AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047554


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047554.t1 MTR_2g013120 97.710 655 15 0 1 655 1 655 0.0 1323
MS.gene047554.t1 MTR_3g099190 80.732 628 115 3 31 655 27 651 0.0 1065
MS.gene047554.t1 MTR_2g027220 77.098 572 127 2 66 633 42 613 0.0 945
MS.gene047554.t1 MTR_6g004200 24.644 491 330 11 84 550 6 480 7.23e-35 140
MS.gene047554.t1 MTR_7g069540 23.034 534 361 16 63 574 28 533 1.05e-16 84.3
MS.gene047554.t1 MTR_2g009330 21.722 511 334 17 96 574 64 540 2.18e-15 80.1
MS.gene047554.t1 MTR_5g046610 22.325 542 377 17 52 574 19 535 3.29e-15 79.7
MS.gene047554.t1 MTR_4g017200 22.325 542 377 17 52 574 19 535 4.54e-15 79.0
MS.gene047554.t1 MTR_2g027200 50.000 62 12 1 555 616 1 43 5.53e-14 67.0
MS.gene047554.t1 MTR_2g015560 21.942 515 340 17 88 572 26 508 1.01e-13 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047554.t1 AT3G48560 83.959 586 94 0 70 655 85 670 0.0 1047
MS.gene047554.t1 AT5G17380 27.328 494 309 12 84 550 14 484 1.02e-46 174
MS.gene047554.t1 AT5G01330 24.237 524 321 17 88 574 36 520 1.58e-19 93.2
MS.gene047554.t1 AT5G01320 22.562 523 331 15 88 574 47 531 1.88e-17 86.7
MS.gene047554.t1 AT4G33070 22.328 524 331 15 88 574 51 535 2.85e-16 83.2
MS.gene047554.t1 AT5G54960 22.180 532 366 16 61 572 30 533 8.92e-16 81.3

Find 214 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGGGGATCAATCGAATTT+TGG 0.232600 2.1:-71567974 MS.gene047554:CDS
CCCAATATGTTGAAGTTTGC+AGG 0.240705 2.1:-71567436 MS.gene047554:CDS
GATCAACCTATTAGGTTAAC+TGG 0.252439 2.1:-71568429 MS.gene047554:CDS
AATATTTCTTTCTCATTGGC+TGG 0.252481 2.1:+71567460 None:intergenic
TTCAACAACAATATCTTAAC+AGG 0.266547 2.1:+71567562 None:intergenic
GTGTTTGGGGAAGTGGAAAA+TGG 0.269439 2.1:+71569086 None:intergenic
CGCTATGGGATTTGGATTGC+CGG 0.275397 2.1:-71567698 MS.gene047554:CDS
ACCTGCAAACTTCAACATAT+TGG 0.275568 2.1:+71567435 None:intergenic
CGAATTGGGATCAACCTATT+AGG 0.276452 2.1:-71568437 MS.gene047554:CDS
ACAGATTGTGAGGTTGTTAT+TGG 0.278604 2.1:-71568361 MS.gene047554:CDS
GGTCTTGGCGCTATGGGATT+TGG 0.283365 2.1:-71567706 MS.gene047554:CDS
AGGTTTGATGATCGGGTTAC+TGG 0.289362 2.1:-71568114 MS.gene047554:CDS
TTGAGTTTGAAGGGAGTGTT+TGG 0.289702 2.1:+71569071 None:intergenic
CCTGCAAACTTCAACATATT+GGG 0.314608 2.1:+71567436 None:intergenic
CAGGTAGGTGTGAGCTCTAT+TGG 0.318135 2.1:+71567489 None:intergenic
TGCTAGTACTTTGATGGGGT+TGG 0.322703 2.1:-71568247 MS.gene047554:CDS
AACAGGTTTCTGTTCCGAAT+TGG 0.337313 2.1:-71568452 MS.gene047554:CDS
TGTTCCAAATGTGCCTCTTT+CGG 0.341709 2.1:+71568381 None:intergenic
ATATACCCAGTTAACCTAAT+AGG 0.345011 2.1:+71568423 None:intergenic
ATTTGGATTGCCGGCTGCCA+TGG 0.358680 2.1:-71567689 MS.gene047554:CDS
GGGGAATATTTCTTTCTCAT+TGG 0.363131 2.1:+71567456 None:intergenic
GAAGGGAGTGTTTGGGGAAG+TGG 0.366408 2.1:+71569079 None:intergenic
GGCACCGAAAGAGGCACATT+TGG 0.369187 2.1:-71568385 MS.gene047554:CDS
GATCCATTTGCAGGAATCAT+TGG 0.370032 2.1:+71567286 None:intergenic
TGATTCTGAAAACGTGGTTT+TGG 0.372112 2.1:+71569114 None:intergenic
GGATTTGAAGTTGGCTTTGA+AGG 0.374802 2.1:-71567992 MS.gene047554:CDS
ACCTGTTGCTAGTACTTTGA+TGG 0.375227 2.1:-71568253 MS.gene047554:CDS
CAGCCTCATGTGTCGGTTTG+TGG 0.375821 2.1:-71568015 MS.gene047554:CDS
AAGCTTTATGATGAATGTTC+AGG 0.379274 2.1:-71567614 MS.gene047554:CDS
ACAGGTTTCTGTTCCGAATT+GGG 0.386257 2.1:-71568451 MS.gene047554:CDS
TCCTCAAAGGATCCATTTGC+AGG 0.389166 2.1:+71567277 None:intergenic
ATGTGCCTCTTTCGGTGCCT+TGG 0.389362 2.1:+71568389 None:intergenic
ACCTAAGGATATTCAGCAAC+AGG 0.392227 2.1:-71568469 MS.gene047554:CDS
GGTTAACTGGGTATATGAAT+AGG 0.392870 2.1:-71568416 MS.gene047554:CDS
TTCTGCTGGTCTTGGCGCTA+TGG 0.393331 2.1:-71567713 MS.gene047554:CDS
ACAGCAGCTCCCATGGCAGC+CGG 0.395329 2.1:+71567679 None:intergenic
GATATTGATGCTGCTGAGAT+TGG 0.396931 2.1:-71568048 MS.gene047554:CDS
TGGGGTTAGGTTTGATGATC+GGG 0.402613 2.1:-71568121 MS.gene047554:CDS
GGTGTCTGCATCGCCACTTC+CGG 0.403895 2.1:-71568747 MS.gene047554:CDS
AGAGCGGTGGTTGAGTTTGA+AGG 0.403984 2.1:+71569061 None:intergenic
GGGTTCGTTAGGGGCAAATC+GGG 0.405793 2.1:+71568965 None:intergenic
GCTAGTACTTTGATGGGGTT+GGG 0.408704 2.1:-71568246 MS.gene047554:CDS
GCTCGTTCCTCCGGTTTCCC+TGG 0.409653 2.1:-71568768 MS.gene047554:CDS
TGGTTGACTTCTGCTGGTCT+TGG 0.411154 2.1:-71567721 MS.gene047554:CDS
ATAGAGAGTAAGCTTGATTT+CGG 0.412100 2.1:-71567940 MS.gene047554:CDS
GAGAATTCGTTGCAGATGCT+TGG 0.413491 2.1:-71568204 MS.gene047554:CDS
AACTGAATGATCAGAAAGTT+AGG 0.416856 2.1:-71567903 MS.gene047554:CDS
AGCCTCATGTGTCGGTTTGT+GGG 0.418936 2.1:-71568014 MS.gene047554:CDS
TTGGGGTTAGGTTTGATGAT+CGG 0.419793 2.1:-71568122 MS.gene047554:CDS
TGTGCCTCTTTCGGTGCCTT+GGG 0.420636 2.1:+71568390 None:intergenic
AGGCGGTTTGTTGAGTTAAC+CGG 0.420654 2.1:-71568279 MS.gene047554:CDS
GATGCAGACACCAGGGAAAC+CGG 0.423544 2.1:+71568758 None:intergenic
GGGGTTCGTTAGGGGCAAAT+CGG 0.423916 2.1:+71568964 None:intergenic
TCCTCCGCAGTATGCTATAC+AGG 0.426227 2.1:-71567845 MS.gene047554:CDS
TGCATCGCCACTTCCGGCCC+AGG 0.426512 2.1:-71568741 MS.gene047554:CDS
CGTCGAAGCACTTGAACGTC+AGG 0.428461 2.1:-71568922 MS.gene047554:CDS
ATTTCCATTGAAGCGCCGCC+AGG 0.431656 2.1:+71568876 None:intergenic
TGAGTTTGAAGGGAGTGTTT+GGG 0.434798 2.1:+71569072 None:intergenic
CCATCACCGGTCAGGTTCCC+CGG 0.439113 2.1:-71568659 MS.gene047554:CDS
TCTGCTGGTCTTGGCGCTAT+GGG 0.442287 2.1:-71567712 MS.gene047554:CDS
CAATAGAGCTCACACCTACC+TGG 0.446335 2.1:-71567488 MS.gene047554:CDS
TTTGGATTGCCGGCTGCCAT+GGG 0.447144 2.1:-71567688 MS.gene047554:CDS
GATTTGAAGTTGGCTTTGAA+GGG 0.448952 2.1:-71567991 MS.gene047554:CDS
GCTTATTGCCATCACCGGTC+AGG 0.450703 2.1:-71568667 MS.gene047554:CDS
TCTCATTGGCTGGGTCTCCC+AGG 0.453592 2.1:+71567470 None:intergenic
CCTGTTGCTAGTACTTTGAT+GGG 0.454512 2.1:-71568252 MS.gene047554:CDS
GTTGGGTTCCTATCCTAGTT+CGG 0.456275 2.1:-71568229 MS.gene047554:CDS
TGTTTGGGGAAGTGGAAAAT+GGG 0.456756 2.1:+71569087 None:intergenic
TGCAGGTGCTTGTGGTATAC+CGG 0.457670 2.1:-71567419 MS.gene047554:CDS
CATCAAGAAGGTAGGGGCCA+GGG 0.457929 2.1:+71567338 None:intergenic
ACATCAAGAAGGTAGGGGCC+AGG 0.461753 2.1:+71567337 None:intergenic
CATCAGTACCAATCATTCTC+CGG 0.464538 2.1:+71568640 None:intergenic
TATGATGAATGTTCAGGAGT+TGG 0.465434 2.1:-71567608 MS.gene047554:CDS
CAGGTTCCCCGGAGAATGAT+TGG 0.466447 2.1:-71568648 MS.gene047554:CDS
ATCAGTACCAATCATTCTCC+GGG 0.467400 2.1:+71568641 None:intergenic
CCGGGGAACCTGACCGGTGA+TGG 0.468521 2.1:+71568659 None:intergenic
TTAGGTATATCGATCAAAAC+AGG 0.472536 2.1:+71568486 None:intergenic
AGTAGGGTTGGAGATGGAAG+CGG 0.473325 2.1:+71569028 None:intergenic
TTGCAGATGCTTGGGATGCA+TGG 0.475365 2.1:-71568195 MS.gene047554:CDS
CCCATCAAAGTACTAGCAAC+AGG 0.475566 2.1:+71568252 None:intergenic
TTACCCTGGCGGCGCTTCAA+TGG 0.476078 2.1:-71568880 MS.gene047554:CDS
AACCACAATAGCGTCGGGAT+TGG 0.482109 2.1:+71567654 None:intergenic
GTAAGCTTGATTTCGGAGGT+TGG 0.484920 2.1:-71567933 MS.gene047554:CDS
GAGGGTTACGCTCGTTCCTC+CGG 0.485552 2.1:-71568777 MS.gene047554:CDS
AGGCAGTGGTTGACTTCTGC+TGG 0.485926 2.1:-71567727 MS.gene047554:CDS
CTAATAGGTTGATCCCAATT+CGG 0.489964 2.1:+71568438 None:intergenic
TTCTTGACGAGCTTACCAAT+GGG 0.490237 2.1:-71567822 MS.gene047554:CDS
TTGCCAATGATTCCTGCAAA+TGG 0.490698 2.1:-71567289 MS.gene047554:CDS
ATATTTCTTTCTCATTGGCT+GGG 0.491931 2.1:+71567461 None:intergenic
CTCTTTGTCACACGAGCTGC+CGG 0.502154 2.1:+71567400 None:intergenic
CCACCACCAACATACAAAAC+AGG 0.502296 2.1:+71568327 None:intergenic
AGTAGCACCTGGGCCGGAAG+TGG 0.502445 2.1:+71568734 None:intergenic
TCCTGCAAATGGATCCTTTG+AGG 0.504950 2.1:-71567278 MS.gene047554:CDS
AGAATTCGTTGCAGATGCTT+GGG 0.506752 2.1:-71568203 MS.gene047554:CDS
GAAGTGGCGATGCAGACACC+AGG 0.511122 2.1:+71568750 None:intergenic
GGTTTGTGGGGATTTGAAGT+TGG 0.511799 2.1:-71568001 MS.gene047554:CDS
ACCTGTTGCTGAATATCCTT+AGG 0.511983 2.1:+71568468 None:intergenic
GCCCCTAACGAACCCCGAAA+AGG 0.516458 2.1:-71568957 MS.gene047554:CDS
GATCTAGTTACCTCAACAAT+CGG 0.519783 2.1:+71568603 None:intergenic
TGAATTGTAGCGAGGAATTG+AGG 0.520671 2.1:-71568299 MS.gene047554:CDS
TCAAACTTCTTATAACTCAT+CGG 0.521295 2.1:+71567877 None:intergenic
ATATTGATGCTGCTGAGATT+GGG 0.522267 2.1:-71568047 MS.gene047554:CDS
ATTGGCAACAGCAGCTCCCA+TGG 0.524757 2.1:+71567672 None:intergenic
GAGCGGTGGTTGAGTTTGAA+GGG 0.528109 2.1:+71569062 None:intergenic
TCAGGAGTTGGCTACTATCA+AGG 0.529463 2.1:-71567596 MS.gene047554:CDS
CATTCTCCGGGGAACCTGAC+CGG 0.531322 2.1:+71568653 None:intergenic
GTTCTTGACGAGCTTACCAA+TGG 0.533777 2.1:-71567823 MS.gene047554:CDS
GGGGAGGCTATCATAAGTAC+TGG 0.534253 2.1:-71567802 MS.gene047554:CDS
GCCTCATGTGTCGGTTTGTG+GGG 0.534297 2.1:-71568013 MS.gene047554:CDS
AACGCTTCATTCACTATCCT+AGG 0.535019 2.1:+71568537 None:intergenic
CTGACGAGATTAGTAGCACC+TGG 0.538331 2.1:+71568723 None:intergenic
ATTGGCTGGGTCTCCCAGGT+AGG 0.539147 2.1:+71567474 None:intergenic
TTGAAGTTTGCAGGTGCTTG+TGG 0.539914 2.1:-71567427 MS.gene047554:CDS
ACAAATGTCTTCGCTTACCC+TGG 0.542915 2.1:-71568894 MS.gene047554:CDS
ATCAAGAAGGTAGGGGCCAG+GGG 0.543925 2.1:+71567339 None:intergenic
ACAATGACATCAAGAAGGTA+GGG 0.544765 2.1:+71567331 None:intergenic
ATATCGATCAAAACAGGTCC+AGG 0.546128 2.1:+71568492 None:intergenic
TCAAGAAACTCCGATTGTTG+AGG 0.547823 2.1:-71568613 MS.gene047554:CDS
CTTGGGTATGGTTGTCCAGT+GGG 0.549540 2.1:-71567530 MS.gene047554:CDS
GTTGTTGAACAATCAACACT+TGG 0.549760 2.1:-71567548 MS.gene047554:CDS
GTTACCCAAGGCACCGAAAG+AGG 0.549898 2.1:-71568394 MS.gene047554:CDS
ATGTCAACCACAATAGCGTC+GGG 0.553806 2.1:+71567649 None:intergenic
ATTCTCATCCGAACTAGGAT+AGG 0.554840 2.1:+71568221 None:intergenic
CACATTTGGAACAGATTGTG+AGG 0.555893 2.1:-71568371 MS.gene047554:CDS
AACGAATTCTCATCCGAACT+AGG 0.556901 2.1:+71568216 None:intergenic
GTTCCGCTTATTGCCATCAC+CGG 0.557256 2.1:-71568672 MS.gene047554:CDS
GAGATTAGTAGCACCTGGGC+CGG 0.558857 2.1:+71568728 None:intergenic
AAGAACAAGATAATTATGCT+TGG 0.559558 2.1:+71568575 None:intergenic
GGTACAAGAGACCGAGGCAG+TGG 0.562380 2.1:-71567741 MS.gene047554:CDS
TGCAGATGCTTGGGATGCAT+GGG 0.563717 2.1:-71568194 MS.gene047554:CDS
GAGGACGTTACGAATGGCGG+TGG 0.567894 2.1:+71568833 None:intergenic
GCAGAAGTCAACCACTGCCT+CGG 0.568184 2.1:+71567730 None:intergenic
CAGAAAATGTTAGATACCCC+TGG 0.568513 2.1:-71567355 MS.gene047554:CDS
ATTTGAAGTTGGCTTTGAAG+GGG 0.570043 2.1:-71567990 MS.gene047554:CDS
CAATATGAACAATCTTCGCC+CGG 0.571633 2.1:+71568070 None:intergenic
ACTTATCCTGCCATCACCCT+CGG 0.572531 2.1:+71567246 None:intergenic
TACAATGACATCAAGAAGGT+AGG 0.574462 2.1:+71567330 None:intergenic
TCATAACCGAGGGTGATGGC+AGG 0.574956 2.1:-71567252 MS.gene047554:CDS
TGGTTGTCCAGTGGGAGGAT+CGG 0.577376 2.1:-71567522 MS.gene047554:CDS
GAGTTTGAAGGGAGTGTTTG+GGG 0.580053 2.1:+71569073 None:intergenic
GAACAATCAACACTTGGGTA+TGG 0.580544 2.1:-71567542 MS.gene047554:CDS
CGGGAAATGAATTGTTCATG+TGG 0.582959 2.1:+71568984 None:intergenic
TATAGAACCGATCCTCCCAC+TGG 0.583559 2.1:+71567515 None:intergenic
TTAGCTTCTAGTGGTAGACC+TGG 0.583844 2.1:-71568510 MS.gene047554:CDS
CTCGGTTATGACATCCTCAA+AGG 0.584779 2.1:+71567264 None:intergenic
GGGTATGGTTGTCCAGTGGG+AGG 0.585047 2.1:-71567527 MS.gene047554:CDS
CGGCAGCTCGTGTGACAAAG+AGG 0.586144 2.1:-71567399 MS.gene047554:CDS
AGGTGGAATATTCGCTGCCG+AGG 0.587958 2.1:-71568796 MS.gene047554:CDS
TTCCACCTTGTTCGTGACGA+GGG 0.588122 2.1:+71568811 None:intergenic
GGTTTGATGATCGGGTTACT+GGG 0.588175 2.1:-71568113 MS.gene047554:CDS
GAGAGTAAGCTTGATTTCGG+AGG 0.590245 2.1:-71567937 MS.gene047554:CDS
TTGTTGAACAATCAACACTT+GGG 0.590968 2.1:-71567547 MS.gene047554:CDS
GCTATCATAAGTACTGGTGT+TGG 0.593538 2.1:-71567796 MS.gene047554:CDS
GGGAAATGAATTGTTCATGT+GGG 0.594371 2.1:+71568985 None:intergenic
ATCAACCTATTAGGTTAACT+GGG 0.594575 2.1:-71568428 MS.gene047554:CDS
GTCCTCCCTCGTCACGAACA+AGG 0.595803 2.1:-71568816 MS.gene047554:CDS
GATGTCATAACCGAGGGTGA+TGG 0.596424 2.1:-71567256 MS.gene047554:CDS
CTGCAAACTTCAACATATTG+GGG 0.597132 2.1:+71567437 None:intergenic
TGCCAATCCCGACGCTATTG+TGG 0.597385 2.1:-71567656 MS.gene047554:CDS
ACTTATGATAGCCTCCCCAT+TGG 0.598564 2.1:+71567807 None:intergenic
ATTCCACCTTGTTCGTGACG+AGG 0.598895 2.1:+71568810 None:intergenic
AATAGAGCTCACACCTACCT+GGG 0.601839 2.1:-71567487 MS.gene047554:CDS
AGAGATGGTGGTCGTGAACG+CGG 0.602156 2.1:+71569163 None:intergenic
TCGGGTTACTGGGAAGCTTG+AGG 0.605782 2.1:-71568103 MS.gene047554:CDS
CTGTTGCTAGTACTTTGATG+GGG 0.606374 2.1:-71568251 MS.gene047554:CDS
GTGGTTGACATCGATGGTGA+TGG 0.607155 2.1:-71567637 MS.gene047554:CDS
GGCAGCTCGTGTGACAAAGA+GGG 0.609397 2.1:-71567398 MS.gene047554:CDS
GAATAAGCAGCCTCATGTGT+CGG 0.610801 2.1:-71568022 MS.gene047554:CDS
TTTCCATTGAAGCGCCGCCA+GGG 0.615322 2.1:+71568877 None:intergenic
TTGATGTTGATGATATACCT+AGG 0.619737 2.1:-71568554 MS.gene047554:CDS
TTTGAGGATGTCATAACCGA+GGG 0.621237 2.1:-71567262 MS.gene047554:CDS
ACGAGGGAGGACGTTACGAA+TGG 0.622770 2.1:+71568827 None:intergenic
GATGTCAACCACAATAGCGT+CGG 0.624097 2.1:+71567648 None:intergenic
GGTGGAATATTCGCTGCCGA+GGG 0.624227 2.1:-71568795 MS.gene047554:CDS
AAATGAATTGTTCATGTGGG+GGG 0.627111 2.1:+71568988 None:intergenic
TTGTGGTGAAGATGAAGAGA+TGG 0.630262 2.1:+71569148 None:intergenic
CAATGACATCAAGAAGGTAG+GGG 0.631239 2.1:+71567332 None:intergenic
GGCAACACATGCTCTTGATG+CGG 0.634193 2.1:+71567307 None:intergenic
TGACGAGCTTACCAATGGGG+AGG 0.634568 2.1:-71567818 MS.gene047554:CDS
GACTGTTTATGCTAATTATG+CGG 0.636569 2.1:-71568172 MS.gene047554:CDS
GAAATGAATTGTTCATGTGG+GGG 0.638104 2.1:+71568987 None:intergenic
GGAAATGAATTGTTCATGTG+GGG 0.638369 2.1:+71568986 None:intergenic
CACCTTGTTCGTGACGAGGG+AGG 0.638696 2.1:+71568814 None:intergenic
TTTATAGGTACAAGAGACCG+AGG 0.639559 2.1:-71567747 MS.gene047554:CDS
GGAGGAACGAGCGTAACCCT+CGG 0.640818 2.1:+71568779 None:intergenic
TGGTGAAGATGAAGAGATGG+TGG 0.641124 2.1:+71569151 None:intergenic
GTGTTGGACAACATCAGATG+TGG 0.643554 2.1:-71567780 MS.gene047554:CDS
TGGTAGTTTGAATTGTAGCG+AGG 0.644126 2.1:-71568307 MS.gene047554:CDS
AGTACTAGCAACAGGTACAC+CGG 0.645359 2.1:+71568260 None:intergenic
GCGGTACAATGACATCAAGA+AGG 0.647744 2.1:+71567326 None:intergenic
GCTATTGTGGTTGACATCGA+TGG 0.649650 2.1:-71567643 MS.gene047554:CDS
ACTTGGGTATGGTTGTCCAG+TGG 0.649969 2.1:-71567531 MS.gene047554:CDS
GGTAAGTGATTCTGAAAACG+TGG 0.650896 2.1:+71569108 None:intergenic
GTCGAAGCACTTGAACGTCA+GGG 0.655319 2.1:-71568921 MS.gene047554:CDS
AGGGAGGACGTTACGAATGG+CGG 0.657905 2.1:+71568830 None:intergenic
TGACCGGTGATGGCAATAAG+CGG 0.658648 2.1:+71568669 None:intergenic
TCCCCACAAACCGACACATG+AGG 0.664573 2.1:+71568012 None:intergenic
GGTGCTACTAATCTCGTCAG+TGG 0.668110 2.1:-71568720 MS.gene047554:CDS
ACCTGTATAGCATACTGCGG+AGG 0.674124 2.1:+71567844 None:intergenic
CTTTGAGGATGTCATAACCG+AGG 0.677141 2.1:-71567263 MS.gene047554:CDS
GTATATGAATAGGTTACCCA+AGG 0.677418 2.1:-71568406 MS.gene047554:CDS
GACGTTCAAGTGCTTCGACG+AGG 0.680089 2.1:+71568925 None:intergenic
TGTTGGACAACATCAGATGT+GGG 0.692591 2.1:-71567779 MS.gene047554:CDS
AAGTGGCGATGCAGACACCA+GGG 0.695335 2.1:+71568751 None:intergenic
AATGTCTTCGCTTACCCTGG+CGG 0.697805 2.1:-71568891 MS.gene047554:CDS
TCTTGACGAGCTTACCAATG+GGG 0.698334 2.1:-71567821 MS.gene047554:CDS
TCAACAACAATATCTTAACA+GGG 0.698879 2.1:+71567563 None:intergenic
GCAGACACCAGGGAAACCGG+AGG 0.699497 2.1:+71568761 None:intergenic
CTCCCTCGTCACGAACAAGG+TGG 0.705691 2.1:-71568813 MS.gene047554:CDS
TGACGAGATTAGTAGCACCT+GGG 0.711329 2.1:+71568724 None:intergenic
GGAGTTGGCTACTATCAAGG+TGG 0.721822 2.1:-71567593 MS.gene047554:CDS
AGAACCTGTATAGCATACTG+CGG 0.744810 2.1:+71567841 None:intergenic
TCAGTACCAATCATTCTCCG+GGG 0.748029 2.1:+71568642 None:intergenic
ATTGTAGCGAGGAATTGAGG+CGG 0.749278 2.1:-71568296 MS.gene047554:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGAACAAGATAATTATGCT+TGG + chr2.1:71567853-71567872 None:intergenic 25.0%
! TCAAACTTCTTATAACTCAT+CGG + chr2.1:71568551-71568570 None:intergenic 25.0%
! TCAACAACAATATCTTAACA+GGG + chr2.1:71568865-71568884 None:intergenic 25.0%
! TTCAACAACAATATCTTAAC+AGG + chr2.1:71568866-71568885 None:intergenic 25.0%
AACTGAATGATCAGAAAGTT+AGG - chr2.1:71568522-71568541 MS.gene047554:CDS 30.0%
AATATTTCTTTCTCATTGGC+TGG + chr2.1:71568968-71568987 None:intergenic 30.0%
ATAGAGAGTAAGCTTGATTT+CGG - chr2.1:71568485-71568504 MS.gene047554:CDS 30.0%
ATATACCCAGTTAACCTAAT+AGG + chr2.1:71568005-71568024 None:intergenic 30.0%
ATCAACCTATTAGGTTAACT+GGG - chr2.1:71567997-71568016 MS.gene047554:CDS 30.0%
GACTGTTTATGCTAATTATG+CGG - chr2.1:71568253-71568272 MS.gene047554:CDS 30.0%
TTAGGTATATCGATCAAAAC+AGG + chr2.1:71567942-71567961 None:intergenic 30.0%
TTGTTGAACAATCAACACTT+GGG - chr2.1:71568878-71568897 MS.gene047554:CDS 30.0%
! AAGAAACCTGTTTTGTATGT+TGG - chr2.1:71568092-71568111 MS.gene047554:CDS 30.0%
! AAGCTTTATGATGAATGTTC+AGG - chr2.1:71568811-71568830 MS.gene047554:CDS 30.0%
! ATATTTCTTTCTCATTGGCT+GGG + chr2.1:71568967-71568986 None:intergenic 30.0%
!! AATCGAATTTTGGAGAGTAA+TGG - chr2.1:71568461-71568480 MS.gene047554:CDS 30.0%
!! ATCGAATTTTGGAGAGTAAT+GGG - chr2.1:71568462-71568481 MS.gene047554:CDS 30.0%
!! TTGATGTTGATGATATACCT+AGG - chr2.1:71567871-71567890 MS.gene047554:CDS 30.0%
!!! TGTTTTGATCGATATACCTA+AGG - chr2.1:71567941-71567960 MS.gene047554:CDS 30.0%
AAATGAATTGTTCATGTGGG+GGG + chr2.1:71567440-71567459 None:intergenic 35.0%
ACAATGACATCAAGAAGGTA+GGG + chr2.1:71569097-71569116 None:intergenic 35.0%
ACAGATTGTGAGGTTGTTAT+TGG - chr2.1:71568064-71568083 MS.gene047554:CDS 35.0%
ACCTGCAAACTTCAACATAT+TGG + chr2.1:71568993-71569012 None:intergenic 35.0%
ATATTGATGCTGCTGAGATT+GGG - chr2.1:71568378-71568397 MS.gene047554:CDS 35.0%
CCTGCAAACTTCAACATATT+GGG + chr2.1:71568992-71569011 None:intergenic 35.0%
CTGCAAACTTCAACATATTG+GGG + chr2.1:71568991-71569010 None:intergenic 35.0%
GAAATGAATTGTTCATGTGG+GGG + chr2.1:71567441-71567460 None:intergenic 35.0%
GATCAACCTATTAGGTTAAC+TGG - chr2.1:71567996-71568015 MS.gene047554:CDS 35.0%
GATCTAGTTACCTCAACAAT+CGG + chr2.1:71567825-71567844 None:intergenic 35.0%
GGAAATGAATTGTTCATGTG+GGG + chr2.1:71567442-71567461 None:intergenic 35.0%
GGGAAATGAATTGTTCATGT+GGG + chr2.1:71567443-71567462 None:intergenic 35.0%
GGGGAATATTTCTTTCTCAT+TGG + chr2.1:71568972-71568991 None:intergenic 35.0%
GGTTAACTGGGTATATGAAT+AGG - chr2.1:71568009-71568028 MS.gene047554:CDS 35.0%
GTATATGAATAGGTTACCCA+AGG - chr2.1:71568019-71568038 MS.gene047554:CDS 35.0%
GTTGTTGAACAATCAACACT+TGG - chr2.1:71568877-71568896 MS.gene047554:CDS 35.0%
TACAATGACATCAAGAAGGT+AGG + chr2.1:71569098-71569117 None:intergenic 35.0%
TATGATGAATGTTCAGGAGT+TGG - chr2.1:71568817-71568836 MS.gene047554:CDS 35.0%
! AAACCTGTTTTGTATGTTGG+TGG - chr2.1:71568095-71568114 MS.gene047554:CDS 35.0%
!! ATTTGAAGTTGGCTTTGAAG+GGG - chr2.1:71568435-71568454 MS.gene047554:CDS 35.0%
!! CTAATAGGTTGATCCCAATT+CGG + chr2.1:71567990-71568009 None:intergenic 35.0%
!! GATTTGAAGTTGGCTTTGAA+GGG - chr2.1:71568434-71568453 MS.gene047554:CDS 35.0%
!! GCGTTTTTATTAGCTTCTAG+TGG - chr2.1:71567906-71567925 MS.gene047554:CDS 35.0%
!! TGATTCTGAAAACGTGGTTT+TGG + chr2.1:71567314-71567333 None:intergenic 35.0%
!!! TTTTGGTTTGGAAGTGATTG+TGG + chr2.1:71567297-71567316 None:intergenic 35.0%
AACAGGTTTCTGTTCCGAAT+TGG - chr2.1:71567973-71567992 MS.gene047554:CDS 40.0%
AACGAATTCTCATCCGAACT+AGG + chr2.1:71568212-71568231 None:intergenic 40.0%
AACGCTTCATTCACTATCCT+AGG + chr2.1:71567891-71567910 None:intergenic 40.0%
ACAGGTTTCTGTTCCGAATT+GGG - chr2.1:71567974-71567993 MS.gene047554:CDS 40.0%
ACCTAAGGATATTCAGCAAC+AGG - chr2.1:71567956-71567975 MS.gene047554:CDS 40.0%
ACCTGTTGCTAGTACTTTGA+TGG - chr2.1:71568172-71568191 MS.gene047554:CDS 40.0%
ACCTGTTGCTGAATATCCTT+AGG + chr2.1:71567960-71567979 None:intergenic 40.0%
AGAACCTGTATAGCATACTG+CGG + chr2.1:71568587-71568606 None:intergenic 40.0%
AGAATTCGTTGCAGATGCTT+GGG - chr2.1:71568222-71568241 MS.gene047554:CDS 40.0%
ATATCGATCAAAACAGGTCC+AGG + chr2.1:71567936-71567955 None:intergenic 40.0%
ATCAGTACCAATCATTCTCC+GGG + chr2.1:71567787-71567806 None:intergenic 40.0%
ATTCTCATCCGAACTAGGAT+AGG + chr2.1:71568207-71568226 None:intergenic 40.0%
CAATATGAACAATCTTCGCC+CGG + chr2.1:71568358-71568377 None:intergenic 40.0%
CAATGACATCAAGAAGGTAG+GGG + chr2.1:71569096-71569115 None:intergenic 40.0%
CAGAAAATGTTAGATACCCC+TGG - chr2.1:71569070-71569089 MS.gene047554:CDS 40.0%
CATCAGTACCAATCATTCTC+CGG + chr2.1:71567788-71567807 None:intergenic 40.0%
CCCAATATGTTGAAGTTTGC+AGG - chr2.1:71568989-71569008 MS.gene047554:CDS 40.0%
CCTGTTGCTAGTACTTTGAT+GGG - chr2.1:71568173-71568192 MS.gene047554:CDS 40.0%
CGAATTGGGATCAACCTATT+AGG - chr2.1:71567988-71568007 MS.gene047554:CDS 40.0%
CGGGAAATGAATTGTTCATG+TGG + chr2.1:71567444-71567463 None:intergenic 40.0%
CTGTTGCTAGTACTTTGATG+GGG - chr2.1:71568174-71568193 MS.gene047554:CDS 40.0%
GAACAATCAACACTTGGGTA+TGG - chr2.1:71568883-71568902 MS.gene047554:CDS 40.0%
GATATTGATGCTGCTGAGAT+TGG - chr2.1:71568377-71568396 MS.gene047554:CDS 40.0%
GATCCATTTGCAGGAATCAT+TGG + chr2.1:71569142-71569161 None:intergenic 40.0%
TCAAGAAACTCCGATTGTTG+AGG - chr2.1:71567812-71567831 MS.gene047554:CDS 40.0%
TGAATTGTAGCGAGGAATTG+AGG - chr2.1:71568126-71568145 MS.gene047554:CDS 40.0%
TGGTAGTTTGAATTGTAGCG+AGG - chr2.1:71568118-71568137 MS.gene047554:CDS 40.0%
TGTTCCAAATGTGCCTCTTT+CGG + chr2.1:71568047-71568066 None:intergenic 40.0%
TGTTGGACAACATCAGATGT+GGG - chr2.1:71568646-71568665 MS.gene047554:CDS 40.0%
TGTTTGGGGAAGTGGAAAAT+GGG + chr2.1:71567341-71567360 None:intergenic 40.0%
TTCTTGACGAGCTTACCAAT+GGG - chr2.1:71568603-71568622 MS.gene047554:CDS 40.0%
TTGCCAATGATTCCTGCAAA+TGG - chr2.1:71569136-71569155 MS.gene047554:CDS 40.0%
TTGTGGTGAAGATGAAGAGA+TGG + chr2.1:71567280-71567299 None:intergenic 40.0%
TTTATAGGTACAAGAGACCG+AGG - chr2.1:71568678-71568697 MS.gene047554:CDS 40.0%
TTTGAGGATGTCATAACCGA+GGG - chr2.1:71569163-71569182 MS.gene047554:CDS 40.0%
! AGTGATCTTTTGCTTGCGTT+TGG - chr2.1:71568284-71568303 MS.gene047554:CDS 40.0%
! CACATTTGGAACAGATTGTG+AGG - chr2.1:71568054-71568073 MS.gene047554:CDS 40.0%
! GAAGGGGATCAATCGAATTT+TGG - chr2.1:71568451-71568470 MS.gene047554:CDS 40.0%
! GGTAAGTGATTCTGAAAACG+TGG + chr2.1:71567320-71567339 None:intergenic 40.0%
! GTGATCTTTTGCTTGCGTTT+GGG - chr2.1:71568285-71568304 MS.gene047554:CDS 40.0%
! TGATCTTTTGCTTGCGTTTG+GGG - chr2.1:71568286-71568305 MS.gene047554:CDS 40.0%
! TTGGGGTTAGGTTTGATGAT+CGG - chr2.1:71568303-71568322 MS.gene047554:CDS 40.0%
! TTTTCTGAATCGCTGCTCTA+AGG + chr2.1:71569057-71569076 None:intergenic 40.0%
!! AAGCGGAGATTTTGAAAGAG+CGG + chr2.1:71567383-71567402 None:intergenic 40.0%
!! GCTATCATAAGTACTGGTGT+TGG - chr2.1:71568629-71568648 MS.gene047554:CDS 40.0%
!! GGATTTGAAGTTGGCTTTGA+AGG - chr2.1:71568433-71568452 MS.gene047554:CDS 40.0%
!! TGAGTTTGAAGGGAGTGTTT+GGG + chr2.1:71567356-71567375 None:intergenic 40.0%
!! TTGAGTTTGAAGGGAGTGTT+TGG + chr2.1:71567357-71567376 None:intergenic 40.0%
!!! AGTGGTTTTTTGAGTAGGGT+TGG + chr2.1:71567412-71567431 None:intergenic 40.0%
!!! ATGGGAGTGGTTTTTTGAGT+AGG + chr2.1:71567417-71567436 None:intergenic 40.0%
!!! CTGAAAACGTGGTTTTGGTT+TGG + chr2.1:71567309-71567328 None:intergenic 40.0%
!!! TGGGAGTGGTTTTTTGAGTA+GGG + chr2.1:71567416-71567435 None:intergenic 40.0%
!!! TTTTTGAGTAGGGTTGGAGA+TGG + chr2.1:71567406-71567425 None:intergenic 40.0%
AATAGAGCTCACACCTACCT+GGG - chr2.1:71568938-71568957 MS.gene047554:CDS 45.0%
AATTGTTCATGTGGGGGGAT+GGG + chr2.1:71567435-71567454 None:intergenic 45.0%
ACAAATGTCTTCGCTTACCC+TGG - chr2.1:71567531-71567550 MS.gene047554:CDS 45.0%
ACTTATGATAGCCTCCCCAT+TGG + chr2.1:71568621-71568640 None:intergenic 45.0%
AGTACTAGCAACAGGTACAC+CGG + chr2.1:71568168-71568187 None:intergenic 45.0%
ATGTCAACCACAATAGCGTC+GGG + chr2.1:71568779-71568798 None:intergenic 45.0%
ATTGTAGCGAGGAATTGAGG+CGG - chr2.1:71568129-71568148 MS.gene047554:CDS 45.0%
CCACCACCAACATACAAAAC+AGG + chr2.1:71568101-71568120 None:intergenic 45.0%
CTCGGTTATGACATCCTCAA+AGG + chr2.1:71569164-71569183 None:intergenic 45.0%
GAATAAGCAGCCTCATGTGT+CGG - chr2.1:71568403-71568422 MS.gene047554:CDS 45.0%
GAGAATTCGTTGCAGATGCT+TGG - chr2.1:71568221-71568240 MS.gene047554:CDS 45.0%
GAGAGTAAGCTTGATTTCGG+AGG - chr2.1:71568488-71568507 MS.gene047554:CDS 45.0%
GATGTCAACCACAATAGCGT+CGG + chr2.1:71568780-71568799 None:intergenic 45.0%
GCGGTACAATGACATCAAGA+AGG + chr2.1:71569102-71569121 None:intergenic 45.0%
GCTAGTACTTTGATGGGGTT+GGG - chr2.1:71568179-71568198 MS.gene047554:CDS 45.0%
GCTATTGTGGTTGACATCGA+TGG - chr2.1:71568782-71568801 MS.gene047554:CDS 45.0%
GTAAGCTTGATTTCGGAGGT+TGG - chr2.1:71568492-71568511 MS.gene047554:CDS 45.0%
GTGTTGGACAACATCAGATG+TGG - chr2.1:71568645-71568664 MS.gene047554:CDS 45.0%
GTGTTTGGGGAAGTGGAAAA+TGG + chr2.1:71567342-71567361 None:intergenic 45.0%
GTTCTTGACGAGCTTACCAA+TGG - chr2.1:71568602-71568621 MS.gene047554:CDS 45.0%
GTTGGGTTCCTATCCTAGTT+CGG - chr2.1:71568196-71568215 MS.gene047554:CDS 45.0%
TCAGGAGTTGGCTACTATCA+AGG - chr2.1:71568829-71568848 MS.gene047554:CDS 45.0%
TCAGTACCAATCATTCTCCG+GGG + chr2.1:71567786-71567805 None:intergenic 45.0%
TCCTCAAAGGATCCATTTGC+AGG + chr2.1:71569151-71569170 None:intergenic 45.0%
TCCTGCAAATGGATCCTTTG+AGG - chr2.1:71569147-71569166 MS.gene047554:CDS 45.0%
TCTTGACGAGCTTACCAATG+GGG - chr2.1:71568604-71568623 MS.gene047554:CDS 45.0%
TGACGAGATTAGTAGCACCT+GGG + chr2.1:71567704-71567723 None:intergenic 45.0%
TGCTAGTACTTTGATGGGGT+TGG - chr2.1:71568178-71568197 MS.gene047554:CDS 45.0%
TGGTGAAGATGAAGAGATGG+TGG + chr2.1:71567277-71567296 None:intergenic 45.0%
TTAGCTTCTAGTGGTAGACC+TGG - chr2.1:71567915-71567934 MS.gene047554:CDS 45.0%
TTGAAGTTTGCAGGTGCTTG+TGG - chr2.1:71568998-71569017 MS.gene047554:CDS 45.0%
! AGGTTTGATGATCGGGTTAC+TGG - chr2.1:71568311-71568330 MS.gene047554:CDS 45.0%
! CCCATCAAAGTACTAGCAAC+AGG + chr2.1:71568176-71568195 None:intergenic 45.0%
! CTTTGAGGATGTCATAACCG+AGG - chr2.1:71569162-71569181 MS.gene047554:CDS 45.0%
! GGTTTGATGATCGGGTTACT+GGG - chr2.1:71568312-71568331 MS.gene047554:CDS 45.0%
! GGTTTGTGGGGATTTGAAGT+TGG - chr2.1:71568424-71568443 MS.gene047554:CDS 45.0%
! TGGGGTTAGGTTTGATGATC+GGG - chr2.1:71568304-71568323 MS.gene047554:CDS 45.0%
!! AGGCGGTTTGTTGAGTTAAC+CGG - chr2.1:71568146-71568165 MS.gene047554:CDS 45.0%
!! CCTGTTTTGTATGTTGGTGG+TGG - chr2.1:71568098-71568117 MS.gene047554:CDS 45.0%
!! GAGTTTGAAGGGAGTGTTTG+GGG + chr2.1:71567355-71567374 None:intergenic 45.0%
!! TGTGGGCTGCTCAGTTTTAT+AGG - chr2.1:71568663-71568682 MS.gene047554:CDS 45.0%
!! TTTTGCTTGCGTTTGGGGTT+AGG - chr2.1:71568291-71568310 MS.gene047554:CDS 45.0%
AATGTCTTCGCTTACCCTGG+CGG - chr2.1:71567534-71567553 MS.gene047554:CDS 50.0%
ACCTGTATAGCATACTGCGG+AGG + chr2.1:71568584-71568603 None:intergenic 50.0%
ACTTATCCTGCCATCACCCT+CGG + chr2.1:71569182-71569201 None:intergenic 50.0%
ACTTGGGTATGGTTGTCCAG+TGG - chr2.1:71568894-71568913 MS.gene047554:CDS 50.0%
AGAGCGGTGGTTGAGTTTGA+AGG + chr2.1:71567367-71567386 None:intergenic 50.0%
AGTAGGGTTGGAGATGGAAG+CGG + chr2.1:71567400-71567419 None:intergenic 50.0%
ATTCCACCTTGTTCGTGACG+AGG + chr2.1:71567618-71567637 None:intergenic 50.0%
CAATAGAGCTCACACCTACC+TGG - chr2.1:71568937-71568956 MS.gene047554:CDS 50.0%
CAGGTAGGTGTGAGCTCTAT+TGG + chr2.1:71568939-71568958 None:intergenic 50.0%
CGCTATGGGATTTGGATTGC+CGG - chr2.1:71568727-71568746 MS.gene047554:CDS 50.0%
CTGACGAGATTAGTAGCACC+TGG + chr2.1:71567705-71567724 None:intergenic 50.0%
CTTGGGTATGGTTGTCCAGT+GGG - chr2.1:71568895-71568914 MS.gene047554:CDS 50.0%
GAATTGTTCATGTGGGGGGA+TGG + chr2.1:71567436-71567455 None:intergenic 50.0%
GAGCGGTGGTTGAGTTTGAA+GGG + chr2.1:71567366-71567385 None:intergenic 50.0%
GATGTCATAACCGAGGGTGA+TGG - chr2.1:71569169-71569188 MS.gene047554:CDS 50.0%
GGAGTTGGCTACTATCAAGG+TGG - chr2.1:71568832-71568851 MS.gene047554:CDS 50.0%
GGCAACACATGCTCTTGATG+CGG + chr2.1:71569121-71569140 None:intergenic 50.0%
GGGGAGGCTATCATAAGTAC+TGG - chr2.1:71568623-71568642 MS.gene047554:CDS 50.0%
GTGGTTGACATCGATGGTGA+TGG - chr2.1:71568788-71568807 MS.gene047554:CDS 50.0%
GTTCCGCTTATTGCCATCAC+CGG - chr2.1:71567753-71567772 MS.gene047554:CDS 50.0%
TATAGAACCGATCCTCCCAC+TGG + chr2.1:71568913-71568932 None:intergenic 50.0%
TCCTCCGCAGTATGCTATAC+AGG - chr2.1:71568580-71568599 MS.gene047554:CDS 50.0%
TGCAGATGCTTGGGATGCAT+GGG - chr2.1:71568231-71568250 MS.gene047554:CDS 50.0%
TGCAGGTGCTTGTGGTATAC+CGG - chr2.1:71569006-71569025 MS.gene047554:CDS 50.0%
TTCCACCTTGTTCGTGACGA+GGG + chr2.1:71567617-71567636 None:intergenic 50.0%
TTGCAGATGCTTGGGATGCA+TGG - chr2.1:71568230-71568249 MS.gene047554:CDS 50.0%
! AACCACAATAGCGTCGGGAT+TGG + chr2.1:71568774-71568793 None:intergenic 50.0%
! AGGATATCTGCGCCTTTTCG+GGG + chr2.1:71567483-71567502 None:intergenic 50.0%
! CGAGGATATCTGCGCCTTTT+CGG + chr2.1:71567485-71567504 None:intergenic 50.0%
! GAGGATATCTGCGCCTTTTC+GGG + chr2.1:71567484-71567503 None:intergenic 50.0%
! GTCGAAGCACTTGAACGTCA+GGG - chr2.1:71567504-71567523 MS.gene047554:CDS 50.0%
! TGACCGGTGATGGCAATAAG+CGG + chr2.1:71567759-71567778 None:intergenic 50.0%
! TGGTTGACTTCTGCTGGTCT+TGG - chr2.1:71568704-71568723 MS.gene047554:CDS 50.0%
!! AGCCTCATGTGTCGGTTTGT+GGG - chr2.1:71568411-71568430 MS.gene047554:CDS 50.0%
!! CGGAGATTTTGAAAGAGCGG+TGG + chr2.1:71567380-71567399 None:intergenic 50.0%
!! GGTGCTACTAATCTCGTCAG+TGG - chr2.1:71567705-71567724 MS.gene047554:CDS 50.0%
AAGTGGCGATGCAGACACCA+GGG + chr2.1:71567677-71567696 None:intergenic 55.0%
ACATCAAGAAGGTAGGGGCC+AGG + chr2.1:71569091-71569110 None:intergenic 55.0%
ACGAGGGAGGACGTTACGAA+TGG + chr2.1:71567601-71567620 None:intergenic 55.0%
AGGGAGGACGTTACGAATGG+CGG + chr2.1:71567598-71567617 None:intergenic 55.0%
AGGTGGAATATTCGCTGCCG+AGG - chr2.1:71567629-71567648 MS.gene047554:CDS 55.0%
ATCAAGAAGGTAGGGGCCAG+GGG + chr2.1:71569089-71569108 None:intergenic 55.0%
ATTGGCAACAGCAGCTCCCA+TGG + chr2.1:71568756-71568775 None:intergenic 55.0%
CAGGTTCCCCGGAGAATGAT+TGG - chr2.1:71567777-71567796 MS.gene047554:CDS 55.0%
CATCAAGAAGGTAGGGGCCA+GGG + chr2.1:71569090-71569109 None:intergenic 55.0%
CTCTTTGTCACACGAGCTGC+CGG + chr2.1:71569028-71569047 None:intergenic 55.0%
GACGTTCAAGTGCTTCGACG+AGG + chr2.1:71567503-71567522 None:intergenic 55.0%
GAGATTAGTAGCACCTGGGC+CGG + chr2.1:71567700-71567719 None:intergenic 55.0%
GATGCAGACACCAGGGAAAC+CGG + chr2.1:71567670-71567689 None:intergenic 55.0%
GCAGAAGTCAACCACTGCCT+CGG + chr2.1:71568698-71568717 None:intergenic 55.0%
GCTTATTGCCATCACCGGTC+AGG - chr2.1:71567758-71567777 MS.gene047554:CDS 55.0%
GGCAGCTCGTGTGACAAAGA+GGG - chr2.1:71569027-71569046 MS.gene047554:CDS 55.0%
GGGGTTCGTTAGGGGCAAAT+CGG + chr2.1:71567464-71567483 None:intergenic 55.0%
GGGTTCGTTAGGGGCAAATC+GGG + chr2.1:71567463-71567482 None:intergenic 55.0%
GGTCTTGGCGCTATGGGATT+TGG - chr2.1:71568719-71568738 MS.gene047554:CDS 55.0%
GGTGGAATATTCGCTGCCGA+GGG - chr2.1:71567630-71567649 MS.gene047554:CDS 55.0%
TCCCCACAAACCGACACATG+AGG + chr2.1:71568416-71568435 None:intergenic 55.0%
TCGGGTTACTGGGAAGCTTG+AGG - chr2.1:71568322-71568341 MS.gene047554:CDS 55.0%
TGACGAGCTTACCAATGGGG+AGG - chr2.1:71568607-71568626 MS.gene047554:CDS 55.0%
TGCCAATCCCGACGCTATTG+TGG - chr2.1:71568769-71568788 MS.gene047554:CDS 55.0%
TGGTTGTCCAGTGGGAGGAT+CGG - chr2.1:71568903-71568922 MS.gene047554:CDS 55.0%
! AGAGATGGTGGTCGTGAACG+CGG + chr2.1:71567265-71567284 None:intergenic 55.0%
! AGCTTGAGGCTTTTGCGAGC+CGG - chr2.1:71568336-71568355 MS.gene047554:CDS 55.0%
! AGGCAGTGGTTGACTTCTGC+TGG - chr2.1:71568698-71568717 MS.gene047554:CDS 55.0%
! ATTTGGATTGCCGGCTGCCA+TGG - chr2.1:71568736-71568755 MS.gene047554:CDS 55.0%
! CGTCGAAGCACTTGAACGTC+AGG - chr2.1:71567503-71567522 MS.gene047554:CDS 55.0%
! GAACGCGGTTTTTGCAGCAG+TGG + chr2.1:71567250-71567269 None:intergenic 55.0%
! GGCACCGAAAGAGGCACATT+TGG - chr2.1:71568040-71568059 MS.gene047554:CDS 55.0%
! TCATAACCGAGGGTGATGGC+AGG - chr2.1:71569173-71569192 MS.gene047554:CDS 55.0%
! TTTGGATTGCCGGCTGCCAT+GGG - chr2.1:71568737-71568756 MS.gene047554:CDS 55.0%
!! ATGTGCCTCTTTCGGTGCCT+TGG + chr2.1:71568039-71568058 None:intergenic 55.0%
!! ATTTCCATTGAAGCGCCGCC+AGG + chr2.1:71567552-71567571 None:intergenic 55.0%
!! CAGCCTCATGTGTCGGTTTG+TGG - chr2.1:71568410-71568429 MS.gene047554:CDS 55.0%
!! CGCCTTTTCGGGGTTCGTTA+GGG + chr2.1:71567473-71567492 None:intergenic 55.0%
!! GAAGGGAGTGTTTGGGGAAG+TGG + chr2.1:71567349-71567368 None:intergenic 55.0%
!! GCCTCATGTGTCGGTTTGTG+GGG - chr2.1:71568412-71568431 MS.gene047554:CDS 55.0%
!! GCCTTTTCGGGGTTCGTTAG+GGG + chr2.1:71567472-71567491 None:intergenic 55.0%
!! GTTACCCAAGGCACCGAAAG+AGG - chr2.1:71568031-71568050 MS.gene047554:CDS 55.0%
!! TCTGCTGGTCTTGGCGCTAT+GGG - chr2.1:71568713-71568732 MS.gene047554:CDS 55.0%
!! TGTGCCTCTTTCGGTGCCTT+GGG + chr2.1:71568038-71568057 None:intergenic 55.0%
!! TTCTGCTGGTCTTGGCGCTA+TGG - chr2.1:71568712-71568731 MS.gene047554:CDS 55.0%
!! TTTCCATTGAAGCGCCGCCA+GGG + chr2.1:71567551-71567570 None:intergenic 55.0%
ATTGGCTGGGTCTCCCAGGT+AGG + chr2.1:71568954-71568973 None:intergenic 60.0%
CACCTTGTTCGTGACGAGGG+AGG + chr2.1:71567614-71567633 None:intergenic 60.0%
CATTCTCCGGGGAACCTGAC+CGG + chr2.1:71567775-71567794 None:intergenic 60.0%
CGGCAGCTCGTGTGACAAAG+AGG - chr2.1:71569026-71569045 MS.gene047554:CDS 60.0%
CTCCCTCGTCACGAACAAGG+TGG - chr2.1:71567612-71567631 MS.gene047554:CDS 60.0%
GAAGTGGCGATGCAGACACC+AGG + chr2.1:71567678-71567697 None:intergenic 60.0%
GAGGACGTTACGAATGGCGG+TGG + chr2.1:71567595-71567614 None:intergenic 60.0%
GAGGGTTACGCTCGTTCCTC+CGG - chr2.1:71567648-71567667 MS.gene047554:CDS 60.0%
GCCCCTAACGAACCCCGAAA+AGG - chr2.1:71567468-71567487 MS.gene047554:CDS 60.0%
GGAGGAACGAGCGTAACCCT+CGG + chr2.1:71567649-71567668 None:intergenic 60.0%
GGGTATGGTTGTCCAGTGGG+AGG - chr2.1:71568898-71568917 MS.gene047554:CDS 60.0%
GGTACAAGAGACCGAGGCAG+TGG - chr2.1:71568684-71568703 MS.gene047554:CDS 60.0%
GGTGTCTGCATCGCCACTTC+CGG - chr2.1:71567678-71567697 MS.gene047554:CDS 60.0%
GTCCTCCCTCGTCACGAACA+AGG - chr2.1:71567609-71567628 MS.gene047554:CDS 60.0%
TTACCCTGGCGGCGCTTCAA+TGG - chr2.1:71567545-71567564 MS.gene047554:CDS 60.0%
TTCATGTGGGGGGATGGGAG+TGG + chr2.1:71567430-71567449 None:intergenic 60.0%
! GCTTGAGGCTTTTGCGAGCC+GGG - chr2.1:71568337-71568356 MS.gene047554:CDS 60.0%
! TCTCATTGGCTGGGTCTCCC+AGG + chr2.1:71568958-71568977 None:intergenic 60.0%
!! GCGCCTTTTCGGGGTTCGTT+AGG + chr2.1:71567474-71567493 None:intergenic 60.0%
ACAGCAGCTCCCATGGCAGC+CGG + chr2.1:71568749-71568768 None:intergenic 65.0%
AGTAGCACCTGGGCCGGAAG+TGG + chr2.1:71567694-71567713 None:intergenic 65.0%
CCATCACCGGTCAGGTTCCC+CGG - chr2.1:71567766-71567785 MS.gene047554:CDS 65.0%
GCAGACACCAGGGAAACCGG+AGG + chr2.1:71567667-71567686 None:intergenic 65.0%
GCTCGTTCCTCCGGTTTCCC+TGG - chr2.1:71567657-71567676 MS.gene047554:CDS 65.0%
CCGGGGAACCTGACCGGTGA+TGG + chr2.1:71567769-71567788 None:intergenic 70.0%
TGCATCGCCACTTCCGGCCC+AGG - chr2.1:71567684-71567703 MS.gene047554:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 71567240 71569207 71567240 ID=MS.gene047554
chr2.1 mRNA 71567240 71569207 71567240 ID=MS.gene047554.t1;Parent=MS.gene047554
chr2.1 exon 71567240 71569207 71567240 ID=MS.gene047554.t1.exon1;Parent=MS.gene047554.t1
chr2.1 CDS 71567240 71569207 71567240 ID=cds.MS.gene047554.t1;Parent=MS.gene047554.t1
Gene Sequence

>MS.gene047554

ATGGCAGCCACTGCTGCAAAAACCGCGTTCACGACCACCATCTCTTCATCTTCACCACAATCACTTCCAAACCAAAACCACGTTTTCAGAATCACTTACCCATTTTCCACTTCCCCAAACACTCCCTTCAAACTCAACCACCGCTCTTTCAAAATCTCCGCTTCCATCTCCAACCCTACTCAAAAAACCACTCCCATCCCCCCACATGAACAATTCATTTCCCGATTTGCCCCTAACGAACCCCGAAAAGGCGCAGATATCCTCGTCGAAGCACTTGAACGTCAGGGAGTTACAAATGTCTTCGCTTACCCTGGCGGCGCTTCAATGGAAATTCATCAAGCACTCACGCGCTCCACCGCCATTCGTAACGTCCTCCCTCGTCACGAACAAGGTGGAATATTCGCTGCCGAGGGTTACGCTCGTTCCTCCGGTTTCCCTGGTGTCTGCATCGCCACTTCCGGCCCAGGTGCTACTAATCTCGTCAGTGGACTTGCTGATGCTATGCTTGACAGTGTTCCGCTTATTGCCATCACCGGTCAGGTTCCCCGGAGAATGATTGGTACTGATGCTTTTCAAGAAACTCCGATTGTTGAGGTAACTAGATCAATCACCAAGCATAATTATCTTGTTCTTGATGTTGATGATATACCTAGGATAGTGAATGAAGCGTTTTTATTAGCTTCTAGTGGTAGACCTGGACCTGTTTTGATCGATATACCTAAGGATATTCAGCAACAGGTTTCTGTTCCGAATTGGGATCAACCTATTAGGTTAACTGGGTATATGAATAGGTTACCCAAGGCACCGAAAGAGGCACATTTGGAACAGATTGTGAGGTTGTTATTGGAGTCTAAGAAACCTGTTTTGTATGTTGGTGGTGGTAGTTTGAATTGTAGCGAGGAATTGAGGCGGTTTGTTGAGTTAACCGGTGTACCTGTTGCTAGTACTTTGATGGGGTTGGGTTCCTATCCTAGTTCGGATGAGAATTCGTTGCAGATGCTTGGGATGCATGGGACTGTTTATGCTAATTATGCGGTTGATAAGAGTGATCTTTTGCTTGCGTTTGGGGTTAGGTTTGATGATCGGGTTACTGGGAAGCTTGAGGCTTTTGCGAGCCGGGCGAAGATTGTTCATATTGATATTGATGCTGCTGAGATTGGGAAGAATAAGCAGCCTCATGTGTCGGTTTGTGGGGATTTGAAGTTGGCTTTGAAGGGGATCAATCGAATTTTGGAGAGTAATGGGATAGAGAGTAAGCTTGATTTCGGAGGTTGGAGAGAAGAACTGAATGATCAGAAAGTTAGGTTTCCGATGAGTTATAAGAAGTTTGATGAAGCTATTCCTCCGCAGTATGCTATACAGGTTCTTGACGAGCTTACCAATGGGGAGGCTATCATAAGTACTGGTGTTGGACAACATCAGATGTGGGCTGCTCAGTTTTATAGGTACAAGAGACCGAGGCAGTGGTTGACTTCTGCTGGTCTTGGCGCTATGGGATTTGGATTGCCGGCTGCCATGGGAGCTGCTGTTGCCAATCCCGACGCTATTGTGGTTGACATCGATGGTGATGGAAGCTTTATGATGAATGTTCAGGAGTTGGCTACTATCAAGGTGGAGAATCTCCCTGTTAAGATATTGTTGTTGAACAATCAACACTTGGGTATGGTTGTCCAGTGGGAGGATCGGTTCTATAAAGCCAATAGAGCTCACACCTACCTGGGAGACCCAGCCAATGAGAAAGAAATATTCCCCAATATGTTGAAGTTTGCAGGTGCTTGTGGTATACCGGCAGCTCGTGTGACAAAGAGGGCAGACCTTAGAGCAGCGATTCAGAAAATGTTAGATACCCCTGGCCCCTACCTTCTTGATGTCATTGTACCGCATCAAGAGCATGTGTTGCCAATGATTCCTGCAAATGGATCCTTTGAGGATGTCATAACCGAGGGTGATGGCAGGATAAGTTACTGA

Protein sequence

>MS.gene047554.t1

MAATAAKTAFTTTISSSSPQSLPNQNHVFRITYPFSTSPNTPFKLNHRSFKISASISNPTQKTTPIPPHEQFISRFAPNEPRKGADILVEALERQGVTNVFAYPGGASMEIHQALTRSTAIRNVLPRHEQGGIFAAEGYARSSGFPGVCIATSGPGATNLVSGLADAMLDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRIVNEAFLLASSGRPGPVLIDIPKDIQQQVSVPNWDQPIRLTGYMNRLPKAPKEAHLEQIVRLLLESKKPVLYVGGGSLNCSEELRRFVELTGVPVASTLMGLGSYPSSDENSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDAAEIGKNKQPHVSVCGDLKLALKGINRILESNGIESKLDFGGWREELNDQKVRFPMSYKKFDEAIPPQYAIQVLDELTNGEAIISTGVGQHQMWAAQFYRYKRPRQWLTSAGLGAMGFGLPAAMGAAVANPDAIVVDIDGDGSFMMNVQELATIKVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPANEKEIFPNMLKFAGACGIPAARVTKRADLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPANGSFEDVITEGDGRISY