AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047750.t1 MTR_5g019580 91.075 493 44 0 1 493 1 493 0.0 940
MS.gene047750.t1 MTR_5g019580 85.801 493 42 1 1 493 53 517 0.0 869
MS.gene047750.t1 MTR_8g074550 46.201 487 239 12 6 476 7 486 3.04e-138 408
MS.gene047750.t1 MTR_0078s0010 41.116 484 262 13 2 479 1 467 2.16e-108 330
MS.gene047750.t1 MTR_7g117170 40.466 472 260 10 9 475 17 472 2.93e-107 328
MS.gene047750.t1 MTR_8g027885 40.299 469 257 11 10 475 21 469 5.52e-107 327
MS.gene047750.t1 MTR_8g027870 39.316 468 263 9 10 475 21 469 9.49e-106 324
MS.gene047750.t1 MTR_7g047030 39.212 482 274 11 2 479 1 467 7.18e-104 319
MS.gene047750.t1 MTR_7g047270 39.212 482 274 11 2 479 1 467 7.18e-104 319
MS.gene047750.t1 MTR_0078s0060 39.876 484 269 13 2 480 1 467 2.46e-102 315
MS.gene047750.t1 MTR_8g009055 38.285 478 276 12 2 475 1 463 9.17e-102 313
MS.gene047750.t1 MTR_8g006710 36.777 484 274 13 2 475 1 462 1.54e-100 310
MS.gene047750.t1 MTR_0184s0040 38.923 483 277 11 2 481 16 483 2.59e-100 310
MS.gene047750.t1 MTR_0078s0190 38.923 483 277 11 2 481 16 483 2.59e-100 310
MS.gene047750.t1 MTR_8g008990 37.917 480 277 12 2 475 1 465 6.53e-100 308
MS.gene047750.t1 MTR_8g006730 36.983 484 274 13 2 475 1 463 1.01e-99 308
MS.gene047750.t1 MTR_6g023665 36.214 486 285 12 2 481 8 474 3.56e-98 304
MS.gene047750.t1 MTR_8g009073 36.117 479 283 11 2 475 1 461 1.11e-96 300
MS.gene047750.t1 MTR_6g488280 35.908 479 284 11 2 475 1 461 2.79e-96 299
MS.gene047750.t1 MTR_0428s0010 35.908 479 284 11 2 475 1 461 2.79e-96 299
MS.gene047750.t1 MTR_8g009050 37.526 477 281 10 2 475 1 463 3.45e-96 299
MS.gene047750.t1 MTR_8g006270 38.330 467 268 14 4 467 3 452 5.07e-95 296
MS.gene047750.t1 MTR_1g019510 35.185 486 295 10 2 484 1 469 2.41e-92 289
MS.gene047750.t1 MTR_7g046490 35.565 478 284 14 2 474 1 459 9.99e-89 280
MS.gene047750.t1 MTR_8g009067 35.456 471 285 9 7 474 6 460 1.24e-88 279
MS.gene047750.t1 MTR_8g009063 35.010 477 293 8 1 474 7 469 2.07e-88 279
MS.gene047750.t1 MTR_0184s0030 34.568 486 292 11 2 479 1 468 5.72e-88 278
MS.gene047750.t1 MTR_8g006260 34.864 479 288 12 5 475 4 466 6.00e-88 278
MS.gene047750.t1 MTR_8g012635 34.232 482 295 10 2 475 1 468 3.11e-87 276
MS.gene047750.t1 MTR_8g465670 34.686 493 276 16 1 474 1 466 1.16e-86 275
MS.gene047750.t1 MTR_6g005600 35.146 478 294 8 5 479 4 468 2.98e-85 271
MS.gene047750.t1 MTR_8g077590 34.664 476 285 13 6 475 8 463 8.05e-85 270
MS.gene047750.t1 MTR_8g012650 34.029 479 292 11 2 471 1 464 8.30e-85 270
MS.gene047750.t1 MTR_8g008970 35.208 480 286 11 2 475 1 461 7.73e-83 273
MS.gene047750.t1 MTR_8g008970 37.102 283 145 6 196 474 531 784 2.41e-46 172
MS.gene047750.t1 MTR_8g012745 34.672 473 286 10 2 467 1 457 6.29e-82 262
MS.gene047750.t1 MTR_8g009073 38.663 344 197 6 134 475 1 332 5.49e-79 250
MS.gene047750.t1 MTR_8g006220 34.511 481 261 17 2 455 1 454 5.52e-79 254
MS.gene047750.t1 MTR_6g033625 33.200 500 267 12 5 476 2 462 5.80e-79 254
MS.gene047750.t1 MTR_3g009510 33.939 495 297 11 4 483 2 481 9.39e-78 251
MS.gene047750.t1 MTR_8g009067 36.857 350 211 4 125 474 3 342 2.04e-75 241
MS.gene047750.t1 MTR_6g033725 34.461 473 276 11 5 467 2 450 3.75e-75 244
MS.gene047750.t1 MTR_8g012630 34.810 474 231 13 2 467 1 404 5.10e-75 242
MS.gene047750.t1 MTR_6g033615 33.471 484 273 11 5 476 2 448 4.43e-71 233
MS.gene047750.t1 MTR_6g033660 34.755 469 274 10 9 467 6 452 1.54e-70 233
MS.gene047750.t1 MTR_6g033675 32.489 474 287 9 5 467 2 453 3.34e-68 226
MS.gene047750.t1 MTR_8g012730 37.217 309 166 3 147 454 3 284 8.34e-67 218
MS.gene047750.t1 MTR_5g098930 31.470 483 286 15 4 468 2 457 1.23e-66 222
MS.gene047750.t1 MTR_5g090630 31.622 487 290 14 4 474 2 461 4.92e-66 220
MS.gene047750.t1 MTR_5g090700 32.649 487 284 17 4 468 2 466 1.11e-65 220
MS.gene047750.t1 MTR_2g040530 31.846 493 284 16 5 477 3 463 5.42e-64 215
MS.gene047750.t1 MTR_5g090670 31.992 497 286 17 4 474 2 472 2.40e-62 211
MS.gene047750.t1 MTR_5g090580 31.263 483 292 16 4 467 2 463 5.95e-62 210
MS.gene047750.t1 MTR_2g046820 31.489 470 260 13 5 449 3 435 1.45e-61 208
MS.gene047750.t1 MTR_5g090620 31.237 493 294 16 4 474 2 471 1.53e-61 209
MS.gene047750.t1 MTR_5g090610 29.752 484 298 12 4 474 2 456 1.99e-61 208
MS.gene047750.t1 MTR_5g090660 30.159 504 303 17 4 486 2 477 8.83e-60 206
MS.gene047750.t1 MTR_1g019520 45.455 220 115 2 265 484 4 218 1.74e-59 195
MS.gene047750.t1 MTR_5g090600 31.601 481 272 16 4 467 2 442 5.18e-59 201
MS.gene047750.t1 MTR_5g070090 30.629 493 287 18 2 477 6 460 8.13e-59 201
MS.gene047750.t1 MTR_2g046750 30.550 491 294 16 5 477 3 464 1.15e-57 198
MS.gene047750.t1 MTR_5g070040 31.027 477 260 18 2 449 6 442 2.89e-56 194
MS.gene047750.t1 MTR_5g087620 32.184 522 266 18 4 477 7 488 1.45e-52 185
MS.gene047750.t1 MTR_4g485630 30.495 505 284 22 3 477 5 472 7.80e-48 172
MS.gene047750.t1 MTR_0009s0240 30.063 479 259 19 1 450 1 432 4.21e-45 164
MS.gene047750.t1 MTR_2g098430 29.184 490 269 18 2 455 1 448 6.01e-45 164
MS.gene047750.t1 MTR_4g082820 28.974 497 296 16 1 476 1 461 5.16e-44 161
MS.gene047750.t1 MTR_8g066610 29.207 517 293 16 3 484 5 483 1.21e-43 161
MS.gene047750.t1 MTR_6g014250 25.636 511 308 14 1 477 4 476 3.14e-43 159
MS.gene047750.t1 MTR_7g070660 35.106 282 152 7 211 479 217 480 5.03e-43 159
MS.gene047750.t1 MTR_8g090095 37.500 240 137 5 210 447 220 448 6.25e-43 159
MS.gene047750.t1 MTR_1g029540 38.028 213 123 3 242 454 232 435 1.80e-42 157
MS.gene047750.t1 MTR_5g045960 28.711 512 296 18 3 477 5 484 2.32e-42 157
MS.gene047750.t1 MTR_4g064987 28.773 497 277 20 1 476 1 441 3.55e-42 156
MS.gene047750.t1 MTR_4g094220 27.647 510 291 18 1 471 1 471 3.63e-42 157
MS.gene047750.t1 MTR_7g102490 29.014 517 295 20 1 477 1 485 6.54e-42 156
MS.gene047750.t1 MTR_5g464760 28.287 502 280 19 4 467 9 468 7.70e-42 155
MS.gene047750.t1 MTR_4g008630 39.437 213 119 4 242 454 236 438 9.36e-42 155
MS.gene047750.t1 MTR_4g031800 28.287 502 278 18 17 483 19 473 1.71e-41 155
MS.gene047750.t1 MTR_4g485640 28.373 504 286 19 8 478 210 671 2.19e-41 157
MS.gene047750.t1 MTR_7g070800 26.984 504 294 20 7 474 6 471 3.26e-41 154
MS.gene047750.t1 MTR_6g038240 28.571 504 280 18 3 480 7 456 3.50e-41 154
MS.gene047750.t1 MTR_3g009490 40.212 189 105 3 291 476 3 186 3.79e-41 146
MS.gene047750.t1 MTR_8g466240 28.743 501 275 15 5 477 6 452 4.77e-41 153
MS.gene047750.t1 MTR_8g064870 26.531 490 309 14 9 477 13 472 6.39e-41 153
MS.gene047750.t1 MTR_6g014220 26.419 511 304 16 1 477 4 476 8.17e-41 153
MS.gene047750.t1 MTR_7g070810 37.662 231 117 4 261 479 261 476 8.26e-41 153
MS.gene047750.t1 MTR_6g038300 27.273 495 291 15 7 480 11 457 8.58e-41 152
MS.gene047750.t1 MTR_8g009840 43.386 189 103 2 286 474 337 521 1.52e-40 153
MS.gene047750.t1 MTR_4g064987 28.373 504 276 21 1 476 1 447 2.93e-40 151
MS.gene047750.t1 MTR_7g011470 27.811 507 292 17 1 480 4 463 4.17e-40 150
MS.gene047750.t1 MTR_7g011470 28.261 506 289 18 1 477 4 464 5.02e-40 150
MS.gene047750.t1 MTR_1g107350 26.316 494 312 15 7 478 8 471 5.08e-40 150
MS.gene047750.t1 MTR_3g008010 26.527 524 301 19 1 485 4 482 5.89e-40 150
MS.gene047750.t1 MTR_7g070860 26.667 510 286 18 1 474 1 458 8.34e-40 150
MS.gene047750.t1 MTR_7g070940 35.036 274 148 6 211 474 215 468 1.07e-39 150
MS.gene047750.t1 MTR_3g069710 35.439 285 145 8 195 471 190 443 1.70e-39 149
MS.gene047750.t1 MTR_4g024020 27.096 513 301 15 5 477 7 486 1.89e-39 149
MS.gene047750.t1 MTR_6g014170 27.593 511 296 19 1 484 4 467 2.17e-39 149
MS.gene047750.t1 MTR_0891s0010 30.717 293 172 8 200 486 27 294 3.32e-39 144
MS.gene047750.t1 MTR_6g013990 33.673 294 156 8 197 480 215 479 3.35e-39 148
MS.gene047750.t1 MTR_7g055710 28.709 519 279 20 1 471 1 476 3.39e-39 149
MS.gene047750.t1 MTR_8g059425 25.933 509 317 14 4 484 7 483 6.93e-39 147
MS.gene047750.t1 MTR_6g014290 24.655 507 318 14 1 477 4 476 9.82e-39 147
MS.gene047750.t1 MTR_5g072830 27.160 486 291 18 7 477 10 447 1.08e-38 146
MS.gene047750.t1 MTR_1g032490 25.567 485 322 11 7 477 10 469 2.36e-38 146
MS.gene047750.t1 MTR_5g464810 28.094 509 286 19 6 477 11 476 3.37e-38 145
MS.gene047750.t1 MTR_5g064240 28.094 509 286 19 6 477 11 476 3.37e-38 145
MS.gene047750.t1 MTR_3g479520 27.413 518 288 19 2 477 10 481 3.83e-38 145
MS.gene047750.t1 MTR_6g038200 27.463 477 260 18 7 454 11 430 6.88e-38 144
MS.gene047750.t1 MTR_3g049970 25.866 491 313 13 7 477 9 468 7.62e-38 145
MS.gene047750.t1 MTR_2g008210 26.953 512 302 19 3 481 7 479 7.96e-38 144
MS.gene047750.t1 MTR_7g102550 35.986 289 142 9 207 474 214 480 7.99e-38 145
MS.gene047750.t1 MTR_6g014040 26.990 515 295 20 3 477 6 479 8.44e-38 144
MS.gene047750.t1 MTR_6g038230 28.630 489 255 18 7 463 11 437 1.01e-37 144
MS.gene047750.t1 MTR_5g058320 26.295 502 309 15 1 480 4 466 1.05e-37 144
MS.gene047750.t1 MTR_0036s0220 27.381 504 294 19 7 477 12 476 1.11e-37 144
MS.gene047750.t1 MTR_4g485590 39.367 221 104 5 201 413 181 379 1.92e-37 142
MS.gene047750.t1 MTR_5g035580 28.221 489 278 17 3 470 9 445 1.94e-37 143
MS.gene047750.t1 MTR_7g012120 33.108 296 162 9 206 479 209 490 2.07e-37 144
MS.gene047750.t1 MTR_3g479490 27.789 511 289 22 2 474 1 469 2.24e-37 143
MS.gene047750.t1 MTR_5g035560 27.386 482 291 13 3 470 7 443 2.62e-37 144
MS.gene047750.t1 MTR_6g014050 32.441 299 159 10 197 484 218 484 3.77e-37 143
MS.gene047750.t1 MTR_7g070740 26.305 498 314 17 4 474 8 479 3.99e-37 143
MS.gene047750.t1 MTR_8g064880 27.632 456 273 15 9 438 11 435 6.71e-37 142
MS.gene047750.t1 MTR_7g070930 26.818 440 258 13 3 413 10 414 6.95e-37 142
MS.gene047750.t1 MTR_4g128690 28.690 481 287 16 7 476 15 450 8.07e-37 141
MS.gene047750.t1 MTR_4g117890 26.775 493 275 18 17 471 23 467 8.35e-37 142
MS.gene047750.t1 MTR_0078s0200 29.814 322 205 8 2 315 1 309 9.91e-37 138
MS.gene047750.t1 MTR_4g128720 26.708 483 303 13 4 476 12 453 1.09e-36 141
MS.gene047750.t1 MTR_7g071040 26.265 514 297 16 3 474 13 486 1.29e-36 142
MS.gene047750.t1 MTR_7g070780 26.550 516 300 18 1 474 1 479 1.34e-36 141
MS.gene047750.t1 MTR_6g038220 27.835 485 263 17 7 463 11 436 1.37e-36 140
MS.gene047750.t1 MTR_1g107315 25.692 506 317 17 5 484 6 478 1.40e-36 141
MS.gene047750.t1 MTR_8g083290 28.600 493 285 16 7 471 3 456 1.66e-36 140
MS.gene047750.t1 MTR_4g108250 26.415 530 279 16 3 474 7 483 2.07e-36 141
MS.gene047750.t1 MTR_8g071070 28.041 485 285 17 1 457 1 449 2.16e-36 140
MS.gene047750.t1 MTR_6g013450 26.901 513 300 19 5 480 8 482 2.66e-36 140
MS.gene047750.t1 MTR_4g117960 25.941 505 298 22 10 477 14 479 2.96e-36 140
MS.gene047750.t1 MTR_1g107360 26.283 487 284 16 9 467 11 450 3.71e-36 140
MS.gene047750.t1 MTR_6g014200 28.488 516 289 23 1 477 1 475 5.24e-36 139
MS.gene047750.t1 MTR_6g014020 26.357 516 314 17 1 485 4 484 6.38e-36 139
MS.gene047750.t1 MTR_7g102460 27.626 514 304 20 1 477 1 483 8.25e-36 139
MS.gene047750.t1 MTR_1g062380 26.376 527 282 16 7 477 16 492 9.29e-36 139
MS.gene047750.t1 MTR_7g470610 37.607 234 111 7 211 431 74 285 9.43e-36 135
MS.gene047750.t1 MTR_7g070583 37.607 234 111 7 211 431 74 285 9.43e-36 135
MS.gene047750.t1 MTR_4g082810 37.321 209 114 5 200 405 201 395 9.49e-36 137
MS.gene047750.t1 MTR_2g034990 27.877 391 235 13 110 477 114 480 9.78e-36 139
MS.gene047750.t1 MTR_7g013240 26.190 462 284 15 7 457 6 421 1.01e-35 138
MS.gene047750.t1 MTR_0536s0020 26.190 504 282 20 17 480 28 481 1.17e-35 139
MS.gene047750.t1 MTR_7g070610 33.688 282 151 9 211 474 219 482 1.38e-35 139
MS.gene047750.t1 MTR_6g014270 26.679 521 308 19 1 484 1 484 1.82e-35 138
MS.gene047750.t1 MTR_7g013200 34.123 211 115 6 244 452 228 416 2.10e-35 137
MS.gene047750.t1 MTR_7g117405 28.400 500 297 19 7 477 12 479 2.24e-35 138
MS.gene047750.t1 MTR_1g107285 24.748 497 306 14 9 479 10 464 2.52e-35 137
MS.gene047750.t1 MTR_3g479610 30.357 280 153 8 211 477 61 311 2.96e-35 134
MS.gene047750.t1 MTR_6g013920 30.284 317 180 7 173 477 190 477 3.03e-35 137
MS.gene047750.t1 MTR_3g079480 27.397 511 295 21 3 477 17 487 3.64e-35 137
MS.gene047750.t1 MTR_4g094920 32.955 264 147 6 241 492 246 491 4.30e-35 137
MS.gene047750.t1 MTR_1g107375 25.755 497 291 15 7 477 8 452 4.47e-35 136
MS.gene047750.t1 MTR_6g013900 30.284 317 180 9 173 477 190 477 4.63e-35 137
MS.gene047750.t1 MTR_4g095008 27.733 375 231 9 114 474 112 460 6.30e-35 137
MS.gene047750.t1 MTR_6g035265 27.930 401 237 13 107 483 106 478 6.61e-35 136
MS.gene047750.t1 MTR_5g016660 37.339 233 122 5 255 478 266 483 6.75e-35 137
MS.gene047750.t1 MTR_6g013960 25.941 505 310 17 4 477 7 478 9.23e-35 136
MS.gene047750.t1 MTR_7g013260 25.108 462 290 15 7 457 6 422 1.20e-34 135
MS.gene047750.t1 MTR_5g027210 32.806 253 147 3 205 442 206 450 1.20e-34 136
MS.gene047750.t1 MTR_0288s0020 25.098 510 295 18 1 477 4 459 1.27e-34 135
MS.gene047750.t1 MTR_6g013440 26.744 516 300 21 3 480 7 482 1.27e-34 135
MS.gene047750.t1 MTR_4g117950 29.188 394 211 16 110 474 104 458 1.50e-34 135
MS.gene047750.t1 MTR_6g035185 25.871 402 238 12 110 481 114 485 1.59e-34 135
MS.gene047750.t1 MTR_5g045970 32.517 286 155 8 211 477 225 491 1.70e-34 135
MS.gene047750.t1 MTR_4g118000 29.825 285 164 9 211 477 199 465 2.14e-34 135
MS.gene047750.t1 MTR_7g070910 25.775 516 293 22 5 474 9 480 2.50e-34 135
MS.gene047750.t1 MTR_5g072840 26.240 484 298 16 7 477 10 447 2.56e-34 134
MS.gene047750.t1 MTR_7g013220 25.532 470 279 18 7 452 5 427 2.75e-34 134
MS.gene047750.t1 MTR_2g035040 30.462 325 173 12 181 471 74 379 3.04e-34 133
MS.gene047750.t1 MTR_3g479470 26.499 517 291 20 3 477 9 478 5.82e-34 134
MS.gene047750.t1 MTR_1g107380 25.904 498 313 15 2 477 8 471 5.87e-34 134
MS.gene047750.t1 MTR_1g107365 24.547 497 302 15 7 479 45 492 6.80e-34 134
MS.gene047750.t1 MTR_6g014240 26.223 511 291 20 1 485 1 451 7.72e-34 133
MS.gene047750.t1 MTR_6g014310 29.874 318 180 10 173 477 192 479 1.03e-33 133
MS.gene047750.t1 MTR_8g006230 34.826 201 124 3 116 315 55 249 1.16e-33 129
MS.gene047750.t1 MTR_7g013180 27.254 488 292 17 7 477 5 446 1.20e-33 132
MS.gene047750.t1 MTR_8g083280 32.342 269 150 5 212 477 221 460 1.27e-33 132
MS.gene047750.t1 MTR_6g078320 27.515 487 298 18 6 466 10 467 1.58e-33 132
MS.gene047750.t1 MTR_6g014190 33.333 213 120 3 265 477 95 285 1.66e-33 129
MS.gene047750.t1 MTR_5g072810 24.486 486 307 12 7 477 12 452 1.81e-33 132
MS.gene047750.t1 MTR_8g007585 34.742 213 117 4 265 477 200 390 2.55e-33 130
MS.gene047750.t1 MTR_7g080900 26.316 494 284 17 3 470 8 447 3.17e-33 131
MS.gene047750.t1 MTR_7g067120 34.413 247 123 9 224 459 193 411 3.62e-33 130
MS.gene047750.t1 MTR_0477s0010 34.722 216 119 5 265 480 125 318 4.61e-33 128
MS.gene047750.t1 MTR_5g072820 26.955 486 292 19 7 477 10 447 4.73e-33 130
MS.gene047750.t1 MTR_6g014150 32.743 226 130 4 259 484 279 482 4.90e-33 131
MS.gene047750.t1 MTR_2g059240 27.517 447 248 17 7 423 13 413 5.87e-33 130
MS.gene047750.t1 MTR_6g011340 29.861 288 163 7 200 477 220 478 6.02e-33 131
MS.gene047750.t1 MTR_6g035295 26.036 507 296 20 18 484 23 490 6.28e-33 131
MS.gene047750.t1 MTR_7g067330 34.052 232 121 7 233 459 207 411 8.26e-33 130
MS.gene047750.t1 MTR_4g485620 30.634 284 165 5 195 468 183 444 1.34e-32 130
MS.gene047750.t1 MTR_8g044140 36.328 256 133 10 242 481 210 451 1.47e-32 129
MS.gene047750.t1 MTR_7g102450 27.976 504 286 19 7 477 11 470 1.58e-32 130
MS.gene047750.t1 MTR_4g117980 31.469 286 169 9 207 477 207 480 2.11e-32 129
MS.gene047750.t1 MTR_5g031830 29.925 401 211 17 100 471 104 463 2.30e-32 129
MS.gene047750.t1 MTR_2g008226 28.302 477 269 19 7 452 10 444 2.69e-32 129
MS.gene047750.t1 MTR_6g042310 27.743 483 267 15 7 462 18 445 3.44e-32 129
MS.gene047750.t1 MTR_0536s0010 25.251 499 275 22 17 474 31 472 3.82e-32 129
MS.gene047750.t1 MTR_6g014187 24.951 513 321 15 4 485 7 486 5.47e-32 128
MS.gene047750.t1 MTR_7g102560 31.488 289 156 8 211 477 214 482 1.05e-31 127
MS.gene047750.t1 MTR_8g088560 27.140 479 289 16 7 467 10 446 1.27e-31 127
MS.gene047750.t1 MTR_5g031840 27.521 476 251 24 7 442 5 426 1.55e-31 127
MS.gene047750.t1 MTR_2g035020 30.070 286 169 9 206 474 206 477 1.62e-31 127
MS.gene047750.t1 MTR_5g066410 36.245 229 116 7 236 452 205 415 1.74e-31 126
MS.gene047750.t1 MTR_7g070870 32.847 274 149 8 185 445 196 447 1.76e-31 126
MS.gene047750.t1 MTR_4g123553 27.291 491 232 18 7 447 15 430 2.38e-31 126
MS.gene047750.t1 MTR_8g043470 31.364 220 129 3 265 484 186 383 2.39e-31 125
MS.gene047750.t1 MTR_2086s0010 32.500 200 111 5 287 486 1 176 2.90e-31 119
MS.gene047750.t1 MTR_1996s0010 32.500 200 111 5 287 486 1 176 2.90e-31 119
MS.gene047750.t1 MTR_7g080940 25.202 496 289 17 1 470 5 444 2.99e-31 125
MS.gene047750.t1 MTR_7g071050 35.945 217 112 5 253 459 221 420 3.10e-31 125
MS.gene047750.t1 MTR_5g090690 44.828 145 72 4 242 383 166 305 3.76e-31 124
MS.gene047750.t1 MTR_5g031860 26.061 495 292 18 7 471 12 462 3.81e-31 125
MS.gene047750.t1 MTR_5g040030 27.800 500 297 20 18 484 25 493 4.09e-31 126
MS.gene047750.t1 MTR_7g102520 36.444 225 117 5 264 477 278 487 4.30e-31 126
MS.gene047750.t1 MTR_8g068360 27.255 499 245 20 7 454 12 443 4.71e-31 125
MS.gene047750.t1 MTR_8g007565 25.988 481 285 17 1 452 1 439 5.90e-31 125
MS.gene047750.t1 MTR_5g029800 32.917 240 137 7 255 479 254 484 6.53e-31 125
MS.gene047750.t1 MTR_1g040310 34.252 254 135 8 244 481 249 486 6.67e-31 125
MS.gene047750.t1 MTR_5g016480 25.437 515 293 18 4 477 5 469 6.92e-31 125
MS.gene047750.t1 MTR_7g039550 33.871 248 135 6 240 474 26 257 7.32e-31 120
MS.gene047750.t1 MTR_3g084540 25.889 506 311 17 2 477 1 472 8.15e-31 125
MS.gene047750.t1 MTR_8g068340 36.866 217 115 5 242 454 246 444 1.07e-30 124
MS.gene047750.t1 MTR_5g072860 25.558 493 285 15 7 470 18 457 1.35e-30 124
MS.gene047750.t1 MTR_8g007650 25.988 481 285 17 1 452 1 439 1.39e-30 124
MS.gene047750.t1 MTR_3g084530 26.285 506 308 16 2 477 1 471 1.86e-30 124
MS.gene047750.t1 MTR_3g069690 26.844 488 255 18 3 454 4 425 2.15e-30 123
MS.gene047750.t1 MTR_8g032950 32.895 228 134 5 260 477 261 479 2.26e-30 124
MS.gene047750.t1 MTR_2g008220 25.948 501 241 16 7 452 14 439 2.30e-30 123
MS.gene047750.t1 MTR_8g068330 33.333 261 138 6 202 454 208 440 3.11e-30 123
MS.gene047750.t1 MTR_7g080935 24.900 498 288 16 1 470 5 444 5.17e-30 122
MS.gene047750.t1 MTR_4g077960 26.434 488 269 16 16 473 1 428 6.70e-30 122
MS.gene047750.t1 MTR_5g075440 23.742 497 301 16 7 477 10 454 1.11e-29 121
MS.gene047750.t1 MTR_7g070760 34.123 211 90 4 211 414 32 200 1.39e-29 115
MS.gene047750.t1 MTR_5g039900 26.453 499 292 22 18 479 24 484 2.38e-29 120
MS.gene047750.t1 MTR_5g067170 25.052 479 314 11 14 471 18 472 2.38e-29 120
MS.gene047750.t1 MTR_3g031400 25.157 477 287 14 6 467 17 438 2.38e-29 120
MS.gene047750.t1 MTR_6g014300 25.397 504 306 18 3 480 8 467 1.01e-28 119
MS.gene047750.t1 MTR_2g046620 26.195 481 297 16 7 473 16 452 1.02e-28 119
MS.gene047750.t1 MTR_2g008225 34.562 217 118 4 241 452 243 440 1.72e-28 118
MS.gene047750.t1 MTR_5g004940 31.304 230 113 6 244 448 182 391 3.24e-28 116
MS.gene047750.t1 MTR_3g031450 24.043 470 303 13 6 467 17 440 3.61e-28 117
MS.gene047750.t1 MTR_3g084520 24.706 510 311 17 2 477 1 471 7.65e-28 116
MS.gene047750.t1 MTR_6g036650 26.237 465 287 15 7 452 18 445 9.08e-28 116
MS.gene047750.t1 MTR_7g080950 29.520 271 160 9 206 470 194 439 2.47e-27 114
MS.gene047750.t1 MTR_5g090650 26.087 368 211 11 4 360 2 319 1.24e-26 110
MS.gene047750.t1 MTR_4g059370 35.326 184 104 3 267 447 190 361 2.44e-26 110
MS.gene047750.t1 MTR_3g435310 34.673 199 107 5 253 447 210 389 3.71e-26 110
MS.gene047750.t1 MTR_4g079250 31.111 225 133 5 259 477 248 456 5.26e-25 107
MS.gene047750.t1 MTR_4g079270 30.901 233 143 5 241 472 236 451 1.57e-24 106
MS.gene047750.t1 MTR_8g056740 28.631 241 136 7 252 487 152 361 6.19e-24 103
MS.gene047750.t1 MTR_1g090270 34.010 197 115 4 246 442 245 426 3.70e-23 102
MS.gene047750.t1 MTR_6g014185 29.630 270 137 11 210 477 125 343 4.57e-23 100
MS.gene047750.t1 MTR_5g098960 31.395 258 138 9 197 444 197 425 8.62e-22 98.2
MS.gene047750.t1 MTR_2g014900 27.935 247 154 4 208 454 208 430 9.43e-22 98.2
MS.gene047750.t1 MTR_6g014000 37.302 126 72 2 343 468 27 145 1.86e-21 97.4
MS.gene047750.t1 MTR_5g066390 35.135 148 87 3 330 477 75 213 2.26e-21 92.8
MS.gene047750.t1 MTR_1g107325 32.867 143 89 2 325 467 206 341 8.47e-21 94.4
MS.gene047750.t1 MTR_0536s0030 35.294 153 87 5 336 477 199 350 8.75e-21 94.4
MS.gene047750.t1 MTR_2g083430 31.405 242 146 6 234 473 229 452 9.53e-20 92.0
MS.gene047750.t1 MTR_6g014160 27.778 252 115 9 200 441 202 396 1.82e-19 90.9
MS.gene047750.t1 MTR_7g070995 33.594 128 77 2 355 474 13 140 1.87e-19 85.5
MS.gene047750.t1 MTR_2g083480 31.429 245 140 7 233 473 232 452 4.81e-19 90.1
MS.gene047750.t1 MTR_2g083380 32.727 220 123 5 237 455 255 450 5.46e-19 90.1
MS.gene047750.t1 MTR_2g083420 36.486 148 91 3 332 477 286 432 3.03e-18 87.4
MS.gene047750.t1 MTR_2g083390 35.135 148 93 3 332 477 286 432 1.98e-17 84.7
MS.gene047750.t1 MTR_2g083490 32.727 220 123 5 237 455 238 433 4.43e-17 84.0
MS.gene047750.t1 MTR_1g090280 30.128 156 97 2 287 442 133 276 5.65e-17 82.0
MS.gene047750.t1 MTR_6g052375 28.241 216 124 4 148 360 7 194 3.71e-16 79.7
MS.gene047750.t1 MTR_2g086283 31.677 161 73 4 297 455 186 311 9.94e-13 69.7
MS.gene047750.t1 MTR_6g005660 24.809 262 186 6 5 263 4 257 2.99e-12 67.0
MS.gene047750.t1 MTR_0184s0010 38.542 96 57 1 386 481 4 97 5.69e-12 62.4
MS.gene047750.t1 MTR_0475s0030 43.636 55 31 0 365 419 11 65 2.82e-11 60.5
MS.gene047750.t1 MTR_3g009500 26.136 264 178 7 5 258 3 259 8.71e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047750.t1 AT3G50740 47.166 494 245 9 5 493 5 487 1.68e-156 454
MS.gene047750.t1 AT5G66690 44.835 484 248 8 5 484 5 473 1.80e-149 436
MS.gene047750.t1 AT5G26310 43.685 483 251 8 5 482 5 471 2.86e-146 427
MS.gene047750.t1 AT2G18570 42.977 477 256 7 7 480 5 468 1.11e-127 380
MS.gene047750.t1 AT4G36770 46.753 462 218 13 7 460 4 445 1.88e-127 379
MS.gene047750.t1 AT4G01070 40.586 478 252 8 3 477 4 452 2.01e-109 333
MS.gene047750.t1 AT1G01390 43.590 468 246 9 7 471 8 460 2.72e-109 333
MS.gene047750.t1 AT1G01390 43.590 468 246 9 7 471 25 477 3.49e-109 333
MS.gene047750.t1 AT1G01420 43.237 451 237 8 7 454 11 445 8.30e-108 329
MS.gene047750.t1 AT1G01420 43.237 451 237 8 7 454 8 442 9.11e-108 329
MS.gene047750.t1 AT2G18560 43.299 388 208 4 95 480 1 378 2.09e-105 320
MS.gene047750.t1 AT4G15280 32.673 505 279 12 5 490 2 464 1.27e-68 228
MS.gene047750.t1 AT4G15280 32.673 505 279 12 5 490 34 496 2.14e-68 228
MS.gene047750.t1 AT3G16520 31.092 476 295 9 9 476 7 457 2.06e-67 224
MS.gene047750.t1 AT3G16520 31.991 447 278 8 9 447 7 435 9.43e-67 221
MS.gene047750.t1 AT3G16520 31.991 447 278 8 9 447 7 435 9.52e-67 222
MS.gene047750.t1 AT3G21790 32.568 479 260 14 5 449 2 451 1.32e-64 217
MS.gene047750.t1 AT3G21800 31.549 523 269 20 4 482 2 479 1.40e-64 217
MS.gene047750.t1 AT3G21750 32.008 503 275 14 5 477 2 467 1.38e-63 214
MS.gene047750.t1 AT3G21760 31.141 517 273 16 5 477 2 479 1.46e-62 212
MS.gene047750.t1 AT1G07250 31.911 492 274 14 4 467 3 461 3.13e-62 211
MS.gene047750.t1 AT4G01070 38.218 348 199 6 3 347 4 338 8.89e-61 203
MS.gene047750.t1 AT1G07260 32.258 465 263 12 9 449 8 444 3.22e-59 202
MS.gene047750.t1 AT3G21780 31.944 504 274 18 5 477 2 467 6.11e-59 202
MS.gene047750.t1 AT2G29740 31.911 492 274 17 4 467 5 463 1.30e-58 201
MS.gene047750.t1 AT2G29710 31.568 491 278 16 9 477 7 461 2.72e-58 200
MS.gene047750.t1 AT1G07240 32.604 503 270 18 9 477 7 474 9.68e-58 199
MS.gene047750.t1 AT4G15260 35.185 378 200 9 120 477 1 353 3.70e-57 194
MS.gene047750.t1 AT2G29730 28.921 491 301 12 4 477 2 461 2.35e-56 195
MS.gene047750.t1 AT2G29750 30.390 487 274 17 4 460 5 456 1.11e-55 193
MS.gene047750.t1 AT2G16890 30.818 477 256 14 7 453 9 441 8.12e-51 180
MS.gene047750.t1 AT2G15490 29.283 502 307 13 1 477 1 479 8.25e-51 180
MS.gene047750.t1 AT2G15480 28.715 498 310 10 2 477 5 479 1.21e-50 180
MS.gene047750.t1 AT2G15490 28.685 502 307 12 1 477 1 476 1.60e-50 179
MS.gene047750.t1 AT5G59580 29.449 472 290 11 5 471 7 440 2.08e-50 178
MS.gene047750.t1 AT2G15480 29.677 465 282 10 2 444 5 446 3.73e-50 179
MS.gene047750.t1 AT5G59590 29.684 475 288 13 4 471 7 442 1.10e-49 176
MS.gene047750.t1 AT4G34131 29.752 484 269 14 4 452 7 454 1.38e-48 174
MS.gene047750.t1 AT5G12890 30.357 504 262 21 9 465 12 473 1.22e-47 172
MS.gene047750.t1 AT1G78270 29.746 511 271 21 3 471 9 473 3.14e-47 171
MS.gene047750.t1 AT2G31790 30.000 490 270 17 3 467 4 445 6.23e-47 169
MS.gene047750.t1 AT3G46690 29.668 482 290 15 4 476 6 447 6.51e-47 169
MS.gene047750.t1 AT2G16890 30.549 455 242 14 7 431 9 419 1.28e-46 167
MS.gene047750.t1 AT1G22360 29.842 506 279 21 2 471 5 470 1.36e-45 166
MS.gene047750.t1 AT3G46680 28.870 478 293 16 2 471 4 442 1.40e-45 165
MS.gene047750.t1 AT1G22400 30.709 508 271 25 3 471 9 474 3.67e-45 165
MS.gene047750.t1 AT5G14860 29.860 499 265 20 2 460 3 456 2.20e-44 163
MS.gene047750.t1 AT4G34135 29.004 462 273 13 4 438 8 441 6.49e-44 161
MS.gene047750.t1 AT1G24100 29.979 477 288 14 5 470 9 450 7.86e-44 161
MS.gene047750.t1 AT2G36970 26.411 496 300 14 3 471 6 463 1.07e-43 161
MS.gene047750.t1 AT3G46700 28.855 454 267 15 4 447 6 413 1.27e-43 160
MS.gene047750.t1 AT2G36770 26.731 520 305 18 1 477 1 487 1.91e-43 160
MS.gene047750.t1 AT1G05680 28.660 485 289 11 2 470 1 444 1.97e-43 159
MS.gene047750.t1 AT5G03490 29.880 502 274 20 3 479 15 463 2.25e-43 160
MS.gene047750.t1 AT3G46660 28.782 476 291 14 5 471 12 448 4.52e-43 159
MS.gene047750.t1 AT2G36800 27.027 518 305 17 1 477 1 486 5.57e-43 159
MS.gene047750.t1 AT1G10400 28.601 486 301 13 1 471 1 455 9.34e-43 158
MS.gene047750.t1 AT2G36760 28.571 504 297 20 7 477 14 487 1.31e-42 158
MS.gene047750.t1 AT1G05675 27.893 484 286 13 6 470 5 444 2.31e-42 157
MS.gene047750.t1 AT1G22340 27.530 494 284 17 3 461 9 463 2.60e-42 157
MS.gene047750.t1 AT1G51210 28.846 468 263 15 3 452 16 431 4.10e-42 155
MS.gene047750.t1 AT3G53160 27.984 511 291 17 7 477 8 481 4.34e-42 157
MS.gene047750.t1 AT2G36780 28.016 514 306 16 1 477 1 487 7.73e-42 156
MS.gene047750.t1 AT5G17050 26.501 483 300 14 3 471 8 449 1.25e-41 155
MS.gene047750.t1 AT1G22380 27.634 503 290 15 4 471 10 473 3.87e-41 154
MS.gene047750.t1 AT3G46670 28.898 481 274 16 9 471 11 441 9.26e-41 152
MS.gene047750.t1 AT4G34138 35.793 271 134 7 211 467 223 467 1.38e-40 152
MS.gene047750.t1 AT3G46650 29.019 479 267 18 5 471 8 425 2.56e-40 150
MS.gene047750.t1 AT3G46720 28.033 478 286 14 3 471 5 433 3.47e-40 150
MS.gene047750.t1 AT2G43840 28.657 499 260 17 1 467 1 435 1.59e-39 149
MS.gene047750.t1 AT1G22360 28.656 506 273 21 2 471 5 458 2.10e-39 149
MS.gene047750.t1 AT2G36750 27.006 511 295 19 7 477 10 482 6.21e-39 148
MS.gene047750.t1 AT2G43840 28.457 499 261 17 1 467 1 435 8.57e-39 147
MS.gene047750.t1 AT5G05880 27.521 476 300 12 3 471 4 441 3.42e-38 145
MS.gene047750.t1 AT2G36790 27.579 504 302 15 7 477 13 486 4.61e-38 145
MS.gene047750.t1 AT1G30530 28.059 474 287 15 8 471 14 443 4.86e-38 145
MS.gene047750.t1 AT2G30140 28.330 473 291 12 3 468 9 440 5.14e-38 145
MS.gene047750.t1 AT2G30140 28.270 474 291 12 3 468 9 441 5.66e-38 144
MS.gene047750.t1 AT5G17030 26.899 487 292 16 3 471 8 448 1.57e-37 143
MS.gene047750.t1 AT1G22370 29.709 515 259 22 4 471 10 468 1.77e-37 144
MS.gene047750.t1 AT3G53150 27.799 518 284 21 3 467 18 498 6.70e-37 142
MS.gene047750.t1 AT2G30150 28.484 488 283 17 7 477 13 451 2.42e-36 140
MS.gene047750.t1 AT3G21560 25.755 497 304 16 7 476 12 470 2.84e-36 140
MS.gene047750.t1 AT4G15490 25.948 501 294 15 3 471 4 459 4.87e-36 140
MS.gene047750.t1 AT2G43820 27.364 497 269 16 1 467 1 435 6.29e-36 139
MS.gene047750.t1 AT4G15480 25.996 477 317 11 7 471 19 471 1.03e-35 139
MS.gene047750.t1 AT2G28080 27.907 473 288 17 14 469 25 461 1.56e-35 138
MS.gene047750.t1 AT2G30150 28.067 481 280 17 14 477 4 435 1.89e-35 137
MS.gene047750.t1 AT2G26480 32.550 298 170 6 178 471 168 438 2.20e-35 137
MS.gene047750.t1 AT1G73880 26.835 436 254 16 5 415 12 407 4.68e-35 137
MS.gene047750.t1 AT5G17040 27.273 484 279 17 6 471 4 432 5.25e-35 136
MS.gene047750.t1 AT3G11340 32.482 274 155 6 197 467 187 433 1.00e-34 135
MS.gene047750.t1 AT5G17040 29.091 330 192 10 150 471 35 330 1.18e-34 133
MS.gene047750.t1 AT1G22370 34.672 274 137 8 211 471 54 298 1.09e-33 129
MS.gene047750.t1 AT3G55700 25.949 474 306 13 9 474 10 446 2.80e-33 132
MS.gene047750.t1 AT5G65550 26.939 490 272 15 5 459 7 445 2.92e-33 132
MS.gene047750.t1 AT4G15550 25.696 467 293 13 7 449 13 449 4.97e-33 131
MS.gene047750.t1 AT2G31750 26.122 490 289 18 5 470 6 446 5.32e-33 130
MS.gene047750.t1 AT5G05870 33.333 234 133 4 241 471 234 447 5.47e-33 131
MS.gene047750.t1 AT2G31750 26.139 505 296 19 5 481 6 461 5.52e-33 131
MS.gene047750.t1 AT5G38010 25.767 489 303 14 4 476 7 451 5.98e-33 130
MS.gene047750.t1 AT5G05890 26.849 365 237 6 110 471 108 445 2.63e-32 129
MS.gene047750.t1 AT5G38040 30.897 301 168 9 178 471 175 442 1.53e-31 126
MS.gene047750.t1 AT2G23260 25.519 482 295 15 4 467 7 442 2.33e-31 126
MS.gene047750.t1 AT5G49690 25.413 484 263 14 7 454 10 431 8.08e-31 124
MS.gene047750.t1 AT1G05560 25.000 480 317 14 7 477 5 450 9.16e-31 124
MS.gene047750.t1 AT1G05560 25.000 480 317 14 7 477 55 500 1.71e-30 124
MS.gene047750.t1 AT5G05900 26.667 480 298 12 3 471 4 440 2.18e-30 123
MS.gene047750.t1 AT4G15500 23.030 495 315 12 1 471 3 455 2.52e-30 123
MS.gene047750.t1 AT1G06000 25.349 501 280 20 3 480 6 435 5.98e-30 122
MS.gene047750.t1 AT5G05860 34.583 240 133 5 239 475 226 444 8.42e-30 121
MS.gene047750.t1 AT3G55710 32.222 270 151 7 211 474 207 450 2.93e-29 120
MS.gene047750.t1 AT4G14090 25.826 484 290 16 4 467 10 444 5.67e-29 119
MS.gene047750.t1 AT1G05530 26.735 490 294 18 7 473 5 452 1.27e-28 118
MS.gene047750.t1 AT2G23250 30.824 279 152 8 209 477 187 434 5.64e-28 116
MS.gene047750.t1 AT4G27570 29.528 254 155 3 201 454 192 421 1.35e-26 112
MS.gene047750.t1 AT4G27560 29.644 253 154 3 202 454 193 421 2.66e-26 111
MS.gene047750.t1 AT2G22590 25.000 484 279 13 5 454 13 446 5.38e-26 110
MS.gene047750.t1 AT1G64910 30.000 250 151 4 206 455 191 416 5.99e-26 110
MS.gene047750.t1 AT3G02100 31.716 268 127 9 195 449 211 435 2.67e-25 108
MS.gene047750.t1 AT5G53990 29.231 260 160 4 197 456 182 417 2.35e-24 105
MS.gene047750.t1 AT5G54010 28.938 273 168 5 183 454 174 421 2.88e-24 105
MS.gene047750.t1 AT1G64920 23.640 478 295 13 2 461 1 426 2.06e-22 100
MS.gene047750.t1 AT3G29630 25.304 494 308 15 2 483 1 445 3.79e-22 99.4
MS.gene047750.t1 AT5G37950 27.740 292 174 8 106 390 76 337 6.53e-22 97.4
MS.gene047750.t1 AT2G22930 25.869 259 168 3 197 455 182 416 1.95e-21 97.1
MS.gene047750.t1 AT1G50580 27.203 261 168 3 196 456 180 418 2.01e-21 97.1
MS.gene047750.t1 AT5G37950 27.907 301 168 10 106 390 76 343 3.90e-21 95.1
MS.gene047750.t1 AT4G09500 26.154 260 168 3 197 456 182 417 7.67e-21 95.5
MS.gene047750.t1 AT3G29630 29.437 231 146 3 253 483 206 419 1.23e-20 94.7
MS.gene047750.t1 AT4G09500 30.220 182 111 2 274 455 226 391 3.95e-19 90.1
MS.gene047750.t1 AT3G22250 29.048 210 112 6 259 458 268 450 1.21e-18 89.0
MS.gene047750.t1 AT5G54060 28.372 215 136 4 241 454 243 440 7.98e-18 86.3
MS.gene047750.t1 AT4G34135 25.000 332 214 10 4 312 8 327 6.14e-13 70.5

Find 145 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACCGCTTTCGATTCT+TGG 0.115382 5.1:+11342505 MS.gene047750:CDS
ATTAACCGTTGATGGGATTT+TGG 0.180078 5.1:+11342621 MS.gene047750:CDS
AGATGGTTACGTCGAAATTT+TGG 0.193825 5.1:-11342099 None:intergenic
ACTAAGGCGGTTATTGAAAA+TGG 0.203582 5.1:+11342676 MS.gene047750:CDS
CTAATTCAATGGTGGGAATT+AGG 0.215918 5.1:-11342057 None:intergenic
ACAATGATGTCGAGGCTATT+AGG 0.255558 5.1:-11342190 None:intergenic
TGAGTCAGCAGCGATTTATT+TGG 0.260828 5.1:+11342905 MS.gene047750:CDS
AAGATTTGTGATCGAATAAA+AGG 0.277855 5.1:-11342301 None:intergenic
AATCCCAAGGATGGATTGTT+TGG 0.311645 5.1:-11342247 None:intergenic
CTAATTCCCACCATTGAATT+AGG 0.314775 5.1:+11342058 MS.gene047750:CDS
TGAAACATTTGTTGCACCTT+GGG 0.317017 5.1:+11342558 MS.gene047750:CDS
AGTTAAAGTTAATGAGTATA+AGG 0.338726 5.1:+11343344 MS.gene047750:CDS
GTTCTTATCGTGGACCTCTT+TGG 0.343662 5.1:+11342346 MS.gene047750:CDS
TGCTTAAGCACCCCGAGCTT+TGG 0.361718 5.1:-11343466 None:intergenic
TCGGTCATATATTTGTCATT+TGG 0.365839 5.1:+11342826 MS.gene047750:CDS
GAGTCAGCAGCGATTTATTT+GGG 0.367043 5.1:+11342906 MS.gene047750:CDS
CTAAGGCGGTTATTGAAAAT+GGG 0.367692 5.1:+11342677 MS.gene047750:CDS
CAATGATGTCGAGGCTATTA+GGG 0.371535 5.1:-11342189 None:intergenic
GGTGAACACGTGGCAAGATC+TGG 0.384639 5.1:+11342642 MS.gene047750:CDS
AGGGAAATATTAACCGTTGA+TGG 0.384981 5.1:+11342613 MS.gene047750:CDS
GAGGGAGTTGGCTTACGGTT+TGG 0.386069 5.1:+11342879 MS.gene047750:CDS
GAGAAAGCTTCGTCTGTGTT+TGG 0.391515 5.1:+11343375 MS.gene047750:CDS
TTCGATTCTTGGTTGTGAAC+CGG 0.393108 5.1:+11342516 MS.gene047750:CDS
AACTGTGGTGGATTACTTGC+CGG 0.398081 5.1:+11342996 MS.gene047750:CDS
TTGTGAACCGGTTCGGTTTG+AGG 0.405899 5.1:+11342528 MS.gene047750:CDS
TGACCGACTCAGCCGGTTGC+CGG 0.409864 5.1:-11342810 None:intergenic
TCACTCTCACCACCCTTCTT+CGG 0.418950 5.1:-11342763 None:intergenic
GAGCTTTGGCTTCAGATCCT+TGG 0.420922 5.1:-11343452 None:intergenic
ACCACCCTTCTTCGGTTCAT+CGG 0.423363 5.1:-11342755 None:intergenic
GTCACAAAACCACCCGTTGA+TGG 0.428969 5.1:-11343096 None:intergenic
TTCTTGGTTGTGAACCGGTT+CGG 0.442022 5.1:+11342521 MS.gene047750:CDS
GAGTTGGCTTGACCGGCAAC+CGG 0.442794 5.1:+11342798 MS.gene047750:CDS
CTTTGGCTTCAGATCCTTGG+TGG 0.442832 5.1:-11343449 None:intergenic
AACAGATGGAGGATTCTTCA+TGG 0.448895 5.1:-11342326 None:intergenic
CTCAGCTTGTGGGGCCCACA+TGG 0.449094 5.1:-11343061 None:intergenic
GTTAATGAGTATAAGGTAAG+TGG 0.459473 5.1:+11343351 MS.gene047750:CDS
CAAATGAGGGAGTTGGCTTA+CGG 0.461895 5.1:+11342874 MS.gene047750:CDS
TTGAAACATTTGTTGCACCT+TGG 0.462520 5.1:+11342557 MS.gene047750:CDS
AGGATCTGAAGCCAAAGCTC+GGG 0.464549 5.1:+11343455 MS.gene047750:CDS
ATCCCAAGGATGGATTGTTT+GGG 0.467520 5.1:-11342246 None:intergenic
TCTGGAGCCAACAGCTACTA+AGG 0.469308 5.1:+11342660 MS.gene047750:CDS
GACCCAAACAATCCATCCTT+GGG 0.471552 5.1:+11342244 MS.gene047750:CDS
AAGACGTTTGCCTAATTCAA+TGG 0.473005 5.1:-11342068 None:intergenic
GGAGCTTGGTGTGGCGGTGA+AGG 0.473757 5.1:+11343224 MS.gene047750:CDS
GGCAACGACAACGGTGGCGG+AGG 0.476716 5.1:+11343245 MS.gene047750:CDS
ATTGTTTGGGTCAAGTTTGT+CGG 0.477630 5.1:-11342233 None:intergenic
TCTTCTAGCCAGTCCTGGCA+TGG 0.479572 5.1:+11342030 MS.gene047750:CDS
TGACCCAAACAATCCATCCT+TGG 0.481784 5.1:+11342243 MS.gene047750:CDS
AAGAACCGATGAACCGAAGA+AGG 0.487455 5.1:+11342750 MS.gene047750:CDS
TTCAACGTTGCGGGTGCAGA+TGG 0.491511 5.1:+11342970 MS.gene047750:CDS
GTGTTGGAGAGTATTCTTAA+CGG 0.492493 5.1:+11343138 MS.gene047750:CDS
ATATTAAAACATCCATCAAC+GGG 0.492704 5.1:+11343084 MS.gene047750:CDS
AAAGGACCGGTTTATCCGAT+TGG 0.495178 5.1:+11342718 MS.gene047750:CDS
AGCGGTCCAATCGGATAAAC+CGG 0.497350 5.1:-11342724 None:intergenic
GCAGTTCTTCTAGCCAGTCC+TGG 0.507678 5.1:+11342025 MS.gene047750:CDS
GTTCTTACTAGCGGTCCAAT+CGG 0.509543 5.1:-11342733 None:intergenic
ATATATTTGTCATTTGGAAG+TGG 0.509609 5.1:+11342832 MS.gene047750:CDS
TATTTGTCATTTGGAAGTGG+TGG 0.510421 5.1:+11342835 MS.gene047750:CDS
GGAATTAGGTGTCCCATGCC+AGG 0.512529 5.1:-11342043 None:intergenic
AGGGCTTTGTGTTCCCATGT+GGG 0.512578 5.1:+11343047 MS.gene047750:CDS
TAGGTGTCCCATGCCAGGAC+TGG 0.514601 5.1:-11342038 None:intergenic
AAGGTGCAACAAATGTTTCA+AGG 0.516516 5.1:-11342555 None:intergenic
AGGAAAGTTTGTGAAAGGAC+CGG 0.516563 5.1:+11342705 MS.gene047750:CDS
ACAATTTGTAATCCCAAGGA+TGG 0.518037 5.1:-11342256 None:intergenic
CATGTGCAACTCACGTGCCA+TGG 0.524195 5.1:-11342383 None:intergenic
GGGAAATATTAACCGTTGAT+GGG 0.526221 5.1:+11342614 MS.gene047750:CDS
AGGGTATCCTCAAACCGAAC+CGG 0.526804 5.1:-11342535 None:intergenic
TGAATAGGACAAAAGAGGTA+GGG 0.527801 5.1:+11343028 MS.gene047750:CDS
AAGGATCTGAAGCCAAAGCT+CGG 0.532679 5.1:+11343454 MS.gene047750:CDS
TTGAATAGGACAAAAGAGGT+AGG 0.532740 5.1:+11343027 MS.gene047750:CDS
TAGGGCTTTGTGTTCCCATG+TGG 0.539065 5.1:+11343046 MS.gene047750:CDS
GGAAGTGATTAGAAGAGTGA+TGG 0.539334 5.1:+11343296 MS.gene047750:CDS
TGACCGGCAACCGGCTGAGT+CGG 0.540269 5.1:+11342807 MS.gene047750:CDS
ATTTGTCATTTGGAAGTGGT+GGG 0.540559 5.1:+11342836 MS.gene047750:CDS
ACGGTGTTCCGATGGTTGCA+TGG 0.543830 5.1:+11343157 MS.gene047750:CDS
CCTCATTTGACCTTCCGACA+TGG 0.544554 5.1:-11342860 None:intergenic
TAGAACAATTTGTAATCCCA+AGG 0.551662 5.1:-11342260 None:intergenic
TGCGGATGCATTATCCTCTG+TGG 0.553495 5.1:-11342941 None:intergenic
TATTCTTAACGGTGTTCCGA+TGG 0.555061 5.1:+11343149 MS.gene047750:CDS
CTTCATCTGTGATGAAAGGA+AGG 0.555836 5.1:-11342459 None:intergenic
GCAACGACAACGGTGGCGGA+GGG 0.556375 5.1:+11343246 MS.gene047750:CDS
AACAGCAGTGAACCAAGCAT+TGG 0.558371 5.1:-11342428 None:intergenic
GCGGTTCATGATTCTTAGCA+TGG 0.558955 5.1:-11342492 None:intergenic
GAAGGCAACGACAACGGTGG+CGG 0.559539 5.1:+11343242 MS.gene047750:CDS
CCATGTCGGAAGGTCAAATG+AGG 0.560519 5.1:+11342860 MS.gene047750:CDS
ACGACAACGGTGGCGGAGGG+TGG 0.561139 5.1:+11343249 MS.gene047750:CDS
CGTTTGCCTAATTCAATGGT+GGG 0.562353 5.1:-11342064 None:intergenic
ATTACAAATTGTTCTAACCA+TGG 0.565528 5.1:+11342267 MS.gene047750:CDS
ATCTTCTGCTCTGCATAAAG+CGG 0.565650 5.1:-11343180 None:intergenic
GATTTATTTGGGTGGTGCGG+CGG 0.565726 5.1:+11342917 MS.gene047750:CDS
CTTCTAGCCAGTCCTGGCAT+GGG 0.570142 5.1:+11342031 MS.gene047750:CDS
GGAAGGTCAAATGAGGGAGT+TGG 0.572490 5.1:+11342867 MS.gene047750:CDS
AAATATATGACCGACTCAGC+CGG 0.572985 5.1:-11342817 None:intergenic
AAAGCTTCATCTGTGATGAA+AGG 0.573302 5.1:-11342463 None:intergenic
AGTTTGTCGGAGACATCGAC+AGG 0.575889 5.1:-11342220 None:intergenic
TCAGCTTGTGGGGCCCACAT+GGG 0.580375 5.1:-11343060 None:intergenic
GCGGATGCATTATCCTCTGT+GGG 0.580659 5.1:-11342940 None:intergenic
ATGTGCAACTCACGTGCCAT+GGG 0.583729 5.1:-11342382 None:intergenic
GGCGGTTGTGACGACGAAGA+TGG 0.586383 5.1:-11342116 None:intergenic
ACGTTTGCCTAATTCAATGG+TGG 0.587817 5.1:-11342065 None:intergenic
GATATTAAAACATCCATCAA+CGG 0.588547 5.1:+11343083 MS.gene047750:CDS
TCCTCCATCTGTTCTTATCG+TGG 0.589140 5.1:+11342336 MS.gene047750:CDS
TAAGGCGGTTATTGAAAATG+GGG 0.589730 5.1:+11342678 MS.gene047750:CDS
ATAACCGCCTTAGTAGCTGT+TGG 0.593391 5.1:-11342667 None:intergenic
AGGTGCAACAAATGTTTCAA+GGG 0.594651 5.1:-11342554 None:intergenic
GGTTCATCGGTTCTTACTAG+CGG 0.598027 5.1:-11342742 None:intergenic
AGAGTGATGGTTGATGAAGA+AGG 0.601665 5.1:+11343309 MS.gene047750:CDS
AGGTCCACGATAAGAACAGA+TGG 0.601849 5.1:-11342340 None:intergenic
GGTGGTGCGGCGGCCCACAG+AGG 0.603216 5.1:+11342927 MS.gene047750:CDS
AAAGTTACGTTGAAGTCACA+AGG 0.605910 5.1:+11342593 MS.gene047750:CDS
TAAAGCGGCCATGCAACCAT+CGG 0.607242 5.1:-11343165 None:intergenic
ATCAGAGGAGCTTGGTGTGG+CGG 0.609932 5.1:+11343218 MS.gene047750:CDS
AGCGATTTATTTGGGTGGTG+CGG 0.610105 5.1:+11342914 MS.gene047750:CDS
GAAACATTTGTTGCACCTTG+GGG 0.615035 5.1:+11342559 MS.gene047750:CDS
TCAGCAGCGATTTATTTGGG+TGG 0.615645 5.1:+11342909 MS.gene047750:CDS
CTGTGGTTGGAATTCTGTGT+TGG 0.615758 5.1:+11343122 MS.gene047750:CDS
AGTGGTGGGACCATGTCGGA+AGG 0.619154 5.1:+11342850 MS.gene047750:CDS
GGATCTGAAGCCAAAGCTCG+GGG 0.626278 5.1:+11343456 MS.gene047750:CDS
GGCGGTGAAGGCAACGACAA+CGG 0.626813 5.1:+11343236 MS.gene047750:CDS
TGTGTCTGAATCTGAGGTGG+CGG 0.636604 5.1:-11342134 None:intergenic
GTTATCAGAGGAGCTTGGTG+TGG 0.639672 5.1:+11343215 MS.gene047750:CDS
GAATGCTACTATGTTATCAG+AGG 0.641274 5.1:+11343203 MS.gene047750:CDS
ACTATGTTATCAGAGGAGCT+TGG 0.641970 5.1:+11343210 MS.gene047750:CDS
TTAAAACATCCATCAACGGG+TGG 0.642894 5.1:+11343087 MS.gene047750:CDS
ACCGATGAACCGAAGAAGGG+TGG 0.643390 5.1:+11342754 MS.gene047750:CDS
GTGGTGGATTACTTGCCGGA+GGG 0.643856 5.1:+11343000 MS.gene047750:CDS
TGATGTGTCTGAATCTGAGG+TGG 0.643996 5.1:-11342137 None:intergenic
TGTGGTGGATTACTTGCCGG+AGG 0.647091 5.1:+11342999 MS.gene047750:CDS
TGGAAGTGGTGGGACCATGT+CGG 0.656190 5.1:+11342846 MS.gene047750:CDS
TCCACGATAAGAACAGATGG+AGG 0.660881 5.1:-11342337 None:intergenic
AGAACCGATGAACCGAAGAA+GGG 0.660938 5.1:+11342751 MS.gene047750:CDS
GAAAAGCTGCAGTACCAAAG+AGG 0.662878 5.1:-11342360 None:intergenic
GTTCACCAAAATCCCATCAA+CGG 0.668646 5.1:-11342626 None:intergenic
TGCAGATGGAACAACTGTGG+TGG 0.673467 5.1:+11342984 MS.gene047750:CDS
GAGGTGTTACAATGATGTCG+AGG 0.687521 5.1:-11342198 None:intergenic
CATGTCGGAAGGTCAAATGA+GGG 0.688297 5.1:+11342861 MS.gene047750:CDS
TGTGAACTTTATCTCCACCA+AGG 0.688348 5.1:+11343435 MS.gene047750:CDS
TTGTCGGAGACATCGACAGG+AGG 0.693714 5.1:-11342217 None:intergenic
AAGTTACGTTGAAGTCACAA+GGG 0.708644 5.1:+11342594 MS.gene047750:CDS
GGTGAAGGCAACGACAACGG+TGG 0.716471 5.1:+11343239 MS.gene047750:CDS
AAAAGGAAGAGATTCAACCA+TGG 0.722073 5.1:-11342284 None:intergenic
TGTTTGTAGAGAAAATATAG+CGG 0.725903 5.1:+11343275 MS.gene047750:CDS
TCACAACCAAGAATCGAAAG+CGG 0.733034 5.1:-11342511 None:intergenic
GGAGCCAACAGCTACTAAGG+CGG 0.734831 5.1:+11342663 MS.gene047750:CDS
GGGTGCAGATGGAACAACTG+TGG 0.777902 5.1:+11342981 MS.gene047750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTAAAGTTAATGAGTATA+AGG + chr5.1:11343344-11343363 MS.gene047750:CDS 20.0%
!!! GTGAAAATTTAATTTTGAGT+TGG + chr5.1:11342782-11342801 MS.gene047750:CDS 20.0%
! AAGATTTGTGATCGAATAAA+AGG - chr5.1:11342304-11342323 None:intergenic 25.0%
! ATATTAAAACATCCATCAAC+GGG + chr5.1:11343084-11343103 MS.gene047750:CDS 25.0%
! ATTACAAATTGTTCTAACCA+TGG + chr5.1:11342267-11342286 MS.gene047750:CDS 25.0%
! GATATTAAAACATCCATCAA+CGG + chr5.1:11343083-11343102 MS.gene047750:CDS 25.0%
! TGTTTGTAGAGAAAATATAG+CGG + chr5.1:11343275-11343294 MS.gene047750:CDS 25.0%
!! ATATATTTGTCATTTGGAAG+TGG + chr5.1:11342832-11342851 MS.gene047750:CDS 25.0%
!! ATTTTTGAATAGGACAAAAG+AGG + chr5.1:11343023-11343042 MS.gene047750:CDS 25.0%
!! TCAACGTAACTTTTATGAAT+AGG - chr5.1:11342586-11342605 None:intergenic 25.0%
!! TCATGAATCTTTTTGTAAGA+TGG + chr5.1:11343404-11343423 MS.gene047750:CDS 25.0%
GTTAATGAGTATAAGGTAAG+TGG + chr5.1:11343351-11343370 MS.gene047750:CDS 30.0%
TAGAACAATTTGTAATCCCA+AGG - chr5.1:11342263-11342282 None:intergenic 30.0%
TCGGTCATATATTTGTCATT+TGG + chr5.1:11342826-11342845 MS.gene047750:CDS 30.0%
! GTTATTGAAAATGGGGTTTT+AGG + chr5.1:11342685-11342704 MS.gene047750:CDS 30.0%
! TTTTAATATCTCAGCTTGTG+GGG - chr5.1:11343073-11343092 None:intergenic 30.0%
!! GTTTTAATATCTCAGCTTGT+GGG - chr5.1:11343074-11343093 None:intergenic 30.0%
!!! AAGAACTGCATGAGTTTTTT+GGG - chr5.1:11342014-11342033 None:intergenic 30.0%
!!! GTTTTAGGAAAGTTTGTGAA+AGG + chr5.1:11342700-11342719 MS.gene047750:CDS 30.0%
!!! TGTTTTAATATCTCAGCTTG+TGG - chr5.1:11343075-11343094 None:intergenic 30.0%
AAAAGGAAGAGATTCAACCA+TGG - chr5.1:11342287-11342306 None:intergenic 35.0%
AAAGCTTCATCTGTGATGAA+AGG - chr5.1:11342466-11342485 None:intergenic 35.0%
AAAGTTACGTTGAAGTCACA+AGG + chr5.1:11342593-11342612 MS.gene047750:CDS 35.0%
AAGACGTTTGCCTAATTCAA+TGG - chr5.1:11342071-11342090 None:intergenic 35.0%
AAGGTGCAACAAATGTTTCA+AGG - chr5.1:11342558-11342577 None:intergenic 35.0%
AAGTTACGTTGAAGTCACAA+GGG + chr5.1:11342594-11342613 MS.gene047750:CDS 35.0%
ACAATTTGTAATCCCAAGGA+TGG - chr5.1:11342259-11342278 None:intergenic 35.0%
ACTAAGGCGGTTATTGAAAA+TGG + chr5.1:11342676-11342695 MS.gene047750:CDS 35.0%
AGGGAAATATTAACCGTTGA+TGG + chr5.1:11342613-11342632 MS.gene047750:CDS 35.0%
AGGTGCAACAAATGTTTCAA+GGG - chr5.1:11342557-11342576 None:intergenic 35.0%
ATTGTTTGGGTCAAGTTTGT+CGG - chr5.1:11342236-11342255 None:intergenic 35.0%
CTAAGGCGGTTATTGAAAAT+GGG + chr5.1:11342677-11342696 MS.gene047750:CDS 35.0%
CTAATTCCCACCATTGAATT+AGG + chr5.1:11342058-11342077 MS.gene047750:CDS 35.0%
GAATGCTACTATGTTATCAG+AGG + chr5.1:11343203-11343222 MS.gene047750:CDS 35.0%
GGGAAATATTAACCGTTGAT+GGG + chr5.1:11342614-11342633 MS.gene047750:CDS 35.0%
TAAGGCGGTTATTGAAAATG+GGG + chr5.1:11342678-11342697 MS.gene047750:CDS 35.0%
TGAATAGGACAAAAGAGGTA+GGG + chr5.1:11343028-11343047 MS.gene047750:CDS 35.0%
TTGAATAGGACAAAAGAGGT+AGG + chr5.1:11343027-11343046 MS.gene047750:CDS 35.0%
! AGATGGTTACGTCGAAATTT+TGG - chr5.1:11342102-11342121 None:intergenic 35.0%
! ATTTGTCATTTGGAAGTGGT+GGG + chr5.1:11342836-11342855 MS.gene047750:CDS 35.0%
! CTAATTCAATGGTGGGAATT+AGG - chr5.1:11342060-11342079 None:intergenic 35.0%
! TATTTGTCATTTGGAAGTGG+TGG + chr5.1:11342835-11342854 MS.gene047750:CDS 35.0%
! TGAAACATTTGTTGCACCTT+GGG + chr5.1:11342558-11342577 MS.gene047750:CDS 35.0%
! TTGAAACATTTGTTGCACCT+TGG + chr5.1:11342557-11342576 MS.gene047750:CDS 35.0%
! TTTTCTTTGCAACCAATGCT+TGG + chr5.1:11342416-11342435 MS.gene047750:CDS 35.0%
! TTTTGATGTGTCTGAATCTG+AGG - chr5.1:11342143-11342162 None:intergenic 35.0%
!! ATTAACCGTTGATGGGATTT+TGG + chr5.1:11342621-11342640 MS.gene047750:CDS 35.0%
!! GTGTTGGAGAGTATTCTTAA+CGG + chr5.1:11343138-11343157 MS.gene047750:CDS 35.0%
!!! GAAGAACTGCATGAGTTTTT+TGG - chr5.1:11342015-11342034 None:intergenic 35.0%
!!! TAATTTTGAGTTGGCTTGAC+CGG + chr5.1:11342791-11342810 MS.gene047750:CDS 35.0%
AACAGATGGAGGATTCTTCA+TGG - chr5.1:11342329-11342348 None:intergenic 40.0%
ACAATGATGTCGAGGCTATT+AGG - chr5.1:11342193-11342212 None:intergenic 40.0%
ACGTTTGCCTAATTCAATGG+TGG - chr5.1:11342068-11342087 None:intergenic 40.0%
ACTATGTTATCAGAGGAGCT+TGG + chr5.1:11343210-11343229 MS.gene047750:CDS 40.0%
AGGAAAGTTTGTGAAAGGAC+CGG + chr5.1:11342705-11342724 MS.gene047750:CDS 40.0%
ATCTTCTGCTCTGCATAAAG+CGG - chr5.1:11343183-11343202 None:intergenic 40.0%
CAATGATGTCGAGGCTATTA+GGG - chr5.1:11342192-11342211 None:intergenic 40.0%
CGTTTGCCTAATTCAATGGT+GGG - chr5.1:11342067-11342086 None:intergenic 40.0%
CTTCATCTGTGATGAAAGGA+AGG - chr5.1:11342462-11342481 None:intergenic 40.0%
GAGTCAGCAGCGATTTATTT+GGG + chr5.1:11342906-11342925 MS.gene047750:CDS 40.0%
GGAAGTGATTAGAAGAGTGA+TGG + chr5.1:11343296-11343315 MS.gene047750:CDS 40.0%
GTCCTATTCAAAAATCCCTC+CGG - chr5.1:11343018-11343037 None:intergenic 40.0%
GTTCACCAAAATCCCATCAA+CGG - chr5.1:11342629-11342648 None:intergenic 40.0%
TATTCTTAACGGTGTTCCGA+TGG + chr5.1:11343149-11343168 MS.gene047750:CDS 40.0%
TCACAACCAAGAATCGAAAG+CGG - chr5.1:11342514-11342533 None:intergenic 40.0%
TGAGTCAGCAGCGATTTATT+TGG + chr5.1:11342905-11342924 MS.gene047750:CDS 40.0%
TGTGAACTTTATCTCCACCA+AGG + chr5.1:11343435-11343454 MS.gene047750:CDS 40.0%
TTAAAACATCCATCAACGGG+TGG + chr5.1:11343087-11343106 MS.gene047750:CDS 40.0%
TTCGATTCTTGGTTGTGAAC+CGG + chr5.1:11342516-11342535 MS.gene047750:CDS 40.0%
! AAATATATGACCGACTCAGC+CGG - chr5.1:11342820-11342839 None:intergenic 40.0%
! CTTTTATGAATAGGTCCCCA+AGG - chr5.1:11342577-11342596 None:intergenic 40.0%
! GAAACATTTGTTGCACCTTG+GGG + chr5.1:11342559-11342578 MS.gene047750:CDS 40.0%
! TGGTTACGTCGAAATTTTGG+TGG - chr5.1:11342099-11342118 None:intergenic 40.0%
!! AATCCCAAGGATGGATTGTT+TGG - chr5.1:11342250-11342269 None:intergenic 40.0%
!! AGAGTGATGGTTGATGAAGA+AGG + chr5.1:11343309-11343328 MS.gene047750:CDS 40.0%
!! ATCCCAAGGATGGATTGTTT+GGG - chr5.1:11342249-11342268 None:intergenic 40.0%
!! GGTTACGTCGAAATTTTGGT+GGG - chr5.1:11342098-11342117 None:intergenic 40.0%
AACAGCAGTGAACCAAGCAT+TGG - chr5.1:11342431-11342450 None:intergenic 45.0%
AAGAACCGATGAACCGAAGA+AGG + chr5.1:11342750-11342769 MS.gene047750:CDS 45.0%
AGAACCGATGAACCGAAGAA+GGG + chr5.1:11342751-11342770 MS.gene047750:CDS 45.0%
AGCGATTTATTTGGGTGGTG+CGG + chr5.1:11342914-11342933 MS.gene047750:CDS 45.0%
AGGTCCACGATAAGAACAGA+TGG - chr5.1:11342343-11342362 None:intergenic 45.0%
ATAACCGCCTTAGTAGCTGT+TGG - chr5.1:11342670-11342689 None:intergenic 45.0%
CATGAACCGCTTTCGATTCT+TGG + chr5.1:11342505-11342524 MS.gene047750:CDS 45.0%
CATGTCGGAAGGTCAAATGA+GGG + chr5.1:11342861-11342880 MS.gene047750:CDS 45.0%
CGCAACGTTGAAAAACGTTG+CGG - chr5.1:11342962-11342981 None:intergenic 45.0%
CTGTGGTTGGAATTCTGTGT+TGG + chr5.1:11343122-11343141 MS.gene047750:CDS 45.0%
GAAAAGCTGCAGTACCAAAG+AGG - chr5.1:11342363-11342382 None:intergenic 45.0%
GACCCAAACAATCCATCCTT+GGG + chr5.1:11342244-11342263 MS.gene047750:CDS 45.0%
GAGAAAGCTTCGTCTGTGTT+TGG + chr5.1:11343375-11343394 MS.gene047750:CDS 45.0%
GCGGTTCATGATTCTTAGCA+TGG - chr5.1:11342495-11342514 None:intergenic 45.0%
GTTCTTACTAGCGGTCCAAT+CGG - chr5.1:11342736-11342755 None:intergenic 45.0%
GTTCTTATCGTGGACCTCTT+TGG + chr5.1:11342346-11342365 MS.gene047750:CDS 45.0%
TCAGCAGCGATTTATTTGGG+TGG + chr5.1:11342909-11342928 MS.gene047750:CDS 45.0%
TCCACGATAAGAACAGATGG+AGG - chr5.1:11342340-11342359 None:intergenic 45.0%
TCCTCCATCTGTTCTTATCG+TGG + chr5.1:11342336-11342355 MS.gene047750:CDS 45.0%
TGACCCAAACAATCCATCCT+TGG + chr5.1:11342243-11342262 MS.gene047750:CDS 45.0%
TGATGTGTCTGAATCTGAGG+TGG - chr5.1:11342140-11342159 None:intergenic 45.0%
TTCTTGGTTGTGAACCGGTT+CGG + chr5.1:11342521-11342540 MS.gene047750:CDS 45.0%
! AAAGGACCGGTTTATCCGAT+TGG + chr5.1:11342718-11342737 MS.gene047750:CDS 45.0%
! AAGGATCTGAAGCCAAAGCT+CGG + chr5.1:11343454-11343473 MS.gene047750:CDS 45.0%
! CAAATGAGGGAGTTGGCTTA+CGG + chr5.1:11342874-11342893 MS.gene047750:CDS 45.0%
! GAGGTGTTACAATGATGTCG+AGG - chr5.1:11342201-11342220 None:intergenic 45.0%
! GTTTTGTGACACACTGTGGT+TGG + chr5.1:11343109-11343128 MS.gene047750:CDS 45.0%
! TGCCGGAGGGATTTTTGAAT+AGG + chr5.1:11343013-11343032 MS.gene047750:CDS 45.0%
!! AACTGTGGTGGATTACTTGC+CGG + chr5.1:11342996-11343015 MS.gene047750:CDS 45.0%
!! ATGGGATTTTGGTGAACACG+TGG + chr5.1:11342632-11342651 MS.gene047750:CDS 45.0%
!! CGCAACGTTTTTCAACGTTG+CGG + chr5.1:11342960-11342979 MS.gene047750:CDS 45.0%
!! GCAACGTTTTTCAACGTTGC+GGG + chr5.1:11342961-11342980 MS.gene047750:CDS 45.0%
!! GGTTCATCGGTTCTTACTAG+CGG - chr5.1:11342745-11342764 None:intergenic 45.0%
!! TACGTCGAAATTTTGGTGGG+TGG - chr5.1:11342095-11342114 None:intergenic 45.0%
ACCACCCTTCTTCGGTTCAT+CGG - chr5.1:11342758-11342777 None:intergenic 50.0%
AGCGGTCCAATCGGATAAAC+CGG - chr5.1:11342727-11342746 None:intergenic 50.0%
AGTTTGTCGGAGACATCGAC+AGG - chr5.1:11342223-11342242 None:intergenic 50.0%
ATGTGCAACTCACGTGCCAT+GGG - chr5.1:11342385-11342404 None:intergenic 50.0%
CCATGTCGGAAGGTCAAATG+AGG + chr5.1:11342860-11342879 MS.gene047750:CDS 50.0%
CCTCATTTGACCTTCCGACA+TGG - chr5.1:11342863-11342882 None:intergenic 50.0%
GATTTATTTGGGTGGTGCGG+CGG + chr5.1:11342917-11342936 MS.gene047750:CDS 50.0%
GCGGATGCATTATCCTCTGT+GGG - chr5.1:11342943-11342962 None:intergenic 50.0%
GGAAGGTCAAATGAGGGAGT+TGG + chr5.1:11342867-11342886 MS.gene047750:CDS 50.0%
GTCACAAAACCACCCGTTGA+TGG - chr5.1:11343099-11343118 None:intergenic 50.0%
TAAAGCGGCCATGCAACCAT+CGG - chr5.1:11343168-11343187 None:intergenic 50.0%
TCACTCTCACCACCCTTCTT+CGG - chr5.1:11342766-11342785 None:intergenic 50.0%
TGCAGATGGAACAACTGTGG+TGG + chr5.1:11342984-11343003 MS.gene047750:CDS 50.0%
TGCGGATGCATTATCCTCTG+TGG - chr5.1:11342944-11342963 None:intergenic 50.0%
! AGGATCTGAAGCCAAAGCTC+GGG + chr5.1:11343455-11343474 MS.gene047750:CDS 50.0%
! AGGGCTTTGTGTTCCCATGT+GGG + chr5.1:11343047-11343066 MS.gene047750:CDS 50.0%
! AGGGTATCCTCAAACCGAAC+CGG - chr5.1:11342538-11342557 None:intergenic 50.0%
! CTTTGGCTTCAGATCCTTGG+TGG - chr5.1:11343452-11343471 None:intergenic 50.0%
! GAGCTTTGGCTTCAGATCCT+TGG - chr5.1:11343455-11343474 None:intergenic 50.0%
! GTTATCAGAGGAGCTTGGTG+TGG + chr5.1:11343215-11343234 MS.gene047750:CDS 50.0%
! TAGGGCTTTGTGTTCCCATG+TGG + chr5.1:11343046-11343065 MS.gene047750:CDS 50.0%
! TCTGGAGCCAACAGCTACTA+AGG + chr5.1:11342660-11342679 MS.gene047750:CDS 50.0%
! TGGTACTGCAGCTTTTCCCA+TGG + chr5.1:11342366-11342385 MS.gene047750:CDS 50.0%
! TGTGTCTGAATCTGAGGTGG+CGG - chr5.1:11342137-11342156 None:intergenic 50.0%
!! TTGTGAACCGGTTCGGTTTG+AGG + chr5.1:11342528-11342547 MS.gene047750:CDS 50.0%
!!! GGTGGTTTTGTGACACACTG+TGG + chr5.1:11343105-11343124 MS.gene047750:CDS 50.0%
ACCGATGAACCGAAGAAGGG+TGG + chr5.1:11342754-11342773 MS.gene047750:CDS 55.0%
ACGGTGTTCCGATGGTTGCA+TGG + chr5.1:11343157-11343176 MS.gene047750:CDS 55.0%
CATGTGCAACTCACGTGCCA+TGG - chr5.1:11342386-11342405 None:intergenic 55.0%
CTTCTAGCCAGTCCTGGCAT+GGG + chr5.1:11342031-11342050 MS.gene047750:CDS 55.0%
GCAGTTCTTCTAGCCAGTCC+TGG + chr5.1:11342025-11342044 MS.gene047750:CDS 55.0%
GGAATTAGGTGTCCCATGCC+AGG - chr5.1:11342046-11342065 None:intergenic 55.0%
GGAGCCAACAGCTACTAAGG+CGG + chr5.1:11342663-11342682 MS.gene047750:CDS 55.0%
GGGTGCAGATGGAACAACTG+TGG + chr5.1:11342981-11343000 MS.gene047750:CDS 55.0%
GGTGAACACGTGGCAAGATC+TGG + chr5.1:11342642-11342661 MS.gene047750:CDS 55.0%
TCTTCTAGCCAGTCCTGGCA+TGG + chr5.1:11342030-11342049 MS.gene047750:CDS 55.0%
TTCAACGTTGCGGGTGCAGA+TGG + chr5.1:11342970-11342989 MS.gene047750:CDS 55.0%
TTGTCGGAGACATCGACAGG+AGG - chr5.1:11342220-11342239 None:intergenic 55.0%
! GAGGGAGTTGGCTTACGGTT+TGG + chr5.1:11342879-11342898 MS.gene047750:CDS 55.0%
! GGATCTGAAGCCAAAGCTCG+GGG + chr5.1:11343456-11343475 MS.gene047750:CDS 55.0%
! TGGAAGTGGTGGGACCATGT+CGG + chr5.1:11342846-11342865 MS.gene047750:CDS 55.0%
!! ATCAGAGGAGCTTGGTGTGG+CGG + chr5.1:11343218-11343237 MS.gene047750:CDS 55.0%
!! GTGGTGGATTACTTGCCGGA+GGG + chr5.1:11343000-11343019 MS.gene047750:CDS 55.0%
!! TGTGGTGGATTACTTGCCGG+AGG + chr5.1:11342999-11343018 MS.gene047750:CDS 55.0%
GAAGGCAACGACAACGGTGG+CGG + chr5.1:11343242-11343261 MS.gene047750:CDS 60.0%
GGCGGTGAAGGCAACGACAA+CGG + chr5.1:11343236-11343255 MS.gene047750:CDS 60.0%
GGCGGTTGTGACGACGAAGA+TGG - chr5.1:11342119-11342138 None:intergenic 60.0%
GGTGAAGGCAACGACAACGG+TGG + chr5.1:11343239-11343258 MS.gene047750:CDS 60.0%
TAGGTGTCCCATGCCAGGAC+TGG - chr5.1:11342041-11342060 None:intergenic 60.0%
TCAGCTTGTGGGGCCCACAT+GGG - chr5.1:11343063-11343082 None:intergenic 60.0%
! AGTGGTGGGACCATGTCGGA+AGG + chr5.1:11342850-11342869 MS.gene047750:CDS 60.0%
!! GAGTTGGCTTGACCGGCAAC+CGG + chr5.1:11342798-11342817 MS.gene047750:CDS 60.0%
CTCAGCTTGTGGGGCCCACA+TGG - chr5.1:11343064-11343083 None:intergenic 65.0%
TGACCGGCAACCGGCTGAGT+CGG + chr5.1:11342807-11342826 MS.gene047750:CDS 65.0%
! TGACCGACTCAGCCGGTTGC+CGG - chr5.1:11342813-11342832 None:intergenic 65.0%
!! GCAACGACAACGGTGGCGGA+GGG + chr5.1:11343246-11343265 MS.gene047750:CDS 65.0%
!! GGAGCTTGGTGTGGCGGTGA+AGG + chr5.1:11343224-11343243 MS.gene047750:CDS 65.0%
! GGCAACGACAACGGTGGCGG+AGG + chr5.1:11343245-11343264 MS.gene047750:CDS 70.0%
!! ACGACAACGGTGGCGGAGGG+TGG + chr5.1:11343249-11343268 MS.gene047750:CDS 70.0%
! GGTGGTGCGGCGGCCCACAG+AGG + chr5.1:11342927-11342946 MS.gene047750:CDS 80.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 11342004 11343485 11342004 ID=MS.gene047750
chr5.1 mRNA 11342004 11343485 11342004 ID=MS.gene047750.t1;Parent=MS.gene047750
chr5.1 exon 11342004 11343485 11342004 ID=MS.gene047750.t1.exon1;Parent=MS.gene047750.t1
chr5.1 CDS 11342004 11343485 11342004 ID=cds.MS.gene047750.t1;Parent=MS.gene047750.t1
Gene Sequence

>MS.gene047750

ATGGTGTCCCAAAAAACTCATGCAGTTCTTCTAGCCAGTCCTGGCATGGGACACCTAATTCCCACCATTGAATTAGGCAAACGTCTTACCACCCACCAAAATTTCGACGTAACCATCTTCGTCGTCACAACCGCCACCTCAGATTCAGACACATCAAAATCACATATACTTCAACAAATATCAAGCCCTAATAGCCTCGACATCATTGTAACACCTCCTGTCGATGTCTCCGACAAACTTGACCCAAACAATCCATCCTTGGGATTACAAATTGTTCTAACCATGGTTGAATCTCTTCCTTTTATTCGATCACAAATCTTATCCATGAAGAATCCTCCATCTGTTCTTATCGTGGACCTCTTTGGTACTGCAGCTTTTCCCATGGCACGTGAGTTGCACATGTCTTGTTACGTTTTCTTTGCAACCAATGCTTGGTTCACTGCTGTTAACTTATACCTTCCTTTCATCACAGATGAAGCTTTTTCACGCCATGCTAAGAATCATGAACCGCTTTCGATTCTTGGTTGTGAACCGGTTCGGTTTGAGGATACCCTTGAAACATTTGTTGCACCTTGGGGACCTATTCATAAAAGTTACGTTGAAGTCACAAGGGAAATATTAACCGTTGATGGGATTTTGGTGAACACGTGGCAAGATCTGGAGCCAACAGCTACTAAGGCGGTTATTGAAAATGGGGTTTTAGGAAAGTTTGTGAAAGGACCGGTTTATCCGATTGGACCGCTAGTAAGAACCGATGAACCGAAGAAGGGTGGTGAGAGTGAAAATTTAATTTTGAGTTGGCTTGACCGGCAACCGGCTGAGTCGGTCATATATTTGTCATTTGGAAGTGGTGGGACCATGTCGGAAGGTCAAATGAGGGAGTTGGCTTACGGTTTGGAGCTGAGTCAGCAGCGATTTATTTGGGTGGTGCGGCGGCCCACAGAGGATAATGCATCCGCAACGTTTTTCAACGTTGCGGGTGCAGATGGAACAACTGTGGTGGATTACTTGCCGGAGGGATTTTTGAATAGGACAAAAGAGGTAGGGCTTTGTGTTCCCATGTGGGCCCCACAAGCTGAGATATTAAAACATCCATCAACGGGTGGTTTTGTGACACACTGTGGTTGGAATTCTGTGTTGGAGAGTATTCTTAACGGTGTTCCGATGGTTGCATGGCCGCTTTATGCAGAGCAGAAGATGAATGCTACTATGTTATCAGAGGAGCTTGGTGTGGCGGTGAAGGCAACGACAACGGTGGCGGAGGGTGGTGTTGTTTGTAGAGAAAATATAGCGGAAGTGATTAGAAGAGTGATGGTTGATGAAGAAGGTGTAGCTATGAGAGTTAAAGTTAATGAGTATAAGGTAAGTGGAGAGAAAGCTTCGTCTGTGTTTGGTTCTTCTCATGAATCTTTTTGTAAGATGGCAAAAGATTGTGAACTTTATCTCCACCAAGGATCTGAAGCCAAAGCTCGGGGTGCTTAA
Protein sequence

>MS.gene047750.t1

MVSQKTHAVLLASPGMGHLIPTIELGKRLTTHQNFDVTIFVVTTATSDSDTSKSHILQQISSPNSLDIIVTPPVDVSDKLDPNNPSLGLQIVLTMVESLPFIRSQILSMKNPPSVLIVDLFGTAAFPMARELHMSCYVFFATNAWFTAVNLYLPFITDEAFSRHAKNHEPLSILGCEPVRFEDTLETFVAPWGPIHKSYVEVTREILTVDGILVNTWQDLEPTATKAVIENGVLGKFVKGPVYPIGPLVRTDEPKKGGESENLILSWLDRQPAESVIYLSFGSGGTMSEGQMRELAYGLELSQQRFIWVVRRPTEDNASATFFNVAGADGTTVVDYLPEGFLNRTKEVGLCVPMWAPQAEILKHPSTGGFVTHCGWNSVLESILNGVPMVAWPLYAEQKMNATMLSEELGVAVKATTTVAEGGVVCRENIAEVIRRVMVDEEGVAMRVKVNEYKVSGEKASSVFGSSHESFCKMAKDCELYLHQGSEAKARGA