Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043054.t1 | XP_003605420.2 | 95.3 | 320 | 15 | 0 | 1 | 320 | 1 | 320 | 7.50E-171 | 609.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043054.t1 | Q9SJZ2 | 71.5 | 309 | 88 | 0 | 12 | 320 | 7 | 315 | 1.6e-129 | 463.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043054.t1 | G7JKV1 | 95.3 | 320 | 15 | 0 | 1 | 320 | 1 | 320 | 5.4e-171 | 609.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene90718 | MS.gene043054 | PPI |
MS.gene043054 | MS.gene35931 | PPI |
MS.gene043054 | MS.gene014924 | PPI |
MS.gene043054 | MS.gene32635 | PPI |
MS.gene043054 | MS.gene09575 | PPI |
MS.gene043054 | MS.gene35853 | PPI |
MS.gene043054 | MS.gene015231 | PPI |
MS.gene014836 | MS.gene043054 | PPI |
MS.gene043054 | MS.gene029047 | PPI |
MS.gene043054 | MS.gene32715 | PPI |
MS.gene043054 | MS.gene57204 | PPI |
MS.gene043054 | MS.gene20276 | PPI |
MS.gene24236 | MS.gene043054 | PPI |
MS.gene67066 | MS.gene043054 | PPI |
MS.gene043054 | MS.gene072888 | PPI |
MS.gene27263 | MS.gene043054 | PPI |
MS.gene043054 | MS.gene35795 | PPI |
MS.gene043054 | MS.gene44482 | PPI |
MS.gene043054 | MS.gene27001 | PPI |
MS.gene043054 | MS.gene80170 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043054.t1 | MTR_4g031140 | 95.312 | 320 | 15 | 0 | 1 | 320 | 1 | 320 | 0.0 | 612 |
MS.gene043054.t1 | MTR_4g030890 | 85.333 | 300 | 44 | 0 | 21 | 320 | 93 | 392 | 0.0 | 550 |
MS.gene043054.t1 | MTR_3g094650 | 45.000 | 320 | 163 | 5 | 6 | 320 | 7 | 318 | 1.46e-95 | 286 |
MS.gene043054.t1 | MTR_3g072190 | 44.969 | 318 | 160 | 5 | 11 | 320 | 4 | 314 | 9.02e-94 | 281 |
MS.gene043054.t1 | MTR_8g076820 | 46.801 | 297 | 154 | 3 | 28 | 320 | 30 | 326 | 1.61e-93 | 281 |
MS.gene043054.t1 | MTR_3g466200 | 44.620 | 316 | 162 | 5 | 11 | 320 | 8 | 316 | 2.87e-91 | 275 |
MS.gene043054.t1 | MTR_2g029800 | 45.033 | 302 | 161 | 3 | 24 | 320 | 25 | 326 | 1.68e-90 | 274 |
MS.gene043054.t1 | MTR_5g074970 | 43.939 | 330 | 165 | 6 | 1 | 320 | 3 | 322 | 1.68e-89 | 270 |
MS.gene043054.t1 | MTR_5g021060 | 45.118 | 297 | 159 | 3 | 28 | 320 | 30 | 326 | 2.29e-89 | 270 |
MS.gene043054.t1 | MTR_2g029740 | 44.371 | 302 | 163 | 3 | 24 | 320 | 25 | 326 | 6.84e-89 | 270 |
MS.gene043054.t1 | MTR_5g074860 | 44.375 | 320 | 160 | 6 | 12 | 320 | 9 | 321 | 1.70e-87 | 265 |
MS.gene043054.t1 | MTR_5g083860 | 43.750 | 320 | 168 | 4 | 6 | 320 | 9 | 321 | 2.74e-87 | 265 |
MS.gene043054.t1 | MTR_2g029750 | 43.709 | 302 | 165 | 3 | 24 | 320 | 25 | 326 | 3.59e-87 | 266 |
MS.gene043054.t1 | MTR_2g028980 | 43.421 | 304 | 167 | 3 | 22 | 320 | 23 | 326 | 4.45e-87 | 265 |
MS.gene043054.t1 | MTR_7g093370 | 41.104 | 326 | 180 | 5 | 7 | 320 | 42 | 367 | 1.44e-86 | 265 |
MS.gene043054.t1 | MTR_2g040000 | 45.066 | 304 | 157 | 4 | 25 | 320 | 26 | 327 | 2.07e-86 | 263 |
MS.gene043054.t1 | MTR_4g122640 | 43.854 | 301 | 163 | 4 | 24 | 320 | 34 | 332 | 7.00e-86 | 261 |
MS.gene043054.t1 | MTR_1g101830 | 43.408 | 311 | 173 | 3 | 11 | 320 | 10 | 318 | 4.42e-85 | 259 |
MS.gene043054.t1 | MTR_3g094670 | 43.478 | 322 | 169 | 5 | 4 | 320 | 5 | 318 | 5.26e-85 | 259 |
MS.gene043054.t1 | MTR_3g466180 | 44.586 | 314 | 164 | 3 | 10 | 320 | 13 | 319 | 1.12e-84 | 258 |
MS.gene043054.t1 | MTR_4g029170 | 43.218 | 317 | 168 | 5 | 9 | 320 | 8 | 317 | 3.15e-84 | 257 |
MS.gene043054.t1 | MTR_1g022970 | 45.302 | 298 | 158 | 3 | 28 | 320 | 46 | 343 | 4.41e-84 | 257 |
MS.gene043054.t1 | MTR_2g029815 | 41.772 | 316 | 175 | 4 | 14 | 320 | 11 | 326 | 4.92e-84 | 258 |
MS.gene043054.t1 | MTR_5g074760 | 42.236 | 322 | 169 | 6 | 9 | 320 | 3 | 317 | 6.44e-84 | 256 |
MS.gene043054.t1 | MTR_5g074740 | 43.671 | 316 | 164 | 5 | 12 | 320 | 9 | 317 | 1.44e-83 | 255 |
MS.gene043054.t1 | MTR_4g083710 | 42.154 | 325 | 171 | 7 | 7 | 320 | 2 | 320 | 2.55e-83 | 254 |
MS.gene043054.t1 | MTR_7g026990 | 42.089 | 316 | 174 | 2 | 7 | 320 | 10 | 318 | 3.42e-83 | 254 |
MS.gene043054.t1 | MTR_3g094630 | 43.789 | 322 | 168 | 5 | 4 | 320 | 5 | 318 | 5.83e-83 | 254 |
MS.gene043054.t1 | MTR_4g125940 | 40.312 | 320 | 182 | 4 | 8 | 320 | 8 | 325 | 9.24e-82 | 251 |
MS.gene043054.t1 | MTR_2g029820 | 41.722 | 302 | 171 | 3 | 24 | 320 | 25 | 326 | 9.66e-82 | 252 |
MS.gene043054.t1 | MTR_5g017850 | 42.405 | 316 | 175 | 5 | 10 | 320 | 9 | 322 | 2.36e-81 | 249 |
MS.gene043054.t1 | MTR_2g084010 | 42.006 | 319 | 174 | 4 | 6 | 320 | 3 | 314 | 2.73e-81 | 249 |
MS.gene043054.t1 | MTR_2g029830 | 41.667 | 300 | 170 | 3 | 26 | 320 | 26 | 325 | 5.52e-81 | 250 |
MS.gene043054.t1 | MTR_2g084080 | 41.956 | 317 | 170 | 4 | 11 | 320 | 4 | 313 | 6.65e-81 | 248 |
MS.gene043054.t1 | MTR_4g029200 | 42.953 | 298 | 160 | 3 | 26 | 320 | 44 | 334 | 7.77e-81 | 249 |
MS.gene043054.t1 | MTR_5g074710 | 41.925 | 322 | 173 | 5 | 6 | 320 | 3 | 317 | 1.05e-80 | 248 |
MS.gene043054.t1 | MTR_1g054205 | 38.438 | 320 | 191 | 4 | 7 | 320 | 3 | 322 | 1.11e-80 | 248 |
MS.gene043054.t1 | MTR_4g029180 | 44.558 | 294 | 151 | 5 | 32 | 320 | 31 | 317 | 2.04e-80 | 247 |
MS.gene043054.t1 | MTR_5g049280 | 41.176 | 323 | 177 | 6 | 10 | 320 | 12 | 333 | 2.22e-80 | 248 |
MS.gene043054.t1 | MTR_4g029190 | 42.444 | 311 | 166 | 5 | 16 | 320 | 33 | 336 | 4.97e-80 | 247 |
MS.gene043054.t1 | MTR_2g029560 | 42.000 | 300 | 169 | 3 | 26 | 320 | 22 | 321 | 6.20e-80 | 247 |
MS.gene043054.t1 | MTR_2g029860 | 38.125 | 320 | 192 | 4 | 7 | 320 | 7 | 326 | 4.64e-79 | 245 |
MS.gene043054.t1 | MTR_1g025980 | 41.587 | 315 | 179 | 5 | 8 | 320 | 3 | 314 | 7.49e-79 | 243 |
MS.gene043054.t1 | MTR_5g014100 | 43.667 | 300 | 156 | 5 | 32 | 320 | 30 | 327 | 7.77e-79 | 243 |
MS.gene043054.t1 | MTR_2g084020 | 40.752 | 319 | 178 | 4 | 6 | 320 | 3 | 314 | 7.82e-79 | 243 |
MS.gene043054.t1 | MTR_2g084110 | 42.006 | 319 | 173 | 5 | 6 | 320 | 3 | 313 | 8.64e-79 | 243 |
MS.gene043054.t1 | MTR_2g084090 | 40.694 | 317 | 176 | 5 | 9 | 320 | 5 | 314 | 9.01e-79 | 243 |
MS.gene043054.t1 | MTR_2g029730 | 43.189 | 301 | 164 | 4 | 26 | 320 | 23 | 322 | 2.43e-78 | 243 |
MS.gene043054.t1 | MTR_7g072510 | 41.026 | 312 | 174 | 3 | 12 | 320 | 4 | 308 | 3.10e-78 | 241 |
MS.gene043054.t1 | MTR_5g017860 | 41.139 | 316 | 179 | 5 | 10 | 320 | 9 | 322 | 4.04e-78 | 241 |
MS.gene043054.t1 | MTR_2g029850 | 40.728 | 302 | 174 | 3 | 24 | 320 | 25 | 326 | 6.80e-78 | 242 |
MS.gene043054.t1 | MTR_4g074995 | 41.270 | 315 | 156 | 7 | 16 | 320 | 9 | 304 | 1.22e-77 | 239 |
MS.gene043054.t1 | MTR_2g029910 | 40.264 | 303 | 175 | 4 | 24 | 320 | 26 | 328 | 1.96e-77 | 241 |
MS.gene043054.t1 | MTR_3g467600 | 40.625 | 320 | 173 | 7 | 11 | 320 | 8 | 320 | 7.88e-77 | 238 |
MS.gene043054.t1 | MTR_2g084000 | 39.677 | 310 | 176 | 4 | 15 | 320 | 13 | 315 | 8.50e-77 | 238 |
MS.gene043054.t1 | MTR_3g072190 | 45.850 | 253 | 127 | 3 | 71 | 320 | 2 | 247 | 1.81e-75 | 232 |
MS.gene043054.t1 | MTR_7g072480 | 41.667 | 312 | 172 | 3 | 12 | 320 | 8 | 312 | 3.01e-75 | 234 |
MS.gene043054.t1 | MTR_4g074990 | 39.937 | 318 | 162 | 6 | 9 | 320 | 7 | 301 | 3.25e-75 | 233 |
MS.gene043054.t1 | MTR_4g133800 | 41.837 | 294 | 159 | 7 | 31 | 320 | 44 | 329 | 1.17e-74 | 233 |
MS.gene043054.t1 | MTR_4g125940 | 42.435 | 271 | 147 | 4 | 57 | 320 | 2 | 270 | 1.23e-73 | 228 |
MS.gene043054.t1 | MTR_4g046713 | 37.736 | 318 | 193 | 4 | 7 | 320 | 6 | 322 | 1.58e-73 | 229 |
MS.gene043054.t1 | MTR_8g075100 | 40.532 | 301 | 172 | 5 | 22 | 320 | 20 | 315 | 1.62e-73 | 229 |
MS.gene043054.t1 | MTR_0155s0040 | 39.365 | 315 | 173 | 6 | 14 | 320 | 7 | 311 | 1.67e-73 | 229 |
MS.gene043054.t1 | MTR_5g022870 | 39.683 | 315 | 184 | 5 | 8 | 320 | 2 | 312 | 1.84e-73 | 229 |
MS.gene043054.t1 | MTR_1g115900 | 38.924 | 316 | 179 | 5 | 11 | 320 | 10 | 317 | 2.16e-72 | 227 |
MS.gene043054.t1 | MTR_1g077000 | 38.700 | 323 | 179 | 6 | 7 | 320 | 11 | 323 | 2.17e-72 | 227 |
MS.gene043054.t1 | MTR_7g029030 | 38.730 | 315 | 184 | 5 | 10 | 320 | 7 | 316 | 6.60e-72 | 225 |
MS.gene043054.t1 | MTR_4g087965 | 38.643 | 339 | 173 | 10 | 9 | 320 | 12 | 342 | 4.74e-71 | 224 |
MS.gene043054.t1 | MTR_1g009750 | 36.562 | 320 | 190 | 6 | 13 | 320 | 6 | 324 | 2.13e-69 | 219 |
MS.gene043054.t1 | MTR_2g088770 | 37.695 | 321 | 192 | 7 | 5 | 320 | 4 | 321 | 1.05e-68 | 217 |
MS.gene043054.t1 | MTR_7g107520 | 37.417 | 302 | 182 | 5 | 22 | 320 | 19 | 316 | 4.74e-68 | 215 |
MS.gene043054.t1 | MTR_7g086820 | 37.954 | 303 | 168 | 6 | 26 | 320 | 18 | 308 | 5.78e-68 | 215 |
MS.gene043054.t1 | MTR_2g437770 | 39.932 | 293 | 163 | 6 | 32 | 320 | 54 | 337 | 7.41e-68 | 216 |
MS.gene043054.t1 | MTR_4g074980 | 42.353 | 255 | 133 | 4 | 12 | 258 | 5 | 253 | 3.66e-67 | 211 |
MS.gene043054.t1 | MTR_5g016010 | 36.634 | 303 | 186 | 4 | 24 | 320 | 23 | 325 | 4.16e-67 | 213 |
MS.gene043054.t1 | MTR_3g092990 | 35.494 | 324 | 203 | 4 | 1 | 320 | 1 | 322 | 5.07e-67 | 213 |
MS.gene043054.t1 | MTR_4g074980 | 37.143 | 315 | 163 | 6 | 12 | 320 | 5 | 290 | 2.28e-66 | 210 |
MS.gene043054.t1 | MTR_2g008710 | 37.736 | 318 | 186 | 6 | 10 | 320 | 9 | 321 | 5.71e-66 | 210 |
MS.gene043054.t1 | MTR_4g114210 | 37.342 | 316 | 184 | 7 | 13 | 320 | 7 | 316 | 5.30e-65 | 207 |
MS.gene043054.t1 | MTR_7g086870 | 36.184 | 304 | 169 | 6 | 26 | 320 | 20 | 307 | 1.28e-64 | 206 |
MS.gene043054.t1 | MTR_5g074860 | 37.500 | 320 | 143 | 6 | 12 | 320 | 9 | 282 | 2.67e-64 | 205 |
MS.gene043054.t1 | MTR_1g038680 | 41.414 | 297 | 167 | 6 | 31 | 320 | 32 | 328 | 3.75e-64 | 206 |
MS.gene043054.t1 | MTR_8g062780 | 35.759 | 316 | 196 | 4 | 11 | 320 | 6 | 320 | 6.86e-64 | 205 |
MS.gene043054.t1 | MTR_0286s0010 | 37.618 | 319 | 186 | 8 | 10 | 320 | 17 | 330 | 4.92e-63 | 203 |
MS.gene043054.t1 | MTR_6g008075 | 37.618 | 319 | 186 | 8 | 10 | 320 | 17 | 330 | 4.92e-63 | 203 |
MS.gene043054.t1 | MTR_1g086320 | 37.539 | 317 | 191 | 5 | 11 | 320 | 13 | 329 | 2.59e-62 | 201 |
MS.gene043054.t1 | MTR_6g043460 | 35.494 | 324 | 185 | 9 | 12 | 320 | 10 | 324 | 1.60e-61 | 199 |
MS.gene043054.t1 | MTR_6g043280 | 37.884 | 293 | 169 | 7 | 32 | 320 | 45 | 328 | 3.55e-61 | 198 |
MS.gene043054.t1 | MTR_2g029830 | 40.079 | 252 | 146 | 3 | 74 | 320 | 6 | 257 | 3.90e-61 | 196 |
MS.gene043054.t1 | MTR_1g090760 | 35.238 | 315 | 198 | 5 | 12 | 320 | 12 | 326 | 6.40e-61 | 197 |
MS.gene043054.t1 | MTR_4g132490 | 33.775 | 302 | 194 | 3 | 23 | 320 | 24 | 323 | 1.23e-60 | 196 |
MS.gene043054.t1 | MTR_6g027440 | 34.505 | 313 | 198 | 4 | 10 | 320 | 3 | 310 | 2.16e-60 | 196 |
MS.gene043054.t1 | MTR_1g086490 | 37.037 | 324 | 190 | 5 | 11 | 320 | 13 | 336 | 2.33e-60 | 196 |
MS.gene043054.t1 | MTR_4g031040 | 59.195 | 174 | 28 | 2 | 87 | 260 | 1 | 131 | 5.01e-60 | 189 |
MS.gene043054.t1 | MTR_5g033470 | 36.721 | 305 | 177 | 6 | 28 | 320 | 73 | 373 | 1.08e-59 | 196 |
MS.gene043054.t1 | MTR_6g043240 | 37.248 | 298 | 170 | 8 | 28 | 320 | 42 | 327 | 1.35e-59 | 194 |
MS.gene043054.t1 | MTR_2g067440 | 35.241 | 332 | 180 | 5 | 22 | 320 | 54 | 383 | 5.36e-59 | 194 |
MS.gene043054.t1 | MTR_1g009750 | 34.700 | 317 | 183 | 7 | 13 | 320 | 6 | 307 | 1.56e-58 | 191 |
MS.gene043054.t1 | MTR_4g095450 | 34.202 | 307 | 191 | 5 | 20 | 320 | 19 | 320 | 8.49e-58 | 189 |
MS.gene043054.t1 | MTR_4g127670 | 35.452 | 299 | 184 | 5 | 28 | 320 | 24 | 319 | 6.80e-57 | 187 |
MS.gene043054.t1 | MTR_2g077990 | 35.588 | 340 | 183 | 6 | 16 | 320 | 64 | 402 | 8.27e-57 | 189 |
MS.gene043054.t1 | MTR_3g092990 | 33.642 | 324 | 198 | 5 | 1 | 320 | 1 | 311 | 1.07e-56 | 186 |
MS.gene043054.t1 | MTR_2g099175 | 33.555 | 301 | 187 | 5 | 28 | 320 | 36 | 331 | 1.10e-55 | 184 |
MS.gene043054.t1 | MTR_2g078280 | 35.276 | 326 | 177 | 5 | 16 | 308 | 64 | 388 | 1.66e-55 | 185 |
MS.gene043054.t1 | MTR_2g078610 | 35.000 | 340 | 185 | 6 | 16 | 320 | 64 | 402 | 6.12e-55 | 184 |
MS.gene043054.t1 | MTR_1g066380 | 33.444 | 302 | 187 | 5 | 26 | 320 | 25 | 319 | 1.31e-54 | 181 |
MS.gene043054.t1 | MTR_1g066640 | 32.450 | 302 | 190 | 5 | 26 | 320 | 25 | 319 | 1.80e-53 | 178 |
MS.gene043054.t1 | MTR_1g066710 | 32.119 | 302 | 191 | 6 | 26 | 320 | 25 | 319 | 2.99e-52 | 175 |
MS.gene043054.t1 | MTR_2g008160 | 36.066 | 305 | 182 | 8 | 24 | 320 | 20 | 319 | 3.16e-52 | 175 |
MS.gene043054.t1 | MTR_4g132110 | 31.385 | 325 | 201 | 7 | 11 | 320 | 7 | 324 | 5.45e-52 | 174 |
MS.gene043054.t1 | MTR_1g066680 | 33.113 | 302 | 187 | 6 | 26 | 320 | 25 | 318 | 9.13e-52 | 174 |
MS.gene043054.t1 | MTR_4g132110 | 30.909 | 330 | 201 | 8 | 11 | 320 | 7 | 329 | 1.10e-49 | 169 |
MS.gene043054.t1 | MTR_2g008730 | 33.962 | 318 | 174 | 7 | 10 | 320 | 9 | 297 | 6.18e-49 | 166 |
MS.gene043054.t1 | MTR_3g105790 | 32.710 | 321 | 207 | 6 | 5 | 320 | 2 | 318 | 1.34e-48 | 165 |
MS.gene043054.t1 | MTR_2g067450 | 33.981 | 309 | 187 | 6 | 22 | 320 | 5 | 306 | 3.04e-47 | 161 |
MS.gene043054.t1 | MTR_0147s0010 | 31.329 | 316 | 180 | 7 | 28 | 320 | 77 | 378 | 1.72e-44 | 156 |
MS.gene043054.t1 | MTR_3g072210 | 42.857 | 189 | 92 | 5 | 139 | 320 | 55 | 234 | 4.17e-41 | 143 |
MS.gene043054.t1 | MTR_1g066380 | 32.422 | 256 | 159 | 5 | 72 | 320 | 3 | 251 | 4.93e-41 | 144 |
MS.gene043054.t1 | MTR_2g008160 | 32.131 | 305 | 159 | 8 | 24 | 320 | 20 | 284 | 1.57e-39 | 140 |
MS.gene043054.t1 | MTR_2g008160 | 40.805 | 174 | 99 | 3 | 24 | 197 | 20 | 189 | 8.51e-39 | 136 |
MS.gene043054.t1 | MTR_3g072260 | 47.727 | 132 | 65 | 1 | 8 | 135 | 2 | 133 | 7.52e-38 | 132 |
MS.gene043054.t1 | MTR_5g074700 | 37.778 | 225 | 116 | 6 | 101 | 320 | 5 | 210 | 1.06e-37 | 134 |
MS.gene043054.t1 | MTR_7g072490 | 35.043 | 234 | 92 | 4 | 74 | 307 | 2 | 175 | 4.19e-34 | 124 |
MS.gene043054.t1 | MTR_2g029880 | 36.364 | 187 | 102 | 4 | 140 | 320 | 9 | 184 | 2.72e-32 | 119 |
MS.gene043054.t1 | MTR_3g105790 | 33.913 | 230 | 141 | 6 | 99 | 320 | 16 | 242 | 2.03e-30 | 115 |
MS.gene043054.t1 | MTR_7g086790 | 33.508 | 191 | 106 | 5 | 75 | 265 | 17 | 186 | 2.31e-23 | 95.5 |
MS.gene043054.t1 | MTR_2g077980 | 31.295 | 278 | 136 | 11 | 90 | 320 | 11 | 280 | 3.10e-23 | 97.4 |
MS.gene043054.t1 | MTR_5g058120 | 35.625 | 160 | 89 | 4 | 164 | 320 | 7 | 155 | 2.60e-22 | 94.4 |
MS.gene043054.t1 | MTR_2g078560 | 28.205 | 273 | 145 | 6 | 99 | 320 | 44 | 316 | 4.99e-22 | 94.7 |
MS.gene043054.t1 | MTR_6g048160 | 54.167 | 72 | 29 | 2 | 66 | 137 | 21 | 88 | 2.32e-18 | 79.0 |
MS.gene043054.t1 | MTR_4g114220 | 46.429 | 84 | 35 | 2 | 54 | 137 | 29 | 102 | 4.02e-17 | 77.4 |
MS.gene043054.t1 | MTR_7g086810 | 32.500 | 120 | 55 | 2 | 26 | 145 | 4 | 97 | 6.80e-16 | 76.3 |
MS.gene043054.t1 | MTR_1g089005 | 33.071 | 127 | 78 | 2 | 20 | 140 | 7 | 132 | 7.95e-16 | 73.9 |
MS.gene043054.t1 | MTR_3g462850 | 34.058 | 138 | 81 | 5 | 192 | 320 | 9 | 145 | 2.03e-15 | 72.8 |
MS.gene043054.t1 | MTR_1g098320 | 43.243 | 74 | 40 | 1 | 249 | 320 | 47 | 120 | 1.14e-12 | 64.7 |
MS.gene043054.t1 | MTR_4g012865 | 39.726 | 73 | 35 | 1 | 28 | 91 | 77 | 149 | 1.14e-12 | 65.1 |
MS.gene043054.t1 | MTR_7g086785 | 29.496 | 139 | 92 | 2 | 74 | 212 | 4 | 136 | 1.68e-12 | 64.3 |
MS.gene043054.t1 | MTR_2g029930 | 33.333 | 108 | 43 | 3 | 14 | 106 | 1 | 94 | 2.63e-12 | 62.8 |
MS.gene043054.t1 | MTR_3g107060 | 29.878 | 164 | 91 | 6 | 43 | 198 | 91 | 238 | 1.23e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene043054.t1 | AT2G22420 | 71.521 | 309 | 88 | 0 | 12 | 320 | 7 | 315 | 3.27e-171 | 478 |
MS.gene043054.t1 | AT2G18150 | 43.210 | 324 | 171 | 4 | 10 | 320 | 9 | 332 | 1.95e-93 | 281 |
MS.gene043054.t1 | AT4G36430 | 45.791 | 297 | 157 | 3 | 28 | 320 | 30 | 326 | 3.00e-92 | 278 |
MS.gene043054.t1 | AT5G06720 | 44.025 | 318 | 166 | 4 | 15 | 320 | 12 | 329 | 3.64e-92 | 278 |
MS.gene043054.t1 | AT5G06730 | 42.902 | 317 | 169 | 4 | 16 | 320 | 14 | 330 | 6.35e-91 | 275 |
MS.gene043054.t1 | AT5G19890 | 44.444 | 324 | 170 | 5 | 3 | 320 | 4 | 323 | 1.03e-90 | 274 |
MS.gene043054.t1 | AT5G66390 | 44.108 | 297 | 162 | 3 | 28 | 320 | 33 | 329 | 7.45e-90 | 272 |
MS.gene043054.t1 | AT2G18140 | 43.344 | 323 | 171 | 4 | 10 | 320 | 9 | 331 | 9.34e-89 | 269 |
MS.gene043054.t1 | AT4G16270 | 46.758 | 293 | 152 | 4 | 31 | 320 | 53 | 344 | 6.85e-88 | 267 |
MS.gene043054.t1 | AT2G38390 | 43.894 | 303 | 164 | 4 | 24 | 320 | 27 | 329 | 5.77e-86 | 262 |
MS.gene043054.t1 | AT5G05340 | 43.092 | 304 | 159 | 4 | 23 | 320 | 25 | 320 | 1.21e-85 | 261 |
MS.gene043054.t1 | AT3G50990 | 42.475 | 299 | 168 | 3 | 26 | 320 | 39 | 337 | 6.26e-85 | 259 |
MS.gene043054.t1 | AT1G44970 | 44.333 | 300 | 162 | 3 | 26 | 320 | 43 | 342 | 1.80e-84 | 258 |
MS.gene043054.t1 | AT4G08780 | 42.671 | 307 | 169 | 4 | 21 | 320 | 17 | 323 | 2.01e-84 | 258 |
MS.gene043054.t1 | AT5G19880 | 43.438 | 320 | 173 | 5 | 9 | 320 | 6 | 325 | 3.27e-84 | 257 |
MS.gene043054.t1 | AT2G38380 | 43.564 | 303 | 165 | 4 | 24 | 320 | 27 | 329 | 4.00e-84 | 258 |
MS.gene043054.t1 | AT4G08770 | 42.671 | 307 | 169 | 4 | 21 | 320 | 17 | 323 | 6.34e-84 | 257 |
MS.gene043054.t1 | AT5G58400 | 42.593 | 324 | 173 | 5 | 3 | 320 | 5 | 321 | 7.49e-84 | 256 |
MS.gene043054.t1 | AT3G32980 | 43.607 | 305 | 165 | 4 | 23 | 320 | 26 | 330 | 1.91e-83 | 256 |
MS.gene043054.t1 | AT5G51890 | 41.772 | 316 | 180 | 3 | 6 | 319 | 4 | 317 | 2.56e-82 | 252 |
MS.gene043054.t1 | AT3G49110 | 42.763 | 304 | 167 | 4 | 24 | 320 | 29 | 332 | 5.24e-82 | 252 |
MS.gene043054.t1 | AT1G68850 | 39.577 | 331 | 176 | 7 | 11 | 320 | 4 | 331 | 8.45e-81 | 249 |
MS.gene043054.t1 | AT3G49120 | 41.311 | 305 | 172 | 4 | 23 | 320 | 27 | 331 | 3.54e-80 | 248 |
MS.gene043054.t1 | AT1G14540 | 40.317 | 315 | 178 | 4 | 10 | 320 | 3 | 311 | 6.18e-80 | 246 |
MS.gene043054.t1 | AT1G49570 | 42.715 | 302 | 167 | 4 | 25 | 320 | 45 | 346 | 5.76e-79 | 244 |
MS.gene043054.t1 | AT5G42180 | 40.446 | 314 | 183 | 4 | 8 | 320 | 3 | 313 | 6.75e-79 | 243 |
MS.gene043054.t1 | AT5G58390 | 41.905 | 315 | 170 | 5 | 12 | 320 | 5 | 312 | 2.62e-78 | 241 |
MS.gene043054.t1 | AT2G35380 | 44.371 | 302 | 159 | 5 | 28 | 320 | 30 | 331 | 3.17e-77 | 239 |
MS.gene043054.t1 | AT5G17820 | 38.486 | 317 | 182 | 6 | 7 | 320 | 3 | 309 | 7.45e-76 | 235 |
MS.gene043054.t1 | AT1G14550 | 39.873 | 316 | 176 | 6 | 13 | 320 | 8 | 317 | 8.90e-76 | 235 |
MS.gene043054.t1 | AT5G17820 | 38.318 | 321 | 185 | 6 | 3 | 320 | 52 | 362 | 3.83e-75 | 235 |
MS.gene043054.t1 | AT3G49960 | 38.994 | 318 | 187 | 5 | 10 | 320 | 8 | 325 | 4.57e-74 | 231 |
MS.gene043054.t1 | AT4G33420 | 41.924 | 291 | 157 | 5 | 32 | 320 | 41 | 321 | 2.52e-71 | 224 |
MS.gene043054.t1 | AT3G03670 | 37.072 | 321 | 190 | 4 | 7 | 320 | 2 | 317 | 2.69e-71 | 224 |
MS.gene043054.t1 | AT4G33420 | 41.924 | 291 | 157 | 5 | 32 | 320 | 88 | 368 | 6.62e-71 | 224 |
MS.gene043054.t1 | AT5G39580 | 38.339 | 313 | 183 | 7 | 12 | 320 | 9 | 315 | 3.82e-70 | 221 |
MS.gene043054.t1 | AT4G37520 | 37.874 | 301 | 181 | 4 | 26 | 320 | 25 | 325 | 6.29e-70 | 221 |
MS.gene043054.t1 | AT5G64120 | 37.654 | 324 | 182 | 8 | 11 | 320 | 7 | 324 | 6.38e-70 | 221 |
MS.gene043054.t1 | AT5G67400 | 38.284 | 303 | 181 | 4 | 24 | 320 | 23 | 325 | 1.15e-69 | 220 |
MS.gene043054.t1 | AT1G05260 | 38.710 | 310 | 183 | 6 | 16 | 320 | 14 | 321 | 4.94e-69 | 218 |
MS.gene043054.t1 | AT4G37530 | 38.235 | 306 | 183 | 4 | 21 | 320 | 20 | 325 | 5.27e-69 | 218 |
MS.gene043054.t1 | AT3G01190 | 41.875 | 320 | 167 | 10 | 8 | 320 | 10 | 317 | 5.47e-69 | 218 |
MS.gene043054.t1 | AT1G71695 | 39.799 | 299 | 167 | 6 | 28 | 320 | 44 | 335 | 6.07e-69 | 219 |
MS.gene043054.t1 | AT2G41480 | 38.558 | 319 | 178 | 7 | 15 | 320 | 11 | 324 | 1.02e-68 | 218 |
MS.gene043054.t1 | AT4G11290 | 37.267 | 322 | 194 | 7 | 6 | 320 | 2 | 322 | 1.07e-68 | 217 |
MS.gene043054.t1 | AT4G37520 | 37.209 | 301 | 180 | 5 | 26 | 320 | 25 | 322 | 4.74e-67 | 213 |
MS.gene043054.t1 | AT5G15180 | 40.667 | 300 | 165 | 7 | 28 | 320 | 32 | 325 | 4.41e-66 | 211 |
MS.gene043054.t1 | AT2G34060 | 38.235 | 340 | 177 | 12 | 8 | 320 | 9 | 342 | 1.09e-65 | 210 |
MS.gene043054.t1 | AT1G05240 | 39.322 | 295 | 170 | 6 | 32 | 320 | 30 | 321 | 1.60e-65 | 209 |
MS.gene043054.t1 | AT1G05250 | 39.322 | 295 | 170 | 6 | 32 | 320 | 30 | 321 | 1.60e-65 | 209 |
MS.gene043054.t1 | AT3G21770 | 38.065 | 310 | 183 | 6 | 17 | 320 | 18 | 324 | 1.73e-65 | 209 |
MS.gene043054.t1 | AT1G77100 | 37.500 | 320 | 183 | 8 | 9 | 320 | 5 | 315 | 9.05e-65 | 207 |
MS.gene043054.t1 | AT4G30170 | 35.621 | 306 | 179 | 6 | 25 | 320 | 24 | 321 | 4.70e-63 | 203 |
MS.gene043054.t1 | AT5G14130 | 33.435 | 329 | 192 | 6 | 7 | 320 | 10 | 326 | 2.08e-62 | 201 |
MS.gene043054.t1 | AT1G30870 | 39.661 | 295 | 164 | 7 | 32 | 320 | 55 | 341 | 4.03e-62 | 201 |
MS.gene043054.t1 | AT5G14130 | 33.435 | 329 | 192 | 6 | 7 | 320 | 51 | 367 | 7.05e-62 | 201 |
MS.gene043054.t1 | AT4G17690 | 38.000 | 300 | 174 | 6 | 27 | 320 | 25 | 318 | 1.70e-61 | 199 |
MS.gene043054.t1 | AT3G28200 | 36.789 | 299 | 176 | 5 | 28 | 320 | 21 | 312 | 2.27e-61 | 198 |
MS.gene043054.t1 | AT2G18980 | 33.934 | 333 | 193 | 6 | 1 | 320 | 1 | 319 | 2.62e-61 | 198 |
MS.gene043054.t1 | AT5G47000 | 37.304 | 319 | 186 | 7 | 11 | 320 | 13 | 326 | 3.92e-61 | 198 |
MS.gene043054.t1 | AT4G37530 | 40.000 | 260 | 152 | 3 | 21 | 276 | 20 | 279 | 5.99e-61 | 196 |
MS.gene043054.t1 | AT4G25980 | 36.601 | 306 | 182 | 6 | 23 | 320 | 21 | 322 | 8.81e-61 | 197 |
MS.gene043054.t1 | AT1G24110 | 32.588 | 313 | 203 | 5 | 14 | 320 | 8 | 318 | 3.05e-59 | 193 |
MS.gene043054.t1 | AT4G26010 | 36.164 | 318 | 185 | 8 | 7 | 320 | 2 | 305 | 3.60e-59 | 192 |
MS.gene043054.t1 | AT5G40150 | 36.735 | 294 | 176 | 4 | 32 | 320 | 36 | 324 | 3.63e-59 | 193 |
MS.gene043054.t1 | AT4G26010 | 36.164 | 318 | 185 | 8 | 7 | 320 | 30 | 333 | 7.00e-59 | 192 |
MS.gene043054.t1 | AT5G64100 | 34.545 | 330 | 187 | 9 | 10 | 320 | 8 | 327 | 1.44e-58 | 191 |
MS.gene043054.t1 | AT2G39040 | 36.304 | 303 | 181 | 7 | 28 | 320 | 46 | 346 | 5.78e-58 | 190 |
MS.gene043054.t1 | AT4G33870 | 33.234 | 334 | 178 | 4 | 28 | 320 | 68 | 397 | 1.02e-57 | 191 |
MS.gene043054.t1 | AT4G21960 | 34.304 | 309 | 183 | 7 | 23 | 320 | 24 | 323 | 2.86e-57 | 188 |
MS.gene043054.t1 | AT5G64110 | 36.913 | 298 | 176 | 6 | 29 | 320 | 35 | 326 | 6.80e-57 | 187 |
MS.gene043054.t1 | AT3G17070 | 33.133 | 332 | 206 | 5 | 2 | 320 | 7 | 335 | 1.12e-56 | 187 |
MS.gene043054.t1 | AT5G22410 | 36.877 | 301 | 175 | 7 | 28 | 320 | 28 | 321 | 1.97e-55 | 183 |
MS.gene043054.t1 | AT2G24800 | 35.548 | 301 | 184 | 5 | 26 | 320 | 29 | 325 | 3.06e-55 | 183 |
MS.gene043054.t1 | AT1G34510 | 35.000 | 320 | 175 | 10 | 11 | 320 | 9 | 305 | 5.48e-54 | 179 |
MS.gene043054.t1 | AT2G35380 | 42.387 | 243 | 131 | 5 | 87 | 320 | 1 | 243 | 8.40e-53 | 174 |
MS.gene043054.t1 | AT2G37130 | 32.258 | 310 | 195 | 7 | 19 | 320 | 21 | 323 | 1.58e-52 | 176 |
MS.gene043054.t1 | AT2G37130 | 32.997 | 297 | 184 | 7 | 32 | 320 | 3 | 292 | 6.67e-52 | 173 |
MS.gene043054.t1 | AT2G43480 | 35.117 | 299 | 178 | 6 | 32 | 320 | 39 | 331 | 7.69e-52 | 174 |
MS.gene043054.t1 | AT4G31760 | 33.022 | 321 | 199 | 8 | 8 | 320 | 10 | 322 | 2.58e-51 | 172 |
MS.gene043054.t1 | AT5G24070 | 32.776 | 299 | 185 | 6 | 32 | 320 | 39 | 331 | 1.38e-48 | 166 |
MS.gene043054.t1 | AT5G39580 | 40.206 | 194 | 111 | 3 | 12 | 205 | 9 | 197 | 1.46e-44 | 152 |
MS.gene043054.t1 | AT3G17070 | 33.333 | 264 | 164 | 5 | 65 | 320 | 13 | 272 | 7.74e-42 | 146 |
MS.gene043054.t1 | AT4G25980 | 42.775 | 173 | 95 | 3 | 23 | 195 | 66 | 234 | 9.87e-40 | 141 |
MS.gene043054.t1 | AT2G24800 | 39.691 | 194 | 107 | 4 | 26 | 213 | 29 | 218 | 1.99e-34 | 126 |
MS.gene043054.t1 | AT1G77490 | 30.928 | 194 | 109 | 5 | 121 | 308 | 165 | 339 | 5.44e-18 | 84.3 |
MS.gene043054.t1 | AT1G77490 | 30.928 | 194 | 109 | 5 | 121 | 308 | 165 | 339 | 7.39e-18 | 84.0 |
MS.gene043054.t1 | AT4G08390 | 29.648 | 199 | 111 | 6 | 121 | 311 | 185 | 362 | 1.38e-14 | 73.9 |
MS.gene043054.t1 | AT4G08390 | 29.648 | 199 | 111 | 6 | 121 | 311 | 186 | 363 | 1.44e-14 | 73.9 |
MS.gene043054.t1 | AT4G08390 | 29.648 | 199 | 111 | 6 | 121 | 311 | 186 | 363 | 1.44e-14 | 73.9 |
MS.gene043054.t1 | AT4G08390 | 29.648 | 199 | 111 | 6 | 121 | 311 | 186 | 363 | 1.44e-14 | 73.9 |
MS.gene043054.t1 | AT3G42570 | 34.737 | 95 | 61 | 1 | 100 | 193 | 53 | 147 | 1.79e-13 | 67.4 |
Find 58 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCAATTGATCCTGTATTT+AGG | 0.134391 | 4.2:-73699351 | MS.gene043054:CDS |
ATAACTGATGCAACACTTCT+TGG | 0.239498 | 4.2:+73700742 | None:intergenic |
TGTTGAAGGAATGTTGAAAT+TGG | 0.241814 | 4.2:-73699116 | MS.gene043054:CDS |
CCTAATCTCACTTCCCAATT+AGG | 0.252124 | 4.2:+73699589 | None:intergenic |
CAACCAAGTCCTTGAAATAT+TGG | 0.258540 | 4.2:+73699245 | None:intergenic |
TGCAATTGATCCTGTATTTA+GGG | 0.261821 | 4.2:-73699350 | MS.gene043054:CDS |
TGCAGACAGGAGGACCTAAT+TGG | 0.285329 | 4.2:-73699603 | MS.gene043054:intron |
AACTATGCTTGGAGAGAAAT+TGG | 0.290246 | 4.2:-73700391 | MS.gene043054:CDS |
TGGACTTGGCATGATATTAC+TGG | 0.322076 | 4.2:+73699531 | None:intergenic |
ACTCTCAGGATCACACTCTA+TGG | 0.326808 | 4.2:-73699440 | MS.gene043054:CDS |
GGAAGTGAGATTAGGAAGAT+TGG | 0.383464 | 4.2:-73699581 | MS.gene043054:CDS |
CTGATAAGCCTGGTCAAGTT+AGG | 0.391273 | 4.2:-73699081 | MS.gene043054:CDS |
AAGGACTTGGTTGGTGGAAG+GGG | 0.412024 | 4.2:-73699235 | MS.gene043054:CDS |
TTGTGCTGATATCATAATCA+TGG | 0.414358 | 4.2:-73700280 | MS.gene043054:CDS |
GTTGAAGGAATGTTGAAATT+GGG | 0.420650 | 4.2:-73699115 | MS.gene043054:CDS |
CTAAATACAGGATCAATTGC+AGG | 0.420661 | 4.2:+73699352 | None:intergenic |
CTGACAATTGTTTCAGCTTG+TGG | 0.421262 | 4.2:+73700796 | None:intergenic |
TGAAGTTGTTGATGAGGTTA+CGG | 0.424842 | 4.2:-73700337 | MS.gene043054:CDS |
TCAAGTTCTTCCCTAAATAC+AGG | 0.427013 | 4.2:+73699340 | None:intergenic |
TTTCGATAACCAATATTTCA+AGG | 0.438590 | 4.2:-73699254 | MS.gene043054:CDS |
CAAGGACTTGGTTGGTGGAA+GGG | 0.442363 | 4.2:-73699236 | MS.gene043054:CDS |
TTCTAGAGATGCTGTAGCAC+TGG | 0.460212 | 4.2:-73700256 | MS.gene043054:intron |
GCAGACAGGAGGACCTAATT+GGG | 0.460309 | 4.2:-73699602 | MS.gene043054:intron |
CAATTCTTCCTAACTTGACC+AGG | 0.463130 | 4.2:+73699073 | None:intergenic |
CCTAATTGGGAAGTGAGATT+AGG | 0.463783 | 4.2:-73699589 | MS.gene043054:CDS |
TAACCAATATTTCAAGGACT+TGG | 0.464692 | 4.2:-73699248 | MS.gene043054:CDS |
AGGGTCAGGCTTTCCGCTAC+CGG | 0.465665 | 4.2:+73699372 | None:intergenic |
AAAGACCTTGTAGCACTCTC+AGG | 0.475027 | 4.2:-73699454 | MS.gene043054:CDS |
AGAGCAGTGGCATTAGATCT+TGG | 0.483837 | 4.2:+73699511 | None:intergenic |
ACAGGATCAATTGCAGGGTC+AGG | 0.489409 | 4.2:+73699358 | None:intergenic |
GCTTTAGAGAAGGCTTGTCC+TGG | 0.494063 | 4.2:-73700312 | MS.gene043054:CDS |
TCAAGGACTTGGTTGGTGGA+AGG | 0.501873 | 4.2:-73699237 | MS.gene043054:CDS |
CAATATTTCAAGGACTTGGT+TGG | 0.502030 | 4.2:-73699244 | MS.gene043054:CDS |
AATTTCTCTCCAAGCATAGT+TGG | 0.513582 | 4.2:+73700393 | None:intergenic |
TAATTTGTGCAGGGGTGTGA+TGG | 0.515516 | 4.2:-73700438 | MS.gene043054:intron |
GTGGCATTAGATCTTGGACT+TGG | 0.525131 | 4.2:+73699517 | None:intergenic |
ATCATTTGAAGTTGTTGATG+AGG | 0.525248 | 4.2:-73700343 | MS.gene043054:CDS |
GATGTTGATCAAAACAAGAC+AGG | 0.532101 | 4.2:-73699301 | MS.gene043054:CDS |
ACATCAGCGGATCTTCGACC+TGG | 0.537774 | 4.2:-73700838 | MS.gene043054:CDS |
TATTTCAAGGACTTGGTTGG+TGG | 0.538804 | 4.2:-73699241 | MS.gene043054:CDS |
AAATCACAGGAGTTGCATCA+AGG | 0.548807 | 4.2:+73699275 | None:intergenic |
GATGATACACCAACTATGCT+TGG | 0.551588 | 4.2:-73700402 | MS.gene043054:CDS |
TTTCGGCTATACAATCAATC+CGG | 0.568350 | 4.2:-73699391 | MS.gene043054:CDS |
TCCCTTTCATTGCAGACAGG+AGG | 0.569641 | 4.2:-73699613 | MS.gene043054:intron |
CTCTCAGGATCACACTCTAT+GGG | 0.574191 | 4.2:-73699439 | MS.gene043054:CDS |
GACTTGCAGTCTGATAAGCC+TGG | 0.574994 | 4.2:-73699091 | MS.gene043054:CDS |
GGTTACGGAGGCTTTAGAGA+AGG | 0.587989 | 4.2:-73700322 | MS.gene043054:CDS |
TATTGGTTATCGAAAATCAC+AGG | 0.593232 | 4.2:+73699262 | None:intergenic |
CATCAGCGGATCTTCGACCT+GGG | 0.594622 | 4.2:-73700837 | MS.gene043054:CDS |
CTATACAATCAATCCGGTAG+CGG | 0.596485 | 4.2:-73699385 | MS.gene043054:CDS |
GTGATCCTGAGAGTGCTACA+AGG | 0.617824 | 4.2:+73699449 | None:intergenic |
GAAGAGATTAATGAGAGCAG+TGG | 0.625249 | 4.2:+73699498 | None:intergenic |
TAAATACAGGATCAATTGCA+GGG | 0.640618 | 4.2:+73699353 | None:intergenic |
TGGAAGGGGATTTCTCAACT+CGG | 0.657592 | 4.2:-73699221 | MS.gene043054:CDS |
TCAGCACAAGAAACAACACC+AGG | 0.669733 | 4.2:+73700294 | None:intergenic |
AGTTGTTGATGAGGTTACGG+AGG | 0.670605 | 4.2:-73700334 | MS.gene043054:CDS |
CATAATCATAGTAACATCAG+CGG | 0.678749 | 4.2:-73700851 | MS.gene043054:CDS |
GAAGATCAGAAACATAAACA+TGG | 0.722748 | 4.2:+73700882 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTTAAAAAATAATAATA+GGG | + | chr4.2:73699447-73699466 | None:intergenic | 0.0% |
!! | TTTATTTAAAAAATAATAAT+AGG | + | chr4.2:73699448-73699467 | None:intergenic | 0.0% |
!!! | ATAATTGCAATAAAATTTTT+TGG | - | chr4.2:73699391-73699410 | MS.gene043054:CDS | 10.0% |
!!! | TAATTTTATGATTTATGAAA+AGG | - | chr4.2:73699767-73699786 | MS.gene043054:intron | 10.0% |
!!! | TGATAAAATAAATCTATTTT+AGG | - | chr4.2:73700011-73700030 | MS.gene043054:intron | 10.0% |
!!! | TTTATAAAATGATTTTTCTT+TGG | - | chr4.2:73699501-73699520 | MS.gene043054:CDS | 10.0% |
!! | AATGAAAGGGAAATAAAAAT+AGG | + | chr4.2:73700354-73700373 | None:intergenic | 20.0% |
!! | ATGAAAGGGAAATAAAAATA+GGG | + | chr4.2:73700353-73700372 | None:intergenic | 20.0% |
!! | CTAATTTATATGGACAATAT+TGG | + | chr4.2:73700144-73700163 | None:intergenic | 20.0% |
!! | GATAATGTGTCTAATTTATA+TGG | + | chr4.2:73700154-73700173 | None:intergenic | 20.0% |
! | AGCTACAAATTAGATCAATA+TGG | + | chr4.2:73700090-73700109 | None:intergenic | 25.0% |
! | ATATGGACAATATTGGAAAA+GGG | + | chr4.2:73700137-73700156 | None:intergenic | 25.0% |
! | TATATGGACAATATTGGAAA+AGG | + | chr4.2:73700138-73700157 | None:intergenic | 25.0% |
! | TATCGAGAAGAAAATAGATT+TGG | - | chr4.2:73700170-73700189 | MS.gene043054:intron | 25.0% |
! | TTTCGATAACCAATATTTCA+AGG | - | chr4.2:73700722-73700741 | MS.gene043054:CDS | 25.0% |
!!! | GTTGTTTTTCAATCATGTTT+CGG | - | chr4.2:73700568-73700587 | MS.gene043054:intron | 25.0% |
!!! | TATGGTAAACATTTTAGCAT+TGG | + | chr4.2:73700072-73700091 | None:intergenic | 25.0% |
!!! | TTTTTCAAAGCATTTGTTGA+AGG | - | chr4.2:73700846-73700865 | MS.gene043054:CDS | 25.0% |
ACAGTTTGATCTCGAATTTA+AGG | - | chr4.2:73700228-73700247 | MS.gene043054:intron | 30.0% | |
CATAATCATAGTAACATCAG+CGG | - | chr4.2:73699125-73699144 | MS.gene043054:CDS | 30.0% | |
GAAGATCAGAAACATAAACA+TGG | + | chr4.2:73699097-73699116 | None:intergenic | 30.0% | |
GTTGAAGGAATGTTGAAATT+GGG | - | chr4.2:73700861-73700880 | MS.gene043054:CDS | 30.0% | |
TAAATACAGGATCAATTGCA+GGG | + | chr4.2:73700626-73700645 | None:intergenic | 30.0% | |
TAACCAATATTTCAAGGACT+TGG | - | chr4.2:73700728-73700747 | MS.gene043054:CDS | 30.0% | |
TGCAATTGATCCTGTATTTA+GGG | - | chr4.2:73700626-73700645 | MS.gene043054:intron | 30.0% | |
TGTTGAAGGAATGTTGAAAT+TGG | - | chr4.2:73700860-73700879 | MS.gene043054:CDS | 30.0% | |
! | ATCATTTGAAGTTGTTGATG+AGG | - | chr4.2:73699633-73699652 | MS.gene043054:intron | 30.0% |
! | GGATCTCATTAATTTGAGAT+CGG | + | chr4.2:73700300-73700319 | None:intergenic | 30.0% |
! | TAACACTGAGCTTGTATTTT+TGG | + | chr4.2:73700503-73700522 | None:intergenic | 30.0% |
! | TATTGGTTATCGAAAATCAC+AGG | + | chr4.2:73700717-73700736 | None:intergenic | 30.0% |
! | TTGTGCTGATATCATAATCA+TGG | - | chr4.2:73699696-73699715 | MS.gene043054:intron | 30.0% |
!! | ATGAGTTGTTTAATTTGTGC+AGG | - | chr4.2:73699528-73699547 | MS.gene043054:CDS | 30.0% |
!! | TCACTTTTCCACAAACAAAA+GGG | - | chr4.2:73700790-73700809 | MS.gene043054:CDS | 30.0% |
!! | TGAGTTGTTTAATTTGTGCA+GGG | - | chr4.2:73699529-73699548 | MS.gene043054:CDS | 30.0% |
!! | TTCACTTTTCCACAAACAAA+AGG | - | chr4.2:73700789-73700808 | MS.gene043054:CDS | 30.0% |
AACTATGCTTGGAGAGAAAT+TGG | - | chr4.2:73699585-73699604 | MS.gene043054:CDS | 35.0% | |
AATTTCTCTCCAAGCATAGT+TGG | + | chr4.2:73699586-73699605 | None:intergenic | 35.0% | |
ATAACTGATGCAACACTTCT+TGG | + | chr4.2:73699237-73699256 | None:intergenic | 35.0% | |
CAACCAAGTCCTTGAAATAT+TGG | + | chr4.2:73700734-73700753 | None:intergenic | 35.0% | |
CTAAATACAGGATCAATTGC+AGG | + | chr4.2:73700627-73700646 | None:intergenic | 35.0% | |
CTGCAATTGATCCTGTATTT+AGG | - | chr4.2:73700625-73700644 | MS.gene043054:intron | 35.0% | |
GATGTTGATCAAAACAAGAC+AGG | - | chr4.2:73700675-73700694 | MS.gene043054:intron | 35.0% | |
TCAAGTTCTTCCCTAAATAC+AGG | + | chr4.2:73700639-73700658 | None:intergenic | 35.0% | |
TGGAGAAACACACAAAAGAT+TGG | + | chr4.2:73700052-73700071 | None:intergenic | 35.0% | |
TTTCGGCTATACAATCAATC+CGG | - | chr4.2:73700585-73700604 | MS.gene043054:intron | 35.0% | |
! | CAATATTTCAAGGACTTGGT+TGG | - | chr4.2:73700732-73700751 | MS.gene043054:CDS | 35.0% |
! | CTCATTAATTTGAGATCGGA+TGG | + | chr4.2:73700296-73700315 | None:intergenic | 35.0% |
! | TGAAGTTGTTGATGAGGTTA+CGG | - | chr4.2:73699639-73699658 | MS.gene043054:intron | 35.0% |
!! | GAGTTGTTTAATTTGTGCAG+GGG | - | chr4.2:73699530-73699549 | MS.gene043054:CDS | 35.0% |
!!! | CATGTTTTTGAGTAATACCC+AGG | + | chr4.2:73699159-73699178 | None:intergenic | 35.0% |
!!! | TTGTTTTGATCAACATCTCG+AGG | + | chr4.2:73700672-73700691 | None:intergenic | 35.0% |
AAATCACAGGAGTTGCATCA+AGG | + | chr4.2:73700704-73700723 | None:intergenic | 40.0% | |
ATTTCCCTTTCATTGCAGAC+AGG | - | chr4.2:73700360-73700379 | MS.gene043054:CDS | 40.0% | |
CAATTCTTCCTAACTTGACC+AGG | + | chr4.2:73700906-73700925 | None:intergenic | 40.0% | |
CCTAATCTCACTTCCCAATT+AGG | + | chr4.2:73700390-73700409 | None:intergenic | 40.0% | |
CCTAATTGGGAAGTGAGATT+AGG | - | chr4.2:73700387-73700406 | MS.gene043054:CDS | 40.0% | |
CTATACAATCAATCCGGTAG+CGG | - | chr4.2:73700591-73700610 | MS.gene043054:intron | 40.0% | |
CTGACAATTGTTTCAGCTTG+TGG | + | chr4.2:73699183-73699202 | None:intergenic | 40.0% | |
GAAGAGATTAATGAGAGCAG+TGG | + | chr4.2:73700481-73700500 | None:intergenic | 40.0% | |
GATGATACACCAACTATGCT+TGG | - | chr4.2:73699574-73699593 | MS.gene043054:CDS | 40.0% | |
GGAAGTGAGATTAGGAAGAT+TGG | - | chr4.2:73700395-73700414 | MS.gene043054:CDS | 40.0% | |
TGGACTTGGCATGATATTAC+TGG | + | chr4.2:73700448-73700467 | None:intergenic | 40.0% | |
TTGAATATGCAGTCTCAGCA+AGG | + | chr4.2:73700327-73700346 | None:intergenic | 40.0% | |
! | TATTTCAAGGACTTGGTTGG+TGG | - | chr4.2:73700735-73700754 | MS.gene043054:CDS | 40.0% |
!! | CTCACAAACCCTTTTGTTTG+TGG | + | chr4.2:73700801-73700820 | None:intergenic | 40.0% |
AAAGACCTTGTAGCACTCTC+AGG | - | chr4.2:73700522-73700541 | MS.gene043054:intron | 45.0% | |
ACTCTCAGGATCACACTCTA+TGG | - | chr4.2:73700536-73700555 | MS.gene043054:intron | 45.0% | |
AGAGCAGTGGCATTAGATCT+TGG | + | chr4.2:73700468-73700487 | None:intergenic | 45.0% | |
CTCTCAGGATCACACTCTAT+GGG | - | chr4.2:73700537-73700556 | MS.gene043054:intron | 45.0% | |
CTGATAAGCCTGGTCAAGTT+AGG | - | chr4.2:73700895-73700914 | MS.gene043054:CDS | 45.0% | |
GTGGCATTAGATCTTGGACT+TGG | + | chr4.2:73700462-73700481 | None:intergenic | 45.0% | |
TCAGCACAAGAAACAACACC+AGG | + | chr4.2:73699685-73699704 | None:intergenic | 45.0% | |
TCCTCCTGTCTGCAATGAAA+GGG | + | chr4.2:73700367-73700386 | None:intergenic | 45.0% | |
TGGAAGGGGATTTCTCAACT+CGG | - | chr4.2:73700755-73700774 | MS.gene043054:CDS | 45.0% | |
! | AGTTGTTGATGAGGTTACGG+AGG | - | chr4.2:73699642-73699661 | MS.gene043054:intron | 45.0% |
! | TAATTTGTGCAGGGGTGTGA+TGG | - | chr4.2:73699538-73699557 | MS.gene043054:CDS | 45.0% |
! | TTCTAGAGATGCTGTAGCAC+TGG | - | chr4.2:73699720-73699739 | MS.gene043054:intron | 45.0% |
!!! | TTTTTAAATAAAATAATGAT+AGG | - | chr4.2:73699456-73699475 | MS.gene043054:CDS | 5.0% |
ACAGGATCAATTGCAGGGTC+AGG | + | chr4.2:73700621-73700640 | None:intergenic | 50.0% | |
ATGCAGTCTCAGCAAGGATC+TGG | + | chr4.2:73700321-73700340 | None:intergenic | 50.0% | |
GACTTGCAGTCTGATAAGCC+TGG | - | chr4.2:73700885-73700904 | MS.gene043054:CDS | 50.0% | |
GCAGACAGGAGGACCTAATT+GGG | - | chr4.2:73700374-73700393 | MS.gene043054:CDS | 50.0% | |
GTCCTCCTGTCTGCAATGAA+AGG | + | chr4.2:73700368-73700387 | None:intergenic | 50.0% | |
TCCCTTTCATTGCAGACAGG+AGG | - | chr4.2:73700363-73700382 | MS.gene043054:CDS | 50.0% | |
TGCAGACAGGAGGACCTAAT+TGG | - | chr4.2:73700373-73700392 | MS.gene043054:CDS | 50.0% | |
!! | AAGGACTTGGTTGGTGGAAG+GGG | - | chr4.2:73700741-73700760 | MS.gene043054:CDS | 50.0% |
!! | CAAGGACTTGGTTGGTGGAA+GGG | - | chr4.2:73700740-73700759 | MS.gene043054:CDS | 50.0% |
!! | GCTTTAGAGAAGGCTTGTCC+TGG | - | chr4.2:73699664-73699683 | MS.gene043054:intron | 50.0% |
!! | GGTTACGGAGGCTTTAGAGA+AGG | - | chr4.2:73699654-73699673 | MS.gene043054:intron | 50.0% |
!! | GTGATCCTGAGAGTGCTACA+AGG | + | chr4.2:73700530-73700549 | None:intergenic | 50.0% |
!! | TCAAGGACTTGGTTGGTGGA+AGG | - | chr4.2:73700739-73700758 | MS.gene043054:CDS | 50.0% |
ACATCAGCGGATCTTCGACC+TGG | - | chr4.2:73699138-73699157 | MS.gene043054:CDS | 55.0% | |
CATCAGCGGATCTTCGACCT+GGG | - | chr4.2:73699139-73699158 | MS.gene043054:CDS | 55.0% | |
AGGGTCAGGCTTTCCGCTAC+CGG | + | chr4.2:73700607-73700626 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 73699069 | 73700929 | 73699069 | ID=MS.gene043054 |
chr4.2 | mRNA | 73699069 | 73700929 | 73699069 | ID=MS.gene043054.t1;Parent=MS.gene043054 |
chr4.2 | exon | 73700711 | 73700929 | 73700711 | ID=MS.gene043054.t1.exon1;Parent=MS.gene043054.t1 |
chr4.2 | CDS | 73700711 | 73700929 | 73700711 | ID=cds.MS.gene043054.t1;Parent=MS.gene043054.t1 |
chr4.2 | exon | 73700257 | 73700448 | 73700257 | ID=MS.gene043054.t1.exon2;Parent=MS.gene043054.t1 |
chr4.2 | CDS | 73700257 | 73700448 | 73700257 | ID=cds.MS.gene043054.t1;Parent=MS.gene043054.t1 |
chr4.2 | exon | 73699069 | 73699620 | 73699069 | ID=MS.gene043054.t1.exon3;Parent=MS.gene043054.t1 |
chr4.2 | CDS | 73699069 | 73699620 | 73699069 | ID=cds.MS.gene043054.t1;Parent=MS.gene043054.t1 |
Gene Sequence |
Protein sequence |