAC+AGG + chr1.4:1624365-1624384 MS.gene90718:CDS 45.0%
!!! CGTCCTCTCACTGGTTTTAA+TGG + chr1.4:1624488-1624507 MS.gene90718:CDS 45.0%
AATAGAGTGGAGGACCCAAC+TGG + chr1.4:1623835-1623854 MS.gene90718:intron 50.0%
ACTGGGAGCTACCATTAGGA+AGG + chr1.4:1623853-1623872 MS.gene90718:CDS 50.0%
AGGTCTGAGTCGCGACATAA+AGG + chr1.4:1623142-1623161 MS.gene90718:intron 50.0%
ATAGAGTGGAGGACCCAACT+GGG + chr1.4:1623836-1623855 MS.gene90718:intron 50.0%
ATTGTTGCCCTTGCTGCTAG+GGG + chr1.4:1623559-1623578 MS.gene90718:CDS 50.0%
CCTAATGGTAGCTCCCAGTT+GGG - chr1.4:1623852-1623871 None:intergenic 50.0%
CTTGGAGAAGGCCATTGCTA+AGG + chr1.4:1623024-1623043 MS.gene90718:CDS 50.0%
CTTGGGGAACCAAAGTCCAA+GGG - chr1.4:1624290-1624309 None:intergenic 50.0%
TCAATGTGCCCAAGATCAGG+TGG + chr1.4:1624248-1624267 MS.gene90718:CDS 50.0%
TCCTAATGGTAGCTCCCAGT+TGG - chr1.4:1623853-1623872 None:intergenic 50.0%
TCTTGGGGAACCAAAGTCCA+AGG - chr1.4:1624291-1624310 None:intergenic 50.0%
! CATCATGGTGGAACCACTAG+AGG + chr1.4:1622929-1622948 MS.gene90718:CDS 50.0%
! GATTTTCACTTTGGCTGGGG+TGG + chr1.4:1622905-1622924 MS.gene90718:CDS 50.0%
AGTGGATCCCCTAGCAGCAA+GGG - chr1.4:1623569-1623588 None:intergenic 55.0%
CCCAACTGGGAGCTACCATT+AGG + chr1.4:1623849-1623868 MS.gene90718:CDS 55.0%
GTAGACCTTGTTGCCCTCTC+AGG + chr1.4:1623984-1624003 MS.gene90718:CDS 55.0%
TTACCTGCACGAAGCAGTCG+TGG - chr1.4:1623087-1623106 None:intergenic 55.0%
TTCCACCTGAGAGGGCAACA+AGG - chr1.4:1623992-1624011 None:intergenic 55.0%
TTTGGCTGGGGTGGTCATCA+TGG + chr1.4:1622914-1622933 MS.gene90718:CDS 55.0%
CAGTGGATCCCCTAGCAGCA+AGG - chr1.4:1623570-1623589 None:intergenic 60.0%
CTTCCACGACTGCTTCGTGC+AGG + chr1.4:1623081-1623100 MS.gene90718:CDS 60.0%
GACCTTGTTGCCCTCTCAGG+TGG + chr1.4:1623987-1624006 MS.gene90718:intron 60.0%
GGGAACCTTCGTCCTCTCAC+TGG + chr1.4:1624479-1624498 MS.gene90718:CDS 60.0%
GGCTGGGGTGGTCATCATGG+TGG + chr1.4:1622917-1622936 MS.gene90718:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 1622830 1624544 1622830 ID=MS.gene90718
chr1.4 mRNA 1622830 1624544 1622830 ID=MS.gene90718.t1;Parent=MS.gene90718
chr1.4 exon 1622830 1623102 1622830 ID=MS.gene90718.t1.exon1;Parent=MS.gene90718.t1
chr1.4 CDS 1622830 1623102 1622830 ID=cds.MS.gene90718.t1;Parent=MS.gene90718.t1
chr1.4 exon 1623403 1623594 1623403 ID=MS.gene90718.t1.exon2;Parent=MS.gene90718.t1
chr1.4 CDS 1623403 1623594 1623403 ID=cds.MS.gene90718.t1;Parent=MS.gene90718.t1
chr1.4 exon 1623840 1624005 1623840 ID=MS.gene90718.t1.exon3;Parent=MS.gene90718.t1
chr1.4 CDS 1623840 1624005 1623840 ID=cds.MS.gene90718.t1;Parent=MS.gene90718.t1
chr1.4 exon 1624132 1624544 1624132 ID=MS.gene90718.t1.exon4;Parent=MS.gene90718.t1
chr1.4 CDS 1624132 1624544 1624132 ID=cds.MS.gene90718.t1;Parent=MS.gene90718.t1
Gene Sequence

>MS.gene90718

ATGTCTTTCACCAAAGTCATTCTTATTGTAGCAGCTTTTCTTTCAGTTACACTCTCCCATGCTCATCCTGTCCATGATTTTCACTTTGGCTGGGGTGGTCATCATGGTGGAACCACTAGAGGAATGTCTTTTGGACTTTCTCCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATAGTCATGTCAGTCTTGGAGAAGGCCATTGCTAAGGATATCAGAATAGCAGCTTCTCTTCTTCGACTTCACTTCCACGACTGCTTCGTGCAGGTAAATTTCAAACACAATAGCAATACATGTTCTAAATACAGGTCTGAGTCGCGACATAAAGGTTTTTAAGTCTTTGCATTTGTACCGGACACATTTGACCGTACTTCGATATAACATCAAGAATTGCGACCGCAAGTAAAACATAAAATAATATCATAATCATGTATCTAAGCCTTCCTGAATACACGTTCTTAATTTGCCAACAAATTTTGAGAGAAAAAAATAGATTCATTTCATAATCTTTTGCATGCATATGTCAAGGAGCTGAAAAATTTCTCTTTATTTTACTTTTAATGACAGGGCTGCGATGCATCAATTTTGTTGGACGACAGCACTACAATTGTCAGTGAAAAAAATGGTGGACCTAACAAAAATTCCGTCCGAGGTTTTGAAGTGATTGATGAGATCAAATCTAAGTTGGAACAAGCATGTCCTCATACAGTCTCATGTGCAGATATTGTTGCCCTTGCTGCTAGGGGATCCACTGTTCTTGTAAGAAAAAAACACACATGACTCAAATTGAGATGACCAACTTTTATATACTTTGCATGTCATATACTAAGGGGATATGTTTTTTGCATTGTTGTTAAGAATGAAAAACAAACAATTTTTTAATAGACTATGGTGAAAGAAAATAACATTTTAAGAACAATATGATTAAACCTAGATGTGTGTTTGTCTCTCTCTAAATACAAACATGCTTAATTTGAAACTTGATCAATATTCTTTTGAAATAGAGTGGAGGACCCAACTGGGAGCTACCATTAGGAAGGAGAGACTCAAAAACAGCTAGCCTAAGGGGATCAAACAAAAACATTCCCCCACCAAATGCAACTATTGAAGGTCTCTTAACATTTTTCAAGCGTCAAGGCCTTGATGAAGTAGACCTTGTTGCCCTCTCAGGTGGAACTTTCAAATTCTTAACCACATTTTCTATTAGTGTTACATAATATTACTTCTCTGTCTCGTAATAATTGTCACGTTTACACACAAAAATTGTTCTTAAAAGATCGTCACTTTATAATGTAGGTGCACATACAATTGGTGTGGCAAAATGTGCAACATTCAAGCAAAGACTATACAACCAAAATGGAAACAACCAACCAGATTCGAATCTAGAAAAAACATTTTACTTTGGTTTGAAATCAATGTGCCCAAGATCAGGTGGTGACAACATTATTTCTCCCTTGGACTTTGGTTCCCCAAGAATGTTTGATAATACCTATTACAAACTCTTACTTAGGGGAAAAGGATTGCTTAATTCAGATGAAGTGCTTCTCACAGGGAATGTTAAGGAGACTCGTGACTTGGTGAAGAAATATGCACAAGATGAGAGTCTCTTCTTTCAACAATTTGCCTTGTCTATGATCAAGTTGGGGAACCTTCGTCCTCTCACTGGTTTTAATGGCGAAGTTAGAAAGAATTGTCGTCGAGTTAATTAA
Protein sequence

>MS.gene90718.t1

MSFTKVILIVAAFLSVTLSHAHPVHDFHFGWGGHHGGTTRGMSFGLSPQFYQFSCPQANDIVMSVLEKAIAKDIRIAASLLRLHFHDCFVQGCDASILLDDSTTIVSEKNGGPNKNSVRGFEVIDEIKSKLEQACPHTVSCADIVALAARGSTVLSGGPNWELPLGRRDSKTASLRGSNKNIPPPNATIEGLLTFFKRQGLDEVDLVALSGAHTIGVAKCATFKQRLYNQNGNNQPDSNLEKTFYFGLKSMCPRSGGDNIISPLDFGSPRMFDNTYYKLLLRGKGLLNSDEVLLTGNVKETRDLVKKYAQDESLFFQQFALSMIKLGNLRPLTGFNGEVRKNCRRVN