AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89850.t1 MTR_5g019580 90.669 493 46 0 1 493 1 493 0.0 934
MS.gene89850.t1 MTR_5g019580 85.193 493 45 1 1 493 53 517 0.0 860
MS.gene89850.t1 MTR_8g074550 45.791 487 241 12 6 476 7 486 1.01e-136 404
MS.gene89850.t1 MTR_0078s0010 41.079 482 265 11 2 479 1 467 3.91e-108 330
MS.gene89850.t1 MTR_7g117170 40.890 472 258 10 9 475 17 472 2.69e-106 325
MS.gene89850.t1 MTR_0078s0060 40.289 484 267 12 2 480 1 467 1.64e-104 320
MS.gene89850.t1 MTR_8g027885 39.872 469 259 11 10 475 21 469 3.11e-104 320
MS.gene89850.t1 MTR_7g047030 39.627 482 272 11 2 479 1 467 5.20e-104 319
MS.gene89850.t1 MTR_7g047270 39.627 482 272 11 2 479 1 467 5.20e-104 319
MS.gene89850.t1 MTR_8g027870 38.675 468 266 9 10 475 21 469 1.71e-102 315
MS.gene89850.t1 MTR_8g006710 37.243 486 269 13 2 475 1 462 2.51e-101 312
MS.gene89850.t1 MTR_8g006730 37.525 493 273 13 2 484 1 468 3.68e-101 311
MS.gene89850.t1 MTR_8g009055 38.703 478 274 11 2 475 1 463 1.29e-100 310
MS.gene89850.t1 MTR_0184s0040 38.669 481 277 10 2 479 16 481 2.54e-100 310
MS.gene89850.t1 MTR_0078s0190 38.669 481 277 10 2 479 16 481 2.54e-100 310
MS.gene89850.t1 MTR_8g008990 38.333 480 275 12 2 475 1 465 1.68e-99 307
MS.gene89850.t1 MTR_6g023665 37.292 480 276 12 2 475 8 468 2.37e-99 307
MS.gene89850.t1 MTR_8g009073 37.838 481 272 11 2 475 1 461 7.73e-98 303
MS.gene89850.t1 MTR_6g488280 36.743 479 280 12 2 475 1 461 1.78e-97 302
MS.gene89850.t1 MTR_0428s0010 36.743 479 280 12 2 475 1 461 1.78e-97 302
MS.gene89850.t1 MTR_8g009050 37.736 477 280 10 2 475 1 463 9.46e-96 298
MS.gene89850.t1 MTR_8g006270 37.901 467 270 13 4 467 3 452 1.25e-94 295
MS.gene89850.t1 MTR_1g019510 35.908 479 283 11 2 475 1 460 1.22e-91 287
MS.gene89850.t1 MTR_0184s0030 35.185 486 289 11 2 479 1 468 8.52e-90 282
MS.gene89850.t1 MTR_8g009067 36.093 471 282 9 7 474 6 460 2.41e-88 279
MS.gene89850.t1 MTR_8g009063 34.801 477 294 8 1 474 7 469 8.75e-88 278
MS.gene89850.t1 MTR_8g465670 35.091 493 274 16 1 474 1 466 6.58e-87 275
MS.gene89850.t1 MTR_8g012635 35.062 482 291 11 2 475 1 468 1.08e-86 275
MS.gene89850.t1 MTR_8g077590 35.714 476 280 13 6 475 8 463 1.54e-86 274
MS.gene89850.t1 MTR_6g005600 35.146 478 294 8 5 479 4 468 4.69e-86 273
MS.gene89850.t1 MTR_8g006260 35.000 480 286 13 5 475 4 466 3.29e-84 268
MS.gene89850.t1 MTR_7g046490 34.801 477 289 13 2 474 1 459 1.03e-83 266
MS.gene89850.t1 MTR_8g008970 36.100 482 279 11 2 475 1 461 1.88e-83 274
MS.gene89850.t1 MTR_8g008970 37.102 283 145 6 196 474 531 784 1.31e-46 173
MS.gene89850.t1 MTR_8g012650 34.461 473 290 10 2 467 1 460 8.43e-82 262
MS.gene89850.t1 MTR_8g009073 39.535 344 194 6 134 475 1 332 5.29e-81 255
MS.gene89850.t1 MTR_8g012745 35.010 477 287 11 2 471 1 461 1.62e-80 258
MS.gene89850.t1 MTR_6g033625 32.998 497 272 12 5 476 2 462 2.72e-79 255
MS.gene89850.t1 MTR_8g006220 34.861 502 272 19 2 475 1 475 3.88e-79 255
MS.gene89850.t1 MTR_6g033725 34.156 486 288 12 5 481 2 464 1.47e-76 248
MS.gene89850.t1 MTR_8g009067 37.429 350 209 4 125 474 3 342 2.70e-76 244
MS.gene89850.t1 MTR_3g009510 33.607 488 294 11 4 476 2 474 4.16e-76 247
MS.gene89850.t1 MTR_8g012630 34.426 488 238 15 2 479 1 416 2.86e-74 240
MS.gene89850.t1 MTR_6g033615 32.653 490 269 11 5 476 2 448 4.34e-71 233
MS.gene89850.t1 MTR_6g033660 32.787 488 286 10 9 481 6 466 2.91e-69 229
MS.gene89850.t1 MTR_5g098930 32.505 483 287 16 4 471 2 460 1.41e-67 224
MS.gene89850.t1 MTR_6g033675 32.099 486 301 9 5 481 2 467 1.69e-67 224
MS.gene89850.t1 MTR_5g090630 32.238 487 287 14 4 474 2 461 1.24e-66 222
MS.gene89850.t1 MTR_8g012730 36.893 309 167 3 147 454 3 284 5.61e-66 215
MS.gene89850.t1 MTR_5g090700 32.515 489 288 16 4 471 2 469 5.33e-65 218
MS.gene89850.t1 MTR_2g040530 32.179 491 285 15 5 477 3 463 9.36e-64 214
MS.gene89850.t1 MTR_5g090670 32.121 495 288 16 4 474 2 472 3.69e-62 210
MS.gene89850.t1 MTR_5g090580 30.879 489 300 15 4 474 2 470 2.52e-61 208
MS.gene89850.t1 MTR_2g046820 30.723 498 281 14 5 477 3 461 6.41e-61 207
MS.gene89850.t1 MTR_5g090610 30.247 486 293 15 4 474 2 456 1.65e-60 206
MS.gene89850.t1 MTR_5g090620 30.691 492 298 14 4 474 2 471 1.86e-60 206
MS.gene89850.t1 MTR_5g090600 31.429 490 275 16 4 474 2 449 5.77e-60 204
MS.gene89850.t1 MTR_5g090660 31.275 502 306 16 4 489 2 480 6.11e-59 204
MS.gene89850.t1 MTR_1g019520 45.000 220 116 3 265 484 4 218 4.36e-58 192
MS.gene89850.t1 MTR_5g070090 30.223 493 289 18 2 477 6 460 7.05e-58 199
MS.gene89850.t1 MTR_2g046750 30.237 506 276 17 5 477 3 464 7.98e-56 193
MS.gene89850.t1 MTR_5g070040 30.584 497 281 20 2 474 6 462 9.77e-55 190
MS.gene89850.t1 MTR_5g087620 31.670 521 270 19 4 477 7 488 1.13e-51 183
MS.gene89850.t1 MTR_4g485630 29.341 501 295 19 3 477 5 472 3.47e-46 167
MS.gene89850.t1 MTR_6g014250 26.337 505 312 14 1 477 4 476 2.38e-45 165
MS.gene89850.t1 MTR_0009s0240 29.249 506 274 20 1 474 1 454 3.37e-45 165
MS.gene89850.t1 MTR_2g098430 29.630 513 270 20 2 465 1 471 8.57e-45 164
MS.gene89850.t1 MTR_4g094220 27.701 509 290 17 1 470 1 470 4.50e-44 162
MS.gene89850.t1 MTR_4g082820 28.974 497 296 17 1 476 1 461 8.39e-44 161
MS.gene89850.t1 MTR_7g070800 27.680 513 279 20 7 474 6 471 3.83e-43 159
MS.gene89850.t1 MTR_6g014220 26.535 505 311 14 1 477 4 476 6.80e-43 159
MS.gene89850.t1 MTR_8g066610 29.207 517 294 18 3 484 5 484 1.63e-42 158
MS.gene89850.t1 MTR_5g464760 28.261 506 289 19 4 474 9 475 1.70e-42 157
MS.gene89850.t1 MTR_8g090095 29.372 446 274 14 14 447 32 448 3.84e-42 157
MS.gene89850.t1 MTR_6g038300 28.081 495 287 16 7 480 11 457 3.88e-42 156
MS.gene89850.t1 MTR_6g014170 27.723 505 303 16 1 484 4 467 4.07e-42 156
MS.gene89850.t1 MTR_4g485640 29.026 503 284 19 8 478 210 671 4.67e-42 159
MS.gene89850.t1 MTR_7g011470 28.119 505 287 16 1 477 4 460 4.83e-42 156
MS.gene89850.t1 MTR_7g070660 34.752 282 153 7 211 479 217 480 6.03e-42 156
MS.gene89850.t1 MTR_7g070860 27.767 515 274 18 1 474 1 458 6.16e-42 156
MS.gene89850.t1 MTR_7g011470 28.600 507 286 17 1 477 4 464 6.93e-42 155
MS.gene89850.t1 MTR_8g466240 28.942 501 274 16 5 477 6 452 9.41e-42 155
MS.gene89850.t1 MTR_4g031800 28.803 493 273 17 17 474 19 468 1.15e-41 155
MS.gene89850.t1 MTR_7g102490 28.488 516 299 19 1 477 1 485 2.09e-41 155
MS.gene89850.t1 MTR_6g014290 25.247 507 315 13 1 477 4 476 2.77e-41 154
MS.gene89850.t1 MTR_4g064987 28.016 489 291 19 1 476 1 441 6.39e-41 152
MS.gene89850.t1 MTR_1g029540 37.559 213 124 3 242 454 232 435 6.54e-41 153
MS.gene89850.t1 MTR_5g045960 28.235 510 301 18 3 477 5 484 1.05e-40 153
MS.gene89850.t1 MTR_4g008630 36.842 247 140 6 210 454 206 438 1.10e-40 152
MS.gene89850.t1 MTR_8g059425 27.059 510 310 16 4 484 7 483 1.41e-40 152
MS.gene89850.t1 MTR_7g070810 34.875 281 152 6 211 479 215 476 1.90e-40 152
MS.gene89850.t1 MTR_3g008010 26.285 506 311 17 1 477 4 476 2.87e-40 151
MS.gene89850.t1 MTR_6g038240 28.713 505 280 19 3 481 7 457 3.61e-40 150
MS.gene89850.t1 MTR_1g032490 26.518 494 306 14 7 477 10 469 3.97e-40 151
MS.gene89850.t1 MTR_3g009490 40.642 187 107 3 291 476 3 186 4.11e-40 143
MS.gene89850.t1 MTR_7g055710 29.672 519 274 20 1 471 1 476 4.23e-40 151
MS.gene89850.t1 MTR_5g464810 28.119 505 291 19 6 477 11 476 5.37e-40 150
MS.gene89850.t1 MTR_5g064240 28.119 505 291 19 6 477 11 476 5.37e-40 150
MS.gene89850.t1 MTR_0891s0010 30.508 295 170 8 200 486 27 294 5.63e-40 146
MS.gene89850.t1 MTR_7g070940 35.036 274 148 6 211 474 215 468 9.02e-40 150
MS.gene89850.t1 MTR_6g013990 33.333 294 157 7 197 480 215 479 9.61e-40 150
MS.gene89850.t1 MTR_8g009840 41.799 189 106 2 286 474 337 521 1.46e-39 150
MS.gene89850.t1 MTR_6g014040 27.907 516 289 21 3 477 6 479 1.66e-39 149
MS.gene89850.t1 MTR_3g049970 25.605 496 308 12 7 477 9 468 2.66e-39 149
MS.gene89850.t1 MTR_5g058320 25.904 498 316 13 1 480 4 466 3.18e-39 148
MS.gene89850.t1 MTR_4g064987 27.621 496 290 20 1 476 1 447 4.28e-39 147
MS.gene89850.t1 MTR_2g008210 26.824 507 301 15 3 477 7 475 5.11e-39 148
MS.gene89850.t1 MTR_3g069710 33.922 283 153 6 195 471 190 444 5.23e-39 147
MS.gene89850.t1 MTR_1g107350 25.562 489 317 13 7 477 8 467 6.05e-39 147
MS.gene89850.t1 MTR_7g071040 27.237 514 292 16 3 474 13 486 6.54e-39 148
MS.gene89850.t1 MTR_3g479520 26.975 519 297 19 2 481 10 485 7.50e-39 147
MS.gene89850.t1 MTR_4g024020 26.019 515 304 15 5 477 7 486 7.55e-39 148
MS.gene89850.t1 MTR_8g064870 26.000 500 299 14 9 477 13 472 8.05e-39 147
MS.gene89850.t1 MTR_0036s0220 26.800 500 302 17 7 477 12 476 2.12e-38 146
MS.gene89850.t1 MTR_7g070740 26.931 505 302 17 4 474 8 479 2.38e-38 146
MS.gene89850.t1 MTR_6g014050 31.959 291 159 8 197 477 218 479 2.78e-38 146
MS.gene89850.t1 MTR_7g070780 27.290 535 308 18 1 493 1 496 3.50e-38 146
MS.gene89850.t1 MTR_8g083290 29.209 493 282 16 7 471 3 456 4.04e-38 145
MS.gene89850.t1 MTR_7g070930 26.744 516 292 16 3 474 10 483 4.04e-38 146
MS.gene89850.t1 MTR_4g108250 28.200 539 294 17 3 493 7 500 4.93e-38 145
MS.gene89850.t1 MTR_1g107315 26.800 500 305 15 5 479 6 469 1.44e-37 144
MS.gene89850.t1 MTR_6g014270 27.255 521 305 20 1 484 1 484 3.09e-37 143
MS.gene89850.t1 MTR_0078s0200 29.688 320 204 8 2 313 1 307 3.27e-37 139
MS.gene89850.t1 MTR_6g014200 27.953 508 302 18 1 477 1 475 3.63e-37 143
MS.gene89850.t1 MTR_6g038200 27.311 476 262 18 7 454 11 430 6.03e-37 142
MS.gene89850.t1 MTR_6g013920 31.230 317 177 8 173 477 190 477 6.55e-37 142
MS.gene89850.t1 MTR_6g013450 25.838 507 313 14 5 480 8 482 6.95e-37 142
MS.gene89850.t1 MTR_1g107375 26.200 500 293 15 7 481 8 456 8.80e-37 141
MS.gene89850.t1 MTR_6g013440 27.326 516 297 20 3 480 7 482 9.63e-37 142
MS.gene89850.t1 MTR_7g102460 27.148 512 309 17 1 477 1 483 1.11e-36 142
MS.gene89850.t1 MTR_6g014020 26.378 508 310 15 1 477 4 478 1.25e-36 141
MS.gene89850.t1 MTR_3g479490 27.011 522 293 23 2 481 1 476 1.30e-36 141
MS.gene89850.t1 MTR_5g035580 28.252 492 276 17 3 471 9 446 1.62e-36 140
MS.gene89850.t1 MTR_7g012120 32.432 296 164 8 206 479 209 490 1.74e-36 141
MS.gene89850.t1 MTR_7g102550 35.862 290 141 9 207 474 214 480 2.13e-36 140
MS.gene89850.t1 MTR_3g079480 26.975 519 295 21 3 481 17 491 2.86e-36 140
MS.gene89850.t1 MTR_6g038230 28.723 470 263 17 7 454 11 430 2.98e-36 140
MS.gene89850.t1 MTR_4g094920 35.000 240 134 5 241 471 246 472 5.72e-36 140
MS.gene89850.t1 MTR_6g013900 30.284 317 180 8 173 477 190 477 5.93e-36 139
MS.gene89850.t1 MTR_3g479610 29.930 284 157 8 211 481 61 315 7.40e-36 135
MS.gene89850.t1 MTR_7g070610 33.555 301 162 10 211 493 219 499 1.03e-35 139
MS.gene89850.t1 MTR_6g038220 27.872 470 266 17 7 454 11 429 1.04e-35 138
MS.gene89850.t1 MTR_4g117960 26.411 496 307 19 10 477 14 479 1.08e-35 139
MS.gene89850.t1 MTR_7g013240 25.161 465 285 15 7 457 6 421 1.16e-35 138
MS.gene89850.t1 MTR_8g064880 27.352 457 273 12 9 438 11 435 1.60e-35 138
MS.gene89850.t1 MTR_8g071070 26.915 483 293 18 1 457 1 449 1.73e-35 138
MS.gene89850.t1 MTR_7g070910 25.536 513 300 19 4 474 8 480 1.76e-35 138
MS.gene89850.t1 MTR_0536s0020 32.082 293 167 10 206 480 203 481 1.89e-35 138
MS.gene89850.t1 MTR_4g128690 31.302 361 199 12 116 467 121 441 2.59e-35 137
MS.gene89850.t1 MTR_1g107365 25.502 498 300 14 7 481 45 494 2.69e-35 138
MS.gene89850.t1 MTR_5g035560 28.364 483 287 15 3 471 7 444 3.53e-35 137
MS.gene89850.t1 MTR_5g072830 26.899 487 291 19 7 477 10 447 3.92e-35 136
MS.gene89850.t1 MTR_0477s0010 34.061 229 126 5 252 477 109 315 3.95e-35 134
MS.gene89850.t1 MTR_0288s0020 25.294 510 294 17 1 477 4 459 4.28e-35 137
MS.gene89850.t1 MTR_6g014240 27.075 506 293 17 1 484 1 452 4.44e-35 136
MS.gene89850.t1 MTR_4g117890 27.383 493 272 19 17 471 23 467 4.74e-35 137
MS.gene89850.t1 MTR_8g006230 36.683 199 119 3 116 313 55 247 4.78e-35 132
MS.gene89850.t1 MTR_7g013200 31.651 218 126 5 237 452 220 416 5.32e-35 136
MS.gene89850.t1 MTR_1g107360 29.630 270 149 5 212 471 216 454 5.37e-35 136
MS.gene89850.t1 MTR_4g095008 26.283 487 300 16 9 474 12 460 6.36e-35 137
MS.gene89850.t1 MTR_6g014190 33.803 213 119 3 265 477 95 285 6.41e-35 132
MS.gene89850.t1 MTR_4g082810 37.500 208 115 5 200 405 201 395 6.43e-35 135
MS.gene89850.t1 MTR_6g014310 29.299 314 187 9 173 477 192 479 7.61e-35 136
MS.gene89850.t1 MTR_7g013260 30.249 281 154 9 185 457 176 422 8.72e-35 135
MS.gene89850.t1 MTR_6g014150 33.186 226 129 4 259 484 279 482 9.29e-35 136
MS.gene89850.t1 MTR_6g011340 30.556 288 161 8 200 477 220 478 9.69e-35 136
MS.gene89850.t1 MTR_2g034990 33.984 256 137 10 242 477 237 480 9.70e-35 136
MS.gene89850.t1 MTR_8g007585 35.211 213 116 4 265 477 200 390 1.05e-34 134
MS.gene89850.t1 MTR_5g016660 27.290 513 297 17 5 478 8 483 1.34e-34 135
MS.gene89850.t1 MTR_6g013960 26.139 505 309 16 4 477 7 478 1.73e-34 135
MS.gene89850.t1 MTR_6g035295 27.219 507 290 19 18 484 23 490 2.00e-34 135
MS.gene89850.t1 MTR_4g485590 38.462 221 106 6 201 413 181 379 2.28e-34 134
MS.gene89850.t1 MTR_3g479470 26.070 514 297 17 3 477 9 478 4.47e-34 134
MS.gene89850.t1 MTR_2g035040 31.077 325 171 13 181 471 74 379 4.76e-34 132
MS.gene89850.t1 MTR_4g117950 30.025 393 209 16 110 474 104 458 5.01e-34 134
MS.gene89850.t1 MTR_1g062380 26.786 504 309 15 7 477 16 492 5.16e-34 134
MS.gene89850.t1 MTR_7g117405 28.000 500 299 18 7 477 12 479 5.91e-34 134
MS.gene89850.t1 MTR_6g014187 25.341 513 319 14 4 485 7 486 8.97e-34 133
MS.gene89850.t1 MTR_5g040030 29.000 500 291 20 18 484 25 493 1.06e-33 133
MS.gene89850.t1 MTR_1g040310 36.111 252 129 8 244 479 249 484 1.09e-33 133
MS.gene89850.t1 MTR_1g107285 28.283 297 170 6 197 481 201 466 1.22e-33 133
MS.gene89850.t1 MTR_5g045970 33.566 286 152 9 211 477 225 491 1.30e-33 133
MS.gene89850.t1 MTR_6g035265 27.848 395 233 13 107 477 106 472 1.77e-33 132
MS.gene89850.t1 MTR_6g035185 28.715 397 225 17 110 477 114 481 1.79e-33 132
MS.gene89850.t1 MTR_4g128720 26.392 485 302 14 4 476 12 453 2.47e-33 132
MS.gene89850.t1 MTR_4g118000 33.032 221 129 4 265 477 256 465 2.91e-33 132
MS.gene89850.t1 MTR_7g470610 36.441 236 111 7 211 431 74 285 4.37e-33 127
MS.gene89850.t1 MTR_7g070583 36.441 236 111 7 211 431 74 285 4.37e-33 127
MS.gene89850.t1 MTR_7g013220 24.573 468 286 16 7 452 5 427 5.72e-33 130
MS.gene89850.t1 MTR_8g083280 32.342 269 150 5 212 477 221 460 6.13e-33 130
MS.gene89850.t1 MTR_7g039550 35.887 248 130 6 240 474 26 257 6.25e-33 126
MS.gene89850.t1 MTR_4g117980 32.042 284 170 9 207 477 207 480 8.84e-33 130
MS.gene89850.t1 MTR_5g027210 31.621 253 150 3 205 442 206 450 1.16e-32 130
MS.gene89850.t1 MTR_0536s0010 25.558 493 281 20 17 474 31 472 1.76e-32 130
MS.gene89850.t1 MTR_6g014300 25.743 505 303 19 3 480 8 467 2.18e-32 129
MS.gene89850.t1 MTR_8g044140 29.339 484 269 23 33 479 2 449 2.41e-32 129
MS.gene89850.t1 MTR_5g066410 36.245 229 116 7 236 452 205 415 2.73e-32 128
MS.gene89850.t1 MTR_7g067120 34.199 231 122 7 233 459 207 411 4.73e-32 127
MS.gene89850.t1 MTR_5g072840 27.988 343 206 9 145 477 136 447 5.23e-32 128
MS.gene89850.t1 MTR_7g080900 25.859 495 287 17 3 471 8 448 5.42e-32 128
MS.gene89850.t1 MTR_2g035020 30.769 286 167 9 206 474 206 477 5.44e-32 128
MS.gene89850.t1 MTR_4g485620 28.421 380 234 8 107 471 91 447 7.01e-32 127
MS.gene89850.t1 MTR_3g084540 26.441 503 312 17 2 477 1 472 8.11e-32 127
MS.gene89850.t1 MTR_5g016480 24.361 509 306 17 4 477 5 469 1.03e-31 127
MS.gene89850.t1 MTR_7g067330 33.621 232 122 7 233 459 207 411 1.06e-31 127
MS.gene89850.t1 MTR_8g088560 26.639 488 288 17 7 471 10 450 1.11e-31 127
MS.gene89850.t1 MTR_7g102560 31.399 293 159 8 211 481 214 486 1.19e-31 127
MS.gene89850.t1 MTR_1g107380 28.344 314 183 9 178 477 186 471 1.21e-31 127
MS.gene89850.t1 MTR_7g102450 27.381 504 289 18 7 477 11 470 1.33e-31 127
MS.gene89850.t1 MTR_3g069690 25.971 489 298 15 3 474 4 445 1.54e-31 127
MS.gene89850.t1 MTR_6g078320 25.833 480 313 15 7 466 11 467 1.58e-31 127
MS.gene89850.t1 MTR_8g043470 31.364 220 129 3 265 484 186 383 1.70e-31 125
MS.gene89850.t1 MTR_2g059240 26.457 446 254 17 7 423 13 413 1.73e-31 127
MS.gene89850.t1 MTR_5g072820 26.899 487 291 19 7 477 10 447 2.30e-31 126
MS.gene89850.t1 MTR_4g123553 35.160 219 118 4 239 452 236 435 3.09e-31 126
MS.gene89850.t1 MTR_5g072810 30.545 275 150 8 212 477 210 452 3.72e-31 125
MS.gene89850.t1 MTR_5g029800 33.610 241 136 7 256 481 255 486 3.81e-31 126
MS.gene89850.t1 MTR_8g007565 36.000 225 118 7 236 452 233 439 4.20e-31 125
MS.gene89850.t1 MTR_6g042310 27.601 471 266 14 7 452 18 438 4.80e-31 125
MS.gene89850.t1 MTR_2g008226 28.092 477 270 20 7 452 10 444 6.76e-31 125
MS.gene89850.t1 MTR_3g084530 26.482 506 307 17 2 477 1 471 8.71e-31 124
MS.gene89850.t1 MTR_4g077960 36.530 219 115 5 239 452 213 412 8.76e-31 124
MS.gene89850.t1 MTR_5g031830 26.946 501 281 23 7 471 12 463 9.54e-31 124
MS.gene89850.t1 MTR_8g007650 36.000 225 118 7 236 452 233 439 9.65e-31 124
MS.gene89850.t1 MTR_7g070870 32.472 271 154 6 185 445 196 447 9.74e-31 124
MS.gene89850.t1 MTR_7g080940 25.956 497 286 18 1 471 5 445 9.75e-31 124
MS.gene89850.t1 MTR_7g071050 34.685 222 120 4 248 459 214 420 1.52e-30 123
MS.gene89850.t1 MTR_7g080935 25.451 499 286 17 1 471 5 445 1.63e-30 124
MS.gene89850.t1 MTR_2086s0010 31.500 200 113 5 287 486 1 176 2.42e-30 116
MS.gene89850.t1 MTR_1996s0010 31.500 200 113 5 287 486 1 176 2.42e-30 116
MS.gene89850.t1 MTR_5g031840 30.175 285 152 10 200 471 204 454 2.51e-30 123
MS.gene89850.t1 MTR_5g090690 44.138 145 73 4 242 383 166 305 2.53e-30 122
MS.gene89850.t1 MTR_5g039900 27.733 494 282 21 18 474 24 479 2.57e-30 124
MS.gene89850.t1 MTR_8g032950 33.202 253 142 8 243 477 236 479 2.74e-30 123
MS.gene89850.t1 MTR_2g008220 33.463 257 141 6 201 452 208 439 4.07e-30 122
MS.gene89850.t1 MTR_5g072860 24.899 494 289 15 7 471 18 458 5.68e-30 122
MS.gene89850.t1 MTR_7g013180 25.157 477 297 16 7 464 5 440 6.25e-30 122
MS.gene89850.t1 MTR_3g084520 24.950 501 321 16 2 477 1 471 1.74e-29 121
MS.gene89850.t1 MTR_8g068340 35.945 217 117 5 242 454 246 444 1.88e-29 120
MS.gene89850.t1 MTR_7g102520 33.591 259 134 7 242 477 244 487 1.93e-29 121
MS.gene89850.t1 MTR_5g031860 25.498 502 286 23 7 471 12 462 2.50e-29 120
MS.gene89850.t1 MTR_8g068330 33.333 261 138 6 202 454 208 440 3.12e-29 120
MS.gene89850.t1 MTR_8g068360 30.744 309 164 9 173 454 158 443 3.75e-29 120
MS.gene89850.t1 MTR_2g008225 35.484 217 116 5 241 452 243 440 7.14e-29 119
MS.gene89850.t1 MTR_5g067170 30.824 279 170 8 206 471 204 472 7.67e-29 119
MS.gene89850.t1 MTR_3g031400 23.554 484 286 13 6 467 17 438 8.90e-29 119
MS.gene89850.t1 MTR_5g004940 31.579 228 117 4 244 471 182 370 1.90e-28 117
MS.gene89850.t1 MTR_7g070760 33.175 211 92 4 211 414 32 200 2.44e-28 112
MS.gene89850.t1 MTR_6g036650 27.097 465 283 15 7 452 18 445 3.10e-28 117
MS.gene89850.t1 MTR_4g059370 37.500 184 100 3 267 447 190 361 5.84e-28 115
MS.gene89850.t1 MTR_3g031450 22.793 487 308 12 6 477 17 450 6.58e-28 116
MS.gene89850.t1 MTR_7g080950 29.412 272 161 8 206 471 194 440 7.67e-28 116
MS.gene89850.t1 MTR_5g075440 23.762 505 302 18 6 482 9 458 1.91e-27 115
MS.gene89850.t1 MTR_2g046620 34.361 227 124 6 239 459 237 444 2.73e-27 114
MS.gene89850.t1 MTR_3g435310 34.804 204 110 5 253 452 210 394 2.06e-26 111
MS.gene89850.t1 MTR_5g090650 25.815 368 212 11 4 360 2 319 3.04e-25 106
MS.gene89850.t1 MTR_1g090270 26.164 451 285 16 4 442 12 426 1.72e-24 106
MS.gene89850.t1 MTR_4g079270 30.769 221 120 5 240 455 241 433 2.65e-24 105
MS.gene89850.t1 MTR_4g079250 30.222 225 135 5 259 477 248 456 7.39e-24 104
MS.gene89850.t1 MTR_5g098960 32.046 259 135 10 197 444 197 425 8.02e-23 101
MS.gene89850.t1 MTR_6g014185 28.625 269 141 9 210 477 125 343 6.15e-22 97.8
MS.gene89850.t1 MTR_2g014900 28.814 236 143 5 208 443 208 418 7.63e-22 98.6
MS.gene89850.t1 MTR_5g066390 31.818 176 98 4 302 477 60 213 8.96e-22 94.0
MS.gene89850.t1 MTR_8g056740 24.227 388 218 13 107 489 47 363 5.09e-21 95.5
MS.gene89850.t1 MTR_0536s0030 35.948 153 86 5 336 477 199 350 1.27e-20 93.6
MS.gene89850.t1 MTR_1g107325 31.544 149 95 2 329 477 210 351 3.32e-20 92.4
MS.gene89850.t1 MTR_6g014000 35.075 134 80 2 343 476 27 153 4.22e-20 93.6
MS.gene89850.t1 MTR_7g070995 34.375 128 76 2 355 474 13 140 9.84e-20 86.7
MS.gene89850.t1 MTR_2g083380 31.687 243 136 6 240 476 258 476 1.19e-19 92.0
MS.gene89850.t1 MTR_2g083430 32.227 211 118 5 240 449 241 427 2.92e-19 90.5
MS.gene89850.t1 MTR_6g014160 26.984 252 117 9 200 441 202 396 6.01e-19 89.4
MS.gene89850.t1 MTR_2g083480 30.612 245 142 7 233 473 232 452 1.76e-18 88.2
MS.gene89850.t1 MTR_1g090280 32.051 156 94 3 287 442 133 276 1.73e-17 83.6
MS.gene89850.t1 MTR_2g083490 33.175 211 116 5 240 449 241 427 2.14e-17 85.1
MS.gene89850.t1 MTR_2g083420 27.835 291 156 9 199 477 184 432 6.79e-17 83.2
MS.gene89850.t1 MTR_6g052375 28.241 216 124 4 148 360 7 194 1.64e-16 80.9
MS.gene89850.t1 MTR_2g083390 28.629 248 127 9 233 477 232 432 2.31e-15 78.6
MS.gene89850.t1 MTR_6g014186 22.807 513 284 22 1 477 1 437 1.12e-13 73.2
MS.gene89850.t1 MTR_2g086283 29.412 187 90 5 297 476 186 337 3.75e-13 70.9
MS.gene89850.t1 MTR_0184s0010 41.489 94 53 1 386 479 4 95 1.20e-12 64.3
MS.gene89850.t1 MTR_6g005660 25.191 262 185 5 5 263 4 257 7.31e-12 65.9
MS.gene89850.t1 MTR_3g009500 26.415 265 176 9 5 258 3 259 7.64e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89850.t1 AT3G50740 47.976 494 241 9 5 493 5 487 9.46e-161 465
MS.gene89850.t1 AT5G66690 45.639 493 248 9 5 493 5 481 1.23e-153 446
MS.gene89850.t1 AT5G26310 44.332 494 253 9 5 493 5 481 5.30e-152 442
MS.gene89850.t1 AT4G36770 47.505 461 216 13 7 460 4 445 8.37e-129 382
MS.gene89850.t1 AT2G18570 42.767 477 257 7 7 480 5 468 9.69e-125 372
MS.gene89850.t1 AT4G01070 40.456 482 269 9 3 481 4 470 4.99e-110 335
MS.gene89850.t1 AT1G01420 42.083 480 255 9 7 481 8 469 3.45e-108 330
MS.gene89850.t1 AT1G01420 42.083 480 255 9 7 481 11 472 3.58e-108 330
MS.gene89850.t1 AT1G01390 44.371 453 230 8 7 454 8 443 3.02e-107 328
MS.gene89850.t1 AT1G01390 44.371 453 230 8 7 454 25 460 6.22e-107 327
MS.gene89850.t1 AT2G18560 43.299 388 208 4 95 480 1 378 3.18e-103 314
MS.gene89850.t1 AT4G15280 33.806 494 283 13 5 477 2 472 6.74e-66 220
MS.gene89850.t1 AT4G15280 33.806 494 283 13 5 477 34 504 8.99e-66 221
MS.gene89850.t1 AT3G16520 31.092 476 295 9 9 476 7 457 1.49e-65 219
MS.gene89850.t1 AT3G16520 31.320 447 281 8 9 447 7 435 1.95e-64 216
MS.gene89850.t1 AT3G16520 31.320 447 281 8 9 447 7 435 2.92e-64 215
MS.gene89850.t1 AT3G21750 31.953 507 270 16 5 477 2 467 8.59e-63 212
MS.gene89850.t1 AT3G21790 32.988 482 254 16 5 449 2 451 3.58e-62 211
MS.gene89850.t1 AT3G21760 31.755 507 283 16 5 477 2 479 6.45e-62 210
MS.gene89850.t1 AT1G07250 31.579 494 273 15 4 467 3 461 1.37e-61 209
MS.gene89850.t1 AT4G01070 38.506 348 198 8 3 347 4 338 4.81e-61 204
MS.gene89850.t1 AT3G21800 31.115 511 277 18 4 477 2 474 1.78e-60 206
MS.gene89850.t1 AT2G29740 32.049 493 272 18 4 467 5 463 2.70e-58 200
MS.gene89850.t1 AT3G21780 31.349 504 277 18 5 477 2 467 1.82e-57 198
MS.gene89850.t1 AT2G29750 31.148 488 269 17 4 460 5 456 2.05e-57 198
MS.gene89850.t1 AT2G29710 30.645 496 286 16 4 477 2 461 2.46e-57 197
MS.gene89850.t1 AT1G07260 31.983 469 259 14 9 449 8 444 2.94e-57 197
MS.gene89850.t1 AT1G07240 31.809 503 274 18 9 477 7 474 1.49e-56 196
MS.gene89850.t1 AT2G29730 28.889 495 296 14 4 477 2 461 1.82e-55 192
MS.gene89850.t1 AT4G15260 34.921 378 201 9 120 477 1 353 3.65e-55 189
MS.gene89850.t1 AT2G15490 28.858 499 313 11 1 477 1 479 8.40e-50 177
MS.gene89850.t1 AT2G16890 29.792 480 257 14 7 453 9 441 1.24e-49 177
MS.gene89850.t1 AT2G15490 28.457 499 312 10 1 477 1 476 1.64e-49 177
MS.gene89850.t1 AT2G15480 28.514 498 311 11 2 477 5 479 2.18e-49 176
MS.gene89850.t1 AT5G59580 29.449 472 290 10 5 471 7 440 3.89e-49 175
MS.gene89850.t1 AT2G15480 28.346 508 309 12 2 477 5 489 1.84e-48 174
MS.gene89850.t1 AT5G59590 28.964 473 294 10 4 471 7 442 3.33e-48 172
MS.gene89850.t1 AT3G46690 29.668 482 290 15 4 476 6 447 7.97e-48 171
MS.gene89850.t1 AT4G34131 29.109 505 282 14 4 471 7 472 8.29e-48 172
MS.gene89850.t1 AT5G12890 29.365 504 267 19 9 465 12 473 9.45e-48 172
MS.gene89850.t1 AT1G22400 30.181 497 267 23 3 461 9 463 4.87e-47 170
MS.gene89850.t1 AT1G22360 29.058 499 284 18 2 467 5 466 1.12e-45 166
MS.gene89850.t1 AT2G36970 26.423 492 297 14 3 467 6 459 3.34e-45 165
MS.gene89850.t1 AT3G46680 28.601 479 293 15 2 471 4 442 5.68e-45 164
MS.gene89850.t1 AT2G16890 29.258 458 244 14 7 431 9 419 1.42e-44 162
MS.gene89850.t1 AT1G10400 29.735 491 289 15 1 471 1 455 5.43e-44 161
MS.gene89850.t1 AT1G78270 29.577 497 284 18 3 468 9 470 6.50e-44 162
MS.gene89850.t1 AT2G31790 29.039 489 284 16 3 471 4 449 7.14e-44 161
MS.gene89850.t1 AT5G14860 29.470 509 277 19 2 471 3 468 7.96e-44 161
MS.gene89850.t1 AT2G36770 26.265 514 315 15 1 477 1 487 9.80e-44 161
MS.gene89850.t1 AT5G03490 29.209 493 289 16 3 479 15 463 1.18e-43 160
MS.gene89850.t1 AT1G05680 28.395 486 291 11 2 471 1 445 7.06e-43 158
MS.gene89850.t1 AT2G36760 27.038 503 306 18 7 477 14 487 1.17e-42 158
MS.gene89850.t1 AT1G22340 27.664 488 291 17 3 461 9 463 1.94e-42 157
MS.gene89850.t1 AT2G36800 26.062 518 310 17 1 477 1 486 3.66e-42 157
MS.gene89850.t1 AT1G51210 28.602 465 268 15 3 452 16 431 3.94e-42 155
MS.gene89850.t1 AT3G46700 27.178 482 297 15 4 476 6 442 4.21e-42 156
MS.gene89850.t1 AT4G34135 28.728 456 282 12 4 438 8 441 6.09e-42 156
MS.gene89850.t1 AT1G22380 27.634 503 282 17 4 467 10 469 6.67e-42 156
MS.gene89850.t1 AT3G46660 29.436 479 284 16 5 471 12 448 2.45e-41 154
MS.gene89850.t1 AT3G46720 28.243 478 285 15 3 471 5 433 8.29e-41 152
MS.gene89850.t1 AT2G36780 27.626 514 308 17 1 477 1 487 8.31e-41 153
MS.gene89850.t1 AT1G05675 27.310 487 295 11 2 471 1 445 1.18e-40 152
MS.gene89850.t1 AT3G46670 29.193 483 270 18 9 471 11 441 2.69e-40 151
MS.gene89850.t1 AT5G17050 29.508 366 212 11 116 471 120 449 4.03e-40 150
MS.gene89850.t1 AT1G24100 28.512 477 297 10 5 471 9 451 9.56e-40 149
MS.gene89850.t1 AT1G22360 27.856 499 278 18 2 467 5 454 3.57e-39 148
MS.gene89850.t1 AT2G36750 26.275 510 300 18 7 477 10 482 9.07e-39 147
MS.gene89850.t1 AT3G46650 27.893 484 266 18 5 471 8 425 2.23e-38 145
MS.gene89850.t1 AT3G53160 26.471 510 300 15 7 477 8 481 4.56e-38 145
MS.gene89850.t1 AT4G34138 33.688 282 151 7 211 480 223 480 4.61e-38 145
MS.gene89850.t1 AT2G36790 28.039 510 292 16 7 477 13 486 7.71e-38 145
MS.gene89850.t1 AT2G43840 27.992 493 271 17 1 467 1 435 8.05e-38 144
MS.gene89850.t1 AT2G43840 27.789 493 272 17 1 467 1 435 3.74e-37 142
MS.gene89850.t1 AT1G73880 28.372 430 255 15 5 415 12 407 3.97e-37 142
MS.gene89850.t1 AT3G11340 33.094 278 156 6 197 471 187 437 8.53e-37 141
MS.gene89850.t1 AT5G05880 29.143 350 212 7 128 471 122 441 1.84e-36 140
MS.gene89850.t1 AT1G22370 29.550 511 257 24 4 467 10 464 2.33e-36 140
MS.gene89850.t1 AT4G15490 25.904 498 290 15 3 467 4 455 5.07e-36 139
MS.gene89850.t1 AT5G17030 26.489 487 294 16 3 471 8 448 6.24e-36 139
MS.gene89850.t1 AT2G26480 32.550 298 170 6 178 471 168 438 8.35e-36 139
MS.gene89850.t1 AT2G30140 27.572 486 294 14 3 476 9 448 4.53e-35 136
MS.gene89850.t1 AT2G43820 27.200 500 274 17 1 471 1 439 5.61e-35 136
MS.gene89850.t1 AT5G17040 29.697 330 190 10 150 471 35 330 5.64e-35 134
MS.gene89850.t1 AT2G30140 27.515 487 294 14 3 476 9 449 8.56e-35 135
MS.gene89850.t1 AT5G17040 26.694 487 278 15 6 471 4 432 1.06e-34 135
MS.gene89850.t1 AT5G05870 34.188 234 131 4 241 471 234 447 1.21e-34 135
MS.gene89850.t1 AT1G30530 28.993 407 247 13 75 471 69 443 1.81e-34 135
MS.gene89850.t1 AT3G55700 26.160 474 305 13 9 474 10 446 7.11e-34 133
MS.gene89850.t1 AT4G15550 27.601 471 279 16 7 449 13 449 9.92e-34 133
MS.gene89850.t1 AT2G28080 31.541 279 157 8 195 469 213 461 1.04e-33 133
MS.gene89850.t1 AT2G31750 25.662 491 292 18 5 471 6 447 2.25e-33 132
MS.gene89850.t1 AT2G30150 27.459 488 288 17 7 477 13 451 4.73e-33 131
MS.gene89850.t1 AT1G22370 34.317 271 136 9 211 468 54 295 5.76e-33 127
MS.gene89850.t1 AT2G31750 25.662 491 292 18 5 471 6 447 5.80e-33 131
MS.gene89850.t1 AT3G21560 25.605 496 306 18 7 476 12 470 7.99e-33 131
MS.gene89850.t1 AT3G53150 26.488 521 307 19 3 477 18 508 1.03e-32 130
MS.gene89850.t1 AT5G38010 25.205 488 307 13 4 476 7 451 1.64e-32 129
MS.gene89850.t1 AT2G30150 27.443 481 283 17 14 477 4 435 3.34e-32 128
MS.gene89850.t1 AT4G15480 25.259 483 313 13 7 471 19 471 4.07e-32 129
MS.gene89850.t1 AT5G38040 30.769 299 171 8 178 471 175 442 1.13e-31 127
MS.gene89850.t1 AT1G05560 26.042 480 312 16 7 477 5 450 2.11e-31 126
MS.gene89850.t1 AT5G49690 30.868 311 152 9 187 471 168 441 3.98e-31 125
MS.gene89850.t1 AT1G05560 26.042 480 312 16 7 477 55 500 4.62e-31 126
MS.gene89850.t1 AT5G65550 26.327 490 275 16 5 459 7 445 4.95e-31 125
MS.gene89850.t1 AT3G55710 32.593 270 150 7 211 474 207 450 2.45e-30 123
MS.gene89850.t1 AT4G15500 22.634 486 328 11 1 471 3 455 3.74e-30 123
MS.gene89850.t1 AT5G05890 25.507 345 233 4 127 471 125 445 4.46e-30 122
MS.gene89850.t1 AT5G05860 34.167 240 134 5 239 475 226 444 5.45e-30 122
MS.gene89850.t1 AT2G23260 25.911 494 286 16 4 471 7 446 5.53e-30 122
MS.gene89850.t1 AT1G06000 25.000 496 288 19 3 480 6 435 8.52e-29 118
MS.gene89850.t1 AT4G14090 25.845 503 274 16 4 471 10 448 1.16e-28 118
MS.gene89850.t1 AT5G05900 31.579 266 139 6 212 471 212 440 2.27e-28 117
MS.gene89850.t1 AT2G23250 30.824 279 152 8 209 477 187 434 7.73e-28 115
MS.gene89850.t1 AT1G05530 25.820 488 304 17 7 476 5 452 1.89e-27 115
MS.gene89850.t1 AT4G27570 29.832 238 143 3 201 438 192 405 2.95e-26 111
MS.gene89850.t1 AT4G27560 28.740 254 157 3 201 454 192 421 6.53e-26 110
MS.gene89850.t1 AT3G02100 31.481 270 125 9 195 449 211 435 1.51e-25 109
MS.gene89850.t1 AT1G64910 31.250 256 147 6 206 456 191 422 1.54e-25 109
MS.gene89850.t1 AT5G54010 30.350 257 153 5 183 438 174 405 1.57e-25 109
MS.gene89850.t1 AT2G22590 25.840 476 285 15 5 454 13 446 2.08e-24 106
MS.gene89850.t1 AT5G53990 28.462 260 162 4 197 456 182 417 4.84e-24 105
MS.gene89850.t1 AT3G29630 25.255 491 312 13 2 483 1 445 7.99e-23 101
MS.gene89850.t1 AT1G50580 24.473 474 283 13 2 456 1 418 2.34e-22 100
MS.gene89850.t1 AT5G37950 27.915 283 167 8 115 390 85 337 3.02e-21 95.5
MS.gene89850.t1 AT2G22930 25.483 259 169 3 197 455 182 416 3.58e-21 96.3
MS.gene89850.t1 AT1G64920 26.740 273 172 5 193 461 178 426 1.11e-20 95.1
MS.gene89850.t1 AT4G09500 25.869 259 168 3 197 455 182 416 1.14e-20 94.7
MS.gene89850.t1 AT5G37950 28.082 292 161 10 115 390 85 343 1.28e-20 93.6
MS.gene89850.t1 AT3G29630 29.004 231 147 3 253 483 206 419 1.35e-20 94.4
MS.gene89850.t1 AT4G09500 29.670 182 112 2 274 455 226 391 6.02e-19 89.4
MS.gene89850.t1 AT3G22250 28.922 204 114 6 259 458 268 444 9.23e-19 89.4
MS.gene89850.t1 AT5G54060 29.577 213 130 5 241 452 243 436 3.64e-18 87.4
MS.gene89850.t1 AT2G16890 25.982 331 185 12 7 305 9 311 5.02e-15 76.3
MS.gene89850.t1 AT2G16890 25.982 331 185 12 7 305 9 311 5.02e-15 76.3
MS.gene89850.t1 AT4G34135 24.923 325 221 9 4 311 8 326 7.71e-13 70.1

Find 147 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACCGCTTTCGATTCT+TGG 0.115382 5.3:+11202597 MS.gene89850:CDS
ATTAACCGTTGATGGGATTT+TGG 0.180078 5.3:+11202713 MS.gene89850:CDS
CTAATTCAATGGTGGGAATT+AGG 0.215918 5.3:-11202149 None:intergenic
CGGAGGGTGGTGTTGTTTGT+AGG 0.242750 5.3:+11203354 MS.gene89850:CDS
TGAGTCAGCAGCGGTTTATT+TGG 0.267362 5.3:+11202997 MS.gene89850:CDS
AATCCTAAGGATGGATTGTT+TGG 0.293527 5.3:-11202339 None:intergenic
AGTTAAAGTTAAGGAGTATA+AGG 0.296600 5.3:+11203436 MS.gene89850:CDS
AGATGGTTACGTCGAAATTA+TGG 0.302812 5.3:-11202191 None:intergenic
TGCGGATGCATTGTCCTCTA+TGG 0.309520 5.3:-11203033 None:intergenic
CTAATTCCCACCATTGAATT+AGG 0.314775 5.3:+11202150 MS.gene89850:CDS
TGAAACATTTGTTGCACCTT+GGG 0.317017 5.3:+11202650 MS.gene89850:CDS
GTTCTTGTCGTGGACCTCTT+TGG 0.348996 5.3:+11202438 MS.gene89850:CDS
GAGTCAGCAGCGGTTTATTT+GGG 0.352412 5.3:+11202998 MS.gene89850:CDS
TCGGTCATATATTTGTCATT+TGG 0.365839 5.3:+11202918 MS.gene89850:CDS
CAAAGGCGGTTATTGAAAAC+GGG 0.375550 5.3:+11202769 MS.gene89850:CDS
GGTGAACACGTGGCAAGATC+TGG 0.384639 5.3:+11202734 MS.gene89850:CDS
AGGGAAATATTAACCGTTGA+TGG 0.384981 5.3:+11202705 MS.gene89850:CDS
GAGAAAGCTTCGTCTGTGTT+TGG 0.391515 5.3:+11203467 MS.gene89850:CDS
TTCGATTCTTGGTTGTGAAC+CGG 0.393108 5.3:+11202608 MS.gene89850:CDS
GAGGGAGTTGGCTTACGGTT+TGG 0.394280 5.3:+11202971 MS.gene89850:CDS
TTGTGAACCGGTTCGGTTTG+AGG 0.405899 5.3:+11202620 MS.gene89850:CDS
TGACCGACTCAGTCGGTTGC+CGG 0.408715 5.3:-11202902 None:intergenic
AACAAATGGAGGATTCTTCA+TGG 0.427467 5.3:-11202418 None:intergenic
GTGTTGGAAAGTATTCTTAA+CGG 0.433106 5.3:+11203230 MS.gene89850:CDS
ACAAAGGCGGTTATTGAAAA+CGG 0.437707 5.3:+11202768 MS.gene89850:CDS
GTTAAGGAGTATAAGGTAAG+TGG 0.440214 5.3:+11203443 MS.gene89850:CDS
TTCTTGGTTGTGAACCGGTT+CGG 0.442022 5.3:+11202613 MS.gene89850:CDS
CTCAGCTTGTGGGGCCCACA+TGG 0.449094 5.3:-11203153 None:intergenic
ACCACCCTTCTCCGGTTCAT+CGG 0.451762 5.3:-11202847 None:intergenic
ATCCTAAGGATGGATTGTTT+GGG 0.456888 5.3:-11202338 None:intergenic
GGAGGGTGGTGTTGTTTGTA+GGG 0.459669 5.3:+11203355 MS.gene89850:CDS
CAGATGAGGGAGTTGGCTTA+CGG 0.459875 5.3:+11202966 MS.gene89850:CDS
TTGAAACATTTGTTGCACCT+TGG 0.462520 5.3:+11202649 MS.gene89850:CDS
AAGACGTTTGCCTAATTCAA+TGG 0.473005 5.3:-11202160 None:intergenic
GGAGCTTGGTGTGGCGGTGA+AGG 0.473757 5.3:+11203316 MS.gene89850:CDS
TAAAACAATTTGTAATCCTA+AGG 0.476571 5.3:-11202352 None:intergenic
GGCAACGACAACGGTGGCGG+AGG 0.476716 5.3:+11203337 MS.gene89850:CDS
AGGATCTGAAGCCATAGCTC+GGG 0.477488 5.3:+11203547 MS.gene89850:CDS
ATTGTTTGGGTCAAGTTTGT+CGG 0.477630 5.3:-11202325 None:intergenic
TCTTCTAGCCAGTCCTGGCA+TGG 0.479572 5.3:+11202122 MS.gene89850:CDS
TCACTCTCACCACCCTTCTC+CGG 0.480448 5.3:-11202855 None:intergenic
TTCAACGCTGCGGGTGCAGA+TGG 0.481701 5.3:+11203062 MS.gene89850:CDS
TCCTCCATTTGTTCTTGTCG+TGG 0.487784 5.3:+11202428 MS.gene89850:CDS
GTTCTTACAAGCGGTCCAAT+CGG 0.488609 5.3:-11202825 None:intergenic
AGCTATGAGAGTTAAAGTTA+AGG 0.489146 5.3:+11203427 MS.gene89850:CDS
AGGTCCACGACAAGAACAAA+TGG 0.491196 5.3:-11202432 None:intergenic
GCTTGTAAGAACCGATGAAC+CGG 0.491851 5.3:+11202836 MS.gene89850:CDS
ACGGTGTTTCGATGGTTGCA+TGG 0.492144 5.3:+11203249 MS.gene89850:CDS
AGCGGTCCAATCGGATAAAC+CGG 0.492163 5.3:-11202816 None:intergenic
ATATTAAAACATCCTTCAAC+GGG 0.492704 5.3:+11203176 MS.gene89850:CDS
ACAATTTGTAATCCTAAGGA+TGG 0.493338 5.3:-11202348 None:intergenic
GTCACAAAACCACCCGTTGA+AGG 0.497281 5.3:-11203188 None:intergenic
TGCTTAAGCACCCCGAGCTA+TGG 0.497303 5.3:-11203558 None:intergenic
AAAGGACCGGTTTATCCGAT+TGG 0.497535 5.3:+11202810 MS.gene89850:CDS
ATAACCGCCTTTGTAGCTGT+TGG 0.501877 5.3:-11202759 None:intergenic
GAGCTATGGCTTCAGATCCT+TGG 0.502468 5.3:-11203544 None:intergenic
AAGATTTGTGATCGAATGAA+AGG 0.507347 5.3:-11202393 None:intergenic
GACCCAAACAATCCATCCTT+AGG 0.507362 5.3:+11202336 MS.gene89850:CDS
GCAGTTCTTCTAGCCAGTCC+TGG 0.507678 5.3:+11202117 MS.gene89850:CDS
ATATATTTGTCATTTGGAAG+TGG 0.509609 5.3:+11202924 MS.gene89850:CDS
TATTTGTCATTTGGAAGTGG+TGG 0.510421 5.3:+11202927 MS.gene89850:CDS
TCATGAATCTCTATGTAAGA+TGG 0.512143 5.3:+11203496 MS.gene89850:CDS
GGAATTAGGTGTCCCATGCC+AGG 0.512529 5.3:-11202135 None:intergenic
AGGGCTTTGTGTTCCCATGT+GGG 0.512578 5.3:+11203139 MS.gene89850:CDS
TAGGTGTCCCATGCCAGGAC+TGG 0.514601 5.3:-11202130 None:intergenic
AAGGTGCAACAAATGTTTCA+AGG 0.516516 5.3:-11202647 None:intergenic
TATTCTTAACGGTGTTTCGA+TGG 0.522424 5.3:+11203241 MS.gene89850:CDS
GGGAAATATTAACCGTTGAT+GGG 0.526221 5.3:+11202706 MS.gene89850:CDS
AGGGTATCCTCAAACCGAAC+CGG 0.526804 5.3:-11202627 None:intergenic
TGAATAGGACAAAAGAGGTA+GGG 0.527801 5.3:+11203120 MS.gene89850:CDS
CATGTGCAACTCACGTGCCA+TGG 0.528933 5.3:-11202475 None:intergenic
AAGAACCGATGAACCGGAGA+AGG 0.529512 5.3:+11202842 MS.gene89850:CDS
AGGAAAGTTTGCGAAAGGAC+CGG 0.530190 5.3:+11202797 MS.gene89850:CDS
TTGAATAGGACAAAAGAGGT+AGG 0.532740 5.3:+11203119 MS.gene89850:CDS
GGTGGTGCGGCCGCCCATAG+AGG 0.537784 5.3:+11203019 MS.gene89850:CDS
TAGGGCTTTGTGTTCCCATG+TGG 0.539065 5.3:+11203138 MS.gene89850:CDS
ATTTGTCATTTGGAAGTGGT+GGG 0.540559 5.3:+11202928 MS.gene89850:CDS
TCAGCAGCGGTTTATTTGGG+TGG 0.541389 5.3:+11203001 MS.gene89850:CDS
CTATGGCTTCAGATCCTTGG+TGG 0.543460 5.3:-11203541 None:intergenic
GATATTAAAACATCCTTCAA+CGG 0.545113 5.3:+11203175 MS.gene89850:CDS
GCGGATGCATTGTCCTCTAT+GGG 0.545375 5.3:-11203032 None:intergenic
AAGGATCTGAAGCCATAGCT+CGG 0.545745 5.3:+11203546 MS.gene89850:CDS
CTTCATCTGTGATGAAAGGA+AGG 0.555836 5.3:-11202551 None:intergenic
GCAACGACAACGGTGGCGGA+GGG 0.556375 5.3:+11203338 MS.gene89850:CDS
CCTCATCTGACCTTCCGACA+TGG 0.556711 5.3:-11202952 None:intergenic
AACAGCAGTGAACCAAGCAT+TGG 0.558371 5.3:-11202520 None:intergenic
GCGGTTCATGATTCTTAGCA+TGG 0.558955 5.3:-11202584 None:intergenic
GAAGGCAACGACAACGGTGG+CGG 0.559539 5.3:+11203334 MS.gene89850:CDS
ACGACAACGGTGGCGGAGGG+TGG 0.561139 5.3:+11203341 MS.gene89850:CDS
CGTTTGCCTAATTCAATGGT+GGG 0.562353 5.3:-11202156 None:intergenic
ATCTTCTGCTCTGCATAAAG+CGG 0.565650 5.3:-11203272 None:intergenic
CTTCTAGCCAGTCCTGGCAT+GGG 0.570142 5.3:+11202123 MS.gene89850:CDS
AAAGCTTCATCTGTGATGAA+AGG 0.573302 5.3:-11202555 None:intergenic
TGTGGTGGATTACTTGCCGA+AGG 0.574866 5.3:+11203091 MS.gene89850:CDS
AGTTTGTCGGAGACATCGAC+AGG 0.575889 5.3:-11202312 None:intergenic
TGGTGGATTACTTGCCGAAG+GGG 0.578338 5.3:+11203093 MS.gene89850:CDS
TCAGCTTGTGGGGCCCACAT+GGG 0.580375 5.3:-11203152 None:intergenic
GGAGGTGATTAGAAGAGTGA+TGG 0.582198 5.3:+11203388 MS.gene89850:CDS
TCTGGAGCCAACAGCTACAA+AGG 0.582741 5.3:+11202752 MS.gene89850:CDS
ATGTGCAACTCACGTGCCAT+GGG 0.583729 5.3:-11202474 None:intergenic
GGAAGGTCAGATGAGGGAGT+TGG 0.585259 5.3:+11202959 MS.gene89850:CDS
GTGGTGGATTACTTGCCGAA+GGG 0.587612 5.3:+11203092 MS.gene89850:CDS
ACGTTTGCCTAATTCAATGG+TGG 0.587817 5.3:-11202157 None:intergenic
GAAAGGAAGAGATTCAATCA+TGG 0.593916 5.3:-11202376 None:intergenic
GGCGGTTGTGACGACGAAGA+TGG 0.594399 5.3:-11202208 None:intergenic
AGGTGCAACAAATGTTTCAA+GGG 0.594651 5.3:-11202646 None:intergenic
AGCAGAGGAGCTTGGTGTGG+CGG 0.599179 5.3:+11203310 MS.gene89850:CDS
AGAGTGATGGTTGATGAAGA+AGG 0.601665 5.3:+11203401 MS.gene89850:CDS
GGTTCATCGGTTCTTACAAG+CGG 0.601897 5.3:-11202834 None:intergenic
TGTGTCTGAATCTGAGGCGG+CGG 0.602103 5.3:-11202226 None:intergenic
CTGTGGTTGGAATTCTGTGT+TGG 0.602736 5.3:+11203214 MS.gene89850:CDS
AAAGTTACGTTGAAGTCACA+AGG 0.605910 5.3:+11202685 MS.gene89850:CDS
CCATGTCGGAAGGTCAGATG+AGG 0.606511 5.3:+11202952 MS.gene89850:CDS
AGCGGTTTATTTGGGTGGTG+CGG 0.610105 5.3:+11203006 MS.gene89850:CDS
GAAACATTTGTTGCACCTTG+GGG 0.615035 5.3:+11202651 MS.gene89850:CDS
ACTATGTTAGCAGAGGAGCT+TGG 0.616073 5.3:+11203302 MS.gene89850:CDS
TTAAAACATCCTTCAACGGG+TGG 0.618820 5.3:+11203179 MS.gene89850:CDS
AGTGGTGGGACCATGTCGGA+AGG 0.619154 5.3:+11202942 MS.gene89850:CDS
TACGTCGAAATTATGGTGAG+TGG 0.620641 5.3:-11202184 None:intergenic
GGCGGTGAAGGCAACGACAA+CGG 0.626813 5.3:+11203328 MS.gene89850:CDS
TATTGTGTCTGAATCTGAGG+CGG 0.632930 5.3:-11202229 None:intergenic
AGAACCGATGAACCGGAGAA+GGG 0.634363 5.3:+11202843 MS.gene89850:CDS
GAGGTGTTACAATGATGTCA+AGG 0.638467 5.3:-11202290 None:intergenic
GTTAGCAGAGGAGCTTGGTG+TGG 0.639672 5.3:+11203307 MS.gene89850:CDS
TTGTAGGGAAAAGATAGCGG+AGG 0.640226 5.3:+11203370 MS.gene89850:CDS
TGACCGGCAACCGACTGAGT+CGG 0.643980 5.3:+11202899 MS.gene89850:CDS
GAATGCTACTATGTTAGCAG+AGG 0.645266 5.3:+11203295 MS.gene89850:CDS
TGTTTGTAGGGAAAAGATAG+CGG 0.645616 5.3:+11203367 MS.gene89850:CDS
GGATCTGAAGCCATAGCTCG+GGG 0.650517 5.3:+11203548 MS.gene89850:CDS
AAATATATGACCGACTCAGT+CGG 0.651900 5.3:-11202909 None:intergenic
TGGAAGTGGTGGGACCATGT+CGG 0.656190 5.3:+11202938 MS.gene89850:CDS
ACCGATGAACCGGAGAAGGG+TGG 0.656519 5.3:+11202846 MS.gene89850:CDS
GAAAAGCTGCAGTACCAAAG+AGG 0.662878 5.3:-11202452 None:intergenic
GTTTGGAGCTGAGTCAGCAG+CGG 0.664346 5.3:+11202988 MS.gene89850:CDS
GATGCATTGTCCTCTATGGG+CGG 0.664975 5.3:-11203029 None:intergenic
TGCAGATGGAACGACTGTGG+TGG 0.667210 5.3:+11203076 MS.gene89850:CDS
GTTCACCAAAATCCCATCAA+CGG 0.668646 5.3:-11202718 None:intergenic
AAAGGCGGTTATTGAAAACG+GGG 0.676104 5.3:+11202770 MS.gene89850:CDS
TCCACGACAAGAACAAATGG+AGG 0.678092 5.3:-11202429 None:intergenic
CATGTCGGAAGGTCAGATGA+GGG 0.685191 5.3:+11202953 MS.gene89850:CDS
TTGTCGGAGACATCGACAGG+AGG 0.693714 5.3:-11202309 None:intergenic
AAGTTACGTTGAAGTCACAA+GGG 0.708644 5.3:+11202686 MS.gene89850:CDS
GGGTGCAGATGGAACGACTG+TGG 0.712393 5.3:+11203073 MS.gene89850:CDS
TGTGAACTTCATCTCCACCA+AGG 0.714563 5.3:+11203527 MS.gene89850:CDS
GGTGAAGGCAACGACAACGG+TGG 0.716471 5.3:+11203331 MS.gene89850:CDS
GGAGCCAACAGCTACAAAGG+CGG 0.723854 5.3:+11202755 MS.gene89850:CDS
TCACAACCAAGAATCGAAAG+CGG 0.733034 5.3:-11202603 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAACAATTTGTAATCCTA+AGG - chr5.3:11202355-11202374 None:intergenic 20.0%
!!! GTGAAAATTTAATTTTGAGT+TGG + chr5.3:11202874-11202893 MS.gene89850:CDS 20.0%
! ATATTAAAACATCCTTCAAC+GGG + chr5.3:11203176-11203195 MS.gene89850:CDS 25.0%
! GATATTAAAACATCCTTCAA+CGG + chr5.3:11203175-11203194 MS.gene89850:CDS 25.0%
!! AGTTAAAGTTAAGGAGTATA+AGG + chr5.3:11203436-11203455 MS.gene89850:CDS 25.0%
!! ATATATTTGTCATTTGGAAG+TGG + chr5.3:11202924-11202943 MS.gene89850:CDS 25.0%
!! TCAACGTAACTTTTATGAAT+AGG - chr5.3:11202678-11202697 None:intergenic 25.0%
AAGATTTGTGATCGAATGAA+AGG - chr5.3:11202396-11202415 None:intergenic 30.0%
ACAATTTGTAATCCTAAGGA+TGG - chr5.3:11202351-11202370 None:intergenic 30.0%
AGCTATGAGAGTTAAAGTTA+AGG + chr5.3:11203427-11203446 MS.gene89850:CDS 30.0%
TCATGAATCTCTATGTAAGA+TGG + chr5.3:11203496-11203515 MS.gene89850:CDS 30.0%
TCGGTCATATATTTGTCATT+TGG + chr5.3:11202918-11202937 MS.gene89850:CDS 30.0%
! GTTTTTGAATAGGACAAAAG+AGG + chr5.3:11203115-11203134 MS.gene89850:CDS 30.0%
! TTTTAATATCTCAGCTTGTG+GGG - chr5.3:11203165-11203184 None:intergenic 30.0%
! TTTTATTGTGTCTGAATCTG+AGG - chr5.3:11202235-11202254 None:intergenic 30.0%
!! GTGTTGGAAAGTATTCTTAA+CGG + chr5.3:11203230-11203249 MS.gene89850:CDS 30.0%
!! GTTTTAATATCTCAGCTTGT+GGG - chr5.3:11203166-11203185 None:intergenic 30.0%
!!! AAGAACTGCATGAGTTTTTT+GGG - chr5.3:11202106-11202125 None:intergenic 30.0%
!!! TGTTTTAATATCTCAGCTTG+TGG - chr5.3:11203167-11203186 None:intergenic 30.0%
AAAGCTTCATCTGTGATGAA+AGG - chr5.3:11202558-11202577 None:intergenic 35.0%
AAAGTTACGTTGAAGTCACA+AGG + chr5.3:11202685-11202704 MS.gene89850:CDS 35.0%
AACAAATGGAGGATTCTTCA+TGG - chr5.3:11202421-11202440 None:intergenic 35.0%
AAGACGTTTGCCTAATTCAA+TGG - chr5.3:11202163-11202182 None:intergenic 35.0%
AAGGTGCAACAAATGTTTCA+AGG - chr5.3:11202650-11202669 None:intergenic 35.0%
AAGTTACGTTGAAGTCACAA+GGG + chr5.3:11202686-11202705 MS.gene89850:CDS 35.0%
ACAAAGGCGGTTATTGAAAA+CGG + chr5.3:11202768-11202787 MS.gene89850:CDS 35.0%
AGATGGTTACGTCGAAATTA+TGG - chr5.3:11202194-11202213 None:intergenic 35.0%
AGGGAAATATTAACCGTTGA+TGG + chr5.3:11202705-11202724 MS.gene89850:CDS 35.0%
AGGTGCAACAAATGTTTCAA+GGG - chr5.3:11202649-11202668 None:intergenic 35.0%
ATTGTTTGGGTCAAGTTTGT+CGG - chr5.3:11202328-11202347 None:intergenic 35.0%
CTAATTCCCACCATTGAATT+AGG + chr5.3:11202150-11202169 MS.gene89850:CDS 35.0%
GAAAGGAAGAGATTCAATCA+TGG - chr5.3:11202379-11202398 None:intergenic 35.0%
GGGAAATATTAACCGTTGAT+GGG + chr5.3:11202706-11202725 MS.gene89850:CDS 35.0%
TATTCTTAACGGTGTTTCGA+TGG + chr5.3:11203241-11203260 MS.gene89850:CDS 35.0%
TGAATAGGACAAAAGAGGTA+GGG + chr5.3:11203120-11203139 MS.gene89850:CDS 35.0%
TGTTTGTAGGGAAAAGATAG+CGG + chr5.3:11203367-11203386 MS.gene89850:CDS 35.0%
TTGAATAGGACAAAAGAGGT+AGG + chr5.3:11203119-11203138 MS.gene89850:CDS 35.0%
! AAATATATGACCGACTCAGT+CGG - chr5.3:11202912-11202931 None:intergenic 35.0%
! ATTTGTCATTTGGAAGTGGT+GGG + chr5.3:11202928-11202947 MS.gene89850:CDS 35.0%
! CTAATTCAATGGTGGGAATT+AGG - chr5.3:11202152-11202171 None:intergenic 35.0%
! GTTAAGGAGTATAAGGTAAG+TGG + chr5.3:11203443-11203462 MS.gene89850:CDS 35.0%
! GTTATTGAAAACGGGGTTTT+AGG + chr5.3:11202777-11202796 MS.gene89850:CDS 35.0%
! TATTTGTCATTTGGAAGTGG+TGG + chr5.3:11202927-11202946 MS.gene89850:CDS 35.0%
! TGAAACATTTGTTGCACCTT+GGG + chr5.3:11202650-11202669 MS.gene89850:CDS 35.0%
! TTGAAACATTTGTTGCACCT+TGG + chr5.3:11202649-11202668 MS.gene89850:CDS 35.0%
! TTTTCTTTGCAACCAATGCT+TGG + chr5.3:11202508-11202527 MS.gene89850:CDS 35.0%
!! AATCCTAAGGATGGATTGTT+TGG - chr5.3:11202342-11202361 None:intergenic 35.0%
!! ATCCTAAGGATGGATTGTTT+GGG - chr5.3:11202341-11202360 None:intergenic 35.0%
!! ATTAACCGTTGATGGGATTT+TGG + chr5.3:11202713-11202732 MS.gene89850:CDS 35.0%
!!! GAAGAACTGCATGAGTTTTT+TGG - chr5.3:11202107-11202126 None:intergenic 35.0%
!!! GTTTTAGGAAAGTTTGCGAA+AGG + chr5.3:11202792-11202811 MS.gene89850:CDS 35.0%
!!! TAATTTTGAGTTGGCTTGAC+CGG + chr5.3:11202883-11202902 MS.gene89850:CDS 35.0%
AAAGGCGGTTATTGAAAACG+GGG + chr5.3:11202770-11202789 MS.gene89850:CDS 40.0%
ACGTTTGCCTAATTCAATGG+TGG - chr5.3:11202160-11202179 None:intergenic 40.0%
ATCTTCTGCTCTGCATAAAG+CGG - chr5.3:11203275-11203294 None:intergenic 40.0%
CAAAGGCGGTTATTGAAAAC+GGG + chr5.3:11202769-11202788 MS.gene89850:CDS 40.0%
CGTTTGCCTAATTCAATGGT+GGG - chr5.3:11202159-11202178 None:intergenic 40.0%
CTTCATCTGTGATGAAAGGA+AGG - chr5.3:11202554-11202573 None:intergenic 40.0%
GAATGCTACTATGTTAGCAG+AGG + chr5.3:11203295-11203314 MS.gene89850:CDS 40.0%
GTCCTATTCAAAAACCCCTT+CGG - chr5.3:11203110-11203129 None:intergenic 40.0%
GTTCACCAAAATCCCATCAA+CGG - chr5.3:11202721-11202740 None:intergenic 40.0%
TACGTCGAAATTATGGTGAG+TGG - chr5.3:11202187-11202206 None:intergenic 40.0%
TATTGTGTCTGAATCTGAGG+CGG - chr5.3:11202232-11202251 None:intergenic 40.0%
TCACAACCAAGAATCGAAAG+CGG - chr5.3:11202606-11202625 None:intergenic 40.0%
TTAAAACATCCTTCAACGGG+TGG + chr5.3:11203179-11203198 MS.gene89850:CDS 40.0%
TTCGATTCTTGGTTGTGAAC+CGG + chr5.3:11202608-11202627 MS.gene89850:CDS 40.0%
! CTTTTATGAATAGGTCCCCA+AGG - chr5.3:11202669-11202688 None:intergenic 40.0%
! GAAACATTTGTTGCACCTTG+GGG + chr5.3:11202651-11202670 MS.gene89850:CDS 40.0%
! GAGGTGTTACAATGATGTCA+AGG - chr5.3:11202293-11202312 None:intergenic 40.0%
!! AGAGTGATGGTTGATGAAGA+AGG + chr5.3:11203401-11203420 MS.gene89850:CDS 40.0%
AACAGCAGTGAACCAAGCAT+TGG - chr5.3:11202523-11202542 None:intergenic 45.0%
ACTATGTTAGCAGAGGAGCT+TGG + chr5.3:11203302-11203321 MS.gene89850:CDS 45.0%
AGGAAAGTTTGCGAAAGGAC+CGG + chr5.3:11202797-11202816 MS.gene89850:CDS 45.0%
AGGTCCACGACAAGAACAAA+TGG - chr5.3:11202435-11202454 None:intergenic 45.0%
ATAACCGCCTTTGTAGCTGT+TGG - chr5.3:11202762-11202781 None:intergenic 45.0%
CATGAACCGCTTTCGATTCT+TGG + chr5.3:11202597-11202616 MS.gene89850:CDS 45.0%
CTGTGGTTGGAATTCTGTGT+TGG + chr5.3:11203214-11203233 MS.gene89850:CDS 45.0%
GAAAAGCTGCAGTACCAAAG+AGG - chr5.3:11202455-11202474 None:intergenic 45.0%
GACCCAAACAATCCATCCTT+AGG + chr5.3:11202336-11202355 MS.gene89850:CDS 45.0%
GAGAAAGCTTCGTCTGTGTT+TGG + chr5.3:11203467-11203486 MS.gene89850:CDS 45.0%
GAGTCAGCAGCGGTTTATTT+GGG + chr5.3:11202998-11203017 MS.gene89850:CDS 45.0%
GCGGTTCATGATTCTTAGCA+TGG - chr5.3:11202587-11202606 None:intergenic 45.0%
GCTTGTAAGAACCGATGAAC+CGG + chr5.3:11202836-11202855 MS.gene89850:CDS 45.0%
GGAGGTGATTAGAAGAGTGA+TGG + chr5.3:11203388-11203407 MS.gene89850:CDS 45.0%
GTTCTTACAAGCGGTCCAAT+CGG - chr5.3:11202828-11202847 None:intergenic 45.0%
TCCACGACAAGAACAAATGG+AGG - chr5.3:11202432-11202451 None:intergenic 45.0%
TCCTCCATTTGTTCTTGTCG+TGG + chr5.3:11202428-11202447 MS.gene89850:CDS 45.0%
TGAGTCAGCAGCGGTTTATT+TGG + chr5.3:11202997-11203016 MS.gene89850:CDS 45.0%
TGTGAACTTCATCTCCACCA+AGG + chr5.3:11203527-11203546 MS.gene89850:CDS 45.0%
TTCTTGGTTGTGAACCGGTT+CGG + chr5.3:11202613-11202632 MS.gene89850:CDS 45.0%
! AAAGGACCGGTTTATCCGAT+TGG + chr5.3:11202810-11202829 MS.gene89850:CDS 45.0%
! AAGGATCTGAAGCCATAGCT+CGG + chr5.3:11203546-11203565 MS.gene89850:CDS 45.0%
! GTTTTGTGACACACTGTGGT+TGG + chr5.3:11203201-11203220 MS.gene89850:CDS 45.0%
! TGCCGAAGGGGTTTTTGAAT+AGG + chr5.3:11203105-11203124 MS.gene89850:CDS 45.0%
! TTGTAGGGAAAAGATAGCGG+AGG + chr5.3:11203370-11203389 MS.gene89850:CDS 45.0%
!! ATGGGATTTTGGTGAACACG+TGG + chr5.3:11202724-11202743 MS.gene89850:CDS 45.0%
!! GGTTCATCGGTTCTTACAAG+CGG - chr5.3:11202837-11202856 None:intergenic 45.0%
AAGAACCGATGAACCGGAGA+AGG + chr5.3:11202842-11202861 MS.gene89850:CDS 50.0%
ACGGTGTTTCGATGGTTGCA+TGG + chr5.3:11203249-11203268 MS.gene89850:CDS 50.0%
AGAACCGATGAACCGGAGAA+GGG + chr5.3:11202843-11202862 MS.gene89850:CDS 50.0%
AGCGGTCCAATCGGATAAAC+CGG - chr5.3:11202819-11202838 None:intergenic 50.0%
AGCGGTTTATTTGGGTGGTG+CGG + chr5.3:11203006-11203025 MS.gene89850:CDS 50.0%
AGTTTGTCGGAGACATCGAC+AGG - chr5.3:11202315-11202334 None:intergenic 50.0%
ATGTGCAACTCACGTGCCAT+GGG - chr5.3:11202477-11202496 None:intergenic 50.0%
CATGTCGGAAGGTCAGATGA+GGG + chr5.3:11202953-11202972 MS.gene89850:CDS 50.0%
CTATGGCTTCAGATCCTTGG+TGG - chr5.3:11203544-11203563 None:intergenic 50.0%
GAGCTATGGCTTCAGATCCT+TGG - chr5.3:11203547-11203566 None:intergenic 50.0%
GATGCATTGTCCTCTATGGG+CGG - chr5.3:11203032-11203051 None:intergenic 50.0%
GCGGATGCATTGTCCTCTAT+GGG - chr5.3:11203035-11203054 None:intergenic 50.0%
GTCACAAAACCACCCGTTGA+AGG - chr5.3:11203191-11203210 None:intergenic 50.0%
GTTCTTGTCGTGGACCTCTT+TGG + chr5.3:11202438-11202457 MS.gene89850:CDS 50.0%
TCAGCAGCGGTTTATTTGGG+TGG + chr5.3:11203001-11203020 MS.gene89850:CDS 50.0%
TGCGGATGCATTGTCCTCTA+TGG - chr5.3:11203036-11203055 None:intergenic 50.0%
! AGGATCTGAAGCCATAGCTC+GGG + chr5.3:11203547-11203566 MS.gene89850:CDS 50.0%
! AGGGCTTTGTGTTCCCATGT+GGG + chr5.3:11203139-11203158 MS.gene89850:CDS 50.0%
! AGGGTATCCTCAAACCGAAC+CGG - chr5.3:11202630-11202649 None:intergenic 50.0%
! CAGATGAGGGAGTTGGCTTA+CGG + chr5.3:11202966-11202985 MS.gene89850:CDS 50.0%
! CGCAGCGTTGAAAAACGATG+CGG - chr5.3:11203054-11203073 None:intergenic 50.0%
! TAGGGCTTTGTGTTCCCATG+TGG + chr5.3:11203138-11203157 MS.gene89850:CDS 50.0%
! TCTGGAGCCAACAGCTACAA+AGG + chr5.3:11202752-11202771 MS.gene89850:CDS 50.0%
! TGGTACTGCAGCTTTTCCCA+TGG + chr5.3:11202458-11202477 MS.gene89850:CDS 50.0%
!! CGCATCGTTTTTCAACGCTG+CGG + chr5.3:11203052-11203071 MS.gene89850:CDS 50.0%
!! GCATCGTTTTTCAACGCTGC+GGG + chr5.3:11203053-11203072 MS.gene89850:CDS 50.0%
!! GGAGGGTGGTGTTGTTTGTA+GGG + chr5.3:11203355-11203374 MS.gene89850:CDS 50.0%
!! GTGGTGGATTACTTGCCGAA+GGG + chr5.3:11203092-11203111 MS.gene89850:CDS 50.0%
!! TGGTGGATTACTTGCCGAAG+GGG + chr5.3:11203093-11203112 MS.gene89850:CDS 50.0%
!! TGTGGTGGATTACTTGCCGA+AGG + chr5.3:11203091-11203110 MS.gene89850:CDS 50.0%
!! TTGTGAACCGGTTCGGTTTG+AGG + chr5.3:11202620-11202639 MS.gene89850:CDS 50.0%
!!! GGTGGTTTTGTGACACACTG+TGG + chr5.3:11203197-11203216 MS.gene89850:CDS 50.0%
ACCACCCTTCTCCGGTTCAT+CGG - chr5.3:11202850-11202869 None:intergenic 55.0%
CATGTGCAACTCACGTGCCA+TGG - chr5.3:11202478-11202497 None:intergenic 55.0%
CCATGTCGGAAGGTCAGATG+AGG + chr5.3:11202952-11202971 MS.gene89850:CDS 55.0%
CCTCATCTGACCTTCCGACA+TGG - chr5.3:11202955-11202974 None:intergenic 55.0%
CTTCTAGCCAGTCCTGGCAT+GGG + chr5.3:11202123-11202142 MS.gene89850:CDS 55.0%
GCAGTTCTTCTAGCCAGTCC+TGG + chr5.3:11202117-11202136 MS.gene89850:CDS 55.0%
GGAAGGTCAGATGAGGGAGT+TGG + chr5.3:11202959-11202978 MS.gene89850:CDS 55.0%
GGAATTAGGTGTCCCATGCC+AGG - chr5.3:11202138-11202157 None:intergenic 55.0%
GGAGCCAACAGCTACAAAGG+CGG + chr5.3:11202755-11202774 MS.gene89850:CDS 55.0%
GGTGAACACGTGGCAAGATC+TGG + chr5.3:11202734-11202753 MS.gene89850:CDS 55.0%
TCACTCTCACCACCCTTCTC+CGG - chr5.3:11202858-11202877 None:intergenic 55.0%
TCTTCTAGCCAGTCCTGGCA+TGG + chr5.3:11202122-11202141 MS.gene89850:CDS 55.0%
TGCAGATGGAACGACTGTGG+TGG + chr5.3:11203076-11203095 MS.gene89850:CDS 55.0%
TTGTCGGAGACATCGACAGG+AGG - chr5.3:11202312-11202331 None:intergenic 55.0%
! GAGGGAGTTGGCTTACGGTT+TGG + chr5.3:11202971-11202990 MS.gene89850:CDS 55.0%
! GGATCTGAAGCCATAGCTCG+GGG + chr5.3:11203548-11203567 MS.gene89850:CDS 55.0%
! GTTAGCAGAGGAGCTTGGTG+TGG + chr5.3:11203307-11203326 MS.gene89850:CDS 55.0%
! GTTTGGAGCTGAGTCAGCAG+CGG + chr5.3:11202988-11203007 MS.gene89850:CDS 55.0%
! TGGAAGTGGTGGGACCATGT+CGG + chr5.3:11202938-11202957 MS.gene89850:CDS 55.0%
! TGTGTCTGAATCTGAGGCGG+CGG - chr5.3:11202229-11202248 None:intergenic 55.0%
!! CGGAGGGTGGTGTTGTTTGT+AGG + chr5.3:11203354-11203373 MS.gene89850:CDS 55.0%
ACCGATGAACCGGAGAAGGG+TGG + chr5.3:11202846-11202865 MS.gene89850:CDS 60.0%
GAAGGCAACGACAACGGTGG+CGG + chr5.3:11203334-11203353 MS.gene89850:CDS 60.0%
GGCGGTGAAGGCAACGACAA+CGG + chr5.3:11203328-11203347 MS.gene89850:CDS 60.0%
GGCGGTTGTGACGACGAAGA+TGG - chr5.3:11202211-11202230 None:intergenic 60.0%
GGGTGCAGATGGAACGACTG+TGG + chr5.3:11203073-11203092 MS.gene89850:CDS 60.0%
GGTGAAGGCAACGACAACGG+TGG + chr5.3:11203331-11203350 MS.gene89850:CDS 60.0%
TAGGTGTCCCATGCCAGGAC+TGG - chr5.3:11202133-11202152 None:intergenic 60.0%
TCAGCTTGTGGGGCCCACAT+GGG - chr5.3:11203155-11203174 None:intergenic 60.0%
TGACCGGCAACCGACTGAGT+CGG + chr5.3:11202899-11202918 MS.gene89850:CDS 60.0%
TTCAACGCTGCGGGTGCAGA+TGG + chr5.3:11203062-11203081 MS.gene89850:CDS 60.0%
! AGTGGTGGGACCATGTCGGA+AGG + chr5.3:11202942-11202961 MS.gene89850:CDS 60.0%
! TGACCGACTCAGTCGGTTGC+CGG - chr5.3:11202905-11202924 None:intergenic 60.0%
!! AGCAGAGGAGCTTGGTGTGG+CGG + chr5.3:11203310-11203329 MS.gene89850:CDS 60.0%
CTCAGCTTGTGGGGCCCACA+TGG - chr5.3:11203156-11203175 None:intergenic 65.0%
!! GCAACGACAACGGTGGCGGA+GGG + chr5.3:11203338-11203357 MS.gene89850:CDS 65.0%
!! GGAGCTTGGTGTGGCGGTGA+AGG + chr5.3:11203316-11203335 MS.gene89850:CDS 65.0%
! GGCAACGACAACGGTGGCGG+AGG + chr5.3:11203337-11203356 MS.gene89850:CDS 70.0%
!! ACGACAACGGTGGCGGAGGG+TGG + chr5.3:11203341-11203360 MS.gene89850:CDS 70.0%
GGTGGTGCGGCCGCCCATAG+AGG + chr5.3:11203019-11203038 MS.gene89850:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 11202096 11203577 11202096 ID=MS.gene89850
chr5.3 mRNA 11202096 11203577 11202096 ID=MS.gene89850.t1;Parent=MS.gene89850
chr5.3 exon 11202096 11203577 11202096 ID=MS.gene89850.t1.exon1;Parent=MS.gene89850.t1
chr5.3 CDS 11202096 11203577 11202096 ID=cds.MS.gene89850.t1;Parent=MS.gene89850.t1
Gene Sequence

>MS.gene89850

ATGGTGTCCCAAAAAACTCATGCAGTTCTTCTAGCCAGTCCTGGCATGGGACACCTAATTCCCACCATTGAATTAGGCAAACGTCTTACCACTCACCATAATTTCGACGTAACCATCTTCGTCGTCACAACCGCCGCCTCAGATTCAGACACAATAAAATCACATATACTTCAACAAGTATCAAACTCTAATAGCCTTGACATCATTGTAACACCTCCTGTCGATGTCTCCGACAAACTTGACCCAAACAATCCATCCTTAGGATTACAAATTGTTTTAACCATGATTGAATCTCTTCCTTTCATTCGATCACAAATCTTATCCATGAAGAATCCTCCATTTGTTCTTGTCGTGGACCTCTTTGGTACTGCAGCTTTTCCCATGGCACGTGAGTTGCACATGTCTAGTTACGTTTTCTTTGCAACCAATGCTTGGTTCACTGCTGTTAACTTATACCTTCCTTTCATCACAGATGAAGCTTTTTCACGCCATGCTAAGAATCATGAACCGCTTTCGATTCTTGGTTGTGAACCGGTTCGGTTTGAGGATACCCTTGAAACATTTGTTGCACCTTGGGGACCTATTCATAAAAGTTACGTTGAAGTCACAAGGGAAATATTAACCGTTGATGGGATTTTGGTGAACACGTGGCAAGATCTGGAGCCAACAGCTACAAAGGCGGTTATTGAAAACGGGGTTTTAGGAAAGTTTGCGAAAGGACCGGTTTATCCGATTGGACCGCTTGTAAGAACCGATGAACCGGAGAAGGGTGGTGAGAGTGAAAATTTAATTTTGAGTTGGCTTGACCGGCAACCGACTGAGTCGGTCATATATTTGTCATTTGGAAGTGGTGGGACCATGTCGGAAGGTCAGATGAGGGAGTTGGCTTACGGTTTGGAGCTGAGTCAGCAGCGGTTTATTTGGGTGGTGCGGCCGCCCATAGAGGACAATGCATCCGCATCGTTTTTCAACGCTGCGGGTGCAGATGGAACGACTGTGGTGGATTACTTGCCGAAGGGGTTTTTGAATAGGACAAAAGAGGTAGGGCTTTGTGTTCCCATGTGGGCCCCACAAGCTGAGATATTAAAACATCCTTCAACGGGTGGTTTTGTGACACACTGTGGTTGGAATTCTGTGTTGGAAAGTATTCTTAACGGTGTTTCGATGGTTGCATGGCCGCTTTATGCAGAGCAGAAGATGAATGCTACTATGTTAGCAGAGGAGCTTGGTGTGGCGGTGAAGGCAACGACAACGGTGGCGGAGGGTGGTGTTGTTTGTAGGGAAAAGATAGCGGAGGTGATTAGAAGAGTGATGGTTGATGAAGAAGGTGTAGCTATGAGAGTTAAAGTTAAGGAGTATAAGGTAAGTGGAGAGAAAGCTTCGTCTGTGTTTGGTTCTTCTCATGAATCTCTATGTAAGATGGCAAAAGATTGTGAACTTCATCTCCACCAAGGATCTGAAGCCATAGCTCGGGGTGCTTAA
Protein sequence

>MS.gene89850.t1

MVSQKTHAVLLASPGMGHLIPTIELGKRLTTHHNFDVTIFVVTTAASDSDTIKSHILQQVSNSNSLDIIVTPPVDVSDKLDPNNPSLGLQIVLTMIESLPFIRSQILSMKNPPFVLVVDLFGTAAFPMARELHMSSYVFFATNAWFTAVNLYLPFITDEAFSRHAKNHEPLSILGCEPVRFEDTLETFVAPWGPIHKSYVEVTREILTVDGILVNTWQDLEPTATKAVIENGVLGKFAKGPVYPIGPLVRTDEPEKGGESENLILSWLDRQPTESVIYLSFGSGGTMSEGQMRELAYGLELSQQRFIWVVRPPIEDNASASFFNAAGADGTTVVDYLPKGFLNRTKEVGLCVPMWAPQAEILKHPSTGGFVTHCGWNSVLESILNGVSMVAWPLYAEQKMNATMLAEELGVAVKATTTVAEGGVVCREKIAEVIRRVMVDEEGVAMRVKVKEYKVSGEKASSVFGSSHESLCKMAKDCELHLHQGSEAIARGA