Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene046084.t1 | XP_013445570.1 | 96.4 | 673 | 23 | 1 | 1 | 673 | 1 | 672 | 0.00E+00 | 1246.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene046084.t1 | Q94AS9 | 77.4 | 619 | 132 | 3 | 60 | 672 | 76 | 692 | 1.4e-289 | 996.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene046084.t1 | A0A072TQU5 | 96.4 | 673 | 23 | 1 | 1 | 673 | 1 | 672 | 0.0e+00 | 1246.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene070509 | MS.gene046084 | PPI |
MS.gene046084 | MS.gene016758 | PPI |
MS.gene046084 | MS.gene070511 | PPI |
MS.gene81620 | MS.gene046084 | PPI |
MS.gene046084 | MS.gene057884 | PPI |
MS.gene070505 | MS.gene046084 | PPI |
MS.gene057886 | MS.gene046084 | PPI |
MS.gene070507 | MS.gene046084 | PPI |
MS.gene070492 | MS.gene046084 | PPI |
MS.gene81615 | MS.gene046084 | PPI |
MS.gene81622 | MS.gene046084 | PPI |
MS.gene046084 | MS.gene67840 | PPI |
MS.gene016743 | MS.gene046084 | PPI |
MS.gene046084 | MS.gene81617 | PPI |
MS.gene057883 | MS.gene046084 | PPI |
MS.gene016742 | MS.gene046084 | PPI |
MS.gene070510 | MS.gene046084 | PPI |
MS.gene046084 | MS.gene070503 | PPI |
MS.gene37911 | MS.gene046084 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene046084.t1 | MTR_8g464570 | 97.623 | 673 | 15 | 1 | 1 | 673 | 1 | 672 | 0.0 | 1366 |
MS.gene046084.t1 | MTR_2g081110 | 72.393 | 652 | 155 | 6 | 38 | 672 | 24 | 667 | 0.0 | 987 |
MS.gene046084.t1 | MTR_7g012260 | 50.789 | 634 | 286 | 11 | 45 | 667 | 88 | 706 | 0.0 | 619 |
MS.gene046084.t1 | MTR_3g109030 | 39.389 | 589 | 328 | 12 | 62 | 636 | 72 | 645 | 5.27e-128 | 395 |
MS.gene046084.t1 | MTR_4g058730 | 37.762 | 572 | 329 | 12 | 62 | 624 | 58 | 611 | 3.99e-126 | 387 |
MS.gene046084.t1 | MTR_4g130820 | 37.979 | 574 | 337 | 10 | 59 | 625 | 95 | 656 | 4.00e-124 | 385 |
MS.gene046084.t1 | MTR_2g094860 | 36.806 | 576 | 333 | 12 | 64 | 628 | 78 | 633 | 1.25e-123 | 383 |
MS.gene046084.t1 | MTR_2g460590 | 37.748 | 604 | 348 | 13 | 62 | 653 | 42 | 629 | 4.21e-122 | 379 |
MS.gene046084.t1 | MTR_1g028370 | 35.324 | 586 | 352 | 10 | 58 | 634 | 78 | 645 | 1.03e-120 | 376 |
MS.gene046084.t1 | MTR_1g064240 | 36.125 | 609 | 364 | 12 | 65 | 665 | 73 | 664 | 9.22e-119 | 371 |
MS.gene046084.t1 | MTR_3g091080 | 36.395 | 577 | 340 | 11 | 58 | 625 | 76 | 634 | 1.03e-117 | 368 |
MS.gene046084.t1 | MTR_3g088875 | 37.782 | 577 | 333 | 14 | 64 | 628 | 37 | 599 | 2.42e-117 | 367 |
MS.gene046084.t1 | MTR_8g027755 | 34.258 | 613 | 377 | 12 | 28 | 628 | 49 | 647 | 4.29e-115 | 362 |
MS.gene046084.t1 | MTR_7g117310 | 34.880 | 582 | 346 | 9 | 58 | 625 | 24 | 586 | 1.90e-114 | 358 |
MS.gene046084.t1 | MTR_7g117310 | 34.880 | 582 | 346 | 9 | 58 | 625 | 78 | 640 | 6.32e-114 | 358 |
MS.gene046084.t1 | MTR_7g117310 | 34.880 | 582 | 346 | 9 | 58 | 625 | 90 | 652 | 8.59e-114 | 358 |
MS.gene046084.t1 | MTR_7g034605 | 35.974 | 606 | 358 | 14 | 40 | 635 | 29 | 614 | 3.06e-113 | 355 |
MS.gene046084.t1 | MTR_6g477760 | 35.462 | 595 | 356 | 15 | 54 | 633 | 114 | 695 | 1.04e-104 | 334 |
MS.gene046084.t1 | MTR_6g075290 | 36.130 | 584 | 342 | 14 | 60 | 629 | 190 | 756 | 1.68e-99 | 322 |
MS.gene046084.t1 | MTR_6g075440 | 32.446 | 601 | 355 | 15 | 54 | 630 | 160 | 733 | 4.13e-97 | 315 |
MS.gene046084.t1 | MTR_6g075440 | 32.446 | 601 | 355 | 15 | 54 | 630 | 160 | 733 | 6.71e-97 | 315 |
MS.gene046084.t1 | MTR_5g007630 | 34.512 | 594 | 344 | 15 | 54 | 630 | 163 | 728 | 8.06e-94 | 306 |
MS.gene046084.t1 | MTR_6g075290 | 35.636 | 550 | 323 | 14 | 94 | 629 | 183 | 715 | 1.87e-85 | 284 |
MS.gene046084.t1 | MTR_6g075290 | 35.926 | 540 | 315 | 14 | 104 | 629 | 32 | 554 | 2.53e-85 | 279 |
MS.gene046084.t1 | MTR_6g075390 | 32.310 | 554 | 335 | 15 | 54 | 590 | 106 | 636 | 2.54e-82 | 274 |
MS.gene046084.t1 | MTR_6g075410 | 29.215 | 599 | 366 | 22 | 57 | 629 | 92 | 658 | 1.33e-68 | 237 |
MS.gene046084.t1 | MTR_6g076060 | 31.974 | 466 | 283 | 11 | 181 | 630 | 14 | 461 | 3.31e-62 | 216 |
MS.gene046084.t1 | MTR_6g075320 | 34.746 | 118 | 74 | 2 | 65 | 181 | 151 | 266 | 2.05e-16 | 80.9 |
MS.gene046084.t1 | MTR_2g094810 | 31.250 | 112 | 71 | 2 | 148 | 254 | 12 | 122 | 6.44e-12 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene046084.t1 | AT5G54250 | 77.383 | 619 | 132 | 3 | 60 | 672 | 76 | 692 | 0.0 | 1003 |
MS.gene046084.t1 | AT5G54250 | 77.383 | 619 | 132 | 3 | 60 | 672 | 76 | 692 | 0.0 | 1003 |
MS.gene046084.t1 | AT5G54250 | 77.383 | 619 | 132 | 3 | 60 | 672 | 76 | 692 | 0.0 | 1003 |
MS.gene046084.t1 | AT5G54250 | 76.575 | 619 | 132 | 4 | 60 | 672 | 76 | 687 | 0.0 | 986 |
MS.gene046084.t1 | AT5G15410 | 48.563 | 661 | 325 | 9 | 17 | 667 | 66 | 721 | 0.0 | 597 |
MS.gene046084.t1 | AT5G15410 | 48.563 | 661 | 325 | 9 | 17 | 667 | 67 | 722 | 0.0 | 597 |
MS.gene046084.t1 | AT2G28260 | 37.500 | 576 | 335 | 12 | 61 | 628 | 26 | 584 | 1.77e-127 | 391 |
MS.gene046084.t1 | AT2G28260 | 37.500 | 576 | 335 | 12 | 61 | 628 | 66 | 624 | 2.23e-127 | 392 |
MS.gene046084.t1 | AT5G53130 | 36.395 | 588 | 342 | 13 | 50 | 625 | 69 | 636 | 3.12e-124 | 385 |
MS.gene046084.t1 | AT2G24610 | 38.330 | 587 | 335 | 13 | 62 | 636 | 71 | 642 | 7.17e-124 | 385 |
MS.gene046084.t1 | AT2G24610 | 38.396 | 586 | 334 | 13 | 62 | 635 | 86 | 656 | 2.16e-123 | 384 |
MS.gene046084.t1 | AT1G01340 | 35.902 | 610 | 357 | 11 | 53 | 655 | 58 | 640 | 1.11e-122 | 381 |
MS.gene046084.t1 | AT1G01340 | 35.902 | 610 | 357 | 11 | 53 | 655 | 53 | 635 | 1.20e-122 | 381 |
MS.gene046084.t1 | AT3G48010 | 37.815 | 595 | 335 | 12 | 52 | 628 | 33 | 610 | 1.54e-122 | 380 |
MS.gene046084.t1 | AT4G30360 | 37.201 | 586 | 342 | 11 | 64 | 637 | 72 | 643 | 6.17e-119 | 372 |
MS.gene046084.t1 | AT5G14870 | 37.801 | 582 | 341 | 14 | 64 | 636 | 41 | 610 | 7.98e-119 | 371 |
MS.gene046084.t1 | AT2G23980 | 36.519 | 586 | 351 | 11 | 59 | 634 | 72 | 646 | 1.20e-117 | 368 |
MS.gene046084.t1 | AT4G01010 | 34.846 | 617 | 363 | 14 | 50 | 655 | 53 | 641 | 1.41e-117 | 367 |
MS.gene046084.t1 | AT4G01010 | 34.846 | 617 | 363 | 14 | 50 | 655 | 53 | 641 | 1.41e-117 | 367 |
MS.gene046084.t1 | AT2G23980 | 36.519 | 586 | 351 | 11 | 59 | 634 | 99 | 673 | 2.34e-117 | 368 |
MS.gene046084.t1 | AT2G23980 | 36.519 | 586 | 351 | 11 | 59 | 634 | 99 | 673 | 2.34e-117 | 368 |
MS.gene046084.t1 | AT2G23980 | 36.519 | 586 | 351 | 11 | 59 | 634 | 99 | 673 | 2.34e-117 | 368 |
MS.gene046084.t1 | AT2G23980 | 36.519 | 586 | 351 | 11 | 59 | 634 | 99 | 673 | 2.34e-117 | 368 |
MS.gene046084.t1 | AT2G23980 | 36.519 | 586 | 351 | 11 | 59 | 634 | 99 | 673 | 2.34e-117 | 368 |
MS.gene046084.t1 | AT5G57940 | 36.815 | 584 | 339 | 12 | 59 | 628 | 84 | 651 | 1.14e-116 | 365 |
MS.gene046084.t1 | AT5G57940 | 36.815 | 584 | 339 | 12 | 59 | 628 | 84 | 651 | 1.14e-116 | 365 |
MS.gene046084.t1 | AT5G57940 | 36.815 | 584 | 339 | 12 | 59 | 628 | 77 | 644 | 2.03e-116 | 365 |
MS.gene046084.t1 | AT1G19780 | 36.968 | 587 | 335 | 12 | 59 | 628 | 93 | 661 | 6.09e-116 | 365 |
MS.gene046084.t1 | AT1G15990 | 37.217 | 575 | 339 | 13 | 65 | 628 | 92 | 655 | 3.33e-114 | 360 |
MS.gene046084.t1 | AT4G30560 | 36.041 | 591 | 346 | 14 | 59 | 634 | 73 | 646 | 7.37e-114 | 358 |
MS.gene046084.t1 | AT4G30560 | 36.041 | 591 | 346 | 14 | 59 | 634 | 73 | 646 | 7.37e-114 | 358 |
MS.gene046084.t1 | AT4G30560 | 36.041 | 591 | 346 | 14 | 59 | 634 | 73 | 646 | 7.37e-114 | 358 |
MS.gene046084.t1 | AT4G30560 | 36.041 | 591 | 346 | 14 | 59 | 634 | 99 | 672 | 1.10e-113 | 358 |
MS.gene046084.t1 | AT4G30560 | 36.041 | 591 | 346 | 14 | 59 | 634 | 99 | 672 | 1.10e-113 | 358 |
MS.gene046084.t1 | AT2G23980 | 35.140 | 609 | 351 | 12 | 59 | 634 | 99 | 696 | 2.21e-112 | 356 |
MS.gene046084.t1 | AT2G23980 | 35.140 | 609 | 351 | 12 | 59 | 634 | 99 | 696 | 2.21e-112 | 356 |
MS.gene046084.t1 | AT2G23980 | 35.140 | 609 | 351 | 12 | 59 | 634 | 99 | 696 | 2.21e-112 | 356 |
MS.gene046084.t1 | AT2G23980 | 35.140 | 609 | 351 | 12 | 59 | 634 | 99 | 696 | 2.21e-112 | 356 |
MS.gene046084.t1 | AT2G46430 | 32.159 | 653 | 383 | 15 | 9 | 628 | 3 | 628 | 1.97e-108 | 344 |
MS.gene046084.t1 | AT2G46430 | 32.159 | 653 | 383 | 15 | 9 | 628 | 3 | 628 | 1.97e-108 | 344 |
MS.gene046084.t1 | AT3G17700 | 35.192 | 574 | 336 | 16 | 64 | 622 | 193 | 745 | 2.17e-100 | 324 |
MS.gene046084.t1 | AT3G17690 | 34.775 | 578 | 343 | 16 | 64 | 628 | 159 | 715 | 1.39e-98 | 318 |
MS.gene046084.t1 | AT1G19780 | 38.182 | 440 | 245 | 7 | 203 | 628 | 24 | 450 | 2.63e-92 | 296 |
MS.gene046084.t1 | AT3G17700 | 35.686 | 510 | 300 | 15 | 52 | 554 | 179 | 667 | 5.50e-90 | 295 |
MS.gene046084.t1 | AT2G46450 | 32.463 | 613 | 350 | 18 | 49 | 628 | 1 | 582 | 6.50e-87 | 286 |
MS.gene046084.t1 | AT2G46450 | 32.463 | 613 | 350 | 18 | 49 | 628 | 1 | 582 | 6.50e-87 | 286 |
MS.gene046084.t1 | AT3G17690 | 35.020 | 494 | 296 | 13 | 64 | 552 | 159 | 632 | 1.37e-86 | 285 |
MS.gene046084.t1 | AT2G46450 | 32.308 | 585 | 325 | 18 | 62 | 628 | 15 | 546 | 3.93e-82 | 272 |
MS.gene046084.t1 | AT2G46450 | 32.026 | 612 | 331 | 19 | 49 | 628 | 1 | 559 | 7.12e-82 | 271 |
MS.gene046084.t1 | AT2G46440 | 31.966 | 585 | 354 | 16 | 62 | 628 | 28 | 586 | 2.15e-75 | 254 |
MS.gene046084.t1 | AT2G46440 | 33.656 | 413 | 241 | 11 | 233 | 628 | 12 | 408 | 3.89e-58 | 203 |
MS.gene046084.t1 | AT3G17690 | 33.244 | 373 | 229 | 10 | 64 | 431 | 159 | 516 | 2.12e-54 | 195 |
MS.gene046084.t1 | AT5G37500 | 23.832 | 214 | 156 | 5 | 350 | 560 | 262 | 471 | 8.53e-13 | 72.0 |
MS.gene046084.t1 | AT5G37500 | 23.832 | 214 | 156 | 5 | 350 | 560 | 208 | 417 | 1.14e-12 | 72.0 |
MS.gene046084.t1 | AT5G37500 | 23.832 | 214 | 156 | 5 | 350 | 560 | 262 | 471 | 1.30e-12 | 71.6 |
MS.gene046084.t1 | AT5G37500 | 23.944 | 213 | 157 | 4 | 350 | 560 | 262 | 471 | 1.32e-12 | 71.6 |
MS.gene046084.t1 | AT3G02850 | 21.028 | 214 | 162 | 5 | 350 | 560 | 279 | 488 | 2.98e-11 | 67.0 |
MS.gene046084.t1 | AT3G02850 | 21.127 | 213 | 163 | 4 | 350 | 560 | 279 | 488 | 3.18e-11 | 67.0 |
MS.gene046084.t1 | AT3G02850 | 21.127 | 213 | 163 | 4 | 350 | 560 | 279 | 488 | 3.99e-11 | 67.0 |
Find 159 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCATACAGAGTGATAAATTT+TGG | 0.162911 | 8.4:+45294212 | None:intergenic |
TGACTGATGCTTTGCACTTT+TGG | 0.188658 | 8.4:-45297277 | MS.gene046084:CDS |
CATCTTGACAAGGGCCTTCT+AGG | 0.213081 | 8.4:+45287076 | None:intergenic |
TCAATTATGGAGCTTATAAA+TGG | 0.229313 | 8.4:-45290297 | MS.gene046084:CDS |
TGTCATAAGCCAATGTATTA+TGG | 0.245750 | 8.4:-45290412 | MS.gene046084:CDS |
TCTTGCACCCACTTTGCTCT+TGG | 0.280047 | 8.4:+45297443 | None:intergenic |
AGGGGCATGTTGGTACTTAT+TGG | 0.280943 | 8.4:-45290509 | MS.gene046084:CDS |
TGAGACATTTGGATGCTCTT+TGG | 0.287862 | 8.4:+45290482 | None:intergenic |
GAATGGCATGGGCAGGGAAT+AGG | 0.293158 | 8.4:-45290357 | MS.gene046084:CDS |
GGGGCATGTTGGTACTTATT+GGG | 0.297779 | 8.4:-45290508 | MS.gene046084:CDS |
ATACCATCTTTGTTTAGATT+TGG | 0.299313 | 8.4:-45289339 | MS.gene046084:CDS |
GGTGCCATTGTTTCAACATA+TGG | 0.301666 | 8.4:-45289150 | MS.gene046084:CDS |
CTTGCACCCACTTTGCTCTT+GGG | 0.306607 | 8.4:+45297444 | None:intergenic |
AGTCCTGATCACTTCAATTA+TGG | 0.314000 | 8.4:-45290310 | MS.gene046084:CDS |
ATGTCTCTTCTTAAACCTTC+AGG | 0.316026 | 8.4:+45289365 | None:intergenic |
AGTATGTGACACAACATTTC+AGG | 0.324397 | 8.4:-45287775 | MS.gene046084:intron |
GGTGGCTATTCCTTCTTTGT+TGG | 0.326354 | 8.4:-45294298 | MS.gene046084:CDS |
CTTGTCAAGATGTTCTTCAT+TGG | 0.326604 | 8.4:-45287065 | MS.gene046084:CDS |
ACATTGCTCTTTGAGACATT+TGG | 0.328723 | 8.4:+45290471 | None:intergenic |
TTGAAAAGTTGCTGCATGTT+AGG | 0.334418 | 8.4:-45287935 | MS.gene046084:CDS |
ACAAATAGCATTCTTTGAAC+TGG | 0.335513 | 8.4:+45288001 | None:intergenic |
CTTCTAGTCACTATGTTGAT+TGG | 0.344641 | 8.4:-45289766 | MS.gene046084:CDS |
GAAATTCTGACCTGAGGTAT+AGG | 0.359819 | 8.4:+45297110 | None:intergenic |
GTGGGGATGAGCTCCTTTCA+TGG | 0.360376 | 8.4:-45287898 | MS.gene046084:CDS |
CTTGAAACAACTGAGGCTTT+TGG | 0.361125 | 8.4:-45287818 | MS.gene046084:CDS |
TCATCCCCACTGAAGTTTCC+TGG | 0.365139 | 8.4:+45287911 | None:intergenic |
TTTGATGTCATAAGCACTTT+CGG | 0.368024 | 8.4:-45289856 | MS.gene046084:intron |
GTCATTAAGCCCCAGAAGAT+TGG | 0.374914 | 8.4:+45290226 | None:intergenic |
CACCGCGGATGGCCGCCGCT+TGG | 0.376753 | 8.4:-45297192 | MS.gene046084:CDS |
CAAAATACGCAATCATGTTA+AGG | 0.380943 | 8.4:+45294127 | None:intergenic |
CGACGCACACAAAACCTATC+TGG | 0.382347 | 8.4:-45294183 | MS.gene046084:CDS |
AAATCATCTTGATTAGGCTT+TGG | 0.382366 | 8.4:+45287001 | None:intergenic |
AATGGCATGGGCAGGGAATA+GGG | 0.385231 | 8.4:-45290356 | MS.gene046084:CDS |
AAGTCAAAATCATCTTGATT+AGG | 0.388135 | 8.4:+45286995 | None:intergenic |
ACTCACCAGGGTGGAGAACT+TGG | 0.397276 | 8.4:-45287174 | MS.gene046084:CDS |
TTCTTGCTAGTATGTGCAGC+AGG | 0.404863 | 8.4:-45297407 | MS.gene046084:CDS |
TTGTCAAGATGTTCTTCATT+GGG | 0.410507 | 8.4:-45287064 | MS.gene046084:CDS |
CTCAGTTGCGTCATCGTTCA+CGG | 0.413362 | 8.4:+45297583 | None:intergenic |
TGTTATTCTTCCTATACCTC+AGG | 0.425121 | 8.4:-45297120 | MS.gene046084:intron |
TTCTGTTGTTGTAGTGGCCA+TGG | 0.432620 | 8.4:+45297640 | None:intergenic |
AAGTTTGTTAAGCAAAGATA+TGG | 0.433332 | 8.4:-45290383 | MS.gene046084:CDS |
AAAATACGCAATCATGTTAA+GGG | 0.435079 | 8.4:+45294128 | None:intergenic |
AGAGATTACCGTTTCTCCCT+TGG | 0.437830 | 8.4:+45289076 | None:intergenic |
TCAACCCGTCTCTTAATACT+TGG | 0.438443 | 8.4:+45287954 | None:intergenic |
AACCATTCGGCCACCGCGGA+TGG | 0.438449 | 8.4:-45297203 | MS.gene046084:CDS |
TTGTTTAGATTTGGTGAGAC+AGG | 0.439170 | 8.4:-45289330 | MS.gene046084:intron |
TCATTAAGCCCCAGAAGATT+GGG | 0.447419 | 8.4:+45290227 | None:intergenic |
GCTCCATAATTGAAGTGATC+AGG | 0.448645 | 8.4:+45290307 | None:intergenic |
GAGCAAAGTGGGTGCAAGAA+TGG | 0.449100 | 8.4:-45297439 | MS.gene046084:CDS |
TGTCGTTTATAAGACCTAGA+AGG | 0.456991 | 8.4:-45287090 | MS.gene046084:CDS |
GTTTCAACATATGGATGAGC+TGG | 0.463529 | 8.4:-45289141 | MS.gene046084:CDS |
GAGCAATGTTATAAAGCAAA+TGG | 0.466994 | 8.4:-45290457 | MS.gene046084:CDS |
ACTTACATTTGCTAACCATT+CGG | 0.472710 | 8.4:-45297216 | MS.gene046084:CDS |
TGCATACTAAAATAGGCTGC+AGG | 0.474208 | 8.4:-45290529 | MS.gene046084:intron |
GGGTGCTGTGGCCATACAAT+TGG | 0.479594 | 8.4:-45287152 | MS.gene046084:CDS |
GTGGAGAACTTGGGGTGCTG+TGG | 0.480502 | 8.4:-45287164 | MS.gene046084:CDS |
ATGTGCAGCAGGGTTGTTTG+TGG | 0.481147 | 8.4:-45297396 | MS.gene046084:CDS |
AAGCAAAGATATGGCAAGAA+TGG | 0.481726 | 8.4:-45290374 | MS.gene046084:CDS |
TAACTATGAAAGACAACGTT+GGG | 0.483093 | 8.4:-45289432 | MS.gene046084:CDS |
CCTTCTCCATGCCAATTGTA+TGG | 0.485060 | 8.4:+45287141 | None:intergenic |
AACGTTGGGCTGCTATGCGT+GGG | 0.486010 | 8.4:-45289418 | MS.gene046084:CDS |
GGCCATCCGCGGTGGCCGAA+TGG | 0.486336 | 8.4:+45297201 | None:intergenic |
TCTGGGGCTTAATGACTCTC+AGG | 0.487909 | 8.4:-45290219 | MS.gene046084:intron |
ATTCCTTCTTTGTTGGAGCA+AGG | 0.491815 | 8.4:-45294291 | MS.gene046084:CDS |
CTTGTACTTCCATAATACAT+TGG | 0.494028 | 8.4:+45290403 | None:intergenic |
ACCAATCCGTTGTGCTCTCT+AGG | 0.496478 | 8.4:+45289830 | None:intergenic |
ATGGCAAGAATGGCATGGGC+AGG | 0.499094 | 8.4:-45290364 | MS.gene046084:CDS |
AACCAAGCGGCGGCCATCCG+CGG | 0.502864 | 8.4:+45297190 | None:intergenic |
CGAGGAAGAAGAGCAGCAAC+CGG | 0.504891 | 8.4:-45297516 | MS.gene046084:CDS |
TGTTATAAAGCAAATGGTTG+TGG | 0.505307 | 8.4:-45290451 | MS.gene046084:CDS |
GAAAGAGCATAGAAGAAAAG+TGG | 0.510624 | 8.4:+45297371 | None:intergenic |
CATCATCATCGACGTCGTCT+AGG | 0.516565 | 8.4:+45297540 | None:intergenic |
ACAAGTGTTGATGTTGATAG+TGG | 0.518429 | 8.4:+45287845 | None:intergenic |
AGCAACCGGTGAATTATAGA+AGG | 0.519221 | 8.4:-45297502 | MS.gene046084:CDS |
CAACGTTGGGCTGCTATGCG+TGG | 0.521277 | 8.4:-45289419 | MS.gene046084:CDS |
CGCAACTGAGGACAGTGAGC+CGG | 0.523356 | 8.4:-45297570 | MS.gene046084:CDS |
CTCACCAGGGTGGAGAACTT+GGG | 0.524503 | 8.4:-45287173 | MS.gene046084:CDS |
GAGAAAGAAGCATTTGCCGC+AGG | 0.525390 | 8.4:-45289474 | MS.gene046084:CDS |
TGCGTTTCGCCGTCTTGAAG+CGG | 0.528092 | 8.4:+45297243 | None:intergenic |
CAAATAGCATTCTTTGAACT+GGG | 0.528241 | 8.4:+45288002 | None:intergenic |
GTACACGTTTGTGAAGGAAA+AGG | 0.529854 | 8.4:-45287218 | MS.gene046084:CDS |
AAGAATGCTATTTGTAGTGA+GGG | 0.530072 | 8.4:-45287993 | MS.gene046084:CDS |
GTCTTGTTCTGTTGTTGTAG+TGG | 0.531812 | 8.4:+45297634 | None:intergenic |
AGAAGCAAGTGATGCAATTG+AGG | 0.532010 | 8.4:-45289520 | MS.gene046084:CDS |
GAACCTTGCTCCAACAAAGA+AGG | 0.532214 | 8.4:+45294288 | None:intergenic |
TCACCAAATCTAAACAAAGA+TGG | 0.533108 | 8.4:+45289336 | None:intergenic |
GATATTCACCAAGGGAGAAA+CGG | 0.543542 | 8.4:-45289084 | MS.gene046084:intron |
AATAGGCTGCAGGGGCATGT+TGG | 0.543827 | 8.4:-45290519 | MS.gene046084:intron |
AAAAGGTGAAGAGAAGTGCT+AGG | 0.545216 | 8.4:-45287201 | MS.gene046084:CDS |
ATTGACCTTCTATAATTCAC+CGG | 0.547123 | 8.4:+45297497 | None:intergenic |
TCATCAGATTGTGCTTTGGG+TGG | 0.548545 | 8.4:-45294316 | MS.gene046084:intron |
GTCTTCTCAAACACCATGAA+AGG | 0.551605 | 8.4:+45287885 | None:intergenic |
GGAGCAAGGTTCAGTTACAT+TGG | 0.555983 | 8.4:-45294277 | MS.gene046084:CDS |
GTCAAAGAAGAAGCCACGGC+GGG | 0.556746 | 8.4:+45297148 | None:intergenic |
GGGCATGTTGGTACTTATTG+GGG | 0.557619 | 8.4:-45290507 | MS.gene046084:CDS |
ACCTAGAGAGCACAACGGAT+TGG | 0.561226 | 8.4:-45289831 | MS.gene046084:CDS |
TATGTTGATTGGAAACATCA+AGG | 0.563307 | 8.4:-45289755 | MS.gene046084:intron |
AGAAAGAAGCATTTGCCGCA+GGG | 0.565082 | 8.4:-45289473 | MS.gene046084:CDS |
GCAGCCAAGTATTAAGAGAC+GGG | 0.565215 | 8.4:-45287958 | MS.gene046084:CDS |
ACACATACATGAATCACTGA+TGG | 0.566883 | 8.4:+45297349 | None:intergenic |
CCATACAATTGGCATGGAGA+AGG | 0.568101 | 8.4:-45287141 | MS.gene046084:CDS |
AAAGAATGCTATTTGTAGTG+AGG | 0.570255 | 8.4:-45287994 | MS.gene046084:CDS |
AGATATGGCAAGAATGGCAT+GGG | 0.580974 | 8.4:-45290368 | MS.gene046084:CDS |
GCATACTAAAATAGGCTGCA+GGG | 0.582067 | 8.4:-45290528 | MS.gene046084:intron |
AGCAGCCAAGTATTAAGAGA+CGG | 0.582144 | 8.4:-45287959 | MS.gene046084:CDS |
AAGATATGGCAAGAATGGCA+TGG | 0.584703 | 8.4:-45290369 | MS.gene046084:CDS |
TGTGGACCCAAGAGCAAAGT+GGG | 0.584915 | 8.4:-45297450 | MS.gene046084:CDS |
CATGGAGAAGGTACAGACAT+AGG | 0.585195 | 8.4:-45287129 | MS.gene046084:CDS |
AGTGCTAGGTATTACTCACC+AGG | 0.585592 | 8.4:-45287187 | MS.gene046084:CDS |
TGAGGATAAGAAATGTTGAA+TGG | 0.586161 | 8.4:-45289502 | MS.gene046084:CDS |
AGTGGAAGACGCTCTATGAA+AGG | 0.587352 | 8.4:+45287863 | None:intergenic |
CAAGCGGCGGCCATCCGCGG+TGG | 0.593262 | 8.4:+45297193 | None:intergenic |
TGGCAAGAATGGCATGGGCA+GGG | 0.594198 | 8.4:-45290363 | MS.gene046084:CDS |
TGTTAGGTACACGTTTGTGA+AGG | 0.596414 | 8.4:-45287224 | MS.gene046084:intron |
TATCTTCCTCCGCTTCAAGA+CGG | 0.596503 | 8.4:-45297252 | MS.gene046084:CDS |
AGTTGCTGCATGTTAGGACC+AGG | 0.599864 | 8.4:-45287929 | MS.gene046084:CDS |
ACGTCGTCTAGGTAGTTCTC+CGG | 0.603625 | 8.4:+45297551 | None:intergenic |
AGCAAGTATTAGTCGAGCTG+TGG | 0.605707 | 8.4:-45297468 | MS.gene046084:CDS |
TCATCCATATGTTGAAACAA+TGG | 0.605878 | 8.4:+45289146 | None:intergenic |
CTGTGGCCATACAATTGGCA+TGG | 0.607381 | 8.4:-45287147 | MS.gene046084:CDS |
AACATCATAATCTTGACGAG+TGG | 0.610549 | 8.4:-45289793 | MS.gene046084:CDS |
GGGCAGGGAATAGGGAAGCA+AGG | 0.613702 | 8.4:-45290348 | MS.gene046084:CDS |
TCACCAGGGTGGAGAACTTG+GGG | 0.614184 | 8.4:-45287172 | MS.gene046084:CDS |
CAATGAAGAACATCTTGACA+AGG | 0.615745 | 8.4:+45287066 | None:intergenic |
AGAGGTCAAAGAAGAAGCCA+CGG | 0.616489 | 8.4:+45297144 | None:intergenic |
GTTTCGCCGTCTTGAAGCGG+AGG | 0.624163 | 8.4:+45297246 | None:intergenic |
TCTTGCTAGTATGTGCAGCA+GGG | 0.627429 | 8.4:-45297406 | MS.gene046084:CDS |
ACATTGGCTTATGACAAGAA+AGG | 0.628779 | 8.4:+45290419 | None:intergenic |
AAGCAAGTGCAACCAAGCGG+CGG | 0.629489 | 8.4:+45297180 | None:intergenic |
CATACTAAAATAGGCTGCAG+GGG | 0.630612 | 8.4:-45290527 | MS.gene046084:intron |
GCAAAGCATCAGTCATGCAA+CGG | 0.631386 | 8.4:+45297285 | None:intergenic |
GGATAAGAAATGTTGAATGG+TGG | 0.633633 | 8.4:-45289499 | MS.gene046084:CDS |
TAGGACCAGGAAACTTCAGT+GGG | 0.639603 | 8.4:-45287916 | MS.gene046084:CDS |
ATGGTTCGCAGTCACTGTAA+CGG | 0.642051 | 8.4:-45297312 | MS.gene046084:CDS |
CTGTGGACCCAAGAGCAAAG+TGG | 0.642221 | 8.4:-45297451 | MS.gene046084:CDS |
GAAATCTCTGATATTCACCA+AGG | 0.643337 | 8.4:-45289093 | MS.gene046084:CDS |
TGAATATCAGAGATTTCACT+CGG | 0.646398 | 8.4:+45289099 | None:intergenic |
CGACGTCGATGATGATGACG+AGG | 0.651106 | 8.4:-45297534 | MS.gene046084:CDS |
ATACTGCAGATAGCAAGAGA+AGG | 0.654967 | 8.4:-45288028 | MS.gene046084:intron |
TGCTAACCATTCGGCCACCG+CGG | 0.655643 | 8.4:-45297207 | MS.gene046084:CDS |
AAATCTCTGATATTCACCAA+GGG | 0.657871 | 8.4:-45289092 | MS.gene046084:CDS |
CGTGAACGATGACGCAACTG+AGG | 0.660290 | 8.4:-45297582 | MS.gene046084:CDS |
TTAGGACCAGGAAACTTCAG+TGG | 0.671815 | 8.4:-45287917 | MS.gene046084:CDS |
GCACCCCAAGTTCTCCACCC+TGG | 0.673750 | 8.4:+45287169 | None:intergenic |
TGTCACACTTGAAACAACTG+AGG | 0.679826 | 8.4:-45287825 | MS.gene046084:CDS |
GCTTATCTTAAGTCCCGCCG+TGG | 0.688930 | 8.4:-45297161 | MS.gene046084:CDS |
AATGAAGAACATCTTGACAA+GGG | 0.692039 | 8.4:+45287067 | None:intergenic |
AGAATGCTATTTGTAGTGAG+GGG | 0.692304 | 8.4:-45287992 | MS.gene046084:CDS |
GATAAGCAAGTGCAACCAAG+CGG | 0.700417 | 8.4:+45297177 | None:intergenic |
GTAACTATGAAAGACAACGT+TGG | 0.705274 | 8.4:-45289433 | MS.gene046084:CDS |
GTATAGGAAGAATAACAAAG+AGG | 0.706312 | 8.4:+45297126 | None:intergenic |
GGTCAAAGAAGAAGCCACGG+CGG | 0.710952 | 8.4:+45297147 | None:intergenic |
ACGTTGGGCTGCTATGCGTG+GGG | 0.714184 | 8.4:-45289417 | MS.gene046084:CDS |
CGGAAACCTAGAGAGCACAA+CGG | 0.720733 | 8.4:-45289836 | MS.gene046084:CDS |
CTAGGTATTACTCACCAGGG+TGG | 0.743606 | 8.4:-45287183 | MS.gene046084:CDS |
GTGCTAGGTATTACTCACCA+GGG | 0.750633 | 8.4:-45287186 | MS.gene046084:CDS |
GTGCATGTATGAAGAACGTG+AGG | 0.755830 | 8.4:+45297610 | None:intergenic |
ACACGTTGTCGAAAACCCTG+CGG | 0.774495 | 8.4:+45289458 | None:intergenic |
AGGACCAGGAAACTTCAGTG+GGG | 0.801529 | 8.4:-45287915 | MS.gene046084:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 45286991 | 45297660 | 45286991 | ID=MS.gene046084 |
chr8.4 | mRNA | 45286991 | 45297660 | 45286991 | ID=MS.gene046084.t1;Parent=MS.gene046084 |
chr8.4 | exon | 45297121 | 45297660 | 45297121 | ID=MS.gene046084.t1.exon1;Parent=MS.gene046084.t1 |
chr8.4 | CDS | 45297121 | 45297660 | 45297121 | ID=cds.MS.gene046084.t1;Parent=MS.gene046084.t1 |
chr8.4 | exon | 45294116 | 45294331 | 45294116 | ID=MS.gene046084.t1.exon2;Parent=MS.gene046084.t1 |
chr8.4 | CDS | 45294116 | 45294331 | 45294116 | ID=cds.MS.gene046084.t1;Parent=MS.gene046084.t1 |
chr8.4 | exon | 45290220 | 45290536 | 45290220 | ID=MS.gene046084.t1.exon3;Parent=MS.gene046084.t1 |
chr8.4 | CDS | 45290220 | 45290536 | 45290220 | ID=cds.MS.gene046084.t1;Parent=MS.gene046084.t1 |
chr8.4 | exon | 45289756 | 45289864 | 45289756 | ID=MS.gene046084.t1.exon4;Parent=MS.gene046084.t1 |
chr8.4 | CDS | 45289756 | 45289864 | 45289756 | ID=cds.MS.gene046084.t1;Parent=MS.gene046084.t1 |
chr8.4 | exon | 45289331 | 45289567 | 45289331 | ID=MS.gene046084.t1.exon5;Parent=MS.gene046084.t1 |
chr8.4 | CDS | 45289331 | 45289567 | 45289331 | ID=cds.MS.gene046084.t1;Parent=MS.gene046084.t1 |
chr8.4 | exon | 45289085 | 45289171 | 45289085 | ID=MS.gene046084.t1.exon6;Parent=MS.gene046084.t1 |
chr8.4 | CDS | 45289085 | 45289171 | 45289085 | ID=cds.MS.gene046084.t1;Parent=MS.gene046084.t1 |
chr8.4 | exon | 45287776 | 45288041 | 45287776 | ID=MS.gene046084.t1.exon7;Parent=MS.gene046084.t1 |
chr8.4 | CDS | 45287776 | 45288041 | 45287776 | ID=cds.MS.gene046084.t1;Parent=MS.gene046084.t1 |
chr8.4 | exon | 45286991 | 45287240 | 45286991 | ID=MS.gene046084.t1.exon8;Parent=MS.gene046084.t1 |
chr8.4 | CDS | 45286991 | 45287240 | 45286991 | ID=cds.MS.gene046084.t1;Parent=MS.gene046084.t1 |
Gene Sequence |
Protein sequence |