AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59335

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59335.t1 MTR_5g019580 90.467 493 47 0 1 493 1 493 0.0 935
MS.gene59335.t1 MTR_5g019580 85.193 493 45 1 1 493 53 517 0.0 863
MS.gene59335.t1 MTR_8g074550 46.201 487 239 12 6 476 7 486 1.60e-137 406
MS.gene59335.t1 MTR_0078s0010 41.322 484 261 13 2 479 1 467 1.98e-108 330
MS.gene59335.t1 MTR_7g117170 40.254 472 261 10 9 475 17 472 6.59e-106 324
MS.gene59335.t1 MTR_8g027885 39.872 469 259 11 10 475 21 469 5.74e-105 322
MS.gene59335.t1 MTR_7g047030 39.419 482 273 11 2 479 1 467 7.25e-104 318
MS.gene59335.t1 MTR_7g047270 39.419 482 273 11 2 479 1 467 7.25e-104 318
MS.gene59335.t1 MTR_8g027870 38.889 468 265 9 10 475 21 469 1.12e-103 318
MS.gene59335.t1 MTR_0078s0060 39.876 484 269 13 2 480 1 467 7.37e-102 313
MS.gene59335.t1 MTR_8g009055 38.285 478 276 12 2 475 1 463 2.84e-101 312
MS.gene59335.t1 MTR_0184s0040 39.293 481 274 11 2 479 16 481 2.89e-100 310
MS.gene59335.t1 MTR_0078s0190 39.293 481 274 11 2 479 16 481 2.89e-100 310
MS.gene59335.t1 MTR_8g008990 37.917 480 277 12 2 475 1 465 2.88e-99 307
MS.gene59335.t1 MTR_8g006710 36.570 484 275 13 2 475 1 462 3.85e-99 306
MS.gene59335.t1 MTR_8g006730 36.983 484 274 13 2 475 1 463 8.89e-99 305
MS.gene59335.t1 MTR_6g023665 36.214 486 285 12 2 481 8 474 3.99e-97 301
MS.gene59335.t1 MTR_8g009073 36.117 479 283 11 2 475 1 461 5.56e-96 298
MS.gene59335.t1 MTR_8g009050 37.526 477 281 10 2 475 1 463 1.94e-95 297
MS.gene59335.t1 MTR_6g488280 35.908 479 284 11 2 475 1 461 2.64e-95 296
MS.gene59335.t1 MTR_0428s0010 35.908 479 284 11 2 475 1 461 2.64e-95 296
MS.gene59335.t1 MTR_8g006270 38.116 467 269 14 4 467 3 452 1.49e-93 292
MS.gene59335.t1 MTR_1g019510 34.979 486 296 10 2 484 1 469 3.67e-91 286
MS.gene59335.t1 MTR_7g046490 35.565 478 284 14 2 474 1 459 1.92e-87 276
MS.gene59335.t1 MTR_8g009067 35.244 471 286 9 7 474 6 460 2.07e-87 276
MS.gene59335.t1 MTR_0184s0030 34.362 486 293 11 2 479 1 468 6.76e-87 275
MS.gene59335.t1 MTR_8g006260 34.656 479 289 12 5 475 4 466 1.06e-86 275
MS.gene59335.t1 MTR_8g009063 34.591 477 295 8 1 474 7 469 1.24e-86 275
MS.gene59335.t1 MTR_8g012635 34.025 482 296 10 2 475 1 468 2.87e-86 273
MS.gene59335.t1 MTR_6g005600 35.146 478 294 8 5 479 4 468 1.17e-84 269
MS.gene59335.t1 MTR_8g465670 34.280 493 278 16 1 474 1 466 2.27e-84 268
MS.gene59335.t1 MTR_8g077590 34.937 478 281 14 6 475 8 463 3.23e-84 268
MS.gene59335.t1 MTR_8g012650 33.820 479 293 11 2 471 1 464 1.36e-83 266
MS.gene59335.t1 MTR_8g012745 34.884 473 285 10 2 467 1 457 1.40e-82 264
MS.gene59335.t1 MTR_8g008970 35.000 480 287 11 2 475 1 461 7.31e-82 270
MS.gene59335.t1 MTR_8g008970 36.201 279 153 4 196 474 531 784 4.70e-45 169
MS.gene59335.t1 MTR_6g033625 33.200 500 267 12 5 476 2 462 1.12e-78 253
MS.gene59335.t1 MTR_8g009073 38.372 344 198 6 134 475 1 332 6.67e-78 247
MS.gene59335.t1 MTR_8g006220 34.096 481 263 17 2 455 1 454 8.13e-77 249
MS.gene59335.t1 MTR_3g009510 33.737 495 298 11 4 483 2 481 1.25e-76 248
MS.gene59335.t1 MTR_8g012630 34.958 472 233 12 2 467 1 404 1.95e-75 243
MS.gene59335.t1 MTR_6g033725 34.534 472 277 11 5 467 2 450 1.37e-74 243
MS.gene59335.t1 MTR_8g009067 36.571 350 212 4 125 474 3 342 2.51e-74 238
MS.gene59335.t1 MTR_6g033615 33.471 484 273 11 5 476 2 448 1.46e-70 232
MS.gene59335.t1 MTR_6g033660 34.755 469 274 10 9 467 6 452 4.13e-70 231
MS.gene59335.t1 MTR_6g033675 32.347 473 289 9 5 467 2 453 3.53e-67 224
MS.gene59335.t1 MTR_5g090630 31.828 487 289 14 4 474 2 461 7.98e-66 220
MS.gene59335.t1 MTR_8g012730 36.893 309 167 3 147 454 3 284 1.59e-65 214
MS.gene59335.t1 MTR_5g098930 31.056 483 288 15 4 468 2 457 7.31e-65 217
MS.gene59335.t1 MTR_5g090700 32.238 487 286 17 4 468 2 466 1.28e-63 214
MS.gene59335.t1 MTR_2g040530 31.440 493 286 16 5 477 3 463 1.86e-62 211
MS.gene59335.t1 MTR_5g090670 31.992 497 286 17 4 474 2 472 5.61e-61 207
MS.gene59335.t1 MTR_5g090580 31.056 483 293 16 4 467 2 463 1.28e-60 206
MS.gene59335.t1 MTR_5g090610 29.545 484 299 12 4 474 2 456 2.51e-60 205
MS.gene59335.t1 MTR_5g070090 30.832 493 286 18 2 477 6 460 1.07e-59 203
MS.gene59335.t1 MTR_2g046820 31.064 470 262 13 5 449 3 435 1.17e-59 203
MS.gene59335.t1 MTR_5g090660 30.159 504 303 17 4 486 2 477 2.78e-59 205
MS.gene59335.t1 MTR_5g090620 30.629 493 297 16 4 474 2 471 1.21e-58 201
MS.gene59335.t1 MTR_1g019520 45.000 220 116 2 265 484 4 218 3.13e-58 192
MS.gene59335.t1 MTR_5g090600 31.185 481 274 16 4 467 2 442 3.51e-57 197
MS.gene59335.t1 MTR_2g046750 30.346 491 295 16 5 477 3 464 2.13e-56 195
MS.gene59335.t1 MTR_5g070040 31.027 477 260 18 2 449 6 442 5.57e-56 194
MS.gene59335.t1 MTR_5g087620 31.731 520 271 17 4 477 7 488 1.67e-53 188
MS.gene59335.t1 MTR_4g485630 30.495 505 284 22 3 477 5 472 6.69e-48 172
MS.gene59335.t1 MTR_2g098430 29.388 490 268 18 2 455 1 448 1.07e-45 166
MS.gene59335.t1 MTR_0009s0240 29.938 481 257 20 1 450 1 432 4.48e-45 164
MS.gene59335.t1 MTR_4g082820 29.577 497 293 17 1 476 1 461 7.28e-44 161
MS.gene59335.t1 MTR_8g066610 28.876 516 296 15 3 484 5 483 3.22e-43 160
MS.gene59335.t1 MTR_8g090095 37.500 240 137 5 210 447 220 448 5.71e-43 159
MS.gene59335.t1 MTR_6g014250 26.130 509 308 14 1 477 4 476 1.00e-42 158
MS.gene59335.t1 MTR_7g070660 34.752 282 153 7 211 479 217 480 1.70e-42 158
MS.gene59335.t1 MTR_5g464760 28.486 502 279 19 4 467 9 468 2.35e-42 157
MS.gene59335.t1 MTR_4g094220 27.843 510 290 18 1 471 1 471 3.16e-42 157
MS.gene59335.t1 MTR_5g045960 28.711 512 296 18 3 477 5 484 3.61e-42 157
MS.gene59335.t1 MTR_4g008630 39.437 213 119 4 242 454 236 438 6.85e-42 155
MS.gene59335.t1 MTR_1g029540 37.559 213 124 3 242 454 232 435 7.88e-42 155
MS.gene59335.t1 MTR_4g064987 28.425 489 289 19 1 476 1 441 8.92e-42 155
MS.gene59335.t1 MTR_7g070800 26.839 503 296 19 7 474 6 471 1.28e-41 155
MS.gene59335.t1 MTR_7g102490 28.932 515 298 20 1 477 1 485 1.61e-41 155
MS.gene59335.t1 MTR_4g031800 28.287 502 278 18 17 483 19 473 3.29e-41 154
MS.gene59335.t1 MTR_3g009490 40.212 189 105 3 291 476 3 186 4.52e-41 146
MS.gene59335.t1 MTR_8g466240 28.600 500 277 14 5 477 6 452 5.38e-41 153
MS.gene59335.t1 MTR_8g064870 26.531 490 309 14 9 477 13 472 5.95e-41 153
MS.gene59335.t1 MTR_6g038300 27.475 495 290 14 7 480 11 457 6.74e-41 152
MS.gene59335.t1 MTR_7g070810 37.662 231 117 4 261 479 261 476 6.90e-41 153
MS.gene59335.t1 MTR_8g009840 43.005 193 106 2 282 474 333 521 1.10e-40 154
MS.gene59335.t1 MTR_4g485640 27.888 502 291 18 8 478 210 671 1.52e-40 155
MS.gene59335.t1 MTR_6g014220 25.941 505 314 14 1 477 4 476 1.75e-40 152
MS.gene59335.t1 MTR_6g038240 28.175 504 282 17 3 480 7 456 1.75e-40 152
MS.gene59335.t1 MTR_1g107350 26.316 494 312 15 7 478 8 471 2.38e-40 152
MS.gene59335.t1 MTR_7g070860 26.523 509 288 17 1 474 1 458 3.03e-40 151
MS.gene59335.t1 MTR_7g011470 26.587 504 302 15 1 480 4 463 6.35e-40 150
MS.gene59335.t1 MTR_7g011470 27.038 503 299 16 1 477 4 464 6.78e-40 150
MS.gene59335.t1 MTR_4g064987 28.024 496 288 20 1 476 1 447 8.26e-40 149
MS.gene59335.t1 MTR_6g014290 25.049 511 311 14 1 477 4 476 1.14e-39 150
MS.gene59335.t1 MTR_3g069710 35.439 285 145 8 195 471 190 443 1.19e-39 149
MS.gene59335.t1 MTR_6g014170 27.327 505 305 17 1 484 4 467 1.20e-39 149
MS.gene59335.t1 MTR_3g008010 26.538 520 298 19 5 485 8 482 2.51e-39 149
MS.gene59335.t1 MTR_6g013990 33.673 294 156 8 197 480 215 479 3.06e-39 149
MS.gene59335.t1 MTR_0891s0010 30.717 293 172 8 200 486 27 294 3.09e-39 144
MS.gene59335.t1 MTR_4g024020 27.096 513 301 15 5 477 7 486 3.41e-39 149
MS.gene59335.t1 MTR_8g059425 25.933 509 317 14 4 484 7 483 3.97e-39 148
MS.gene59335.t1 MTR_7g070940 34.672 274 149 6 211 474 215 468 5.01e-39 148
MS.gene59335.t1 MTR_3g479520 27.344 512 296 19 2 477 10 481 7.96e-39 147
MS.gene59335.t1 MTR_5g464810 28.402 507 287 19 6 477 11 476 1.26e-38 147
MS.gene59335.t1 MTR_5g064240 28.402 507 287 19 6 477 11 476 1.26e-38 147
MS.gene59335.t1 MTR_7g055710 28.516 519 280 20 1 471 1 476 1.39e-38 147
MS.gene59335.t1 MTR_1g032490 25.926 486 319 12 7 477 10 469 1.70e-38 146
MS.gene59335.t1 MTR_2g008210 27.148 512 301 19 3 481 7 479 1.76e-38 146
MS.gene59335.t1 MTR_6g038200 27.673 477 259 18 7 454 11 430 2.02e-38 146
MS.gene59335.t1 MTR_5g072830 27.160 486 291 18 7 477 10 447 2.97e-38 145
MS.gene59335.t1 MTR_3g479490 27.984 511 288 22 2 474 1 469 4.43e-38 145
MS.gene59335.t1 MTR_0036s0220 27.579 504 293 19 7 477 12 476 5.41e-38 145
MS.gene59335.t1 MTR_3g049970 26.572 493 307 16 7 477 9 468 5.65e-38 145
MS.gene59335.t1 MTR_4g485590 39.819 221 103 5 201 413 181 379 7.41e-38 143
MS.gene59335.t1 MTR_5g058320 26.347 501 310 15 1 480 4 466 1.02e-37 144
MS.gene59335.t1 MTR_7g012120 33.108 296 162 9 206 479 209 490 1.35e-37 144
MS.gene59335.t1 MTR_7g102550 35.640 289 143 9 207 474 214 480 2.13e-37 144
MS.gene59335.t1 MTR_6g014040 26.796 515 296 20 3 477 6 479 2.91e-37 143
MS.gene59335.t1 MTR_6g014050 32.441 299 159 10 197 484 218 484 3.48e-37 143
MS.gene59335.t1 MTR_4g128720 26.708 483 303 13 4 476 12 453 4.47e-37 142
MS.gene59335.t1 MTR_5g035580 28.337 487 280 17 3 470 9 445 4.64e-37 142
MS.gene59335.t1 MTR_6g038230 29.218 486 256 19 7 463 11 437 4.94e-37 142
MS.gene59335.t1 MTR_7g070930 26.818 440 258 13 3 413 10 414 5.12e-37 142
MS.gene59335.t1 MTR_1g107360 26.543 486 284 16 9 467 11 450 5.49e-37 142
MS.gene59335.t1 MTR_5g035560 26.931 479 297 12 3 470 7 443 5.60e-37 142
MS.gene59335.t1 MTR_8g064880 27.632 456 273 15 9 438 11 435 5.67e-37 142
MS.gene59335.t1 MTR_4g128690 30.376 372 210 12 114 476 119 450 7.16e-37 141
MS.gene59335.t1 MTR_1g107315 25.889 506 314 17 6 484 7 478 7.67e-37 142
MS.gene59335.t1 MTR_7g070740 26.139 505 314 19 5 479 9 484 7.79e-37 142
MS.gene59335.t1 MTR_4g117890 26.775 493 275 18 17 471 23 467 8.03e-37 142
MS.gene59335.t1 MTR_8g083290 28.600 500 276 17 7 471 3 456 8.21e-37 141
MS.gene59335.t1 MTR_7g071040 26.265 514 297 16 3 474 13 486 9.34e-37 142
MS.gene59335.t1 MTR_7g070780 26.550 516 300 18 1 474 1 479 1.09e-36 142
MS.gene59335.t1 MTR_6g038220 27.835 485 263 17 7 463 11 436 1.51e-36 140
MS.gene59335.t1 MTR_6g014020 26.550 516 313 17 1 485 4 484 1.72e-36 141
MS.gene59335.t1 MTR_1g062380 26.565 527 281 16 7 477 16 492 2.11e-36 141
MS.gene59335.t1 MTR_7g013240 25.591 465 283 15 7 457 6 421 2.65e-36 140
MS.gene59335.t1 MTR_8g071070 27.835 485 286 17 1 457 1 449 2.68e-36 140
MS.gene59335.t1 MTR_7g470610 36.752 234 113 5 211 431 74 285 3.28e-36 136
MS.gene59335.t1 MTR_7g070583 36.752 234 113 5 211 431 74 285 3.28e-36 136
MS.gene59335.t1 MTR_4g108250 26.276 529 281 17 3 474 7 483 4.33e-36 140
MS.gene59335.t1 MTR_4g117960 25.941 505 298 22 10 477 14 479 5.04e-36 140
MS.gene59335.t1 MTR_0536s0020 26.190 504 282 20 17 480 28 481 8.38e-36 139
MS.gene59335.t1 MTR_4g082810 37.321 209 114 5 200 405 201 395 1.29e-35 137
MS.gene59335.t1 MTR_0078s0200 29.321 324 208 8 2 317 1 311 1.36e-35 135
MS.gene59335.t1 MTR_7g102460 27.626 514 304 20 1 477 1 483 1.37e-35 139
MS.gene59335.t1 MTR_6g013450 26.706 513 301 19 5 480 8 482 1.38e-35 138
MS.gene59335.t1 MTR_1g107285 25.100 498 303 15 9 479 10 464 1.51e-35 138
MS.gene59335.t1 MTR_3g079480 27.397 511 295 21 3 477 17 487 1.83e-35 138
MS.gene59335.t1 MTR_3g479610 30.357 280 153 8 211 477 61 311 1.86e-35 134
MS.gene59335.t1 MTR_4g094920 32.567 261 152 5 241 492 246 491 1.91e-35 138
MS.gene59335.t1 MTR_6g014270 27.048 525 301 21 1 484 1 484 1.93e-35 138
MS.gene59335.t1 MTR_7g013260 25.217 460 290 14 7 456 6 421 1.94e-35 137
MS.gene59335.t1 MTR_6g013920 30.284 317 180 7 173 477 190 477 2.02e-35 138
MS.gene59335.t1 MTR_6g014200 28.295 516 290 23 1 477 1 475 2.08e-35 138
MS.gene59335.t1 MTR_2g034990 27.877 391 235 13 110 477 114 480 2.46e-35 138
MS.gene59335.t1 MTR_4g095008 25.971 489 299 15 9 474 12 460 3.26e-35 138
MS.gene59335.t1 MTR_7g117405 28.400 500 297 19 7 477 12 479 3.32e-35 137
MS.gene59335.t1 MTR_1g107375 25.755 497 291 15 7 477 8 452 3.46e-35 137
MS.gene59335.t1 MTR_6g013900 30.284 317 180 9 173 477 190 477 3.88e-35 137
MS.gene59335.t1 MTR_7g070610 33.333 282 152 9 211 474 219 482 5.69e-35 137
MS.gene59335.t1 MTR_5g016660 37.339 233 122 5 255 478 266 483 6.69e-35 137
MS.gene59335.t1 MTR_6g013960 25.941 505 310 17 4 477 7 478 7.22e-35 136
MS.gene59335.t1 MTR_7g013200 25.272 459 283 16 7 452 5 416 7.52e-35 135
MS.gene59335.t1 MTR_5g027210 32.806 253 147 3 205 442 206 450 8.02e-35 136
MS.gene59335.t1 MTR_5g045970 32.517 286 155 8 211 477 225 491 1.29e-34 136
MS.gene59335.t1 MTR_6g035265 27.160 405 235 13 107 483 106 478 1.34e-34 135
MS.gene59335.t1 MTR_5g072840 26.240 484 298 16 7 477 10 447 1.40e-34 135
MS.gene59335.t1 MTR_6g014240 26.419 511 290 20 1 485 1 451 1.63e-34 135
MS.gene59335.t1 MTR_4g118000 29.825 285 164 9 211 477 199 465 1.69e-34 135
MS.gene59335.t1 MTR_0288s0020 25.294 510 294 19 1 477 4 459 2.07e-34 135
MS.gene59335.t1 MTR_7g013220 25.745 470 278 18 7 452 5 427 2.11e-34 134
MS.gene59335.t1 MTR_6g035185 25.871 402 238 12 110 481 114 485 2.22e-34 135
MS.gene59335.t1 MTR_4g117950 29.442 394 210 16 110 474 104 458 2.60e-34 135
MS.gene59335.t1 MTR_2g035040 30.124 322 175 11 181 471 74 376 2.89e-34 133
MS.gene59335.t1 MTR_3g479470 26.901 513 294 18 3 477 9 478 3.83e-34 134
MS.gene59335.t1 MTR_1g107365 24.547 497 302 15 7 479 45 492 4.61e-34 134
MS.gene59335.t1 MTR_6g013440 26.667 510 308 20 3 480 7 482 5.03e-34 134
MS.gene59335.t1 MTR_5g072810 24.486 486 307 12 7 477 12 452 5.68e-34 133
MS.gene59335.t1 MTR_6g078320 27.721 487 297 18 6 466 10 467 6.19e-34 134
MS.gene59335.t1 MTR_1g107380 25.904 498 313 15 2 477 8 471 7.21e-34 134
MS.gene59335.t1 MTR_7g070910 24.558 509 308 18 5 474 9 480 9.96e-34 133
MS.gene59335.t1 MTR_6g014310 29.874 318 180 10 173 477 192 479 1.18e-33 133
MS.gene59335.t1 MTR_7g013180 27.049 488 293 18 7 477 5 446 1.21e-33 132
MS.gene59335.t1 MTR_6g014190 33.333 213 120 3 265 477 95 285 1.43e-33 129
MS.gene59335.t1 MTR_8g007585 34.742 213 117 4 265 477 200 390 1.73e-33 131
MS.gene59335.t1 MTR_7g067120 34.413 247 123 9 224 459 193 411 2.01e-33 131
MS.gene59335.t1 MTR_4g485620 30.986 284 164 5 195 468 183 444 3.04e-33 131
MS.gene59335.t1 MTR_6g014150 32.743 226 130 4 259 484 279 482 3.84e-33 131
MS.gene59335.t1 MTR_0477s0010 34.742 213 117 5 265 477 125 315 4.08e-33 128
MS.gene59335.t1 MTR_8g083280 31.970 269 151 5 212 477 221 460 5.15e-33 131
MS.gene59335.t1 MTR_6g011340 33.333 213 120 4 265 477 288 478 5.26e-33 131
MS.gene59335.t1 MTR_7g067330 34.052 232 121 7 233 459 207 411 5.52e-33 130
MS.gene59335.t1 MTR_5g072820 26.955 486 292 19 7 477 10 447 5.58e-33 130
MS.gene59335.t1 MTR_7g071050 25.417 480 267 15 3 459 9 420 8.39e-33 130
MS.gene59335.t1 MTR_2g059240 27.293 447 249 17 7 423 13 413 1.28e-32 130
MS.gene59335.t1 MTR_6g014187 25.146 513 320 15 4 485 7 486 1.55e-32 130
MS.gene59335.t1 MTR_2g008226 27.917 480 267 19 7 452 10 444 1.86e-32 129
MS.gene59335.t1 MTR_5g031830 29.925 401 211 17 100 471 104 463 1.97e-32 129
MS.gene59335.t1 MTR_7g080900 26.113 494 285 17 3 470 8 447 2.61e-32 129
MS.gene59335.t1 MTR_7g102450 27.976 504 286 19 7 477 11 470 3.44e-32 129
MS.gene59335.t1 MTR_6g035295 25.838 507 297 20 18 484 23 490 4.65e-32 129
MS.gene59335.t1 MTR_8g044140 35.938 256 134 10 242 481 210 451 5.16e-32 128
MS.gene59335.t1 MTR_4g117980 31.469 286 169 9 207 477 207 480 5.40e-32 128
MS.gene59335.t1 MTR_0536s0010 25.859 495 277 21 17 474 31 472 6.96e-32 128
MS.gene59335.t1 MTR_5g031840 33.203 256 125 10 200 442 204 426 8.10e-32 127
MS.gene59335.t1 MTR_8g006230 33.831 201 126 3 116 315 55 249 8.80e-32 124
MS.gene59335.t1 MTR_3g084540 26.087 506 310 17 2 477 1 472 8.84e-32 127
MS.gene59335.t1 MTR_8g088560 26.987 478 291 16 7 467 10 446 9.41e-32 127
MS.gene59335.t1 MTR_7g102560 31.488 289 156 8 211 477 214 482 1.04e-31 127
MS.gene59335.t1 MTR_7g070870 33.818 275 145 9 185 445 196 447 1.28e-31 127
MS.gene59335.t1 MTR_6g042310 27.536 483 268 15 7 462 18 445 1.55e-31 127
MS.gene59335.t1 MTR_2g035020 32.400 250 143 7 242 474 237 477 1.56e-31 127
MS.gene59335.t1 MTR_8g043470 31.364 220 129 3 265 484 186 383 2.17e-31 125
MS.gene59335.t1 MTR_2086s0010 32.500 200 111 5 287 486 1 176 2.59e-31 119
MS.gene59335.t1 MTR_1996s0010 32.500 200 111 5 287 486 1 176 2.59e-31 119
MS.gene59335.t1 MTR_5g031860 26.061 495 292 18 7 471 12 462 2.80e-31 126
MS.gene59335.t1 MTR_5g072860 25.709 494 283 15 7 470 18 457 3.61e-31 125
MS.gene59335.t1 MTR_5g066410 36.245 229 116 7 236 452 205 415 3.62e-31 125
MS.gene59335.t1 MTR_7g102520 36.444 225 117 5 264 477 278 487 4.13e-31 126
MS.gene59335.t1 MTR_5g029800 33.469 245 136 8 250 479 252 484 4.80e-31 125
MS.gene59335.t1 MTR_7g080940 25.000 496 290 17 1 470 5 444 6.88e-31 125
MS.gene59335.t1 MTR_8g068360 27.255 499 245 20 7 454 12 443 7.00e-31 125
MS.gene59335.t1 MTR_4g123553 26.509 464 270 13 7 447 15 430 8.78e-31 124
MS.gene59335.t1 MTR_3g069690 27.049 488 254 18 3 454 4 425 1.28e-30 124
MS.gene59335.t1 MTR_5g040030 35.745 235 128 6 259 484 273 493 1.62e-30 124
MS.gene59335.t1 MTR_5g075440 23.944 497 300 16 7 477 10 454 1.94e-30 123
MS.gene59335.t1 MTR_1g040310 33.858 254 136 8 244 481 249 486 2.10e-30 124
MS.gene59335.t1 MTR_3g084530 26.285 506 308 16 2 477 1 471 2.99e-30 123
MS.gene59335.t1 MTR_8g032950 32.895 228 134 5 260 477 261 479 3.41e-30 123
MS.gene59335.t1 MTR_8g068340 36.866 217 115 5 242 454 246 444 3.50e-30 123
MS.gene59335.t1 MTR_7g039550 33.468 248 136 6 240 474 26 257 4.17e-30 119
MS.gene59335.t1 MTR_8g007565 26.489 487 275 18 1 452 1 439 4.73e-30 122
MS.gene59335.t1 MTR_5g016480 24.609 512 301 18 4 477 5 469 5.42e-30 122
MS.gene59335.t1 MTR_5g090690 44.828 145 72 4 242 383 166 305 6.88e-30 120
MS.gene59335.t1 MTR_8g068330 33.080 263 136 6 202 454 208 440 7.60e-30 122
MS.gene59335.t1 MTR_8g007650 26.489 487 275 18 1 452 1 439 7.94e-30 122
MS.gene59335.t1 MTR_7g080935 24.750 501 285 17 1 470 5 444 9.11e-30 122
MS.gene59335.t1 MTR_3g031400 25.157 477 287 14 6 467 17 438 1.07e-29 121
MS.gene59335.t1 MTR_2g008220 33.074 257 142 6 201 452 208 439 1.38e-29 121
MS.gene59335.t1 MTR_2g046620 26.446 484 292 17 7 473 16 452 1.88e-29 120
MS.gene59335.t1 MTR_4g077960 26.739 460 256 14 16 447 1 407 1.92e-29 120
MS.gene59335.t1 MTR_6g014300 25.595 504 305 18 3 480 8 467 2.33e-29 120
MS.gene59335.t1 MTR_7g070760 33.649 211 91 4 211 414 32 200 5.55e-29 114
MS.gene59335.t1 MTR_5g067170 25.261 479 313 11 14 471 18 472 5.66e-29 119
MS.gene59335.t1 MTR_3g031450 24.043 470 303 13 6 467 17 440 1.59e-28 118
MS.gene59335.t1 MTR_5g039900 26.253 499 293 22 18 479 24 484 1.60e-28 118
MS.gene59335.t1 MTR_3g084520 25.049 507 313 18 2 477 1 471 2.80e-28 117
MS.gene59335.t1 MTR_2g008225 34.562 217 118 4 241 452 243 440 3.79e-28 117
MS.gene59335.t1 MTR_6g036650 26.237 465 287 15 7 452 18 445 8.82e-28 116
MS.gene59335.t1 MTR_5g004940 30.870 230 114 6 244 448 182 391 1.13e-27 114
MS.gene59335.t1 MTR_5g090650 26.359 368 210 11 4 360 2 319 3.07e-27 112
MS.gene59335.t1 MTR_7g080950 32.075 212 121 5 259 470 251 439 6.70e-27 113
MS.gene59335.t1 MTR_4g059370 35.326 184 104 3 267 447 190 361 2.39e-26 110
MS.gene59335.t1 MTR_3g435310 34.673 199 107 5 253 447 210 389 3.22e-26 110
MS.gene59335.t1 MTR_4g079250 31.111 225 133 5 259 477 248 456 7.23e-25 107
MS.gene59335.t1 MTR_4g079270 30.901 233 143 5 241 472 236 451 1.72e-24 106
MS.gene59335.t1 MTR_8g056740 29.333 225 126 6 265 487 168 361 6.67e-24 103
MS.gene59335.t1 MTR_1g090270 34.010 197 115 4 246 442 245 426 2.83e-23 102
MS.gene59335.t1 MTR_6g014185 29.630 270 137 11 210 477 125 343 6.61e-23 100
MS.gene59335.t1 MTR_5g098960 33.333 243 123 9 212 444 212 425 3.27e-22 99.8
MS.gene59335.t1 MTR_2g014900 27.935 247 154 4 208 454 208 430 1.86e-21 97.4
MS.gene59335.t1 MTR_6g014000 37.302 126 72 2 343 468 27 145 1.96e-21 97.4
MS.gene59335.t1 MTR_5g066390 35.135 148 87 3 330 477 75 213 2.28e-21 92.8
MS.gene59335.t1 MTR_1g107325 32.867 143 89 2 325 467 206 341 7.64e-21 94.4
MS.gene59335.t1 MTR_0536s0030 35.294 153 87 5 336 477 199 350 8.12e-21 94.4
MS.gene59335.t1 MTR_6g014160 27.778 252 115 9 200 441 202 396 1.78e-19 90.9
MS.gene59335.t1 MTR_7g070995 33.594 128 77 2 355 474 13 140 2.04e-19 85.5
MS.gene59335.t1 MTR_2g083430 30.579 242 148 5 234 473 229 452 1.52e-18 88.6
MS.gene59335.t1 MTR_2g083380 32.273 220 124 5 237 455 255 450 2.36e-18 88.2
MS.gene59335.t1 MTR_2g083420 36.486 148 91 3 332 477 286 432 2.87e-18 87.4
MS.gene59335.t1 MTR_2g083480 31.020 245 141 7 233 473 232 452 4.76e-18 87.0
MS.gene59335.t1 MTR_2g083390 35.135 148 93 3 332 477 286 432 2.23e-17 84.7
MS.gene59335.t1 MTR_1g090280 30.128 156 97 2 287 442 133 276 4.65e-17 82.4
MS.gene59335.t1 MTR_2g083490 32.420 219 123 5 238 455 239 433 1.80e-16 82.0
MS.gene59335.t1 MTR_6g052375 27.778 216 125 4 148 360 7 194 6.06e-15 76.3
MS.gene59335.t1 MTR_6g005660 25.191 262 185 6 5 263 4 257 6.47e-13 69.3
MS.gene59335.t1 MTR_2g086283 31.677 161 73 4 297 455 186 311 8.28e-13 70.1
MS.gene59335.t1 MTR_0184s0010 38.542 96 57 1 386 481 4 97 5.47e-12 62.4
MS.gene59335.t1 MTR_0475s0030 43.636 55 31 0 365 419 11 65 2.71e-11 60.5
MS.gene59335.t1 MTR_6g014186 22.543 519 284 23 1 480 1 440 3.60e-11 65.5
MS.gene59335.t1 MTR_3g009500 26.136 264 178 7 5 258 3 259 6.13e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59335.t1 AT3G50740 46.761 494 247 9 5 493 5 487 7.98e-155 449
MS.gene59335.t1 AT5G66690 44.421 484 250 8 5 484 5 473 1.55e-147 431
MS.gene59335.t1 AT5G26310 43.271 483 253 8 5 482 5 471 1.96e-144 423
MS.gene59335.t1 AT2G18570 42.977 477 256 7 7 480 5 468 3.18e-127 379
MS.gene59335.t1 AT4G36770 46.537 462 219 13 7 460 4 445 2.51e-126 376
MS.gene59335.t1 AT4G01070 40.377 478 253 8 3 477 4 452 1.10e-108 331
MS.gene59335.t1 AT1G01390 43.376 468 247 9 7 471 8 460 2.32e-108 330
MS.gene59335.t1 AT1G01390 43.376 468 247 9 7 471 25 477 3.39e-108 331
MS.gene59335.t1 AT1G01420 43.016 451 238 8 7 454 8 442 9.76e-107 327
MS.gene59335.t1 AT1G01420 43.016 451 238 8 7 454 11 445 1.15e-106 326
MS.gene59335.t1 AT2G18560 43.299 388 208 4 95 480 1 378 6.02e-105 318
MS.gene59335.t1 AT4G15280 32.277 505 281 12 5 490 2 464 1.29e-66 222
MS.gene59335.t1 AT3G16520 31.303 476 294 9 9 476 7 457 1.95e-66 221
MS.gene59335.t1 AT4G15280 32.277 505 281 12 5 490 34 496 2.80e-66 222
MS.gene59335.t1 AT3G16520 31.767 447 279 8 9 447 7 435 8.45e-66 219
MS.gene59335.t1 AT3G16520 31.767 447 279 8 9 447 7 435 8.83e-66 219
MS.gene59335.t1 AT3G21760 31.755 507 283 16 5 477 2 479 8.74e-63 212
MS.gene59335.t1 AT3G21790 32.150 479 262 14 5 449 2 451 1.74e-62 212
MS.gene59335.t1 AT3G21800 31.166 523 271 20 4 482 2 479 1.78e-62 211
MS.gene59335.t1 AT3G21750 31.610 503 277 14 5 477 2 467 9.67e-62 209
MS.gene59335.t1 AT1G07250 31.707 492 275 14 4 467 3 461 2.76e-61 208
MS.gene59335.t1 AT4G01070 37.931 348 200 6 3 347 4 338 6.21e-60 201
MS.gene59335.t1 AT2G29740 31.504 492 276 17 4 467 5 463 1.02e-58 201
MS.gene59335.t1 AT1G07260 32.043 465 264 12 9 449 8 444 3.30e-58 200
MS.gene59335.t1 AT2G29710 31.365 491 279 16 9 477 7 461 2.21e-57 197
MS.gene59335.t1 AT3G21780 31.548 504 276 18 5 477 2 467 2.77e-57 197
MS.gene59335.t1 AT1G07240 32.406 503 271 18 9 477 7 474 8.17e-57 196
MS.gene59335.t1 AT2G29730 28.921 491 301 12 4 477 2 461 2.16e-56 195
MS.gene59335.t1 AT2G29750 29.979 487 276 17 4 460 5 456 1.08e-55 193
MS.gene59335.t1 AT4G15260 34.656 378 202 9 120 477 1 353 2.25e-55 189
MS.gene59335.t1 AT2G15490 29.482 502 306 13 1 477 1 479 2.19e-51 182
MS.gene59335.t1 AT2G15490 28.884 502 306 12 1 477 1 476 4.51e-51 181
MS.gene59335.t1 AT2G15480 29.741 501 301 13 2 477 5 479 4.83e-51 181
MS.gene59335.t1 AT2G16890 30.818 477 256 14 7 453 9 441 1.26e-50 179
MS.gene59335.t1 AT2G15480 30.769 468 273 13 2 444 5 446 1.51e-50 180
MS.gene59335.t1 AT5G59590 30.105 475 286 15 4 471 7 442 1.80e-49 176
MS.gene59335.t1 AT5G59580 29.237 472 291 11 5 471 7 440 2.14e-49 176
MS.gene59335.t1 AT1G78270 29.941 511 270 21 3 471 9 473 4.38e-48 173
MS.gene59335.t1 AT5G12890 30.357 504 262 21 9 465 12 473 1.18e-47 172
MS.gene59335.t1 AT4G34131 29.532 491 261 15 4 452 7 454 4.38e-47 170
MS.gene59335.t1 AT2G31790 29.854 479 285 14 3 467 4 445 5.18e-47 169
MS.gene59335.t1 AT3G46690 29.668 482 290 15 4 476 6 447 7.22e-47 169
MS.gene59335.t1 AT2G16890 30.549 455 242 14 7 431 9 419 2.11e-46 167
MS.gene59335.t1 AT3G46680 28.870 478 293 16 2 471 4 442 1.29e-45 166
MS.gene59335.t1 AT5G14860 30.261 499 263 20 2 460 3 456 2.26e-45 166
MS.gene59335.t1 AT1G22400 30.512 508 272 25 3 471 9 474 7.09e-45 164
MS.gene59335.t1 AT5G03490 30.080 502 273 20 3 479 15 463 8.76e-45 164
MS.gene59335.t1 AT1G22360 28.827 503 288 18 2 471 5 470 1.07e-44 164
MS.gene59335.t1 AT1G05680 28.660 485 289 11 2 470 1 444 7.65e-44 160
MS.gene59335.t1 AT2G36770 26.923 520 304 18 1 477 1 487 1.54e-43 160
MS.gene59335.t1 AT4G34135 29.487 468 263 15 4 438 8 441 3.58e-43 159
MS.gene59335.t1 AT3G46700 28.634 454 268 15 4 447 6 413 5.06e-43 158
MS.gene59335.t1 AT1G51210 28.846 468 263 15 3 452 16 431 5.12e-43 158
MS.gene59335.t1 AT1G05675 27.664 488 290 13 2 470 1 444 1.44e-42 157
MS.gene59335.t1 AT1G24100 29.412 476 292 11 5 470 9 450 2.27e-42 157
MS.gene59335.t1 AT3G46660 28.870 478 288 15 5 471 12 448 2.28e-42 157
MS.gene59335.t1 AT2G36800 26.641 518 307 17 1 477 1 486 2.60e-42 157
MS.gene59335.t1 AT1G22340 27.254 488 293 16 3 461 9 463 2.68e-42 157
MS.gene59335.t1 AT2G36970 26.008 496 302 14 3 471 6 463 3.21e-42 157
MS.gene59335.t1 AT2G36780 28.210 514 305 15 1 477 1 487 3.43e-42 157
MS.gene59335.t1 AT1G10400 28.747 487 299 14 1 471 1 455 3.88e-42 156
MS.gene59335.t1 AT5G17050 26.639 488 293 17 3 471 8 449 6.11e-42 155
MS.gene59335.t1 AT2G36760 26.892 502 308 18 7 477 14 487 6.72e-42 156
MS.gene59335.t1 AT1G22380 27.634 503 290 15 4 471 10 473 3.79e-41 154
MS.gene59335.t1 AT3G53160 27.183 504 304 15 7 477 8 481 4.37e-41 154
MS.gene59335.t1 AT4G34138 36.162 271 133 7 211 467 223 467 1.37e-40 152
MS.gene59335.t1 AT3G46720 28.033 478 286 14 3 471 5 433 3.91e-40 150
MS.gene59335.t1 AT3G46670 29.375 480 273 18 9 471 11 441 4.73e-40 150
MS.gene59335.t1 AT2G43840 28.657 499 260 17 1 467 1 435 1.56e-39 149
MS.gene59335.t1 AT2G36750 27.202 511 294 19 7 477 10 482 4.43e-39 148
MS.gene59335.t1 AT2G43840 28.457 499 261 17 1 467 1 435 8.57e-39 147
MS.gene59335.t1 AT5G05880 27.521 476 300 12 3 471 4 441 1.27e-38 146
MS.gene59335.t1 AT1G22360 27.634 503 282 18 2 471 5 458 1.40e-38 147
MS.gene59335.t1 AT3G46650 28.601 479 269 18 5 471 8 425 2.06e-38 145
MS.gene59335.t1 AT1G30530 28.059 474 287 15 8 471 14 443 2.25e-38 145
MS.gene59335.t1 AT2G30140 28.330 473 291 12 3 468 9 440 2.82e-38 145
MS.gene59335.t1 AT2G30140 28.270 474 291 12 3 468 9 441 5.23e-38 145
MS.gene59335.t1 AT3G53150 28.185 518 282 21 3 467 18 498 7.17e-38 145
MS.gene59335.t1 AT2G36790 27.579 504 302 15 7 477 13 486 8.27e-38 145
MS.gene59335.t1 AT5G17030 26.626 492 287 17 3 471 8 448 8.43e-37 141
MS.gene59335.t1 AT2G30150 28.279 488 284 17 7 477 13 451 1.60e-36 140
MS.gene59335.t1 AT1G22370 29.320 515 261 22 4 471 10 468 2.49e-36 140
MS.gene59335.t1 AT5G17040 27.479 484 278 17 6 471 4 432 1.03e-35 138
MS.gene59335.t1 AT2G26480 35.470 234 129 3 241 471 224 438 1.14e-35 138
MS.gene59335.t1 AT2G30150 28.067 481 280 17 14 477 4 435 1.60e-35 137
MS.gene59335.t1 AT4G15490 26.761 497 295 18 3 471 4 459 1.99e-35 138
MS.gene59335.t1 AT3G21560 25.615 488 316 14 7 476 12 470 2.42e-35 138
MS.gene59335.t1 AT4G15480 25.786 477 318 11 7 471 19 471 4.12e-35 137
MS.gene59335.t1 AT1G73880 26.914 431 260 15 5 415 12 407 4.24e-35 137
MS.gene59335.t1 AT5G17040 29.091 330 192 10 150 471 35 330 4.80e-35 134
MS.gene59335.t1 AT2G43820 27.163 497 270 16 1 467 1 435 5.34e-35 136
MS.gene59335.t1 AT2G28080 27.696 473 289 17 14 469 25 461 6.30e-35 137
MS.gene59335.t1 AT3G11340 32.482 274 155 6 197 467 187 433 1.87e-34 135
MS.gene59335.t1 AT5G65550 27.143 490 271 15 5 459 7 445 7.41e-34 133
MS.gene59335.t1 AT1G22370 34.307 274 138 8 211 471 54 298 3.28e-33 128
MS.gene59335.t1 AT3G55700 32.576 264 152 5 211 474 209 446 4.62e-33 131
MS.gene59335.t1 AT2G31750 26.122 490 289 18 5 470 6 446 6.60e-33 130
MS.gene59335.t1 AT2G31750 26.139 505 296 19 5 481 6 461 7.39e-33 131
MS.gene59335.t1 AT5G38010 25.657 495 296 16 4 476 7 451 1.16e-32 130
MS.gene59335.t1 AT5G05890 26.849 365 237 6 110 471 108 445 1.41e-32 129
MS.gene59335.t1 AT4G15550 26.638 458 280 14 7 441 13 437 3.94e-32 129
MS.gene59335.t1 AT5G05870 32.906 234 134 4 241 471 234 447 5.35e-32 128
MS.gene59335.t1 AT5G38040 30.897 301 168 9 178 471 175 442 1.74e-31 126
MS.gene59335.t1 AT2G23260 25.519 482 295 14 4 467 7 442 1.74e-31 126
MS.gene59335.t1 AT1G05560 25.052 483 313 15 7 477 5 450 9.52e-31 124
MS.gene59335.t1 AT5G49690 30.375 293 150 7 187 454 168 431 1.19e-30 124
MS.gene59335.t1 AT1G05560 25.052 483 313 15 7 477 55 500 1.97e-30 124
MS.gene59335.t1 AT5G05900 26.667 480 298 12 3 471 4 440 2.24e-30 123
MS.gene59335.t1 AT1G06000 25.349 501 280 20 3 480 6 435 2.62e-30 123
MS.gene59335.t1 AT5G05860 34.583 240 133 5 239 475 226 444 7.07e-30 122
MS.gene59335.t1 AT4G14090 26.033 484 289 16 4 467 10 444 7.60e-30 122
MS.gene59335.t1 AT4G15500 22.828 495 316 12 1 471 3 455 1.79e-29 121
MS.gene59335.t1 AT1G05530 26.939 490 293 18 7 473 5 452 6.79e-29 119
MS.gene59335.t1 AT3G55710 31.111 270 154 6 211 474 207 450 2.19e-28 117
MS.gene59335.t1 AT2G23250 30.466 279 153 8 209 477 187 434 8.51e-28 115
MS.gene59335.t1 AT4G27570 29.644 253 154 3 202 454 193 421 1.04e-26 112
MS.gene59335.t1 AT4G27560 29.644 253 154 3 202 454 193 421 2.14e-26 112
MS.gene59335.t1 AT1G64910 30.000 250 151 4 206 455 191 416 4.91e-26 110
MS.gene59335.t1 AT2G22590 26.261 476 283 17 5 454 13 446 2.81e-25 108
MS.gene59335.t1 AT3G02100 31.343 268 128 9 195 449 211 435 1.63e-24 106
MS.gene59335.t1 AT5G53990 29.231 260 160 4 197 456 182 417 1.83e-24 106
MS.gene59335.t1 AT5G54010 28.938 273 168 5 183 454 174 421 2.32e-24 105
MS.gene59335.t1 AT1G64920 23.640 478 295 13 2 461 1 426 1.21e-22 100
MS.gene59335.t1 AT3G29630 25.304 494 308 15 2 483 1 445 2.48e-22 99.8
MS.gene59335.t1 AT5G37950 27.740 292 174 8 106 390 76 337 6.29e-22 97.4
MS.gene59335.t1 AT2G22930 25.869 259 168 3 197 455 182 416 1.42e-21 97.4
MS.gene59335.t1 AT1G50580 27.203 261 168 3 196 456 180 418 1.71e-21 97.4
MS.gene59335.t1 AT5G37950 27.907 301 168 10 106 390 76 343 3.23e-21 95.5
MS.gene59335.t1 AT4G09500 26.255 259 167 3 197 455 182 416 6.10e-21 95.5
MS.gene59335.t1 AT3G29630 29.437 231 146 3 253 483 206 419 1.27e-20 94.4
MS.gene59335.t1 AT4G09500 30.220 182 111 2 274 455 226 391 2.84e-19 90.5
MS.gene59335.t1 AT3G22250 29.048 210 112 6 259 458 268 450 1.09e-18 89.0
MS.gene59335.t1 AT5G54060 28.372 215 136 4 241 454 243 440 5.67e-18 87.0
MS.gene59335.t1 AT4G34135 25.740 338 204 12 4 312 8 327 2.32e-12 68.6

Find 144 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACCGCTTTCGATTCT+TGG 0.115382 5.4:+11867732 MS.gene59335:CDS
ATTAACCGTTGATGGGATTT+TGG 0.180078 5.4:+11867848 MS.gene59335:CDS
AGATGGTTACGTCGAAATTT+TGG 0.193825 5.4:-11867326 None:intergenic
ACTAAGGCGGTTATTGAAAA+TGG 0.203582 5.4:+11867903 MS.gene59335:CDS
ACAATGATGTTGAGGCTATT+AGG 0.228543 5.4:-11867417 None:intergenic
TGAGTCAGCAGCGATTTATT+TGG 0.260828 5.4:+11868132 MS.gene59335:CDS
CTAATTCAATGGCGGGAATT+AGG 0.271456 5.4:-11867284 None:intergenic
AAGATTTGTGATCGAATAAA+AGG 0.277855 5.4:-11867528 None:intergenic
ACCACCCTTCTTCGGTTCAT+TGG 0.289370 5.4:-11867982 None:intergenic
CAATGATGTTGAGGCTATTA+GGG 0.291810 5.4:-11867416 None:intergenic
AATCCCAAGGATGGATTGTT+TGG 0.311645 5.4:-11867474 None:intergenic
CTAATTCCCGCCATTGAATT+AGG 0.315315 5.4:+11867285 MS.gene59335:CDS
TGAAACATTTGTTGCACCTT+GGG 0.317017 5.4:+11867785 MS.gene59335:CDS
AGTTAAAGTTAATGAGTATA+AGG 0.338726 5.4:+11868571 MS.gene59335:CDS
GTTCTTATCGTGGACCTCTT+TGG 0.343662 5.4:+11867573 MS.gene59335:CDS
TGCTTAAGCACCCCGAGCTT+TGG 0.361718 5.4:-11868693 None:intergenic
TCGGTCATATATTTGTCATT+TGG 0.365839 5.4:+11868053 MS.gene59335:CDS
GAGTCAGCAGCGATTTATTT+GGG 0.367043 5.4:+11868133 MS.gene59335:CDS
CTAAGGCGGTTATTGAAAAT+GGG 0.367692 5.4:+11867904 MS.gene59335:CDS
GGTGAACACGTGGCAAGATC+TGG 0.384639 5.4:+11867869 MS.gene59335:CDS
AGGGAAATATTAACCGTTGA+TGG 0.384981 5.4:+11867840 MS.gene59335:CDS
GAGGGAGTTGGCTTACGGTT+TGG 0.386069 5.4:+11868106 MS.gene59335:CDS
GAGAAAGCTTCGTCTGTGTT+TGG 0.391515 5.4:+11868602 MS.gene59335:CDS
TTCGATTCTTGGTTGTGAAC+CGG 0.393108 5.4:+11867743 MS.gene59335:CDS
AACTGTGGTGGATTACTTGC+CGG 0.398081 5.4:+11868223 MS.gene59335:CDS
TTGTGAACCGGTTCGGTTTG+AGG 0.405899 5.4:+11867755 MS.gene59335:CDS
TGACCGACTCAGCCGGTTGC+CGG 0.409864 5.4:-11868037 None:intergenic
TCACTCTCACCACCCTTCTT+CGG 0.418950 5.4:-11867990 None:intergenic
GAGCTTTGGCTTCAGATCCT+TGG 0.420922 5.4:-11868679 None:intergenic
GTCACAAAACCACCCGTTGA+TGG 0.428969 5.4:-11868323 None:intergenic
TTCTTGGTTGTGAACCGGTT+CGG 0.442022 5.4:+11867748 MS.gene59335:CDS
GAGTTGGCTTGACCGGCAAC+CGG 0.442794 5.4:+11868025 MS.gene59335:CDS
CTTTGGCTTCAGATCCTTGG+TGG 0.442832 5.4:-11868676 None:intergenic
AACAGATGGAGGATTCTTCA+TGG 0.448895 5.4:-11867553 None:intergenic
CTCAGCTTGTGGGGCCCACA+TGG 0.449094 5.4:-11868288 None:intergenic
GTTAATGAGTATAAGGTAAG+TGG 0.459473 5.4:+11868578 MS.gene59335:CDS
CAAATGAGGGAGTTGGCTTA+CGG 0.461895 5.4:+11868101 MS.gene59335:CDS
TTGAAACATTTGTTGCACCT+TGG 0.462520 5.4:+11867784 MS.gene59335:CDS
AGGATCTGAAGCCAAAGCTC+GGG 0.464549 5.4:+11868682 MS.gene59335:CDS
ATCCCAAGGATGGATTGTTT+GGG 0.467520 5.4:-11867473 None:intergenic
AAGACGTTTGCCTAATTCAA+TGG 0.467707 5.4:-11867295 None:intergenic
TCTGGAGCCAACAGCTACTA+AGG 0.469308 5.4:+11867887 MS.gene59335:CDS
GACCCAAACAATCCATCCTT+GGG 0.471552 5.4:+11867471 MS.gene59335:CDS
GGAGCTTGGTGTGGCGGTGA+AGG 0.473757 5.4:+11868451 MS.gene59335:CDS
GGCAACGACAACGGTGGCGG+AGG 0.476716 5.4:+11868472 MS.gene59335:CDS
AAGAACCAATGAACCGAAGA+AGG 0.476806 5.4:+11867977 MS.gene59335:CDS
TCTTCTAGCCAGTCCTGGCA+TGG 0.479572 5.4:+11867257 MS.gene59335:CDS
TGACCCAAACAATCCATCCT+TGG 0.481784 5.4:+11867470 MS.gene59335:CDS
TTCAACGTTGCGGGTGCAGA+TGG 0.491511 5.4:+11868197 MS.gene59335:CDS
GTGTTGGAGAGTATTCTTAA+CGG 0.492493 5.4:+11868365 MS.gene59335:CDS
ATATTAAAACATCCATCAAC+GGG 0.492704 5.4:+11868311 MS.gene59335:CDS
AAAGGACCGGTTTATCCGAT+TGG 0.495178 5.4:+11867945 MS.gene59335:CDS
AGCGGTCCAATCGGATAAAC+CGG 0.497350 5.4:-11867951 None:intergenic
GCAGTTCTTCTAGCCAGTCC+TGG 0.507678 5.4:+11867252 MS.gene59335:CDS
AGGGCTTTGTGTTCCCATGT+GGG 0.512578 5.4:+11868274 MS.gene59335:CDS
TAGGTGTCCCATGCCAGGAC+TGG 0.514601 5.4:-11867265 None:intergenic
AAGGTGCAACAAATGTTTCA+AGG 0.516516 5.4:-11867782 None:intergenic
AGGAAAGTTTGTGAAAGGAC+CGG 0.516563 5.4:+11867932 MS.gene59335:CDS
ACAATTTGTAATCCCAAGGA+TGG 0.518037 5.4:-11867483 None:intergenic
GGAATTAGGTGTCCCATGCC+AGG 0.520385 5.4:-11867270 None:intergenic
CATGTGCAACTCACGTGCCA+TGG 0.524195 5.4:-11867610 None:intergenic
GGGAAATATTAACCGTTGAT+GGG 0.526221 5.4:+11867841 MS.gene59335:CDS
AGGGTATCCTCAAACCGAAC+CGG 0.526804 5.4:-11867762 None:intergenic
TGAATAGGACAAAAGAGGTA+GGG 0.527801 5.4:+11868255 MS.gene59335:CDS
AAGGATCTGAAGCCAAAGCT+CGG 0.532679 5.4:+11868681 MS.gene59335:CDS
TTGAATAGGACAAAAGAGGT+AGG 0.532740 5.4:+11868254 MS.gene59335:CDS
GTTCTTACTAGCGGTCCAAT+CGG 0.536183 5.4:-11867960 None:intergenic
CGTTTGCCTAATTCAATGGC+GGG 0.536332 5.4:-11867291 None:intergenic
TAGGGCTTTGTGTTCCCATG+TGG 0.539065 5.4:+11868273 MS.gene59335:CDS
GGAAGTGATTAGAAGAGTGA+TGG 0.539334 5.4:+11868523 MS.gene59335:CDS
TGACCGGCAACCGGCTGAGT+CGG 0.540269 5.4:+11868034 MS.gene59335:CDS
ACGGTGTTCCGATGGTTGCA+TGG 0.543830 5.4:+11868384 MS.gene59335:CDS
CCTCATTTGACCTTCCGACA+TGG 0.544554 5.4:-11868087 None:intergenic
TAGAACAATTTGTAATCCCA+AGG 0.551662 5.4:-11867487 None:intergenic
TGCGGATGCATTATCCTCTG+TGG 0.553495 5.4:-11868168 None:intergenic
TATTCTTAACGGTGTTCCGA+TGG 0.555061 5.4:+11868376 MS.gene59335:CDS
CTTCATCTGTGATGAAAGGA+AGG 0.555836 5.4:-11867686 None:intergenic
GCAACGACAACGGTGGCGGA+GGG 0.556375 5.4:+11868473 MS.gene59335:CDS
AACAGCAGTGAACCAAGCAT+TGG 0.558371 5.4:-11867655 None:intergenic
GCGGTTCATGATTCTTAGCA+TGG 0.558955 5.4:-11867719 None:intergenic
GAAGGCAACGACAACGGTGG+CGG 0.559539 5.4:+11868469 MS.gene59335:CDS
ATATATTTGTCATTTGGAAG+TGG 0.559628 5.4:+11868059 MS.gene59335:CDS
CCATGTCGGAAGGTCAAATG+AGG 0.560519 5.4:+11868087 MS.gene59335:CDS
ACGACAACGGTGGCGGAGGG+TGG 0.561139 5.4:+11868476 MS.gene59335:CDS
GGTTCATTGGTTCTTACTAG+CGG 0.562790 5.4:-11867969 None:intergenic
ATTACAAATTGTTCTAACCA+TGG 0.565528 5.4:+11867494 MS.gene59335:CDS
ATCTTCTGCTCTGCATAAAG+CGG 0.565650 5.4:-11868407 None:intergenic
GATTTATTTGGGTGGTGCGG+CGG 0.565726 5.4:+11868144 MS.gene59335:CDS
CTTCTAGCCAGTCCTGGCAT+GGG 0.570142 5.4:+11867258 MS.gene59335:CDS
GGAAGGTCAAATGAGGGAGT+TGG 0.572490 5.4:+11868094 MS.gene59335:CDS
AAATATATGACCGACTCAGC+CGG 0.572985 5.4:-11868044 None:intergenic
AAAGCTTCATCTGTGATGAA+AGG 0.573302 5.4:-11867690 None:intergenic
TCAGCTTGTGGGGCCCACAT+GGG 0.580375 5.4:-11868287 None:intergenic
AGTTTGTCAGAGACATCGAC+AGG 0.580495 5.4:-11867447 None:intergenic
GCGGATGCATTATCCTCTGT+GGG 0.580659 5.4:-11868167 None:intergenic
ATTTGTCATTTGGAAGTGGT+AGG 0.581708 5.4:+11868063 MS.gene59335:CDS
ATGTGCAACTCACGTGCCAT+GGG 0.583729 5.4:-11867609 None:intergenic
GGCGGTTGTGACGACGAAGA+TGG 0.586383 5.4:-11867343 None:intergenic
GTGGTGGATTACTTGCCGGA+GGG 0.587242 5.4:+11868227 MS.gene59335:CDS
GATATTAAAACATCCATCAA+CGG 0.588547 5.4:+11868310 MS.gene59335:CDS
TCCTCCATCTGTTCTTATCG+TGG 0.589140 5.4:+11867563 MS.gene59335:CDS
TAAGGCGGTTATTGAAAATG+GGG 0.589730 5.4:+11867905 MS.gene59335:CDS
ATAACCGCCTTAGTAGCTGT+TGG 0.593391 5.4:-11867894 None:intergenic
AGGTGCAACAAATGTTTCAA+GGG 0.594651 5.4:-11867781 None:intergenic
TGGTGGATTACTTGCCGGAG+GGG 0.599013 5.4:+11868228 MS.gene59335:CDS
AGAGTGATGGTTGATGAAGA+AGG 0.601665 5.4:+11868536 MS.gene59335:CDS
AGGTCCACGATAAGAACAGA+TGG 0.601849 5.4:-11867567 None:intergenic
GGTGGTGCGGCGGCCCACAG+AGG 0.603216 5.4:+11868154 MS.gene59335:CDS
AAAGTTACGTTGAAGTCACA+AGG 0.605910 5.4:+11867820 MS.gene59335:CDS
TAAAGCGGCCATGCAACCAT+CGG 0.607242 5.4:-11868392 None:intergenic
ATCAGAGGAGCTTGGTGTGG+CGG 0.609932 5.4:+11868445 MS.gene59335:CDS
AGCGATTTATTTGGGTGGTG+CGG 0.610105 5.4:+11868141 MS.gene59335:CDS
GAAACATTTGTTGCACCTTG+GGG 0.615035 5.4:+11867786 MS.gene59335:CDS
TCAGCAGCGATTTATTTGGG+TGG 0.615645 5.4:+11868136 MS.gene59335:CDS
CTGTGGTTGGAATTCTGTGT+TGG 0.615758 5.4:+11868349 MS.gene59335:CDS
TGTGGTGGATTACTTGCCGG+AGG 0.621282 5.4:+11868226 MS.gene59335:CDS
GGATCTGAAGCCAAAGCTCG+GGG 0.626278 5.4:+11868683 MS.gene59335:CDS
GGCGGTGAAGGCAACGACAA+CGG 0.626813 5.4:+11868463 MS.gene59335:CDS
ACCAATGAACCGAAGAAGGG+TGG 0.627308 5.4:+11867981 MS.gene59335:CDS
AGTGGTAGGACCATGTCGGA+AGG 0.632220 5.4:+11868077 MS.gene59335:CDS
AGAACCAATGAACCGAAGAA+GGG 0.634254 5.4:+11867978 MS.gene59335:CDS
ACGTTTGCCTAATTCAATGG+CGG 0.635641 5.4:-11867292 None:intergenic
TGTGTCTGAATCTGAGGTGG+CGG 0.636604 5.4:-11867361 None:intergenic
GTTATCAGAGGAGCTTGGTG+TGG 0.639672 5.4:+11868442 MS.gene59335:CDS
GAATGCTACTATGTTATCAG+AGG 0.641274 5.4:+11868430 MS.gene59335:CDS
ACTATGTTATCAGAGGAGCT+TGG 0.641970 5.4:+11868437 MS.gene59335:CDS
TTAAAACATCCATCAACGGG+TGG 0.642894 5.4:+11868314 MS.gene59335:CDS
TGATGTGTCTGAATCTGAGG+TGG 0.643996 5.4:-11867364 None:intergenic
TGGAAGTGGTAGGACCATGT+CGG 0.659481 5.4:+11868073 MS.gene59335:CDS
TCCACGATAAGAACAGATGG+AGG 0.660881 5.4:-11867564 None:intergenic
GAAAAGCTGCAGTACCAAAG+AGG 0.662878 5.4:-11867587 None:intergenic
GTTCACCAAAATCCCATCAA+CGG 0.668646 5.4:-11867853 None:intergenic
TGCAGATGGAACAACTGTGG+TGG 0.673467 5.4:+11868211 MS.gene59335:CDS
CATGTCGGAAGGTCAAATGA+GGG 0.688297 5.4:+11868088 MS.gene59335:CDS
TGTGAACTTTATCTCCACCA+AGG 0.688348 5.4:+11868662 MS.gene59335:CDS
TTGTCAGAGACATCGACAGG+AGG 0.693714 5.4:-11867444 None:intergenic
GAGGTGTTACAATGATGTTG+AGG 0.706200 5.4:-11867425 None:intergenic
AAGTTACGTTGAAGTCACAA+GGG 0.708644 5.4:+11867821 MS.gene59335:CDS
GGTGAAGGCAACGACAACGG+TGG 0.716471 5.4:+11868466 MS.gene59335:CDS
AAAAGGAAGAGATTCAACCA+TGG 0.722073 5.4:-11867511 None:intergenic
TGTTTGTAGAGAAAATATAG+CGG 0.725903 5.4:+11868502 MS.gene59335:CDS
TCACAACCAAGAATCGAAAG+CGG 0.733034 5.4:-11867738 None:intergenic
GGAGCCAACAGCTACTAAGG+CGG 0.734831 5.4:+11867890 MS.gene59335:CDS
GGGTGCAGATGGAACAACTG+TGG 0.777902 5.4:+11868208 MS.gene59335:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTAAAGTTAATGAGTATA+AGG + chr5.4:11868571-11868590 MS.gene59335:CDS 20.0%
!!! GTGAAAATTTAATTTTGAGT+TGG + chr5.4:11868009-11868028 MS.gene59335:CDS 20.0%
! AAGATTTGTGATCGAATAAA+AGG - chr5.4:11867531-11867550 None:intergenic 25.0%
! ATATTAAAACATCCATCAAC+GGG + chr5.4:11868311-11868330 MS.gene59335:CDS 25.0%
! ATTACAAATTGTTCTAACCA+TGG + chr5.4:11867494-11867513 MS.gene59335:CDS 25.0%
! GATATTAAAACATCCATCAA+CGG + chr5.4:11868310-11868329 MS.gene59335:CDS 25.0%
! TGTTTGTAGAGAAAATATAG+CGG + chr5.4:11868502-11868521 MS.gene59335:CDS 25.0%
!! ATATATTTGTCATTTGGAAG+TGG + chr5.4:11868059-11868078 MS.gene59335:CDS 25.0%
!! TCAACGTAACTTTTATGAAT+AGG - chr5.4:11867813-11867832 None:intergenic 25.0%
!! TCATGAATCTTTTTGTAAGA+TGG + chr5.4:11868631-11868650 MS.gene59335:CDS 25.0%
GTTAATGAGTATAAGGTAAG+TGG + chr5.4:11868578-11868597 MS.gene59335:CDS 30.0%
TAGAACAATTTGTAATCCCA+AGG - chr5.4:11867490-11867509 None:intergenic 30.0%
TCGGTCATATATTTGTCATT+TGG + chr5.4:11868053-11868072 MS.gene59335:CDS 30.0%
! GTTATTGAAAATGGGGTTTT+AGG + chr5.4:11867912-11867931 MS.gene59335:CDS 30.0%
! GTTTTTGAATAGGACAAAAG+AGG + chr5.4:11868250-11868269 MS.gene59335:CDS 30.0%
! TTTTAATATCTCAGCTTGTG+GGG - chr5.4:11868300-11868319 None:intergenic 30.0%
!! GTTTTAATATCTCAGCTTGT+GGG - chr5.4:11868301-11868320 None:intergenic 30.0%
!!! AAGAACTGCATGAGTTTTTT+GGG - chr5.4:11867241-11867260 None:intergenic 30.0%
!!! GTTTTAGGAAAGTTTGTGAA+AGG + chr5.4:11867927-11867946 MS.gene59335:CDS 30.0%
!!! TGTTTTAATATCTCAGCTTG+TGG - chr5.4:11868302-11868321 None:intergenic 30.0%
AAAAGGAAGAGATTCAACCA+TGG - chr5.4:11867514-11867533 None:intergenic 35.0%
AAAGCTTCATCTGTGATGAA+AGG - chr5.4:11867693-11867712 None:intergenic 35.0%
AAAGTTACGTTGAAGTCACA+AGG + chr5.4:11867820-11867839 MS.gene59335:CDS 35.0%
AAGACGTTTGCCTAATTCAA+TGG - chr5.4:11867298-11867317 None:intergenic 35.0%
AAGGTGCAACAAATGTTTCA+AGG - chr5.4:11867785-11867804 None:intergenic 35.0%
AAGTTACGTTGAAGTCACAA+GGG + chr5.4:11867821-11867840 MS.gene59335:CDS 35.0%
ACAATGATGTTGAGGCTATT+AGG - chr5.4:11867420-11867439 None:intergenic 35.0%
ACAATTTGTAATCCCAAGGA+TGG - chr5.4:11867486-11867505 None:intergenic 35.0%
ACTAAGGCGGTTATTGAAAA+TGG + chr5.4:11867903-11867922 MS.gene59335:CDS 35.0%
AGGGAAATATTAACCGTTGA+TGG + chr5.4:11867840-11867859 MS.gene59335:CDS 35.0%
AGGTGCAACAAATGTTTCAA+GGG - chr5.4:11867784-11867803 None:intergenic 35.0%
CAATGATGTTGAGGCTATTA+GGG - chr5.4:11867419-11867438 None:intergenic 35.0%
CTAAGGCGGTTATTGAAAAT+GGG + chr5.4:11867904-11867923 MS.gene59335:CDS 35.0%
GAATGCTACTATGTTATCAG+AGG + chr5.4:11868430-11868449 MS.gene59335:CDS 35.0%
GGGAAATATTAACCGTTGAT+GGG + chr5.4:11867841-11867860 MS.gene59335:CDS 35.0%
TAAGGCGGTTATTGAAAATG+GGG + chr5.4:11867905-11867924 MS.gene59335:CDS 35.0%
TGAATAGGACAAAAGAGGTA+GGG + chr5.4:11868255-11868274 MS.gene59335:CDS 35.0%
TTGAATAGGACAAAAGAGGT+AGG + chr5.4:11868254-11868273 MS.gene59335:CDS 35.0%
! AGATGGTTACGTCGAAATTT+TGG - chr5.4:11867329-11867348 None:intergenic 35.0%
! ATTTGTCATTTGGAAGTGGT+AGG + chr5.4:11868063-11868082 MS.gene59335:CDS 35.0%
! TGAAACATTTGTTGCACCTT+GGG + chr5.4:11867785-11867804 MS.gene59335:CDS 35.0%
! TTGAAACATTTGTTGCACCT+TGG + chr5.4:11867784-11867803 MS.gene59335:CDS 35.0%
! TTTTCTTTGCAACCAATGCT+TGG + chr5.4:11867643-11867662 MS.gene59335:CDS 35.0%
! TTTTGATGTGTCTGAATCTG+AGG - chr5.4:11867370-11867389 None:intergenic 35.0%
!! ATTAACCGTTGATGGGATTT+TGG + chr5.4:11867848-11867867 MS.gene59335:CDS 35.0%
!! GTGTTGGAGAGTATTCTTAA+CGG + chr5.4:11868365-11868384 MS.gene59335:CDS 35.0%
!!! GAAGAACTGCATGAGTTTTT+TGG - chr5.4:11867242-11867261 None:intergenic 35.0%
!!! TAATTTTGAGTTGGCTTGAC+CGG + chr5.4:11868018-11868037 MS.gene59335:CDS 35.0%
AACAGATGGAGGATTCTTCA+TGG - chr5.4:11867556-11867575 None:intergenic 40.0%
AAGAACCAATGAACCGAAGA+AGG + chr5.4:11867977-11867996 MS.gene59335:CDS 40.0%
ACGTTTGCCTAATTCAATGG+CGG - chr5.4:11867295-11867314 None:intergenic 40.0%
ACTATGTTATCAGAGGAGCT+TGG + chr5.4:11868437-11868456 MS.gene59335:CDS 40.0%
AGAACCAATGAACCGAAGAA+GGG + chr5.4:11867978-11867997 MS.gene59335:CDS 40.0%
AGGAAAGTTTGTGAAAGGAC+CGG + chr5.4:11867932-11867951 MS.gene59335:CDS 40.0%
ATCTTCTGCTCTGCATAAAG+CGG - chr5.4:11868410-11868429 None:intergenic 40.0%
CTAATTCCCGCCATTGAATT+AGG + chr5.4:11867285-11867304 MS.gene59335:CDS 40.0%
CTTCATCTGTGATGAAAGGA+AGG - chr5.4:11867689-11867708 None:intergenic 40.0%
GAGTCAGCAGCGATTTATTT+GGG + chr5.4:11868133-11868152 MS.gene59335:CDS 40.0%
GGAAGTGATTAGAAGAGTGA+TGG + chr5.4:11868523-11868542 MS.gene59335:CDS 40.0%
GTTCACCAAAATCCCATCAA+CGG - chr5.4:11867856-11867875 None:intergenic 40.0%
TATTCTTAACGGTGTTCCGA+TGG + chr5.4:11868376-11868395 MS.gene59335:CDS 40.0%
TCACAACCAAGAATCGAAAG+CGG - chr5.4:11867741-11867760 None:intergenic 40.0%
TGAGTCAGCAGCGATTTATT+TGG + chr5.4:11868132-11868151 MS.gene59335:CDS 40.0%
TGTGAACTTTATCTCCACCA+AGG + chr5.4:11868662-11868681 MS.gene59335:CDS 40.0%
TTAAAACATCCATCAACGGG+TGG + chr5.4:11868314-11868333 MS.gene59335:CDS 40.0%
TTCGATTCTTGGTTGTGAAC+CGG + chr5.4:11867743-11867762 MS.gene59335:CDS 40.0%
! AAATATATGACCGACTCAGC+CGG - chr5.4:11868047-11868066 None:intergenic 40.0%
! CTAATTCAATGGCGGGAATT+AGG - chr5.4:11867287-11867306 None:intergenic 40.0%
! CTTTTATGAATAGGTCCCCA+AGG - chr5.4:11867804-11867823 None:intergenic 40.0%
! GAAACATTTGTTGCACCTTG+GGG + chr5.4:11867786-11867805 MS.gene59335:CDS 40.0%
! GAGGTGTTACAATGATGTTG+AGG - chr5.4:11867428-11867447 None:intergenic 40.0%
! TGGTTACGTCGAAATTTTGG+TGG - chr5.4:11867326-11867345 None:intergenic 40.0%
!! AATCCCAAGGATGGATTGTT+TGG - chr5.4:11867477-11867496 None:intergenic 40.0%
!! AGAGTGATGGTTGATGAAGA+AGG + chr5.4:11868536-11868555 MS.gene59335:CDS 40.0%
!! ATCCCAAGGATGGATTGTTT+GGG - chr5.4:11867476-11867495 None:intergenic 40.0%
!! GGTTACGTCGAAATTTTGGT+GGG - chr5.4:11867325-11867344 None:intergenic 40.0%
!! GGTTCATTGGTTCTTACTAG+CGG - chr5.4:11867972-11867991 None:intergenic 40.0%
AACAGCAGTGAACCAAGCAT+TGG - chr5.4:11867658-11867677 None:intergenic 45.0%
AGCGATTTATTTGGGTGGTG+CGG + chr5.4:11868141-11868160 MS.gene59335:CDS 45.0%
AGGTCCACGATAAGAACAGA+TGG - chr5.4:11867570-11867589 None:intergenic 45.0%
AGTTTGTCAGAGACATCGAC+AGG - chr5.4:11867450-11867469 None:intergenic 45.0%
ATAACCGCCTTAGTAGCTGT+TGG - chr5.4:11867897-11867916 None:intergenic 45.0%
CATGAACCGCTTTCGATTCT+TGG + chr5.4:11867732-11867751 MS.gene59335:CDS 45.0%
CATGTCGGAAGGTCAAATGA+GGG + chr5.4:11868088-11868107 MS.gene59335:CDS 45.0%
CGCAACGTTGAAAAACGTTG+CGG - chr5.4:11868189-11868208 None:intergenic 45.0%
CGTTTGCCTAATTCAATGGC+GGG - chr5.4:11867294-11867313 None:intergenic 45.0%
CTGTGGTTGGAATTCTGTGT+TGG + chr5.4:11868349-11868368 MS.gene59335:CDS 45.0%
GAAAAGCTGCAGTACCAAAG+AGG - chr5.4:11867590-11867609 None:intergenic 45.0%
GACCCAAACAATCCATCCTT+GGG + chr5.4:11867471-11867490 MS.gene59335:CDS 45.0%
GAGAAAGCTTCGTCTGTGTT+TGG + chr5.4:11868602-11868621 MS.gene59335:CDS 45.0%
GCGGTTCATGATTCTTAGCA+TGG - chr5.4:11867722-11867741 None:intergenic 45.0%
GTCCTATTCAAAAACCCCTC+CGG - chr5.4:11868245-11868264 None:intergenic 45.0%
GTTCTTACTAGCGGTCCAAT+CGG - chr5.4:11867963-11867982 None:intergenic 45.0%
GTTCTTATCGTGGACCTCTT+TGG + chr5.4:11867573-11867592 MS.gene59335:CDS 45.0%
TCAGCAGCGATTTATTTGGG+TGG + chr5.4:11868136-11868155 MS.gene59335:CDS 45.0%
TCCACGATAAGAACAGATGG+AGG - chr5.4:11867567-11867586 None:intergenic 45.0%
TCCTCCATCTGTTCTTATCG+TGG + chr5.4:11867563-11867582 MS.gene59335:CDS 45.0%
TGACCCAAACAATCCATCCT+TGG + chr5.4:11867470-11867489 MS.gene59335:CDS 45.0%
TGATGTGTCTGAATCTGAGG+TGG - chr5.4:11867367-11867386 None:intergenic 45.0%
TTCTTGGTTGTGAACCGGTT+CGG + chr5.4:11867748-11867767 MS.gene59335:CDS 45.0%
! AAAGGACCGGTTTATCCGAT+TGG + chr5.4:11867945-11867964 MS.gene59335:CDS 45.0%
! AAGGATCTGAAGCCAAAGCT+CGG + chr5.4:11868681-11868700 MS.gene59335:CDS 45.0%
! CAAATGAGGGAGTTGGCTTA+CGG + chr5.4:11868101-11868120 MS.gene59335:CDS 45.0%
! GTTTTGTGACACACTGTGGT+TGG + chr5.4:11868336-11868355 MS.gene59335:CDS 45.0%
!! AACTGTGGTGGATTACTTGC+CGG + chr5.4:11868223-11868242 MS.gene59335:CDS 45.0%
!! ATGGGATTTTGGTGAACACG+TGG + chr5.4:11867859-11867878 MS.gene59335:CDS 45.0%
!! CGCAACGTTTTTCAACGTTG+CGG + chr5.4:11868187-11868206 MS.gene59335:CDS 45.0%
!! GCAACGTTTTTCAACGTTGC+GGG + chr5.4:11868188-11868207 MS.gene59335:CDS 45.0%
!! TACGTCGAAATTTTGGTGGG+TGG - chr5.4:11867322-11867341 None:intergenic 45.0%
ACCAATGAACCGAAGAAGGG+TGG + chr5.4:11867981-11868000 MS.gene59335:CDS 50.0%
ACCACCCTTCTTCGGTTCAT+TGG - chr5.4:11867985-11868004 None:intergenic 50.0%
AGCGGTCCAATCGGATAAAC+CGG - chr5.4:11867954-11867973 None:intergenic 50.0%
ATGTGCAACTCACGTGCCAT+GGG - chr5.4:11867612-11867631 None:intergenic 50.0%
CCATGTCGGAAGGTCAAATG+AGG + chr5.4:11868087-11868106 MS.gene59335:CDS 50.0%
CCTCATTTGACCTTCCGACA+TGG - chr5.4:11868090-11868109 None:intergenic 50.0%
GATTTATTTGGGTGGTGCGG+CGG + chr5.4:11868144-11868163 MS.gene59335:CDS 50.0%
GCGGATGCATTATCCTCTGT+GGG - chr5.4:11868170-11868189 None:intergenic 50.0%
GGAAGGTCAAATGAGGGAGT+TGG + chr5.4:11868094-11868113 MS.gene59335:CDS 50.0%
GTCACAAAACCACCCGTTGA+TGG - chr5.4:11868326-11868345 None:intergenic 50.0%
TAAAGCGGCCATGCAACCAT+CGG - chr5.4:11868395-11868414 None:intergenic 50.0%
TCACTCTCACCACCCTTCTT+CGG - chr5.4:11867993-11868012 None:intergenic 50.0%
TGCAGATGGAACAACTGTGG+TGG + chr5.4:11868211-11868230 MS.gene59335:CDS 50.0%
TGCGGATGCATTATCCTCTG+TGG - chr5.4:11868171-11868190 None:intergenic 50.0%
TGGAAGTGGTAGGACCATGT+CGG + chr5.4:11868073-11868092 MS.gene59335:CDS 50.0%
TTGTCAGAGACATCGACAGG+AGG - chr5.4:11867447-11867466 None:intergenic 50.0%
! AGGATCTGAAGCCAAAGCTC+GGG + chr5.4:11868682-11868701 MS.gene59335:CDS 50.0%
! AGGGCTTTGTGTTCCCATGT+GGG + chr5.4:11868274-11868293 MS.gene59335:CDS 50.0%
! AGGGTATCCTCAAACCGAAC+CGG - chr5.4:11867765-11867784 None:intergenic 50.0%
! CTTTGGCTTCAGATCCTTGG+TGG - chr5.4:11868679-11868698 None:intergenic 50.0%
! GAGCTTTGGCTTCAGATCCT+TGG - chr5.4:11868682-11868701 None:intergenic 50.0%
! GTTATCAGAGGAGCTTGGTG+TGG + chr5.4:11868442-11868461 MS.gene59335:CDS 50.0%
! TAGGGCTTTGTGTTCCCATG+TGG + chr5.4:11868273-11868292 MS.gene59335:CDS 50.0%
! TCTGGAGCCAACAGCTACTA+AGG + chr5.4:11867887-11867906 MS.gene59335:CDS 50.0%
! TGCCGGAGGGGTTTTTGAAT+AGG + chr5.4:11868240-11868259 MS.gene59335:CDS 50.0%
! TGGTACTGCAGCTTTTCCCA+TGG + chr5.4:11867593-11867612 MS.gene59335:CDS 50.0%
! TGTGTCTGAATCTGAGGTGG+CGG - chr5.4:11867364-11867383 None:intergenic 50.0%
!! TTGTGAACCGGTTCGGTTTG+AGG + chr5.4:11867755-11867774 MS.gene59335:CDS 50.0%
!!! GGTGGTTTTGTGACACACTG+TGG + chr5.4:11868332-11868351 MS.gene59335:CDS 50.0%
ACGGTGTTCCGATGGTTGCA+TGG + chr5.4:11868384-11868403 MS.gene59335:CDS 55.0%
AGTGGTAGGACCATGTCGGA+AGG + chr5.4:11868077-11868096 MS.gene59335:CDS 55.0%
CATGTGCAACTCACGTGCCA+TGG - chr5.4:11867613-11867632 None:intergenic 55.0%
CTTCTAGCCAGTCCTGGCAT+GGG + chr5.4:11867258-11867277 MS.gene59335:CDS 55.0%
GCAGTTCTTCTAGCCAGTCC+TGG + chr5.4:11867252-11867271 MS.gene59335:CDS 55.0%
GGAATTAGGTGTCCCATGCC+AGG - chr5.4:11867273-11867292 None:intergenic 55.0%
GGAGCCAACAGCTACTAAGG+CGG + chr5.4:11867890-11867909 MS.gene59335:CDS 55.0%
GGGTGCAGATGGAACAACTG+TGG + chr5.4:11868208-11868227 MS.gene59335:CDS 55.0%
GGTGAACACGTGGCAAGATC+TGG + chr5.4:11867869-11867888 MS.gene59335:CDS 55.0%
TCTTCTAGCCAGTCCTGGCA+TGG + chr5.4:11867257-11867276 MS.gene59335:CDS 55.0%
TTCAACGTTGCGGGTGCAGA+TGG + chr5.4:11868197-11868216 MS.gene59335:CDS 55.0%
! GAGGGAGTTGGCTTACGGTT+TGG + chr5.4:11868106-11868125 MS.gene59335:CDS 55.0%
! GGATCTGAAGCCAAAGCTCG+GGG + chr5.4:11868683-11868702 MS.gene59335:CDS 55.0%
!! ATCAGAGGAGCTTGGTGTGG+CGG + chr5.4:11868445-11868464 MS.gene59335:CDS 55.0%
!! GTGGTGGATTACTTGCCGGA+GGG + chr5.4:11868227-11868246 MS.gene59335:CDS 55.0%
!! TGGTGGATTACTTGCCGGAG+GGG + chr5.4:11868228-11868247 MS.gene59335:CDS 55.0%
!! TGTGGTGGATTACTTGCCGG+AGG + chr5.4:11868226-11868245 MS.gene59335:CDS 55.0%
GAAGGCAACGACAACGGTGG+CGG + chr5.4:11868469-11868488 MS.gene59335:CDS 60.0%
GGCGGTGAAGGCAACGACAA+CGG + chr5.4:11868463-11868482 MS.gene59335:CDS 60.0%
GGCGGTTGTGACGACGAAGA+TGG - chr5.4:11867346-11867365 None:intergenic 60.0%
GGTGAAGGCAACGACAACGG+TGG + chr5.4:11868466-11868485 MS.gene59335:CDS 60.0%
TAGGTGTCCCATGCCAGGAC+TGG - chr5.4:11867268-11867287 None:intergenic 60.0%
TCAGCTTGTGGGGCCCACAT+GGG - chr5.4:11868290-11868309 None:intergenic 60.0%
!! GAGTTGGCTTGACCGGCAAC+CGG + chr5.4:11868025-11868044 MS.gene59335:CDS 60.0%
CTCAGCTTGTGGGGCCCACA+TGG - chr5.4:11868291-11868310 None:intergenic 65.0%
TGACCGGCAACCGGCTGAGT+CGG + chr5.4:11868034-11868053 MS.gene59335:CDS 65.0%
! TGACCGACTCAGCCGGTTGC+CGG - chr5.4:11868040-11868059 None:intergenic 65.0%
!! GCAACGACAACGGTGGCGGA+GGG + chr5.4:11868473-11868492 MS.gene59335:CDS 65.0%
!! GGAGCTTGGTGTGGCGGTGA+AGG + chr5.4:11868451-11868470 MS.gene59335:CDS 65.0%
! GGCAACGACAACGGTGGCGG+AGG + chr5.4:11868472-11868491 MS.gene59335:CDS 70.0%
!! ACGACAACGGTGGCGGAGGG+TGG + chr5.4:11868476-11868495 MS.gene59335:CDS 70.0%
! GGTGGTGCGGCGGCCCACAG+AGG + chr5.4:11868154-11868173 MS.gene59335:CDS 80.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 11867231 11868712 11867231 ID=MS.gene59335
chr5.4 mRNA 11867231 11868712 11867231 ID=MS.gene59335.t1;Parent=MS.gene59335
chr5.4 exon 11867231 11868712 11867231 ID=MS.gene59335.t1.exon1;Parent=MS.gene59335.t1
chr5.4 CDS 11867231 11868712 11867231 ID=cds.MS.gene59335.t1;Parent=MS.gene59335.t1
Gene Sequence

>MS.gene59335

ATGGTGTCCCAAAAAACTCATGCAGTTCTTCTAGCCAGTCCTGGCATGGGACACCTAATTCCCGCCATTGAATTAGGCAAACGTCTTACCACCCACCAAAATTTCGACGTAACCATCTTCGTCGTCACAACCGCCACCTCAGATTCAGACACATCAAAATCACATATACTTCAACAAATATCAAGCCCTAATAGCCTCAACATCATTGTAACACCTCCTGTCGATGTCTCTGACAAACTTGACCCAAACAATCCATCCTTGGGATTACAAATTGTTCTAACCATGGTTGAATCTCTTCCTTTTATTCGATCACAAATCTTATCCATGAAGAATCCTCCATCTGTTCTTATCGTGGACCTCTTTGGTACTGCAGCTTTTCCCATGGCACGTGAGTTGCACATGTCTTGTTACGTTTTCTTTGCAACCAATGCTTGGTTCACTGCTGTTAACTTATACCTTCCTTTCATCACAGATGAAGCTTTTTCACGCCATGCTAAGAATCATGAACCGCTTTCGATTCTTGGTTGTGAACCGGTTCGGTTTGAGGATACCCTTGAAACATTTGTTGCACCTTGGGGACCTATTCATAAAAGTTACGTTGAAGTCACAAGGGAAATATTAACCGTTGATGGGATTTTGGTGAACACGTGGCAAGATCTGGAGCCAACAGCTACTAAGGCGGTTATTGAAAATGGGGTTTTAGGAAAGTTTGTGAAAGGACCGGTTTATCCGATTGGACCGCTAGTAAGAACCAATGAACCGAAGAAGGGTGGTGAGAGTGAAAATTTAATTTTGAGTTGGCTTGACCGGCAACCGGCTGAGTCGGTCATATATTTGTCATTTGGAAGTGGTAGGACCATGTCGGAAGGTCAAATGAGGGAGTTGGCTTACGGTTTGGAGCTGAGTCAGCAGCGATTTATTTGGGTGGTGCGGCGGCCCACAGAGGATAATGCATCCGCAACGTTTTTCAACGTTGCGGGTGCAGATGGAACAACTGTGGTGGATTACTTGCCGGAGGGGTTTTTGAATAGGACAAAAGAGGTAGGGCTTTGTGTTCCCATGTGGGCCCCACAAGCTGAGATATTAAAACATCCATCAACGGGTGGTTTTGTGACACACTGTGGTTGGAATTCTGTGTTGGAGAGTATTCTTAACGGTGTTCCGATGGTTGCATGGCCGCTTTATGCAGAGCAGAAGATGAATGCTACTATGTTATCAGAGGAGCTTGGTGTGGCGGTGAAGGCAACGACAACGGTGGCGGAGGGTGGTGTTGTTTGTAGAGAAAATATAGCGGAAGTGATTAGAAGAGTGATGGTTGATGAAGAAGGTGTAGCTATGAGAGTTAAAGTTAATGAGTATAAGGTAAGTGGAGAGAAAGCTTCGTCTGTGTTTGGTTCTTCTCATGAATCTTTTTGTAAGATGGCAAAAGATTGTGAACTTTATCTCCACCAAGGATCTGAAGCCAAAGCTCGGGGTGCTTAA
Protein sequence

>MS.gene59335.t1

MVSQKTHAVLLASPGMGHLIPAIELGKRLTTHQNFDVTIFVVTTATSDSDTSKSHILQQISSPNSLNIIVTPPVDVSDKLDPNNPSLGLQIVLTMVESLPFIRSQILSMKNPPSVLIVDLFGTAAFPMARELHMSCYVFFATNAWFTAVNLYLPFITDEAFSRHAKNHEPLSILGCEPVRFEDTLETFVAPWGPIHKSYVEVTREILTVDGILVNTWQDLEPTATKAVIENGVLGKFVKGPVYPIGPLVRTNEPKKGGESENLILSWLDRQPAESVIYLSFGSGRTMSEGQMRELAYGLELSQQRFIWVVRRPTEDNASATFFNVAGADGTTVVDYLPEGFLNRTKEVGLCVPMWAPQAEILKHPSTGGFVTHCGWNSVLESILNGVPMVAWPLYAEQKMNATMLSEELGVAVKATTTVAEGGVVCRENIAEVIRRVMVDEEGVAMRVKVNEYKVSGEKASSVFGSSHESFCKMAKDCELYLHQGSEAKARGA