Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047554.t1 | XP_003593527.1 | 97.7 | 655 | 15 | 0 | 1 | 655 | 1 | 655 | 0.00E+00 | 1275 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047554.t1 | P27819 | 78.6 | 659 | 130 | 3 | 1 | 655 | 1 | 652 | 4.9e-303 | 1041.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047554.t1 | A2Q4R2 | 97.7 | 655 | 15 | 0 | 1 | 655 | 1 | 655 | 0.0e+00 | 1275.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene047554 | MS.gene016758 | PPI |
MS.gene81615 | MS.gene047554 | PPI |
MS.gene047554 | MS.gene070511 | PPI |
MS.gene047554 | MS.gene070507 | PPI |
MS.gene016743 | MS.gene047554 | PPI |
MS.gene047554 | MS.gene057884 | PPI |
MS.gene047554 | MS.gene057883 | PPI |
MS.gene016742 | MS.gene047554 | PPI |
MS.gene047554 | MS.gene070492 | PPI |
MS.gene047554 | MS.gene070510 | PPI |
MS.gene81622 | MS.gene047554 | PPI |
MS.gene37911 | MS.gene047554 | PPI |
MS.gene047554 | MS.gene67840 | PPI |
MS.gene047554 | MS.gene81617 | PPI |
MS.gene070505 | MS.gene047554 | PPI |
MS.gene057886 | MS.gene047554 | PPI |
MS.gene070509 | MS.gene047554 | PPI |
MS.gene047554 | MS.gene070503 | PPI |
MS.gene047554 | MS.gene81620 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047554.t1 | MTR_2g013120 | 97.710 | 655 | 15 | 0 | 1 | 655 | 1 | 655 | 0.0 | 1323 |
MS.gene047554.t1 | MTR_3g099190 | 80.732 | 628 | 115 | 3 | 31 | 655 | 27 | 651 | 0.0 | 1065 |
MS.gene047554.t1 | MTR_2g027220 | 77.098 | 572 | 127 | 2 | 66 | 633 | 42 | 613 | 0.0 | 945 |
MS.gene047554.t1 | MTR_6g004200 | 24.644 | 491 | 330 | 11 | 84 | 550 | 6 | 480 | 7.23e-35 | 140 |
MS.gene047554.t1 | MTR_7g069540 | 23.034 | 534 | 361 | 16 | 63 | 574 | 28 | 533 | 1.05e-16 | 84.3 |
MS.gene047554.t1 | MTR_2g009330 | 21.722 | 511 | 334 | 17 | 96 | 574 | 64 | 540 | 2.18e-15 | 80.1 |
MS.gene047554.t1 | MTR_5g046610 | 22.325 | 542 | 377 | 17 | 52 | 574 | 19 | 535 | 3.29e-15 | 79.7 |
MS.gene047554.t1 | MTR_4g017200 | 22.325 | 542 | 377 | 17 | 52 | 574 | 19 | 535 | 4.54e-15 | 79.0 |
MS.gene047554.t1 | MTR_2g027200 | 50.000 | 62 | 12 | 1 | 555 | 616 | 1 | 43 | 5.53e-14 | 67.0 |
MS.gene047554.t1 | MTR_2g015560 | 21.942 | 515 | 340 | 17 | 88 | 572 | 26 | 508 | 1.01e-13 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene047554.t1 | AT3G48560 | 83.959 | 586 | 94 | 0 | 70 | 655 | 85 | 670 | 0.0 | 1047 |
MS.gene047554.t1 | AT5G17380 | 27.328 | 494 | 309 | 12 | 84 | 550 | 14 | 484 | 1.02e-46 | 174 |
MS.gene047554.t1 | AT5G01330 | 24.237 | 524 | 321 | 17 | 88 | 574 | 36 | 520 | 1.58e-19 | 93.2 |
MS.gene047554.t1 | AT5G01320 | 22.562 | 523 | 331 | 15 | 88 | 574 | 47 | 531 | 1.88e-17 | 86.7 |
MS.gene047554.t1 | AT4G33070 | 22.328 | 524 | 331 | 15 | 88 | 574 | 51 | 535 | 2.85e-16 | 83.2 |
MS.gene047554.t1 | AT5G54960 | 22.180 | 532 | 366 | 16 | 61 | 572 | 30 | 533 | 8.92e-16 | 81.3 |
Find 214 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGGGGATCAATCGAATTT+TGG | 0.232600 | 2.1:-71567974 | MS.gene047554:CDS |
CCCAATATGTTGAAGTTTGC+AGG | 0.240705 | 2.1:-71567436 | MS.gene047554:CDS |
GATCAACCTATTAGGTTAAC+TGG | 0.252439 | 2.1:-71568429 | MS.gene047554:CDS |
AATATTTCTTTCTCATTGGC+TGG | 0.252481 | 2.1:+71567460 | None:intergenic |
TTCAACAACAATATCTTAAC+AGG | 0.266547 | 2.1:+71567562 | None:intergenic |
GTGTTTGGGGAAGTGGAAAA+TGG | 0.269439 | 2.1:+71569086 | None:intergenic |
CGCTATGGGATTTGGATTGC+CGG | 0.275397 | 2.1:-71567698 | MS.gene047554:CDS |
ACCTGCAAACTTCAACATAT+TGG | 0.275568 | 2.1:+71567435 | None:intergenic |
CGAATTGGGATCAACCTATT+AGG | 0.276452 | 2.1:-71568437 | MS.gene047554:CDS |
ACAGATTGTGAGGTTGTTAT+TGG | 0.278604 | 2.1:-71568361 | MS.gene047554:CDS |
GGTCTTGGCGCTATGGGATT+TGG | 0.283365 | 2.1:-71567706 | MS.gene047554:CDS |
AGGTTTGATGATCGGGTTAC+TGG | 0.289362 | 2.1:-71568114 | MS.gene047554:CDS |
TTGAGTTTGAAGGGAGTGTT+TGG | 0.289702 | 2.1:+71569071 | None:intergenic |
CCTGCAAACTTCAACATATT+GGG | 0.314608 | 2.1:+71567436 | None:intergenic |
CAGGTAGGTGTGAGCTCTAT+TGG | 0.318135 | 2.1:+71567489 | None:intergenic |
TGCTAGTACTTTGATGGGGT+TGG | 0.322703 | 2.1:-71568247 | MS.gene047554:CDS |
AACAGGTTTCTGTTCCGAAT+TGG | 0.337313 | 2.1:-71568452 | MS.gene047554:CDS |
TGTTCCAAATGTGCCTCTTT+CGG | 0.341709 | 2.1:+71568381 | None:intergenic |
ATATACCCAGTTAACCTAAT+AGG | 0.345011 | 2.1:+71568423 | None:intergenic |
ATTTGGATTGCCGGCTGCCA+TGG | 0.358680 | 2.1:-71567689 | MS.gene047554:CDS |
GGGGAATATTTCTTTCTCAT+TGG | 0.363131 | 2.1:+71567456 | None:intergenic |
GAAGGGAGTGTTTGGGGAAG+TGG | 0.366408 | 2.1:+71569079 | None:intergenic |
GGCACCGAAAGAGGCACATT+TGG | 0.369187 | 2.1:-71568385 | MS.gene047554:CDS |
GATCCATTTGCAGGAATCAT+TGG | 0.370032 | 2.1:+71567286 | None:intergenic |
TGATTCTGAAAACGTGGTTT+TGG | 0.372112 | 2.1:+71569114 | None:intergenic |
GGATTTGAAGTTGGCTTTGA+AGG | 0.374802 | 2.1:-71567992 | MS.gene047554:CDS |
ACCTGTTGCTAGTACTTTGA+TGG | 0.375227 | 2.1:-71568253 | MS.gene047554:CDS |
CAGCCTCATGTGTCGGTTTG+TGG | 0.375821 | 2.1:-71568015 | MS.gene047554:CDS |
AAGCTTTATGATGAATGTTC+AGG | 0.379274 | 2.1:-71567614 | MS.gene047554:CDS |
ACAGGTTTCTGTTCCGAATT+GGG | 0.386257 | 2.1:-71568451 | MS.gene047554:CDS |
TCCTCAAAGGATCCATTTGC+AGG | 0.389166 | 2.1:+71567277 | None:intergenic |
ATGTGCCTCTTTCGGTGCCT+TGG | 0.389362 | 2.1:+71568389 | None:intergenic |
ACCTAAGGATATTCAGCAAC+AGG | 0.392227 | 2.1:-71568469 | MS.gene047554:CDS |
GGTTAACTGGGTATATGAAT+AGG | 0.392870 | 2.1:-71568416 | MS.gene047554:CDS |
TTCTGCTGGTCTTGGCGCTA+TGG | 0.393331 | 2.1:-71567713 | MS.gene047554:CDS |
ACAGCAGCTCCCATGGCAGC+CGG | 0.395329 | 2.1:+71567679 | None:intergenic |
GATATTGATGCTGCTGAGAT+TGG | 0.396931 | 2.1:-71568048 | MS.gene047554:CDS |
TGGGGTTAGGTTTGATGATC+GGG | 0.402613 | 2.1:-71568121 | MS.gene047554:CDS |
GGTGTCTGCATCGCCACTTC+CGG | 0.403895 | 2.1:-71568747 | MS.gene047554:CDS |
AGAGCGGTGGTTGAGTTTGA+AGG | 0.403984 | 2.1:+71569061 | None:intergenic |
GGGTTCGTTAGGGGCAAATC+GGG | 0.405793 | 2.1:+71568965 | None:intergenic |
GCTAGTACTTTGATGGGGTT+GGG | 0.408704 | 2.1:-71568246 | MS.gene047554:CDS |
GCTCGTTCCTCCGGTTTCCC+TGG | 0.409653 | 2.1:-71568768 | MS.gene047554:CDS |
TGGTTGACTTCTGCTGGTCT+TGG | 0.411154 | 2.1:-71567721 | MS.gene047554:CDS |
ATAGAGAGTAAGCTTGATTT+CGG | 0.412100 | 2.1:-71567940 | MS.gene047554:CDS |
GAGAATTCGTTGCAGATGCT+TGG | 0.413491 | 2.1:-71568204 | MS.gene047554:CDS |
AACTGAATGATCAGAAAGTT+AGG | 0.416856 | 2.1:-71567903 | MS.gene047554:CDS |
AGCCTCATGTGTCGGTTTGT+GGG | 0.418936 | 2.1:-71568014 | MS.gene047554:CDS |
TTGGGGTTAGGTTTGATGAT+CGG | 0.419793 | 2.1:-71568122 | MS.gene047554:CDS |
TGTGCCTCTTTCGGTGCCTT+GGG | 0.420636 | 2.1:+71568390 | None:intergenic |
AGGCGGTTTGTTGAGTTAAC+CGG | 0.420654 | 2.1:-71568279 | MS.gene047554:CDS |
GATGCAGACACCAGGGAAAC+CGG | 0.423544 | 2.1:+71568758 | None:intergenic |
GGGGTTCGTTAGGGGCAAAT+CGG | 0.423916 | 2.1:+71568964 | None:intergenic |
TCCTCCGCAGTATGCTATAC+AGG | 0.426227 | 2.1:-71567845 | MS.gene047554:CDS |
TGCATCGCCACTTCCGGCCC+AGG | 0.426512 | 2.1:-71568741 | MS.gene047554:CDS |
CGTCGAAGCACTTGAACGTC+AGG | 0.428461 | 2.1:-71568922 | MS.gene047554:CDS |
ATTTCCATTGAAGCGCCGCC+AGG | 0.431656 | 2.1:+71568876 | None:intergenic |
TGAGTTTGAAGGGAGTGTTT+GGG | 0.434798 | 2.1:+71569072 | None:intergenic |
CCATCACCGGTCAGGTTCCC+CGG | 0.439113 | 2.1:-71568659 | MS.gene047554:CDS |
TCTGCTGGTCTTGGCGCTAT+GGG | 0.442287 | 2.1:-71567712 | MS.gene047554:CDS |
CAATAGAGCTCACACCTACC+TGG | 0.446335 | 2.1:-71567488 | MS.gene047554:CDS |
TTTGGATTGCCGGCTGCCAT+GGG | 0.447144 | 2.1:-71567688 | MS.gene047554:CDS |
GATTTGAAGTTGGCTTTGAA+GGG | 0.448952 | 2.1:-71567991 | MS.gene047554:CDS |
GCTTATTGCCATCACCGGTC+AGG | 0.450703 | 2.1:-71568667 | MS.gene047554:CDS |
TCTCATTGGCTGGGTCTCCC+AGG | 0.453592 | 2.1:+71567470 | None:intergenic |
CCTGTTGCTAGTACTTTGAT+GGG | 0.454512 | 2.1:-71568252 | MS.gene047554:CDS |
GTTGGGTTCCTATCCTAGTT+CGG | 0.456275 | 2.1:-71568229 | MS.gene047554:CDS |
TGTTTGGGGAAGTGGAAAAT+GGG | 0.456756 | 2.1:+71569087 | None:intergenic |
TGCAGGTGCTTGTGGTATAC+CGG | 0.457670 | 2.1:-71567419 | MS.gene047554:CDS |
CATCAAGAAGGTAGGGGCCA+GGG | 0.457929 | 2.1:+71567338 | None:intergenic |
ACATCAAGAAGGTAGGGGCC+AGG | 0.461753 | 2.1:+71567337 | None:intergenic |
CATCAGTACCAATCATTCTC+CGG | 0.464538 | 2.1:+71568640 | None:intergenic |
TATGATGAATGTTCAGGAGT+TGG | 0.465434 | 2.1:-71567608 | MS.gene047554:CDS |
CAGGTTCCCCGGAGAATGAT+TGG | 0.466447 | 2.1:-71568648 | MS.gene047554:CDS |
ATCAGTACCAATCATTCTCC+GGG | 0.467400 | 2.1:+71568641 | None:intergenic |
CCGGGGAACCTGACCGGTGA+TGG | 0.468521 | 2.1:+71568659 | None:intergenic |
TTAGGTATATCGATCAAAAC+AGG | 0.472536 | 2.1:+71568486 | None:intergenic |
AGTAGGGTTGGAGATGGAAG+CGG | 0.473325 | 2.1:+71569028 | None:intergenic |
TTGCAGATGCTTGGGATGCA+TGG | 0.475365 | 2.1:-71568195 | MS.gene047554:CDS |
CCCATCAAAGTACTAGCAAC+AGG | 0.475566 | 2.1:+71568252 | None:intergenic |
TTACCCTGGCGGCGCTTCAA+TGG | 0.476078 | 2.1:-71568880 | MS.gene047554:CDS |
AACCACAATAGCGTCGGGAT+TGG | 0.482109 | 2.1:+71567654 | None:intergenic |
GTAAGCTTGATTTCGGAGGT+TGG | 0.484920 | 2.1:-71567933 | MS.gene047554:CDS |
GAGGGTTACGCTCGTTCCTC+CGG | 0.485552 | 2.1:-71568777 | MS.gene047554:CDS |
AGGCAGTGGTTGACTTCTGC+TGG | 0.485926 | 2.1:-71567727 | MS.gene047554:CDS |
CTAATAGGTTGATCCCAATT+CGG | 0.489964 | 2.1:+71568438 | None:intergenic |
TTCTTGACGAGCTTACCAAT+GGG | 0.490237 | 2.1:-71567822 | MS.gene047554:CDS |
TTGCCAATGATTCCTGCAAA+TGG | 0.490698 | 2.1:-71567289 | MS.gene047554:CDS |
ATATTTCTTTCTCATTGGCT+GGG | 0.491931 | 2.1:+71567461 | None:intergenic |
CTCTTTGTCACACGAGCTGC+CGG | 0.502154 | 2.1:+71567400 | None:intergenic |
CCACCACCAACATACAAAAC+AGG | 0.502296 | 2.1:+71568327 | None:intergenic |
AGTAGCACCTGGGCCGGAAG+TGG | 0.502445 | 2.1:+71568734 | None:intergenic |
TCCTGCAAATGGATCCTTTG+AGG | 0.504950 | 2.1:-71567278 | MS.gene047554:CDS |
AGAATTCGTTGCAGATGCTT+GGG | 0.506752 | 2.1:-71568203 | MS.gene047554:CDS |
GAAGTGGCGATGCAGACACC+AGG | 0.511122 | 2.1:+71568750 | None:intergenic |
GGTTTGTGGGGATTTGAAGT+TGG | 0.511799 | 2.1:-71568001 | MS.gene047554:CDS |
ACCTGTTGCTGAATATCCTT+AGG | 0.511983 | 2.1:+71568468 | None:intergenic |
GCCCCTAACGAACCCCGAAA+AGG | 0.516458 | 2.1:-71568957 | MS.gene047554:CDS |
GATCTAGTTACCTCAACAAT+CGG | 0.519783 | 2.1:+71568603 | None:intergenic |
TGAATTGTAGCGAGGAATTG+AGG | 0.520671 | 2.1:-71568299 | MS.gene047554:CDS |
TCAAACTTCTTATAACTCAT+CGG | 0.521295 | 2.1:+71567877 | None:intergenic |
ATATTGATGCTGCTGAGATT+GGG | 0.522267 | 2.1:-71568047 | MS.gene047554:CDS |
ATTGGCAACAGCAGCTCCCA+TGG | 0.524757 | 2.1:+71567672 | None:intergenic |
GAGCGGTGGTTGAGTTTGAA+GGG | 0.528109 | 2.1:+71569062 | None:intergenic |
TCAGGAGTTGGCTACTATCA+AGG | 0.529463 | 2.1:-71567596 | MS.gene047554:CDS |
CATTCTCCGGGGAACCTGAC+CGG | 0.531322 | 2.1:+71568653 | None:intergenic |
GTTCTTGACGAGCTTACCAA+TGG | 0.533777 | 2.1:-71567823 | MS.gene047554:CDS |
GGGGAGGCTATCATAAGTAC+TGG | 0.534253 | 2.1:-71567802 | MS.gene047554:CDS |
GCCTCATGTGTCGGTTTGTG+GGG | 0.534297 | 2.1:-71568013 | MS.gene047554:CDS |
AACGCTTCATTCACTATCCT+AGG | 0.535019 | 2.1:+71568537 | None:intergenic |
CTGACGAGATTAGTAGCACC+TGG | 0.538331 | 2.1:+71568723 | None:intergenic |
ATTGGCTGGGTCTCCCAGGT+AGG | 0.539147 | 2.1:+71567474 | None:intergenic |
TTGAAGTTTGCAGGTGCTTG+TGG | 0.539914 | 2.1:-71567427 | MS.gene047554:CDS |
ACAAATGTCTTCGCTTACCC+TGG | 0.542915 | 2.1:-71568894 | MS.gene047554:CDS |
ATCAAGAAGGTAGGGGCCAG+GGG | 0.543925 | 2.1:+71567339 | None:intergenic |
ACAATGACATCAAGAAGGTA+GGG | 0.544765 | 2.1:+71567331 | None:intergenic |
ATATCGATCAAAACAGGTCC+AGG | 0.546128 | 2.1:+71568492 | None:intergenic |
TCAAGAAACTCCGATTGTTG+AGG | 0.547823 | 2.1:-71568613 | MS.gene047554:CDS |
CTTGGGTATGGTTGTCCAGT+GGG | 0.549540 | 2.1:-71567530 | MS.gene047554:CDS |
GTTGTTGAACAATCAACACT+TGG | 0.549760 | 2.1:-71567548 | MS.gene047554:CDS |
GTTACCCAAGGCACCGAAAG+AGG | 0.549898 | 2.1:-71568394 | MS.gene047554:CDS |
ATGTCAACCACAATAGCGTC+GGG | 0.553806 | 2.1:+71567649 | None:intergenic |
ATTCTCATCCGAACTAGGAT+AGG | 0.554840 | 2.1:+71568221 | None:intergenic |
CACATTTGGAACAGATTGTG+AGG | 0.555893 | 2.1:-71568371 | MS.gene047554:CDS |
AACGAATTCTCATCCGAACT+AGG | 0.556901 | 2.1:+71568216 | None:intergenic |
GTTCCGCTTATTGCCATCAC+CGG | 0.557256 | 2.1:-71568672 | MS.gene047554:CDS |
GAGATTAGTAGCACCTGGGC+CGG | 0.558857 | 2.1:+71568728 | None:intergenic |
AAGAACAAGATAATTATGCT+TGG | 0.559558 | 2.1:+71568575 | None:intergenic |
GGTACAAGAGACCGAGGCAG+TGG | 0.562380 | 2.1:-71567741 | MS.gene047554:CDS |
TGCAGATGCTTGGGATGCAT+GGG | 0.563717 | 2.1:-71568194 | MS.gene047554:CDS |
GAGGACGTTACGAATGGCGG+TGG | 0.567894 | 2.1:+71568833 | None:intergenic |
GCAGAAGTCAACCACTGCCT+CGG | 0.568184 | 2.1:+71567730 | None:intergenic |
CAGAAAATGTTAGATACCCC+TGG | 0.568513 | 2.1:-71567355 | MS.gene047554:CDS |
ATTTGAAGTTGGCTTTGAAG+GGG | 0.570043 | 2.1:-71567990 | MS.gene047554:CDS |
CAATATGAACAATCTTCGCC+CGG | 0.571633 | 2.1:+71568070 | None:intergenic |
ACTTATCCTGCCATCACCCT+CGG | 0.572531 | 2.1:+71567246 | None:intergenic |
TACAATGACATCAAGAAGGT+AGG | 0.574462 | 2.1:+71567330 | None:intergenic |
TCATAACCGAGGGTGATGGC+AGG | 0.574956 | 2.1:-71567252 | MS.gene047554:CDS |
TGGTTGTCCAGTGGGAGGAT+CGG | 0.577376 | 2.1:-71567522 | MS.gene047554:CDS |
GAGTTTGAAGGGAGTGTTTG+GGG | 0.580053 | 2.1:+71569073 | None:intergenic |
GAACAATCAACACTTGGGTA+TGG | 0.580544 | 2.1:-71567542 | MS.gene047554:CDS |
CGGGAAATGAATTGTTCATG+TGG | 0.582959 | 2.1:+71568984 | None:intergenic |
TATAGAACCGATCCTCCCAC+TGG | 0.583559 | 2.1:+71567515 | None:intergenic |
TTAGCTTCTAGTGGTAGACC+TGG | 0.583844 | 2.1:-71568510 | MS.gene047554:CDS |
CTCGGTTATGACATCCTCAA+AGG | 0.584779 | 2.1:+71567264 | None:intergenic |
GGGTATGGTTGTCCAGTGGG+AGG | 0.585047 | 2.1:-71567527 | MS.gene047554:CDS |
CGGCAGCTCGTGTGACAAAG+AGG | 0.586144 | 2.1:-71567399 | MS.gene047554:CDS |
AGGTGGAATATTCGCTGCCG+AGG | 0.587958 | 2.1:-71568796 | MS.gene047554:CDS |
TTCCACCTTGTTCGTGACGA+GGG | 0.588122 | 2.1:+71568811 | None:intergenic |
GGTTTGATGATCGGGTTACT+GGG | 0.588175 | 2.1:-71568113 | MS.gene047554:CDS |
GAGAGTAAGCTTGATTTCGG+AGG | 0.590245 | 2.1:-71567937 | MS.gene047554:CDS |
TTGTTGAACAATCAACACTT+GGG | 0.590968 | 2.1:-71567547 | MS.gene047554:CDS |
GCTATCATAAGTACTGGTGT+TGG | 0.593538 | 2.1:-71567796 | MS.gene047554:CDS |
GGGAAATGAATTGTTCATGT+GGG | 0.594371 | 2.1:+71568985 | None:intergenic |
ATCAACCTATTAGGTTAACT+GGG | 0.594575 | 2.1:-71568428 | MS.gene047554:CDS |
GTCCTCCCTCGTCACGAACA+AGG | 0.595803 | 2.1:-71568816 | MS.gene047554:CDS |
GATGTCATAACCGAGGGTGA+TGG | 0.596424 | 2.1:-71567256 | MS.gene047554:CDS |
CTGCAAACTTCAACATATTG+GGG | 0.597132 | 2.1:+71567437 | None:intergenic |
TGCCAATCCCGACGCTATTG+TGG | 0.597385 | 2.1:-71567656 | MS.gene047554:CDS |
ACTTATGATAGCCTCCCCAT+TGG | 0.598564 | 2.1:+71567807 | None:intergenic |
ATTCCACCTTGTTCGTGACG+AGG | 0.598895 | 2.1:+71568810 | None:intergenic |
AATAGAGCTCACACCTACCT+GGG | 0.601839 | 2.1:-71567487 | MS.gene047554:CDS |
AGAGATGGTGGTCGTGAACG+CGG | 0.602156 | 2.1:+71569163 | None:intergenic |
TCGGGTTACTGGGAAGCTTG+AGG | 0.605782 | 2.1:-71568103 | MS.gene047554:CDS |
CTGTTGCTAGTACTTTGATG+GGG | 0.606374 | 2.1:-71568251 | MS.gene047554:CDS |
GTGGTTGACATCGATGGTGA+TGG | 0.607155 | 2.1:-71567637 | MS.gene047554:CDS |
GGCAGCTCGTGTGACAAAGA+GGG | 0.609397 | 2.1:-71567398 | MS.gene047554:CDS |
GAATAAGCAGCCTCATGTGT+CGG | 0.610801 | 2.1:-71568022 | MS.gene047554:CDS |
TTTCCATTGAAGCGCCGCCA+GGG | 0.615322 | 2.1:+71568877 | None:intergenic |
TTGATGTTGATGATATACCT+AGG | 0.619737 | 2.1:-71568554 | MS.gene047554:CDS |
TTTGAGGATGTCATAACCGA+GGG | 0.621237 | 2.1:-71567262 | MS.gene047554:CDS |
ACGAGGGAGGACGTTACGAA+TGG | 0.622770 | 2.1:+71568827 | None:intergenic |
GATGTCAACCACAATAGCGT+CGG | 0.624097 | 2.1:+71567648 | None:intergenic |
GGTGGAATATTCGCTGCCGA+GGG | 0.624227 | 2.1:-71568795 | MS.gene047554:CDS |
AAATGAATTGTTCATGTGGG+GGG | 0.627111 | 2.1:+71568988 | None:intergenic |
TTGTGGTGAAGATGAAGAGA+TGG | 0.630262 | 2.1:+71569148 | None:intergenic |
CAATGACATCAAGAAGGTAG+GGG | 0.631239 | 2.1:+71567332 | None:intergenic |
GGCAACACATGCTCTTGATG+CGG | 0.634193 | 2.1:+71567307 | None:intergenic |
TGACGAGCTTACCAATGGGG+AGG | 0.634568 | 2.1:-71567818 | MS.gene047554:CDS |
GACTGTTTATGCTAATTATG+CGG | 0.636569 | 2.1:-71568172 | MS.gene047554:CDS |
GAAATGAATTGTTCATGTGG+GGG | 0.638104 | 2.1:+71568987 | None:intergenic |
GGAAATGAATTGTTCATGTG+GGG | 0.638369 | 2.1:+71568986 | None:intergenic |
CACCTTGTTCGTGACGAGGG+AGG | 0.638696 | 2.1:+71568814 | None:intergenic |
TTTATAGGTACAAGAGACCG+AGG | 0.639559 | 2.1:-71567747 | MS.gene047554:CDS |
GGAGGAACGAGCGTAACCCT+CGG | 0.640818 | 2.1:+71568779 | None:intergenic |
TGGTGAAGATGAAGAGATGG+TGG | 0.641124 | 2.1:+71569151 | None:intergenic |
GTGTTGGACAACATCAGATG+TGG | 0.643554 | 2.1:-71567780 | MS.gene047554:CDS |
TGGTAGTTTGAATTGTAGCG+AGG | 0.644126 | 2.1:-71568307 | MS.gene047554:CDS |
AGTACTAGCAACAGGTACAC+CGG | 0.645359 | 2.1:+71568260 | None:intergenic |
GCGGTACAATGACATCAAGA+AGG | 0.647744 | 2.1:+71567326 | None:intergenic |
GCTATTGTGGTTGACATCGA+TGG | 0.649650 | 2.1:-71567643 | MS.gene047554:CDS |
ACTTGGGTATGGTTGTCCAG+TGG | 0.649969 | 2.1:-71567531 | MS.gene047554:CDS |
GGTAAGTGATTCTGAAAACG+TGG | 0.650896 | 2.1:+71569108 | None:intergenic |
GTCGAAGCACTTGAACGTCA+GGG | 0.655319 | 2.1:-71568921 | MS.gene047554:CDS |
AGGGAGGACGTTACGAATGG+CGG | 0.657905 | 2.1:+71568830 | None:intergenic |
TGACCGGTGATGGCAATAAG+CGG | 0.658648 | 2.1:+71568669 | None:intergenic |
TCCCCACAAACCGACACATG+AGG | 0.664573 | 2.1:+71568012 | None:intergenic |
GGTGCTACTAATCTCGTCAG+TGG | 0.668110 | 2.1:-71568720 | MS.gene047554:CDS |
ACCTGTATAGCATACTGCGG+AGG | 0.674124 | 2.1:+71567844 | None:intergenic |
CTTTGAGGATGTCATAACCG+AGG | 0.677141 | 2.1:-71567263 | MS.gene047554:CDS |
GTATATGAATAGGTTACCCA+AGG | 0.677418 | 2.1:-71568406 | MS.gene047554:CDS |
GACGTTCAAGTGCTTCGACG+AGG | 0.680089 | 2.1:+71568925 | None:intergenic |
TGTTGGACAACATCAGATGT+GGG | 0.692591 | 2.1:-71567779 | MS.gene047554:CDS |
AAGTGGCGATGCAGACACCA+GGG | 0.695335 | 2.1:+71568751 | None:intergenic |
AATGTCTTCGCTTACCCTGG+CGG | 0.697805 | 2.1:-71568891 | MS.gene047554:CDS |
TCTTGACGAGCTTACCAATG+GGG | 0.698334 | 2.1:-71567821 | MS.gene047554:CDS |
TCAACAACAATATCTTAACA+GGG | 0.698879 | 2.1:+71567563 | None:intergenic |
GCAGACACCAGGGAAACCGG+AGG | 0.699497 | 2.1:+71568761 | None:intergenic |
CTCCCTCGTCACGAACAAGG+TGG | 0.705691 | 2.1:-71568813 | MS.gene047554:CDS |
TGACGAGATTAGTAGCACCT+GGG | 0.711329 | 2.1:+71568724 | None:intergenic |
GGAGTTGGCTACTATCAAGG+TGG | 0.721822 | 2.1:-71567593 | MS.gene047554:CDS |
AGAACCTGTATAGCATACTG+CGG | 0.744810 | 2.1:+71567841 | None:intergenic |
TCAGTACCAATCATTCTCCG+GGG | 0.748029 | 2.1:+71568642 | None:intergenic |
ATTGTAGCGAGGAATTGAGG+CGG | 0.749278 | 2.1:-71568296 | MS.gene047554:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AAGAACAAGATAATTATGCT+TGG | + | chr2.1:71567853-71567872 | None:intergenic | 25.0% |
! | TCAAACTTCTTATAACTCAT+CGG | + | chr2.1:71568551-71568570 | None:intergenic | 25.0% |
! | TCAACAACAATATCTTAACA+GGG | + | chr2.1:71568865-71568884 | None:intergenic | 25.0% |
! | TTCAACAACAATATCTTAAC+AGG | + | chr2.1:71568866-71568885 | None:intergenic | 25.0% |
AACTGAATGATCAGAAAGTT+AGG | - | chr2.1:71568522-71568541 | MS.gene047554:CDS | 30.0% | |
AATATTTCTTTCTCATTGGC+TGG | + | chr2.1:71568968-71568987 | None:intergenic | 30.0% | |
ATAGAGAGTAAGCTTGATTT+CGG | - | chr2.1:71568485-71568504 | MS.gene047554:CDS | 30.0% | |
ATATACCCAGTTAACCTAAT+AGG | + | chr2.1:71568005-71568024 | None:intergenic | 30.0% | |
ATCAACCTATTAGGTTAACT+GGG | - | chr2.1:71567997-71568016 | MS.gene047554:CDS | 30.0% | |
GACTGTTTATGCTAATTATG+CGG | - | chr2.1:71568253-71568272 | MS.gene047554:CDS | 30.0% | |
TTAGGTATATCGATCAAAAC+AGG | + | chr2.1:71567942-71567961 | None:intergenic | 30.0% | |
TTGTTGAACAATCAACACTT+GGG | - | chr2.1:71568878-71568897 | MS.gene047554:CDS | 30.0% | |
! | AAGAAACCTGTTTTGTATGT+TGG | - | chr2.1:71568092-71568111 | MS.gene047554:CDS | 30.0% |
! | AAGCTTTATGATGAATGTTC+AGG | - | chr2.1:71568811-71568830 | MS.gene047554:CDS | 30.0% |
! | ATATTTCTTTCTCATTGGCT+GGG | + | chr2.1:71568967-71568986 | None:intergenic | 30.0% |
!! | AATCGAATTTTGGAGAGTAA+TGG | - | chr2.1:71568461-71568480 | MS.gene047554:CDS | 30.0% |
!! | ATCGAATTTTGGAGAGTAAT+GGG | - | chr2.1:71568462-71568481 | MS.gene047554:CDS | 30.0% |
!! | TTGATGTTGATGATATACCT+AGG | - | chr2.1:71567871-71567890 | MS.gene047554:CDS | 30.0% |
!!! | TGTTTTGATCGATATACCTA+AGG | - | chr2.1:71567941-71567960 | MS.gene047554:CDS | 30.0% |
AAATGAATTGTTCATGTGGG+GGG | + | chr2.1:71567440-71567459 | None:intergenic | 35.0% | |
ACAATGACATCAAGAAGGTA+GGG | + | chr2.1:71569097-71569116 | None:intergenic | 35.0% | |
ACAGATTGTGAGGTTGTTAT+TGG | - | chr2.1:71568064-71568083 | MS.gene047554:CDS | 35.0% | |
ACCTGCAAACTTCAACATAT+TGG | + | chr2.1:71568993-71569012 | None:intergenic | 35.0% | |
ATATTGATGCTGCTGAGATT+GGG | - | chr2.1:71568378-71568397 | MS.gene047554:CDS | 35.0% | |
CCTGCAAACTTCAACATATT+GGG | + | chr2.1:71568992-71569011 | None:intergenic | 35.0% | |
CTGCAAACTTCAACATATTG+GGG | + | chr2.1:71568991-71569010 | None:intergenic | 35.0% | |
GAAATGAATTGTTCATGTGG+GGG | + | chr2.1:71567441-71567460 | None:intergenic | 35.0% | |
GATCAACCTATTAGGTTAAC+TGG | - | chr2.1:71567996-71568015 | MS.gene047554:CDS | 35.0% | |
GATCTAGTTACCTCAACAAT+CGG | + | chr2.1:71567825-71567844 | None:intergenic | 35.0% | |
GGAAATGAATTGTTCATGTG+GGG | + | chr2.1:71567442-71567461 | None:intergenic | 35.0% | |
GGGAAATGAATTGTTCATGT+GGG | + | chr2.1:71567443-71567462 | None:intergenic | 35.0% | |
GGGGAATATTTCTTTCTCAT+TGG | + | chr2.1:71568972-71568991 | None:intergenic | 35.0% | |
GGTTAACTGGGTATATGAAT+AGG | - | chr2.1:71568009-71568028 | MS.gene047554:CDS | 35.0% | |
GTATATGAATAGGTTACCCA+AGG | - | chr2.1:71568019-71568038 | MS.gene047554:CDS | 35.0% | |
GTTGTTGAACAATCAACACT+TGG | - | chr2.1:71568877-71568896 | MS.gene047554:CDS | 35.0% | |
TACAATGACATCAAGAAGGT+AGG | + | chr2.1:71569098-71569117 | None:intergenic | 35.0% | |
TATGATGAATGTTCAGGAGT+TGG | - | chr2.1:71568817-71568836 | MS.gene047554:CDS | 35.0% | |
! | AAACCTGTTTTGTATGTTGG+TGG | - | chr2.1:71568095-71568114 | MS.gene047554:CDS | 35.0% |
!! | ATTTGAAGTTGGCTTTGAAG+GGG | - | chr2.1:71568435-71568454 | MS.gene047554:CDS | 35.0% |
!! | CTAATAGGTTGATCCCAATT+CGG | + | chr2.1:71567990-71568009 | None:intergenic | 35.0% |
!! | GATTTGAAGTTGGCTTTGAA+GGG | - | chr2.1:71568434-71568453 | MS.gene047554:CDS | 35.0% |
!! | GCGTTTTTATTAGCTTCTAG+TGG | - | chr2.1:71567906-71567925 | MS.gene047554:CDS | 35.0% |
!! | TGATTCTGAAAACGTGGTTT+TGG | + | chr2.1:71567314-71567333 | None:intergenic | 35.0% |
!!! | TTTTGGTTTGGAAGTGATTG+TGG | + | chr2.1:71567297-71567316 | None:intergenic | 35.0% |
AACAGGTTTCTGTTCCGAAT+TGG | - | chr2.1:71567973-71567992 | MS.gene047554:CDS | 40.0% | |
AACGAATTCTCATCCGAACT+AGG | + | chr2.1:71568212-71568231 | None:intergenic | 40.0% | |
AACGCTTCATTCACTATCCT+AGG | + | chr2.1:71567891-71567910 | None:intergenic | 40.0% | |
ACAGGTTTCTGTTCCGAATT+GGG | - | chr2.1:71567974-71567993 | MS.gene047554:CDS | 40.0% | |
ACCTAAGGATATTCAGCAAC+AGG | - | chr2.1:71567956-71567975 | MS.gene047554:CDS | 40.0% | |
ACCTGTTGCTAGTACTTTGA+TGG | - | chr2.1:71568172-71568191 | MS.gene047554:CDS | 40.0% | |
ACCTGTTGCTGAATATCCTT+AGG | + | chr2.1:71567960-71567979 | None:intergenic | 40.0% | |
AGAACCTGTATAGCATACTG+CGG | + | chr2.1:71568587-71568606 | None:intergenic | 40.0% | |
AGAATTCGTTGCAGATGCTT+GGG | - | chr2.1:71568222-71568241 | MS.gene047554:CDS | 40.0% | |
ATATCGATCAAAACAGGTCC+AGG | + | chr2.1:71567936-71567955 | None:intergenic | 40.0% | |
ATCAGTACCAATCATTCTCC+GGG | + | chr2.1:71567787-71567806 | None:intergenic | 40.0% | |
ATTCTCATCCGAACTAGGAT+AGG | + | chr2.1:71568207-71568226 | None:intergenic | 40.0% | |
CAATATGAACAATCTTCGCC+CGG | + | chr2.1:71568358-71568377 | None:intergenic | 40.0% | |
CAATGACATCAAGAAGGTAG+GGG | + | chr2.1:71569096-71569115 | None:intergenic | 40.0% | |
CAGAAAATGTTAGATACCCC+TGG | - | chr2.1:71569070-71569089 | MS.gene047554:CDS | 40.0% | |
CATCAGTACCAATCATTCTC+CGG | + | chr2.1:71567788-71567807 | None:intergenic | 40.0% | |
CCCAATATGTTGAAGTTTGC+AGG | - | chr2.1:71568989-71569008 | MS.gene047554:CDS | 40.0% | |
CCTGTTGCTAGTACTTTGAT+GGG | - | chr2.1:71568173-71568192 | MS.gene047554:CDS | 40.0% | |
CGAATTGGGATCAACCTATT+AGG | - | chr2.1:71567988-71568007 | MS.gene047554:CDS | 40.0% | |
CGGGAAATGAATTGTTCATG+TGG | + | chr2.1:71567444-71567463 | None:intergenic | 40.0% | |
CTGTTGCTAGTACTTTGATG+GGG | - | chr2.1:71568174-71568193 | MS.gene047554:CDS | 40.0% | |
GAACAATCAACACTTGGGTA+TGG | - | chr2.1:71568883-71568902 | MS.gene047554:CDS | 40.0% | |
GATATTGATGCTGCTGAGAT+TGG | - | chr2.1:71568377-71568396 | MS.gene047554:CDS | 40.0% | |
GATCCATTTGCAGGAATCAT+TGG | + | chr2.1:71569142-71569161 | None:intergenic | 40.0% | |
TCAAGAAACTCCGATTGTTG+AGG | - | chr2.1:71567812-71567831 | MS.gene047554:CDS | 40.0% | |
TGAATTGTAGCGAGGAATTG+AGG | - | chr2.1:71568126-71568145 | MS.gene047554:CDS | 40.0% | |
TGGTAGTTTGAATTGTAGCG+AGG | - | chr2.1:71568118-71568137 | MS.gene047554:CDS | 40.0% | |
TGTTCCAAATGTGCCTCTTT+CGG | + | chr2.1:71568047-71568066 | None:intergenic | 40.0% | |
TGTTGGACAACATCAGATGT+GGG | - | chr2.1:71568646-71568665 | MS.gene047554:CDS | 40.0% | |
TGTTTGGGGAAGTGGAAAAT+GGG | + | chr2.1:71567341-71567360 | None:intergenic | 40.0% | |
TTCTTGACGAGCTTACCAAT+GGG | - | chr2.1:71568603-71568622 | MS.gene047554:CDS | 40.0% | |
TTGCCAATGATTCCTGCAAA+TGG | - | chr2.1:71569136-71569155 | MS.gene047554:CDS | 40.0% | |
TTGTGGTGAAGATGAAGAGA+TGG | + | chr2.1:71567280-71567299 | None:intergenic | 40.0% | |
TTTATAGGTACAAGAGACCG+AGG | - | chr2.1:71568678-71568697 | MS.gene047554:CDS | 40.0% | |
TTTGAGGATGTCATAACCGA+GGG | - | chr2.1:71569163-71569182 | MS.gene047554:CDS | 40.0% | |
! | AGTGATCTTTTGCTTGCGTT+TGG | - | chr2.1:71568284-71568303 | MS.gene047554:CDS | 40.0% |
! | CACATTTGGAACAGATTGTG+AGG | - | chr2.1:71568054-71568073 | MS.gene047554:CDS | 40.0% |
! | GAAGGGGATCAATCGAATTT+TGG | - | chr2.1:71568451-71568470 | MS.gene047554:CDS | 40.0% |
! | GGTAAGTGATTCTGAAAACG+TGG | + | chr2.1:71567320-71567339 | None:intergenic | 40.0% |
! | GTGATCTTTTGCTTGCGTTT+GGG | - | chr2.1:71568285-71568304 | MS.gene047554:CDS | 40.0% |
! | TGATCTTTTGCTTGCGTTTG+GGG | - | chr2.1:71568286-71568305 | MS.gene047554:CDS | 40.0% |
! | TTGGGGTTAGGTTTGATGAT+CGG | - | chr2.1:71568303-71568322 | MS.gene047554:CDS | 40.0% |
! | TTTTCTGAATCGCTGCTCTA+AGG | + | chr2.1:71569057-71569076 | None:intergenic | 40.0% |
!! | AAGCGGAGATTTTGAAAGAG+CGG | + | chr2.1:71567383-71567402 | None:intergenic | 40.0% |
!! | GCTATCATAAGTACTGGTGT+TGG | - | chr2.1:71568629-71568648 | MS.gene047554:CDS | 40.0% |
!! | GGATTTGAAGTTGGCTTTGA+AGG | - | chr2.1:71568433-71568452 | MS.gene047554:CDS | 40.0% |
!! | TGAGTTTGAAGGGAGTGTTT+GGG | + | chr2.1:71567356-71567375 | None:intergenic | 40.0% |
!! | TTGAGTTTGAAGGGAGTGTT+TGG | + | chr2.1:71567357-71567376 | None:intergenic | 40.0% |
!!! | AGTGGTTTTTTGAGTAGGGT+TGG | + | chr2.1:71567412-71567431 | None:intergenic | 40.0% |
!!! | ATGGGAGTGGTTTTTTGAGT+AGG | + | chr2.1:71567417-71567436 | None:intergenic | 40.0% |
!!! | CTGAAAACGTGGTTTTGGTT+TGG | + | chr2.1:71567309-71567328 | None:intergenic | 40.0% |
!!! | TGGGAGTGGTTTTTTGAGTA+GGG | + | chr2.1:71567416-71567435 | None:intergenic | 40.0% |
!!! | TTTTTGAGTAGGGTTGGAGA+TGG | + | chr2.1:71567406-71567425 | None:intergenic | 40.0% |
AATAGAGCTCACACCTACCT+GGG | - | chr2.1:71568938-71568957 | MS.gene047554:CDS | 45.0% | |
AATTGTTCATGTGGGGGGAT+GGG | + | chr2.1:71567435-71567454 | None:intergenic | 45.0% | |
ACAAATGTCTTCGCTTACCC+TGG | - | chr2.1:71567531-71567550 | MS.gene047554:CDS | 45.0% | |
ACTTATGATAGCCTCCCCAT+TGG | + | chr2.1:71568621-71568640 | None:intergenic | 45.0% | |
AGTACTAGCAACAGGTACAC+CGG | + | chr2.1:71568168-71568187 | None:intergenic | 45.0% | |
ATGTCAACCACAATAGCGTC+GGG | + | chr2.1:71568779-71568798 | None:intergenic | 45.0% | |
ATTGTAGCGAGGAATTGAGG+CGG | - | chr2.1:71568129-71568148 | MS.gene047554:CDS | 45.0% | |
CCACCACCAACATACAAAAC+AGG | + | chr2.1:71568101-71568120 | None:intergenic | 45.0% | |
CTCGGTTATGACATCCTCAA+AGG | + | chr2.1:71569164-71569183 | None:intergenic | 45.0% | |
GAATAAGCAGCCTCATGTGT+CGG | - | chr2.1:71568403-71568422 | MS.gene047554:CDS | 45.0% | |
GAGAATTCGTTGCAGATGCT+TGG | - | chr2.1:71568221-71568240 | MS.gene047554:CDS | 45.0% | |
GAGAGTAAGCTTGATTTCGG+AGG | - | chr2.1:71568488-71568507 | MS.gene047554:CDS | 45.0% | |
GATGTCAACCACAATAGCGT+CGG | + | chr2.1:71568780-71568799 | None:intergenic | 45.0% | |
GCGGTACAATGACATCAAGA+AGG | + | chr2.1:71569102-71569121 | None:intergenic | 45.0% | |
GCTAGTACTTTGATGGGGTT+GGG | - | chr2.1:71568179-71568198 | MS.gene047554:CDS | 45.0% | |
GCTATTGTGGTTGACATCGA+TGG | - | chr2.1:71568782-71568801 | MS.gene047554:CDS | 45.0% | |
GTAAGCTTGATTTCGGAGGT+TGG | - | chr2.1:71568492-71568511 | MS.gene047554:CDS | 45.0% | |
GTGTTGGACAACATCAGATG+TGG | - | chr2.1:71568645-71568664 | MS.gene047554:CDS | 45.0% | |
GTGTTTGGGGAAGTGGAAAA+TGG | + | chr2.1:71567342-71567361 | None:intergenic | 45.0% | |
GTTCTTGACGAGCTTACCAA+TGG | - | chr2.1:71568602-71568621 | MS.gene047554:CDS | 45.0% | |
GTTGGGTTCCTATCCTAGTT+CGG | - | chr2.1:71568196-71568215 | MS.gene047554:CDS | 45.0% | |
TCAGGAGTTGGCTACTATCA+AGG | - | chr2.1:71568829-71568848 | MS.gene047554:CDS | 45.0% | |
TCAGTACCAATCATTCTCCG+GGG | + | chr2.1:71567786-71567805 | None:intergenic | 45.0% | |
TCCTCAAAGGATCCATTTGC+AGG | + | chr2.1:71569151-71569170 | None:intergenic | 45.0% | |
TCCTGCAAATGGATCCTTTG+AGG | - | chr2.1:71569147-71569166 | MS.gene047554:CDS | 45.0% | |
TCTTGACGAGCTTACCAATG+GGG | - | chr2.1:71568604-71568623 | MS.gene047554:CDS | 45.0% | |
TGACGAGATTAGTAGCACCT+GGG | + | chr2.1:71567704-71567723 | None:intergenic | 45.0% | |
TGCTAGTACTTTGATGGGGT+TGG | - | chr2.1:71568178-71568197 | MS.gene047554:CDS | 45.0% | |
TGGTGAAGATGAAGAGATGG+TGG | + | chr2.1:71567277-71567296 | None:intergenic | 45.0% | |
TTAGCTTCTAGTGGTAGACC+TGG | - | chr2.1:71567915-71567934 | MS.gene047554:CDS | 45.0% | |
TTGAAGTTTGCAGGTGCTTG+TGG | - | chr2.1:71568998-71569017 | MS.gene047554:CDS | 45.0% | |
! | AGGTTTGATGATCGGGTTAC+TGG | - | chr2.1:71568311-71568330 | MS.gene047554:CDS | 45.0% |
! | CCCATCAAAGTACTAGCAAC+AGG | + | chr2.1:71568176-71568195 | None:intergenic | 45.0% |
! | CTTTGAGGATGTCATAACCG+AGG | - | chr2.1:71569162-71569181 | MS.gene047554:CDS | 45.0% |
! | GGTTTGATGATCGGGTTACT+GGG | - | chr2.1:71568312-71568331 | MS.gene047554:CDS | 45.0% |
! | GGTTTGTGGGGATTTGAAGT+TGG | - | chr2.1:71568424-71568443 | MS.gene047554:CDS | 45.0% |
! | TGGGGTTAGGTTTGATGATC+GGG | - | chr2.1:71568304-71568323 | MS.gene047554:CDS | 45.0% |
!! | AGGCGGTTTGTTGAGTTAAC+CGG | - | chr2.1:71568146-71568165 | MS.gene047554:CDS | 45.0% |
!! | CCTGTTTTGTATGTTGGTGG+TGG | - | chr2.1:71568098-71568117 | MS.gene047554:CDS | 45.0% |
!! | GAGTTTGAAGGGAGTGTTTG+GGG | + | chr2.1:71567355-71567374 | None:intergenic | 45.0% |
!! | TGTGGGCTGCTCAGTTTTAT+AGG | - | chr2.1:71568663-71568682 | MS.gene047554:CDS | 45.0% |
!! | TTTTGCTTGCGTTTGGGGTT+AGG | - | chr2.1:71568291-71568310 | MS.gene047554:CDS | 45.0% |
AATGTCTTCGCTTACCCTGG+CGG | - | chr2.1:71567534-71567553 | MS.gene047554:CDS | 50.0% | |
ACCTGTATAGCATACTGCGG+AGG | + | chr2.1:71568584-71568603 | None:intergenic | 50.0% | |
ACTTATCCTGCCATCACCCT+CGG | + | chr2.1:71569182-71569201 | None:intergenic | 50.0% | |
ACTTGGGTATGGTTGTCCAG+TGG | - | chr2.1:71568894-71568913 | MS.gene047554:CDS | 50.0% | |
AGAGCGGTGGTTGAGTTTGA+AGG | + | chr2.1:71567367-71567386 | None:intergenic | 50.0% | |
AGTAGGGTTGGAGATGGAAG+CGG | + | chr2.1:71567400-71567419 | None:intergenic | 50.0% | |
ATTCCACCTTGTTCGTGACG+AGG | + | chr2.1:71567618-71567637 | None:intergenic | 50.0% | |
CAATAGAGCTCACACCTACC+TGG | - | chr2.1:71568937-71568956 | MS.gene047554:CDS | 50.0% | |
CAGGTAGGTGTGAGCTCTAT+TGG | + | chr2.1:71568939-71568958 | None:intergenic | 50.0% | |
CGCTATGGGATTTGGATTGC+CGG | - | chr2.1:71568727-71568746 | MS.gene047554:CDS | 50.0% | |
CTGACGAGATTAGTAGCACC+TGG | + | chr2.1:71567705-71567724 | None:intergenic | 50.0% | |
CTTGGGTATGGTTGTCCAGT+GGG | - | chr2.1:71568895-71568914 | MS.gene047554:CDS | 50.0% | |
GAATTGTTCATGTGGGGGGA+TGG | + | chr2.1:71567436-71567455 | None:intergenic | 50.0% | |
GAGCGGTGGTTGAGTTTGAA+GGG | + | chr2.1:71567366-71567385 | None:intergenic | 50.0% | |
GATGTCATAACCGAGGGTGA+TGG | - | chr2.1:71569169-71569188 | MS.gene047554:CDS | 50.0% | |
GGAGTTGGCTACTATCAAGG+TGG | - | chr2.1:71568832-71568851 | MS.gene047554:CDS | 50.0% | |
GGCAACACATGCTCTTGATG+CGG | + | chr2.1:71569121-71569140 | None:intergenic | 50.0% | |
GGGGAGGCTATCATAAGTAC+TGG | - | chr2.1:71568623-71568642 | MS.gene047554:CDS | 50.0% | |
GTGGTTGACATCGATGGTGA+TGG | - | chr2.1:71568788-71568807 | MS.gene047554:CDS | 50.0% | |
GTTCCGCTTATTGCCATCAC+CGG | - | chr2.1:71567753-71567772 | MS.gene047554:CDS | 50.0% | |
TATAGAACCGATCCTCCCAC+TGG | + | chr2.1:71568913-71568932 | None:intergenic | 50.0% | |
TCCTCCGCAGTATGCTATAC+AGG | - | chr2.1:71568580-71568599 | MS.gene047554:CDS | 50.0% | |
TGCAGATGCTTGGGATGCAT+GGG | - | chr2.1:71568231-71568250 | MS.gene047554:CDS | 50.0% | |
TGCAGGTGCTTGTGGTATAC+CGG | - | chr2.1:71569006-71569025 | MS.gene047554:CDS | 50.0% | |
TTCCACCTTGTTCGTGACGA+GGG | + | chr2.1:71567617-71567636 | None:intergenic | 50.0% | |
TTGCAGATGCTTGGGATGCA+TGG | - | chr2.1:71568230-71568249 | MS.gene047554:CDS | 50.0% | |
! | AACCACAATAGCGTCGGGAT+TGG | + | chr2.1:71568774-71568793 | None:intergenic | 50.0% |
! | AGGATATCTGCGCCTTTTCG+GGG | + | chr2.1:71567483-71567502 | None:intergenic | 50.0% |
! | CGAGGATATCTGCGCCTTTT+CGG | + | chr2.1:71567485-71567504 | None:intergenic | 50.0% |
! | GAGGATATCTGCGCCTTTTC+GGG | + | chr2.1:71567484-71567503 | None:intergenic | 50.0% |
! | GTCGAAGCACTTGAACGTCA+GGG | - | chr2.1:71567504-71567523 | MS.gene047554:CDS | 50.0% |
! | TGACCGGTGATGGCAATAAG+CGG | + | chr2.1:71567759-71567778 | None:intergenic | 50.0% |
! | TGGTTGACTTCTGCTGGTCT+TGG | - | chr2.1:71568704-71568723 | MS.gene047554:CDS | 50.0% |
!! | AGCCTCATGTGTCGGTTTGT+GGG | - | chr2.1:71568411-71568430 | MS.gene047554:CDS | 50.0% |
!! | CGGAGATTTTGAAAGAGCGG+TGG | + | chr2.1:71567380-71567399 | None:intergenic | 50.0% |
!! | GGTGCTACTAATCTCGTCAG+TGG | - | chr2.1:71567705-71567724 | MS.gene047554:CDS | 50.0% |
AAGTGGCGATGCAGACACCA+GGG | + | chr2.1:71567677-71567696 | None:intergenic | 55.0% | |
ACATCAAGAAGGTAGGGGCC+AGG | + | chr2.1:71569091-71569110 | None:intergenic | 55.0% | |
ACGAGGGAGGACGTTACGAA+TGG | + | chr2.1:71567601-71567620 | None:intergenic | 55.0% | |
AGGGAGGACGTTACGAATGG+CGG | + | chr2.1:71567598-71567617 | None:intergenic | 55.0% | |
AGGTGGAATATTCGCTGCCG+AGG | - | chr2.1:71567629-71567648 | MS.gene047554:CDS | 55.0% | |
ATCAAGAAGGTAGGGGCCAG+GGG | + | chr2.1:71569089-71569108 | None:intergenic | 55.0% | |
ATTGGCAACAGCAGCTCCCA+TGG | + | chr2.1:71568756-71568775 | None:intergenic | 55.0% | |
CAGGTTCCCCGGAGAATGAT+TGG | - | chr2.1:71567777-71567796 | MS.gene047554:CDS | 55.0% | |
CATCAAGAAGGTAGGGGCCA+GGG | + | chr2.1:71569090-71569109 | None:intergenic | 55.0% | |
CTCTTTGTCACACGAGCTGC+CGG | + | chr2.1:71569028-71569047 | None:intergenic | 55.0% | |
GACGTTCAAGTGCTTCGACG+AGG | + | chr2.1:71567503-71567522 | None:intergenic | 55.0% | |
GAGATTAGTAGCACCTGGGC+CGG | + | chr2.1:71567700-71567719 | None:intergenic | 55.0% | |
GATGCAGACACCAGGGAAAC+CGG | + | chr2.1:71567670-71567689 | None:intergenic | 55.0% | |
GCAGAAGTCAACCACTGCCT+CGG | + | chr2.1:71568698-71568717 | None:intergenic | 55.0% | |
GCTTATTGCCATCACCGGTC+AGG | - | chr2.1:71567758-71567777 | MS.gene047554:CDS | 55.0% | |
GGCAGCTCGTGTGACAAAGA+GGG | - | chr2.1:71569027-71569046 | MS.gene047554:CDS | 55.0% | |
GGGGTTCGTTAGGGGCAAAT+CGG | + | chr2.1:71567464-71567483 | None:intergenic | 55.0% | |
GGGTTCGTTAGGGGCAAATC+GGG | + | chr2.1:71567463-71567482 | None:intergenic | 55.0% | |
GGTCTTGGCGCTATGGGATT+TGG | - | chr2.1:71568719-71568738 | MS.gene047554:CDS | 55.0% | |
GGTGGAATATTCGCTGCCGA+GGG | - | chr2.1:71567630-71567649 | MS.gene047554:CDS | 55.0% | |
TCCCCACAAACCGACACATG+AGG | + | chr2.1:71568416-71568435 | None:intergenic | 55.0% | |
TCGGGTTACTGGGAAGCTTG+AGG | - | chr2.1:71568322-71568341 | MS.gene047554:CDS | 55.0% | |
TGACGAGCTTACCAATGGGG+AGG | - | chr2.1:71568607-71568626 | MS.gene047554:CDS | 55.0% | |
TGCCAATCCCGACGCTATTG+TGG | - | chr2.1:71568769-71568788 | MS.gene047554:CDS | 55.0% | |
TGGTTGTCCAGTGGGAGGAT+CGG | - | chr2.1:71568903-71568922 | MS.gene047554:CDS | 55.0% | |
! | AGAGATGGTGGTCGTGAACG+CGG | + | chr2.1:71567265-71567284 | None:intergenic | 55.0% |
! | AGCTTGAGGCTTTTGCGAGC+CGG | - | chr2.1:71568336-71568355 | MS.gene047554:CDS | 55.0% |
! | AGGCAGTGGTTGACTTCTGC+TGG | - | chr2.1:71568698-71568717 | MS.gene047554:CDS | 55.0% |
! | ATTTGGATTGCCGGCTGCCA+TGG | - | chr2.1:71568736-71568755 | MS.gene047554:CDS | 55.0% |
! | CGTCGAAGCACTTGAACGTC+AGG | - | chr2.1:71567503-71567522 | MS.gene047554:CDS | 55.0% |
! | GAACGCGGTTTTTGCAGCAG+TGG | + | chr2.1:71567250-71567269 | None:intergenic | 55.0% |
! | GGCACCGAAAGAGGCACATT+TGG | - | chr2.1:71568040-71568059 | MS.gene047554:CDS | 55.0% |
! | TCATAACCGAGGGTGATGGC+AGG | - | chr2.1:71569173-71569192 | MS.gene047554:CDS | 55.0% |
! | TTTGGATTGCCGGCTGCCAT+GGG | - | chr2.1:71568737-71568756 | MS.gene047554:CDS | 55.0% |
!! | ATGTGCCTCTTTCGGTGCCT+TGG | + | chr2.1:71568039-71568058 | None:intergenic | 55.0% |
!! | ATTTCCATTGAAGCGCCGCC+AGG | + | chr2.1:71567552-71567571 | None:intergenic | 55.0% |
!! | CAGCCTCATGTGTCGGTTTG+TGG | - | chr2.1:71568410-71568429 | MS.gene047554:CDS | 55.0% |
!! | CGCCTTTTCGGGGTTCGTTA+GGG | + | chr2.1:71567473-71567492 | None:intergenic | 55.0% |
!! | GAAGGGAGTGTTTGGGGAAG+TGG | + | chr2.1:71567349-71567368 | None:intergenic | 55.0% |
!! | GCCTCATGTGTCGGTTTGTG+GGG | - | chr2.1:71568412-71568431 | MS.gene047554:CDS | 55.0% |
!! | GCCTTTTCGGGGTTCGTTAG+GGG | + | chr2.1:71567472-71567491 | None:intergenic | 55.0% |
!! | GTTACCCAAGGCACCGAAAG+AGG | - | chr2.1:71568031-71568050 | MS.gene047554:CDS | 55.0% |
!! | TCTGCTGGTCTTGGCGCTAT+GGG | - | chr2.1:71568713-71568732 | MS.gene047554:CDS | 55.0% |
!! | TGTGCCTCTTTCGGTGCCTT+GGG | + | chr2.1:71568038-71568057 | None:intergenic | 55.0% |
!! | TTCTGCTGGTCTTGGCGCTA+TGG | - | chr2.1:71568712-71568731 | MS.gene047554:CDS | 55.0% |
!! | TTTCCATTGAAGCGCCGCCA+GGG | + | chr2.1:71567551-71567570 | None:intergenic | 55.0% |
ATTGGCTGGGTCTCCCAGGT+AGG | + | chr2.1:71568954-71568973 | None:intergenic | 60.0% | |
CACCTTGTTCGTGACGAGGG+AGG | + | chr2.1:71567614-71567633 | None:intergenic | 60.0% | |
CATTCTCCGGGGAACCTGAC+CGG | + | chr2.1:71567775-71567794 | None:intergenic | 60.0% | |
CGGCAGCTCGTGTGACAAAG+AGG | - | chr2.1:71569026-71569045 | MS.gene047554:CDS | 60.0% | |
CTCCCTCGTCACGAACAAGG+TGG | - | chr2.1:71567612-71567631 | MS.gene047554:CDS | 60.0% | |
GAAGTGGCGATGCAGACACC+AGG | + | chr2.1:71567678-71567697 | None:intergenic | 60.0% | |
GAGGACGTTACGAATGGCGG+TGG | + | chr2.1:71567595-71567614 | None:intergenic | 60.0% | |
GAGGGTTACGCTCGTTCCTC+CGG | - | chr2.1:71567648-71567667 | MS.gene047554:CDS | 60.0% | |
GCCCCTAACGAACCCCGAAA+AGG | - | chr2.1:71567468-71567487 | MS.gene047554:CDS | 60.0% | |
GGAGGAACGAGCGTAACCCT+CGG | + | chr2.1:71567649-71567668 | None:intergenic | 60.0% | |
GGGTATGGTTGTCCAGTGGG+AGG | - | chr2.1:71568898-71568917 | MS.gene047554:CDS | 60.0% | |
GGTACAAGAGACCGAGGCAG+TGG | - | chr2.1:71568684-71568703 | MS.gene047554:CDS | 60.0% | |
GGTGTCTGCATCGCCACTTC+CGG | - | chr2.1:71567678-71567697 | MS.gene047554:CDS | 60.0% | |
GTCCTCCCTCGTCACGAACA+AGG | - | chr2.1:71567609-71567628 | MS.gene047554:CDS | 60.0% | |
TTACCCTGGCGGCGCTTCAA+TGG | - | chr2.1:71567545-71567564 | MS.gene047554:CDS | 60.0% | |
TTCATGTGGGGGGATGGGAG+TGG | + | chr2.1:71567430-71567449 | None:intergenic | 60.0% | |
! | GCTTGAGGCTTTTGCGAGCC+GGG | - | chr2.1:71568337-71568356 | MS.gene047554:CDS | 60.0% |
! | TCTCATTGGCTGGGTCTCCC+AGG | + | chr2.1:71568958-71568977 | None:intergenic | 60.0% |
!! | GCGCCTTTTCGGGGTTCGTT+AGG | + | chr2.1:71567474-71567493 | None:intergenic | 60.0% |
ACAGCAGCTCCCATGGCAGC+CGG | + | chr2.1:71568749-71568768 | None:intergenic | 65.0% | |
AGTAGCACCTGGGCCGGAAG+TGG | + | chr2.1:71567694-71567713 | None:intergenic | 65.0% | |
CCATCACCGGTCAGGTTCCC+CGG | - | chr2.1:71567766-71567785 | MS.gene047554:CDS | 65.0% | |
GCAGACACCAGGGAAACCGG+AGG | + | chr2.1:71567667-71567686 | None:intergenic | 65.0% | |
GCTCGTTCCTCCGGTTTCCC+TGG | - | chr2.1:71567657-71567676 | MS.gene047554:CDS | 65.0% | |
CCGGGGAACCTGACCGGTGA+TGG | + | chr2.1:71567769-71567788 | None:intergenic | 70.0% | |
TGCATCGCCACTTCCGGCCC+AGG | - | chr2.1:71567684-71567703 | MS.gene047554:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 71567240 | 71569207 | 71567240 | ID=MS.gene047554 |
chr2.1 | mRNA | 71567240 | 71569207 | 71567240 | ID=MS.gene047554.t1;Parent=MS.gene047554 |
chr2.1 | exon | 71567240 | 71569207 | 71567240 | ID=MS.gene047554.t1.exon1;Parent=MS.gene047554.t1 |
chr2.1 | CDS | 71567240 | 71569207 | 71567240 | ID=cds.MS.gene047554.t1;Parent=MS.gene047554.t1 |
Gene Sequence |
Protein sequence |