AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59333


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59333.t1 MTR_5g019580 90.872 493 45 0 1 493 1 493 0.0 936
MS.gene59333.t1 MTR_5g019580 85.396 493 44 1 1 493 53 517 0.0 863
MS.gene59333.t1 MTR_8g074550 47.639 487 232 12 6 476 7 486 2.88e-143 421
MS.gene59333.t1 MTR_0078s0010 40.289 484 266 13 2 479 1 467 1.29e-108 331
MS.gene59333.t1 MTR_0078s0060 40.496 484 266 13 2 480 1 467 7.23e-106 324
MS.gene59333.t1 MTR_7g117170 38.936 470 270 8 9 475 17 472 1.12e-105 324
MS.gene59333.t1 MTR_7g047030 39.337 483 272 13 2 479 1 467 1.18e-105 323
MS.gene59333.t1 MTR_7g047270 39.337 483 272 13 2 479 1 467 1.18e-105 323
MS.gene59333.t1 MTR_8g006710 37.654 486 267 13 2 475 1 462 3.95e-105 322
MS.gene59333.t1 MTR_8g027885 39.232 469 262 11 10 475 21 469 2.73e-104 320
MS.gene59333.t1 MTR_8g006730 37.603 484 271 13 2 475 1 463 1.41e-103 318
MS.gene59333.t1 MTR_8g027870 38.034 468 269 9 10 475 21 469 1.53e-102 315
MS.gene59333.t1 MTR_0184s0040 38.763 485 275 12 2 481 16 483 2.44e-102 315
MS.gene59333.t1 MTR_0078s0190 38.763 485 275 12 2 481 16 483 2.44e-102 315
MS.gene59333.t1 MTR_8g009055 37.736 477 280 10 2 475 1 463 3.12e-102 314
MS.gene59333.t1 MTR_6g023665 36.756 487 281 13 2 481 8 474 3.69e-101 312
MS.gene59333.t1 MTR_8g008990 37.370 479 281 10 2 475 1 465 1.87e-100 310
MS.gene59333.t1 MTR_6g488280 36.646 483 275 13 2 475 1 461 8.43e-100 308
MS.gene59333.t1 MTR_0428s0010 36.646 483 275 13 2 475 1 461 8.43e-100 308
MS.gene59333.t1 MTR_8g009050 38.347 472 274 10 7 475 6 463 1.94e-98 305
MS.gene59333.t1 MTR_8g009073 36.326 479 282 11 2 475 1 461 7.60e-96 298
MS.gene59333.t1 MTR_8g006270 37.131 474 278 13 4 474 3 459 4.75e-95 296
MS.gene59333.t1 MTR_1g019510 35.759 481 289 10 7 484 6 469 2.29e-94 294
MS.gene59333.t1 MTR_8g465670 34.908 487 283 14 1 474 1 466 2.37e-90 284
MS.gene59333.t1 MTR_8g006260 34.864 479 288 12 5 475 4 466 2.64e-90 284
MS.gene59333.t1 MTR_8g009067 36.093 471 282 9 7 474 6 460 5.23e-90 283
MS.gene59333.t1 MTR_8g009063 34.244 476 298 7 1 474 7 469 1.90e-89 282
MS.gene59333.t1 MTR_7g046490 35.774 478 283 14 2 474 1 459 7.48e-89 280
MS.gene59333.t1 MTR_0184s0030 34.362 486 293 11 2 479 1 468 1.37e-87 277
MS.gene59333.t1 MTR_8g012635 34.304 481 296 10 2 475 1 468 2.00e-87 276
MS.gene59333.t1 MTR_8g077590 34.874 476 284 12 6 475 8 463 3.72e-87 275
MS.gene59333.t1 MTR_6g005600 34.937 478 295 8 5 479 4 468 2.88e-85 271
MS.gene59333.t1 MTR_8g008970 34.591 477 293 9 2 475 1 461 6.77e-84 275
MS.gene59333.t1 MTR_8g008970 36.918 279 151 4 196 474 531 784 3.67e-48 177
MS.gene59333.t1 MTR_8g012650 33.125 480 303 9 2 475 1 468 2.18e-83 266
MS.gene59333.t1 MTR_8g012745 34.719 481 285 11 2 472 1 462 3.57e-83 265
MS.gene59333.t1 MTR_8g006220 33.855 511 265 16 2 475 1 475 1.03e-81 262
MS.gene59333.t1 MTR_6g033625 34.433 485 281 12 5 476 2 462 1.16e-80 258
MS.gene59333.t1 MTR_8g009073 39.244 344 195 6 134 475 1 332 6.31e-79 250
MS.gene59333.t1 MTR_3g009510 33.806 494 299 13 4 483 2 481 1.87e-78 253
MS.gene59333.t1 MTR_8g012630 34.362 486 241 13 2 479 1 416 8.25e-77 247
MS.gene59333.t1 MTR_6g033725 33.817 482 283 12 5 475 2 458 1.11e-76 248
MS.gene59333.t1 MTR_8g009067 37.714 350 208 4 125 474 3 342 1.12e-76 244
MS.gene59333.t1 MTR_6g033615 33.333 480 279 9 5 476 2 448 3.76e-73 239
MS.gene59333.t1 MTR_5g098930 31.959 485 293 14 4 474 2 463 6.65e-71 233
MS.gene59333.t1 MTR_6g033660 33.974 468 279 8 9 467 6 452 2.62e-70 232
MS.gene59333.t1 MTR_5g090630 32.577 485 288 15 4 474 2 461 3.58e-70 231
MS.gene59333.t1 MTR_6g033675 31.743 482 296 9 5 475 2 461 2.29e-67 224
MS.gene59333.t1 MTR_8g012730 35.928 334 186 3 147 479 3 309 4.55e-67 218
MS.gene59333.t1 MTR_5g090700 31.568 491 296 15 4 474 2 472 1.08e-66 223
MS.gene59333.t1 MTR_5g090580 32.520 492 288 19 4 474 2 470 3.43e-66 221
MS.gene59333.t1 MTR_5g090670 32.661 496 284 16 4 474 2 472 4.72e-66 221
MS.gene59333.t1 MTR_2g040530 32.454 493 281 16 5 477 3 463 2.46e-64 216
MS.gene59333.t1 MTR_5g090610 31.006 487 288 15 4 474 2 456 5.71e-64 215
MS.gene59333.t1 MTR_5g090600 31.493 489 276 17 4 474 2 449 2.48e-62 210
MS.gene59333.t1 MTR_5g090620 32.186 494 288 17 4 474 2 471 4.69e-62 210
MS.gene59333.t1 MTR_5g090660 31.361 507 293 19 4 486 2 477 8.51e-62 211
MS.gene59333.t1 MTR_1g019520 45.909 220 114 2 265 484 4 218 2.42e-61 200
MS.gene59333.t1 MTR_2g046820 30.723 498 281 14 5 477 3 461 2.77e-61 207
MS.gene59333.t1 MTR_5g070090 29.918 488 297 16 2 477 6 460 2.56e-58 200
MS.gene59333.t1 MTR_2g046750 30.754 491 293 16 5 477 3 464 6.71e-58 199
MS.gene59333.t1 MTR_5g070040 30.480 479 264 18 2 452 6 443 2.53e-57 197
MS.gene59333.t1 MTR_5g087620 30.143 491 283 16 4 460 7 471 3.10e-50 179
MS.gene59333.t1 MTR_0009s0240 30.118 508 267 21 1 474 1 454 5.53e-48 172
MS.gene59333.t1 MTR_4g485630 28.656 506 292 15 3 477 5 472 2.26e-47 171
MS.gene59333.t1 MTR_6g014250 26.419 511 304 14 1 477 4 476 1.06e-46 169
MS.gene59333.t1 MTR_8g066610 29.126 515 296 16 3 484 5 483 2.40e-45 166
MS.gene59333.t1 MTR_5g464760 28.684 509 283 19 4 474 9 475 1.75e-44 163
MS.gene59333.t1 MTR_4g082820 28.629 496 299 16 1 476 1 461 2.69e-44 162
MS.gene59333.t1 MTR_4g031800 28.740 508 272 19 15 483 17 473 1.82e-43 160
MS.gene59333.t1 MTR_7g102490 29.730 518 290 21 1 477 1 485 3.31e-43 160
MS.gene59333.t1 MTR_4g094220 27.559 508 286 17 1 467 1 467 3.36e-43 159
MS.gene59333.t1 MTR_5g045960 28.824 510 298 18 3 477 5 484 4.83e-43 159
MS.gene59333.t1 MTR_8g090095 31.847 314 163 8 169 447 151 448 5.21e-43 159
MS.gene59333.t1 MTR_6g014220 27.397 511 299 17 1 477 4 476 6.94e-43 159
MS.gene59333.t1 MTR_1g107350 26.572 493 307 14 7 477 8 467 1.91e-42 157
MS.gene59333.t1 MTR_8g466240 28.687 495 283 15 5 477 6 452 2.56e-42 157
MS.gene59333.t1 MTR_8g009840 43.386 189 103 2 286 474 337 521 5.33e-42 157
MS.gene59333.t1 MTR_4g064987 28.016 489 291 18 1 476 1 441 8.48e-42 155
MS.gene59333.t1 MTR_8g064870 26.078 487 315 13 9 477 13 472 9.20e-42 155
MS.gene59333.t1 MTR_6g014290 25.641 507 313 14 1 477 4 476 9.27e-42 155
MS.gene59333.t1 MTR_4g008630 38.967 213 120 4 242 454 236 438 1.03e-41 155
MS.gene59333.t1 MTR_6g014170 28.376 511 292 18 1 484 4 467 1.20e-41 155
MS.gene59333.t1 MTR_1g032490 26.531 490 311 13 7 477 10 469 1.34e-41 155
MS.gene59333.t1 MTR_3g049970 26.572 493 307 14 7 477 9 468 1.54e-41 155
MS.gene59333.t1 MTR_2g098430 27.572 486 274 17 2 452 1 443 1.70e-41 155
MS.gene59333.t1 MTR_3g009490 39.683 189 106 3 291 476 3 186 2.21e-41 147
MS.gene59333.t1 MTR_3g008010 26.718 524 300 19 1 485 4 482 2.38e-41 154
MS.gene59333.t1 MTR_7g011470 27.778 504 290 14 1 477 4 460 2.50e-41 154
MS.gene59333.t1 MTR_7g011470 28.261 506 289 15 1 477 4 464 3.40e-41 154
MS.gene59333.t1 MTR_7g070810 37.600 250 128 7 242 479 243 476 4.02e-41 154
MS.gene59333.t1 MTR_1g029540 37.089 213 125 3 242 454 232 435 6.28e-41 153
MS.gene59333.t1 MTR_3g069710 33.798 287 160 5 195 477 190 450 8.64e-41 152
MS.gene59333.t1 MTR_6g038300 26.721 494 295 14 7 480 11 457 9.39e-41 152
MS.gene59333.t1 MTR_7g070940 35.556 270 138 7 211 467 215 461 1.36e-40 152
MS.gene59333.t1 MTR_6g038240 27.236 492 280 16 3 469 7 445 1.40e-40 152
MS.gene59333.t1 MTR_4g485640 28.200 500 292 17 8 478 210 671 1.64e-40 155
MS.gene59333.t1 MTR_7g070800 26.562 512 286 20 7 474 6 471 2.81e-40 152
MS.gene59333.t1 MTR_5g464810 28.291 509 285 19 6 477 11 476 2.83e-40 151
MS.gene59333.t1 MTR_5g064240 28.291 509 285 19 6 477 11 476 2.83e-40 151
MS.gene59333.t1 MTR_6g013990 32.390 318 176 7 173 480 191 479 3.01e-40 151
MS.gene59333.t1 MTR_8g059425 26.471 510 313 15 4 484 7 483 3.76e-40 151
MS.gene59333.t1 MTR_7g070660 34.629 283 152 8 211 479 217 480 4.29e-40 151
MS.gene59333.t1 MTR_4g064987 27.621 496 290 19 1 476 1 447 4.95e-40 150
MS.gene59333.t1 MTR_5g058320 26.693 502 307 15 1 480 4 466 5.97e-40 150
MS.gene59333.t1 MTR_0036s0220 27.579 504 293 20 7 477 12 476 1.53e-39 149
MS.gene59333.t1 MTR_5g035560 27.088 491 289 13 3 474 7 447 1.65e-39 150
MS.gene59333.t1 MTR_4g024020 28.317 505 287 19 5 468 7 477 2.96e-39 149
MS.gene59333.t1 MTR_5g072830 26.804 485 294 17 7 477 10 447 3.55e-39 148
MS.gene59333.t1 MTR_2g008210 26.782 519 294 21 3 481 7 479 4.27e-39 148
MS.gene59333.t1 MTR_1g107315 25.636 511 311 15 5 484 6 478 7.39e-39 147
MS.gene59333.t1 MTR_1g107360 26.305 498 290 16 9 477 11 460 1.04e-38 147
MS.gene59333.t1 MTR_7g070860 26.834 518 275 19 1 474 1 458 1.35e-38 147
MS.gene59333.t1 MTR_7g102460 28.791 521 289 20 1 477 1 483 1.70e-38 147
MS.gene59333.t1 MTR_5g035580 26.327 490 294 15 3 474 9 449 1.79e-38 146
MS.gene59333.t1 MTR_6g014050 32.209 326 174 11 173 484 192 484 2.08e-38 146
MS.gene59333.t1 MTR_4g485590 37.104 221 109 3 201 413 181 379 2.55e-38 144
MS.gene59333.t1 MTR_3g479520 26.223 511 303 17 2 477 10 481 2.57e-38 146
MS.gene59333.t1 MTR_6g014040 27.237 514 295 19 3 477 6 479 2.80e-38 146
MS.gene59333.t1 MTR_1g107285 25.743 505 287 17 9 477 10 462 4.99e-38 145
MS.gene59333.t1 MTR_6g013450 26.901 513 300 17 5 480 8 482 7.27e-38 145
MS.gene59333.t1 MTR_1g107375 26.358 497 288 15 7 477 8 452 8.08e-38 144
MS.gene59333.t1 MTR_4g117960 26.680 506 293 22 10 477 14 479 8.13e-38 145
MS.gene59333.t1 MTR_1g062380 27.992 518 285 18 7 477 16 492 8.21e-38 145
MS.gene59333.t1 MTR_7g071040 26.769 523 283 20 3 474 13 486 8.42e-38 145
MS.gene59333.t1 MTR_6g038200 27.049 488 278 19 7 469 11 445 8.74e-38 144
MS.gene59333.t1 MTR_0891s0010 30.100 299 166 8 200 486 27 294 9.72e-38 140
MS.gene59333.t1 MTR_6g013440 26.744 516 300 17 3 480 7 482 1.10e-37 144
MS.gene59333.t1 MTR_4g108250 27.961 515 290 17 3 474 7 483 1.55e-37 144
MS.gene59333.t1 MTR_8g083290 27.789 493 289 14 7 471 3 456 1.76e-37 143
MS.gene59333.t1 MTR_7g102550 34.783 299 146 10 207 484 214 484 1.99e-37 144
MS.gene59333.t1 MTR_1g107365 25.455 495 296 15 7 477 45 490 2.09e-37 144
MS.gene59333.t1 MTR_4g128690 31.129 363 201 12 114 467 119 441 2.15e-37 143
MS.gene59333.t1 MTR_6g013920 31.546 317 176 8 173 477 190 477 2.30e-37 143
MS.gene59333.t1 MTR_7g055710 26.901 513 296 19 1 471 1 476 2.53e-37 144
MS.gene59333.t1 MTR_7g070930 26.718 524 282 19 3 474 10 483 3.45e-37 143
MS.gene59333.t1 MTR_4g117890 27.126 494 274 20 17 472 23 468 4.57e-37 142
MS.gene59333.t1 MTR_0536s0020 26.892 502 281 20 17 480 28 481 6.09e-37 142
MS.gene59333.t1 MTR_5g045970 27.022 507 299 16 10 477 17 491 6.28e-37 142
MS.gene59333.t1 MTR_6g038230 27.721 487 286 18 7 474 11 450 7.21e-37 141
MS.gene59333.t1 MTR_0078s0200 30.218 321 203 8 2 314 1 308 7.46e-37 138
MS.gene59333.t1 MTR_7g070780 36.967 211 112 5 265 467 275 472 7.64e-37 142
MS.gene59333.t1 MTR_6g013900 30.915 317 178 8 173 477 190 477 7.69e-37 142
MS.gene59333.t1 MTR_6g035185 26.617 402 235 13 110 481 114 485 7.99e-37 142
MS.gene59333.t1 MTR_4g128720 26.294 483 305 13 4 476 12 453 8.04e-37 141
MS.gene59333.t1 MTR_6g014020 25.969 516 316 15 1 485 4 484 8.44e-37 142
MS.gene59333.t1 MTR_6g014200 28.350 515 291 21 1 477 1 475 1.20e-36 141
MS.gene59333.t1 MTR_6g014270 26.908 524 303 19 1 484 1 484 1.32e-36 141
MS.gene59333.t1 MTR_8g064880 26.069 491 314 14 9 477 11 474 1.46e-36 141
MS.gene59333.t1 MTR_6g038220 26.518 494 272 16 7 469 11 444 2.53e-36 140
MS.gene59333.t1 MTR_0288s0020 24.902 510 296 15 1 477 4 459 3.63e-36 140
MS.gene59333.t1 MTR_7g070740 28.161 522 274 21 4 474 8 479 4.50e-36 140
MS.gene59333.t1 MTR_4g094920 33.333 261 150 7 241 492 246 491 4.84e-36 140
MS.gene59333.t1 MTR_7g013240 25.431 464 285 16 7 457 6 421 5.31e-36 139
MS.gene59333.t1 MTR_6g014310 29.781 319 181 10 172 477 191 479 7.20e-36 139
MS.gene59333.t1 MTR_3g479490 27.043 514 289 23 2 474 1 469 8.24e-36 139
MS.gene59333.t1 MTR_5g072840 26.860 484 295 17 7 477 10 447 8.80e-36 138
MS.gene59333.t1 MTR_8g071070 26.453 499 311 18 1 476 1 466 9.96e-36 139
MS.gene59333.t1 MTR_3g479470 26.163 516 294 18 3 477 9 478 1.18e-35 139
MS.gene59333.t1 MTR_6g013960 26.337 505 308 16 4 477 7 478 1.46e-35 138
MS.gene59333.t1 MTR_7g070910 26.602 515 292 22 4 474 8 480 1.48e-35 139
MS.gene59333.t1 MTR_4g082810 37.619 210 112 6 200 405 201 395 2.37e-35 136
MS.gene59333.t1 MTR_6g014187 25.146 513 320 13 4 485 7 486 2.92e-35 137
MS.gene59333.t1 MTR_2g034990 27.604 384 236 14 110 472 114 476 4.30e-35 137
MS.gene59333.t1 MTR_4g117950 29.471 397 206 17 110 474 104 458 4.76e-35 137
MS.gene59333.t1 MTR_0536s0010 26.148 501 268 23 17 474 31 472 5.97e-35 137
MS.gene59333.t1 MTR_7g070610 28.046 517 276 26 7 474 13 482 6.03e-35 137
MS.gene59333.t1 MTR_4g095008 33.740 246 135 6 241 474 231 460 7.50e-35 137
MS.gene59333.t1 MTR_3g079480 27.545 501 287 21 3 467 17 477 8.70e-35 136
MS.gene59333.t1 MTR_7g012120 31.081 296 168 9 206 479 209 490 1.06e-34 136
MS.gene59333.t1 MTR_1g107380 29.967 307 173 10 185 477 193 471 1.13e-34 135
MS.gene59333.t1 MTR_6g014190 34.272 213 118 3 265 477 95 285 1.23e-34 132
MS.gene59333.t1 MTR_0477s0010 35.211 213 116 3 265 477 125 315 1.28e-34 132
MS.gene59333.t1 MTR_4g118000 29.682 283 167 9 211 477 199 465 1.32e-34 135
MS.gene59333.t1 MTR_6g035265 27.638 398 224 14 110 477 109 472 1.33e-34 135
MS.gene59333.t1 MTR_3g479610 30.000 280 154 8 211 477 61 311 1.36e-34 132
MS.gene59333.t1 MTR_5g072820 26.749 486 295 17 6 477 9 447 1.42e-34 135
MS.gene59333.t1 MTR_7g067120 35.565 239 115 8 235 461 202 413 1.50e-34 134
MS.gene59333.t1 MTR_2g035040 30.124 322 181 12 181 472 74 381 1.59e-34 134
MS.gene59333.t1 MTR_7g013260 30.357 280 155 9 185 457 176 422 2.77e-34 134
MS.gene59333.t1 MTR_7g013180 26.947 475 291 16 7 464 5 440 3.61e-34 134
MS.gene59333.t1 MTR_7g067330 35.146 239 118 8 228 461 207 413 3.75e-34 134
MS.gene59333.t1 MTR_6g014240 26.706 513 286 18 1 485 1 451 4.03e-34 134
MS.gene59333.t1 MTR_5g072810 24.641 487 307 13 6 477 11 452 4.11e-34 134
MS.gene59333.t1 MTR_7g470610 35.897 234 115 7 211 431 74 285 5.10e-34 130
MS.gene59333.t1 MTR_7g070583 35.897 234 115 7 211 431 74 285 5.10e-34 130
MS.gene59333.t1 MTR_7g013200 33.175 211 117 6 244 452 228 416 5.36e-34 133
MS.gene59333.t1 MTR_4g485620 27.848 395 239 9 109 484 93 460 6.17e-34 133
MS.gene59333.t1 MTR_8g007585 34.579 214 118 3 264 477 199 390 7.22e-34 132
MS.gene59333.t1 MTR_6g011340 30.208 288 162 8 200 477 220 478 7.34e-34 134
MS.gene59333.t1 MTR_8g006230 35.323 201 123 3 116 315 55 249 8.73e-34 129
MS.gene59333.t1 MTR_6g014150 32.743 226 130 3 259 484 279 482 9.26e-34 133
MS.gene59333.t1 MTR_8g088560 26.939 490 298 17 7 476 10 459 1.18e-33 132
MS.gene59333.t1 MTR_7g080900 25.662 491 289 15 3 469 8 446 1.73e-33 132
MS.gene59333.t1 MTR_5g072860 25.615 488 285 14 7 467 18 454 3.15e-33 131
MS.gene59333.t1 MTR_5g016660 26.181 508 287 18 5 467 8 472 4.27e-33 131
MS.gene59333.t1 MTR_5g027210 31.225 253 151 3 205 442 206 450 5.33e-33 131
MS.gene59333.t1 MTR_4g123553 28.024 496 232 20 7 452 15 435 5.52e-33 130
MS.gene59333.t1 MTR_7g117405 26.761 497 309 17 7 477 12 479 8.36e-33 130
MS.gene59333.t1 MTR_7g071050 33.921 227 125 4 248 464 214 425 1.38e-32 129
MS.gene59333.t1 MTR_6g035295 25.641 507 298 18 18 484 23 490 1.70e-32 130
MS.gene59333.t1 MTR_8g044140 35.798 257 133 10 242 481 210 451 2.32e-32 129
MS.gene59333.t1 MTR_3g084540 26.285 506 309 16 2 477 1 472 2.34e-32 129
MS.gene59333.t1 MTR_5g016480 24.400 500 317 17 4 477 5 469 2.76e-32 129
MS.gene59333.t1 MTR_3g069690 26.585 489 295 17 3 474 4 445 3.23e-32 129
MS.gene59333.t1 MTR_7g070870 31.868 273 153 7 185 445 196 447 3.84e-32 128
MS.gene59333.t1 MTR_7g013220 25.966 466 282 18 7 452 5 427 4.67e-32 128
MS.gene59333.t1 MTR_5g090690 32.364 275 142 9 114 383 70 305 6.20e-32 126
MS.gene59333.t1 MTR_5g031830 30.479 397 206 17 100 467 104 459 7.30e-32 128
MS.gene59333.t1 MTR_6g078320 25.049 511 308 15 6 480 10 481 8.20e-32 128
MS.gene59333.t1 MTR_5g029800 26.904 394 247 13 109 479 109 484 8.79e-32 127
MS.gene59333.t1 MTR_8g043470 31.818 220 128 3 265 484 186 383 1.27e-31 125
MS.gene59333.t1 MTR_2g059240 26.726 449 249 19 7 423 13 413 1.40e-31 127
MS.gene59333.t1 MTR_8g007565 25.572 481 287 17 1 452 1 439 1.55e-31 127
MS.gene59333.t1 MTR_4g117980 30.389 283 176 8 207 477 207 480 1.99e-31 127
MS.gene59333.t1 MTR_7g080935 25.151 497 286 15 1 469 5 443 2.30e-31 126
MS.gene59333.t1 MTR_8g083280 31.227 269 153 5 212 477 221 460 2.95e-31 126
MS.gene59333.t1 MTR_8g007650 25.572 481 287 17 1 452 1 439 4.50e-31 125
MS.gene59333.t1 MTR_2g035020 30.175 285 167 11 206 472 206 476 4.62e-31 125
MS.gene59333.t1 MTR_5g066410 34.914 232 121 7 233 452 202 415 4.75e-31 125
MS.gene59333.t1 MTR_7g102520 33.977 259 133 7 242 477 244 487 5.73e-31 125
MS.gene59333.t1 MTR_1g040310 33.725 255 135 8 244 481 249 486 6.42e-31 125
MS.gene59333.t1 MTR_7g080940 24.644 491 296 14 1 469 5 443 6.62e-31 125
MS.gene59333.t1 MTR_5g004940 33.478 230 108 6 244 448 182 391 6.67e-31 124
MS.gene59333.t1 MTR_4g077960 34.274 248 135 6 239 481 213 437 7.14e-31 124
MS.gene59333.t1 MTR_2g008220 33.074 257 142 6 201 452 208 439 7.18e-31 125
MS.gene59333.t1 MTR_7g102450 31.579 285 159 6 211 477 204 470 7.36e-31 125
MS.gene59333.t1 MTR_7g102560 31.488 289 156 8 211 477 214 482 8.41e-31 125
MS.gene59333.t1 MTR_6g042310 27.500 480 274 15 7 461 18 448 8.49e-31 124
MS.gene59333.t1 MTR_5g040030 26.786 504 297 21 18 484 25 493 1.09e-30 125
MS.gene59333.t1 MTR_8g068340 37.156 218 113 5 242 454 246 444 1.22e-30 124
MS.gene59333.t1 MTR_6g014300 25.394 508 301 17 3 480 8 467 2.03e-30 124
MS.gene59333.t1 MTR_3g084530 26.758 512 298 17 2 477 1 471 2.61e-30 123
MS.gene59333.t1 MTR_5g031840 32.031 256 128 10 200 442 204 426 2.77e-30 123
MS.gene59333.t1 MTR_8g068330 31.210 314 164 9 170 454 150 440 2.79e-30 123
MS.gene59333.t1 MTR_5g031860 26.477 491 287 18 7 467 12 458 3.74e-30 123
MS.gene59333.t1 MTR_8g068360 27.236 492 254 18 7 454 12 443 4.21e-30 122
MS.gene59333.t1 MTR_3g031400 25.157 477 287 14 6 467 17 438 6.10e-30 122
MS.gene59333.t1 MTR_2g008226 26.844 488 262 18 7 452 10 444 1.13e-29 121
MS.gene59333.t1 MTR_2g008225 35.484 217 116 5 241 452 243 440 1.70e-29 121
MS.gene59333.t1 MTR_3g031450 24.255 470 302 13 6 467 17 440 1.74e-29 121
MS.gene59333.t1 MTR_2086s0010 32.000 200 112 5 287 486 1 176 1.80e-29 114
MS.gene59333.t1 MTR_1996s0010 32.000 200 112 5 287 486 1 176 1.80e-29 114
MS.gene59333.t1 MTR_5g067170 25.156 481 314 12 14 472 18 474 1.82e-29 121
MS.gene59333.t1 MTR_7g039550 34.274 248 134 6 240 474 26 257 2.20e-29 117
MS.gene59333.t1 MTR_2g046620 34.498 229 125 6 239 461 237 446 7.53e-29 119
MS.gene59333.t1 MTR_8g032950 32.018 228 136 5 260 477 261 479 8.12e-29 119
MS.gene59333.t1 MTR_3g084520 24.852 507 314 16 2 477 1 471 8.34e-29 119
MS.gene59333.t1 MTR_5g075440 22.833 473 291 12 6 455 9 430 9.37e-29 119
MS.gene59333.t1 MTR_5g039900 34.188 234 127 6 250 474 264 479 5.23e-28 117
MS.gene59333.t1 MTR_7g070760 33.019 212 91 5 211 414 32 200 2.93e-27 108
MS.gene59333.t1 MTR_7g080950 28.364 275 166 8 206 474 194 443 5.33e-27 113
MS.gene59333.t1 MTR_6g036650 26.552 467 283 17 7 452 18 445 1.02e-26 113
MS.gene59333.t1 MTR_3g435310 34.314 204 111 5 253 452 210 394 1.16e-26 112
MS.gene59333.t1 MTR_4g059370 34.783 184 105 3 267 447 190 361 3.45e-25 107
MS.gene59333.t1 MTR_5g090650 24.796 367 217 11 4 360 2 319 5.82e-25 105
MS.gene59333.t1 MTR_1g090270 34.010 197 115 4 246 442 245 426 1.17e-23 103
MS.gene59333.t1 MTR_6g014185 28.571 273 136 10 210 477 125 343 2.98e-23 101
MS.gene59333.t1 MTR_8g056740 24.409 381 218 13 109 487 49 361 4.32e-23 101
MS.gene59333.t1 MTR_4g079250 31.188 202 118 4 259 455 248 433 2.26e-22 100
MS.gene59333.t1 MTR_5g098960 33.971 209 104 7 212 414 212 392 3.56e-22 99.4
MS.gene59333.t1 MTR_1g107325 31.176 170 109 3 309 477 189 351 3.62e-22 98.2
MS.gene59333.t1 MTR_4g079270 29.864 221 122 5 240 455 241 433 5.79e-22 99.0
MS.gene59333.t1 MTR_2g014900 29.237 236 142 5 208 443 208 418 2.45e-21 97.1
MS.gene59333.t1 MTR_5g066390 35.811 148 86 3 330 477 75 213 4.16e-21 92.0
MS.gene59333.t1 MTR_6g014000 37.963 108 61 1 352 459 35 136 1.50e-20 94.7
MS.gene59333.t1 MTR_5g072850 31.176 170 85 4 241 405 183 325 5.95e-20 92.0
MS.gene59333.t1 MTR_6g014160 27.381 252 116 9 200 441 202 396 1.97e-19 90.5
MS.gene59333.t1 MTR_7g070995 34.646 127 75 2 349 467 7 133 4.72e-19 84.7
MS.gene59333.t1 MTR_2g083430 31.507 219 123 5 234 449 233 427 1.21e-18 89.0
MS.gene59333.t1 MTR_0536s0030 33.987 153 89 5 336 477 199 350 1.90e-18 87.4
MS.gene59333.t1 MTR_2g083380 33.333 219 119 6 234 449 250 444 5.41e-18 87.0
MS.gene59333.t1 MTR_2g083480 31.416 226 128 6 233 455 232 433 2.27e-17 84.7
MS.gene59333.t1 MTR_1g090280 30.769 156 96 2 287 442 133 276 4.23e-17 82.4
MS.gene59333.t1 MTR_6g052375 29.493 217 120 6 148 360 7 194 5.85e-17 82.4
MS.gene59333.t1 MTR_2g083490 33.333 219 119 6 234 449 233 427 4.96e-16 80.9
MS.gene59333.t1 MTR_0184s0010 43.750 96 52 1 386 481 4 97 1.06e-15 73.2
MS.gene59333.t1 MTR_2g083420 28.309 272 134 8 199 455 184 409 1.32e-15 79.3
MS.gene59333.t1 MTR_2g083390 34.400 125 80 2 332 455 286 409 2.79e-14 75.1
MS.gene59333.t1 MTR_2g086283 28.108 185 95 4 297 476 186 337 1.37e-11 66.2
MS.gene59333.t1 MTR_0475s0030 37.143 70 38 1 365 434 11 74 1.67e-11 61.2
MS.gene59333.t1 MTR_3g009500 26.937 271 167 11 5 258 3 259 2.04e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59333.t1 AT3G50740 46.761 494 247 9 5 493 5 487 1.97e-156 454
MS.gene59333.t1 AT5G66690 45.455 484 245 8 5 484 5 473 6.01e-150 437
MS.gene59333.t1 AT5G26310 43.892 483 250 8 5 482 5 471 2.54e-146 428
MS.gene59333.t1 AT2G18570 42.767 477 257 7 7 480 5 468 5.26e-126 375
MS.gene59333.t1 AT4G36770 45.905 464 225 13 7 463 4 448 5.65e-126 375
MS.gene59333.t1 AT4G01070 40.966 476 263 8 3 475 4 464 4.44e-113 343
MS.gene59333.t1 AT1G01420 41.314 472 258 8 7 475 11 466 8.54e-109 332
MS.gene59333.t1 AT1G01420 41.314 472 258 8 7 475 8 463 1.14e-108 331
MS.gene59333.t1 AT1G01390 42.888 464 242 10 7 462 8 456 1.21e-106 326
MS.gene59333.t1 AT1G01390 42.888 464 242 10 7 462 25 473 2.58e-106 326
MS.gene59333.t1 AT2G18560 42.526 388 211 4 95 480 1 378 5.64e-103 313
MS.gene59333.t1 AT3G16520 29.936 471 307 6 9 476 7 457 1.07e-66 222
MS.gene59333.t1 AT3G21750 31.864 499 281 12 5 477 2 467 1.98e-66 221
MS.gene59333.t1 AT4G15280 32.787 488 296 10 5 477 2 472 1.99e-66 222
MS.gene59333.t1 AT3G21760 32.122 523 260 18 5 477 2 479 2.51e-66 221
MS.gene59333.t1 AT4G15280 32.787 488 296 10 5 477 34 504 3.08e-66 222
MS.gene59333.t1 AT3G16520 30.717 446 285 6 9 447 7 435 1.23e-65 219
MS.gene59333.t1 AT3G16520 30.717 446 285 6 9 447 7 435 1.36e-65 219
MS.gene59333.t1 AT3G21790 31.737 501 289 14 5 477 2 477 3.79e-65 219
MS.gene59333.t1 AT3G21800 31.907 514 279 19 4 482 2 479 6.09e-64 215
MS.gene59333.t1 AT1G07250 31.653 496 272 16 4 468 3 462 6.33e-64 215
MS.gene59333.t1 AT1G07260 32.577 485 269 13 9 467 8 460 2.83e-62 211
MS.gene59333.t1 AT2G29740 32.207 503 258 18 4 467 5 463 1.34e-61 209
MS.gene59333.t1 AT4G01070 37.644 348 201 7 3 347 4 338 2.63e-61 204
MS.gene59333.t1 AT2G29750 31.352 488 270 16 4 461 5 457 1.64e-60 206
MS.gene59333.t1 AT3G21780 32.064 499 280 18 5 477 2 467 1.66e-59 203
MS.gene59333.t1 AT1G07240 32.465 499 276 17 9 477 7 474 6.94e-59 202
MS.gene59333.t1 AT4G15260 34.865 370 212 7 120 477 1 353 7.06e-59 198
MS.gene59333.t1 AT2G29710 30.847 496 285 15 4 477 2 461 2.53e-58 200
MS.gene59333.t1 AT2G29730 29.006 493 298 13 4 477 2 461 5.14e-58 199
MS.gene59333.t1 AT2G15480 28.514 498 311 10 2 477 5 479 7.99e-54 188
MS.gene59333.t1 AT2G15490 29.482 502 303 13 1 477 1 476 2.52e-53 187
MS.gene59333.t1 AT2G15480 28.346 508 309 11 2 477 5 489 6.41e-53 186
MS.gene59333.t1 AT2G15490 29.681 502 305 14 1 477 1 479 2.67e-52 184
MS.gene59333.t1 AT2G16890 30.801 487 259 15 7 461 9 449 5.13e-52 183
MS.gene59333.t1 AT4G34131 28.460 513 278 15 4 472 7 474 8.97e-50 177
MS.gene59333.t1 AT5G59580 29.701 468 286 12 5 467 7 436 2.35e-48 173
MS.gene59333.t1 AT5G59590 29.053 475 291 12 4 471 7 442 5.63e-48 172
MS.gene59333.t1 AT2G31790 29.472 492 284 16 3 474 4 452 1.27e-47 171
MS.gene59333.t1 AT1G24100 30.041 486 292 12 5 476 9 460 1.00e-46 169
MS.gene59333.t1 AT1G78270 29.472 492 274 16 3 460 9 461 3.37e-46 168
MS.gene59333.t1 AT5G12890 29.630 513 282 20 9 479 12 487 3.98e-46 167
MS.gene59333.t1 AT1G22400 29.555 494 272 20 3 460 9 462 4.86e-46 167
MS.gene59333.t1 AT2G16890 30.087 462 245 15 7 436 9 424 5.16e-46 166
MS.gene59333.t1 AT1G22360 29.216 510 280 19 2 471 5 473 5.43e-46 167
MS.gene59333.t1 AT5G14860 28.180 511 301 18 2 479 3 480 2.60e-45 166
MS.gene59333.t1 AT3G46690 28.423 482 296 15 4 476 6 447 8.25e-45 163
MS.gene59333.t1 AT1G10400 29.058 499 294 16 1 477 1 461 8.81e-45 164
MS.gene59333.t1 AT1G22340 27.935 494 280 18 3 460 9 462 7.62e-44 161
MS.gene59333.t1 AT4G34135 28.694 467 268 15 4 438 8 441 1.35e-43 160
MS.gene59333.t1 AT5G03490 29.681 502 275 20 3 479 15 463 1.63e-43 160
MS.gene59333.t1 AT3G46700 27.743 483 293 16 4 476 6 442 2.16e-43 159
MS.gene59333.t1 AT2G36800 26.499 517 309 15 1 477 1 486 2.86e-43 160
MS.gene59333.t1 AT1G05675 27.273 484 305 10 2 474 1 448 3.51e-43 159
MS.gene59333.t1 AT1G05680 28.163 490 293 11 2 474 1 448 3.69e-43 159
MS.gene59333.t1 AT1G51210 28.814 472 258 17 3 452 16 431 5.38e-43 158
MS.gene59333.t1 AT2G36970 25.255 491 304 13 3 467 6 459 6.41e-43 159
MS.gene59333.t1 AT2G36770 27.115 520 303 18 1 477 1 487 9.85e-43 159
MS.gene59333.t1 AT1G22380 28.313 498 270 17 4 460 10 461 1.31e-42 158
MS.gene59333.t1 AT2G36760 28.231 503 300 17 7 477 14 487 1.43e-42 158
MS.gene59333.t1 AT3G46680 28.482 481 297 16 2 474 4 445 1.46e-42 157
MS.gene59333.t1 AT3G53160 28.070 513 288 17 7 477 8 481 1.90e-42 157
MS.gene59333.t1 AT4G34138 34.859 284 145 7 211 480 223 480 2.25e-42 157
MS.gene59333.t1 AT5G17050 26.819 481 297 13 3 469 8 447 2.92e-42 156
MS.gene59333.t1 AT2G43840 28.039 510 267 17 1 474 1 446 2.86e-41 154
MS.gene59333.t1 AT2G43840 27.843 510 268 17 1 474 1 446 1.59e-40 151
MS.gene59333.t1 AT3G46660 28.512 484 288 15 5 474 12 451 3.13e-40 151
MS.gene59333.t1 AT2G36780 26.782 519 306 18 1 477 1 487 4.87e-40 151
MS.gene59333.t1 AT1G22360 28.039 510 274 19 2 471 5 461 1.25e-39 149
MS.gene59333.t1 AT1G30530 27.484 473 287 14 8 469 14 441 3.30e-39 148
MS.gene59333.t1 AT2G36750 26.810 511 296 19 7 477 10 482 6.03e-39 148
MS.gene59333.t1 AT2G30140 27.708 480 301 11 3 476 9 448 2.31e-38 145
MS.gene59333.t1 AT2G30140 27.651 481 301 11 3 476 9 449 4.11e-38 145
MS.gene59333.t1 AT2G36790 27.600 500 307 13 7 477 13 486 8.52e-38 145
MS.gene59333.t1 AT2G43820 27.475 495 273 17 1 468 1 436 1.11e-37 144
MS.gene59333.t1 AT3G46650 29.451 455 252 19 5 449 8 403 1.19e-37 143
MS.gene59333.t1 AT3G46720 26.955 486 297 15 3 479 5 441 2.97e-37 142
MS.gene59333.t1 AT1G22370 29.240 513 275 19 4 477 10 473 1.07e-36 141
MS.gene59333.t1 AT5G17030 26.392 485 293 17 3 469 8 446 1.33e-36 141
MS.gene59333.t1 AT3G46670 27.593 482 285 15 9 474 11 444 1.35e-36 140
MS.gene59333.t1 AT5G05880 33.891 239 134 5 239 474 227 444 5.43e-36 139
MS.gene59333.t1 AT3G11340 32.028 281 161 6 197 474 187 440 1.04e-35 138
MS.gene59333.t1 AT3G21560 25.151 497 307 16 7 476 12 470 1.29e-35 139
MS.gene59333.t1 AT3G53150 27.324 527 295 21 3 477 18 508 1.45e-35 139
MS.gene59333.t1 AT2G28080 31.786 280 157 8 195 470 213 462 2.76e-35 137
MS.gene59333.t1 AT3G55700 26.526 475 302 12 9 474 10 446 4.35e-35 137
MS.gene59333.t1 AT4G15490 25.703 498 293 15 3 468 4 456 6.42e-35 136
MS.gene59333.t1 AT1G73880 26.708 483 295 16 5 467 12 455 2.15e-34 135
MS.gene59333.t1 AT5G17040 28.135 327 195 9 150 469 35 328 2.21e-34 132
MS.gene59333.t1 AT5G65550 34.252 254 139 6 212 462 220 448 3.77e-34 134
MS.gene59333.t1 AT2G30150 26.694 487 293 15 7 477 13 451 4.12e-34 134
MS.gene59333.t1 AT1G05560 26.884 491 294 17 7 477 5 450 6.10e-34 134
MS.gene59333.t1 AT5G17040 25.826 484 282 15 6 469 4 430 6.26e-34 133
MS.gene59333.t1 AT1G05560 26.884 491 294 17 7 477 55 500 1.19e-33 134
MS.gene59333.t1 AT2G26480 33.333 237 136 3 241 474 224 441 1.23e-33 132
MS.gene59333.t1 AT2G31750 26.733 505 293 18 5 481 6 461 1.93e-33 132
MS.gene59333.t1 AT2G23260 26.869 495 292 16 4 477 7 452 3.46e-33 131
MS.gene59333.t1 AT1G22370 34.050 279 143 6 211 477 54 303 4.26e-33 128
MS.gene59333.t1 AT5G05870 31.461 267 154 6 211 474 210 450 4.37e-33 131
MS.gene59333.t1 AT2G30150 26.667 480 288 15 14 477 4 435 4.84e-33 130
MS.gene59333.t1 AT2G31750 26.518 494 290 17 5 474 6 450 1.10e-32 130
MS.gene59333.t1 AT4G15480 25.474 475 318 11 7 469 19 469 1.14e-32 130
MS.gene59333.t1 AT4G15550 26.667 480 303 16 7 467 13 462 2.04e-32 129
MS.gene59333.t1 AT5G49690 31.068 309 150 9 187 469 168 439 7.96e-32 127
MS.gene59333.t1 AT1G05530 27.515 487 297 18 7 476 5 452 2.09e-31 126
MS.gene59333.t1 AT3G55710 32.963 270 149 7 211 474 207 450 4.79e-31 125
MS.gene59333.t1 AT5G38010 23.684 494 307 13 4 476 7 451 9.45e-31 124
MS.gene59333.t1 AT5G05860 32.281 285 160 8 194 475 190 444 1.03e-30 124
MS.gene59333.t1 AT4G15500 23.279 494 307 13 1 467 3 451 1.70e-30 124
MS.gene59333.t1 AT5G38040 29.889 271 161 4 208 476 204 447 3.77e-30 122
MS.gene59333.t1 AT2G23250 31.183 279 151 7 209 477 187 434 9.42e-30 121
MS.gene59333.t1 AT1G06000 25.400 500 281 18 3 480 6 435 1.11e-29 121
MS.gene59333.t1 AT5G05890 32.857 210 121 3 265 474 259 448 1.56e-29 121
MS.gene59333.t1 AT4G14090 25.880 483 293 16 4 468 10 445 2.23e-29 120
MS.gene59333.t1 AT5G05900 25.880 483 304 12 3 474 4 443 7.41e-29 119
MS.gene59333.t1 AT2G22590 25.207 484 278 13 5 454 13 446 1.42e-27 115
MS.gene59333.t1 AT4G27570 30.672 238 141 4 201 438 192 405 1.57e-25 109
MS.gene59333.t1 AT3G02100 30.717 293 142 10 195 474 211 455 2.52e-25 108
MS.gene59333.t1 AT4G27560 29.528 254 155 4 201 454 192 421 6.99e-25 107
MS.gene59333.t1 AT5G54010 24.434 442 292 13 2 438 1 405 2.41e-24 105
MS.gene59333.t1 AT1G64910 30.469 256 149 6 206 456 191 422 1.61e-23 103
MS.gene59333.t1 AT5G53990 29.752 242 146 4 197 438 182 399 4.71e-23 102
MS.gene59333.t1 AT1G64920 23.404 470 294 13 2 455 1 420 2.86e-21 96.7
MS.gene59333.t1 AT5G37950 27.465 284 169 8 114 390 84 337 3.45e-21 95.1
MS.gene59333.t1 AT3G29630 23.673 490 321 14 2 483 1 445 4.05e-21 96.3
MS.gene59333.t1 AT2G22930 25.524 286 187 5 197 482 182 441 1.42e-20 94.7
MS.gene59333.t1 AT5G37950 27.304 293 164 10 114 390 84 343 1.44e-20 93.6
MS.gene59333.t1 AT3G22250 29.327 208 116 5 259 462 268 448 1.98e-20 94.4
MS.gene59333.t1 AT1G50580 24.781 456 277 17 2 442 1 405 3.47e-20 93.6
MS.gene59333.t1 AT4G09500 23.210 461 296 12 5 455 4 416 1.17e-19 91.7
MS.gene59333.t1 AT3G29630 29.358 218 137 4 266 483 219 419 3.00e-18 87.4
MS.gene59333.t1 AT5G54060 28.992 238 149 6 241 477 243 461 4.40e-18 87.0
MS.gene59333.t1 AT4G09500 30.769 182 110 3 274 455 226 391 1.17e-17 85.5
MS.gene59333.t1 AT2G16890 26.220 328 188 12 7 305 9 311 6.69e-15 75.9
MS.gene59333.t1 AT2G16890 26.220 328 188 12 7 305 9 311 6.69e-15 75.9
MS.gene59333.t1 AT4G34135 24.699 332 215 11 4 312 8 327 6.54e-13 70.1

Find 156 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACCGCTTTCGATTCT+TGG 0.115382 5.4:+11846445 MS.gene59333:CDS
ATTAACCGTTGATGGGATTT+TGG 0.180078 5.4:+11846561 MS.gene59333:CDS
TGAGTCAGCAACGGTTTATT+TGG 0.201346 5.4:+11846845 MS.gene59333:CDS
ACTAAGGCGGTTATTGAAAA+TGG 0.203582 5.4:+11846616 MS.gene59333:CDS
CTAATTCAATGGTGGGAATT+AGG 0.215918 5.4:-11845997 None:intergenic
ACAATGATGTCAAGGCTATT+AGG 0.244972 5.4:-11846130 None:intergenic
CGGATGGTGGTGTTGTTTGT+AGG 0.276202 5.4:+11847202 MS.gene59333:CDS
AATCCTAAGGATGGATTGTT+TGG 0.293527 5.4:-11846187 None:intergenic
AGTTAAAGTTAAGGAGTATA+AGG 0.296600 5.4:+11847284 MS.gene59333:CDS
TGGATTTGAGAGCGAATAAA+AGG 0.300314 5.4:-11846241 None:intergenic
TGCACCCGCAACGTTGAAAA+AGG 0.312464 5.4:-11846905 None:intergenic
CTAATTCCCACCATTGAATT+AGG 0.314775 5.4:+11845998 MS.gene59333:CDS
TGAAACATTTGTTGCACCTT+GGG 0.317017 5.4:+11846498 MS.gene59333:CDS
AGATGGTTACATCGAAATTA+TGG 0.337543 5.4:-11846039 None:intergenic
GTTCTTATCGTGGATATCTT+TGG 0.337565 5.4:+11846286 MS.gene59333:CDS
CAGATGAGGGAGTTGGCTTA+TGG 0.341159 5.4:+11846814 MS.gene59333:CDS
CAATGATGTCAAGGCTATTA+GGG 0.354503 5.4:-11846129 None:intergenic
TGCTTAAGCACCCCGAGCTT+TGG 0.361718 5.4:-11847406 None:intergenic
CTAAGGCGGTTATTGAAAAT+GGG 0.367692 5.4:+11846617 MS.gene59333:CDS
GAGGGAGTTGGCTTATGGTT+TGG 0.368083 5.4:+11846819 MS.gene59333:CDS
TGCAGATGCACCGTCCTTTG+TGG 0.371351 5.4:-11846881 None:intergenic
GGTGAACACGTGGCAAGATC+TGG 0.384639 5.4:+11846582 MS.gene59333:CDS
AGGGAAATATTAACCGTTGA+TGG 0.384981 5.4:+11846553 MS.gene59333:CDS
TCGGTGATATATTTGTCATT+TGG 0.385609 5.4:+11846766 MS.gene59333:CDS
GAGCTTTGGCCTCAGATCCT+TGG 0.403332 5.4:-11847392 None:intergenic
CCATGCCAGGACTGGCTAGA+AGG 0.405790 5.4:-11845970 None:intergenic
ATTACAAATTGTTCTAATCA+TGG 0.407329 5.4:+11846207 MS.gene59333:CDS
TTCGATTCTTGGTTGTGAAT+CGG 0.408803 5.4:+11846456 MS.gene59333:CDS
AACAGATGGAGGATTCTTCA+TGG 0.417822 5.4:-11846266 None:intergenic
GAGTCAGCAACGGTTTATTT+GGG 0.419333 5.4:+11846846 MS.gene59333:CDS
GCAGATGCACCGTCCTTTGT+GGG 0.423334 5.4:-11846880 None:intergenic
GATGAATGCAACTATGTTAT+CGG 0.427158 5.4:+11847140 MS.gene59333:CDS
ATGGAGGATTCTTCATGGAT+TGG 0.429228 5.4:-11846261 None:intergenic
TTGTGAATCGGTTCGATTTG+AGG 0.433122 5.4:+11846468 MS.gene59333:CDS
AGGATCTGAGGCCAAAGCTC+GGG 0.439111 5.4:+11847395 MS.gene59333:CDS
GTTAAGGAGTATAAGGTAAG+TGG 0.440214 5.4:+11847291 MS.gene59333:CDS
GAGTTGGCTTGACCGACAAC+CGG 0.446934 5.4:+11846738 MS.gene59333:CDS
TAATGAAATGCTCTCTAAGA+TGG 0.452108 5.4:+11847344 MS.gene59333:CDS
GTTTCAATATCTCAGCTTGT+GGG 0.455969 5.4:-11847011 None:intergenic
ATCCTAAGGATGGATTGTTT+GGG 0.456888 5.4:-11846186 None:intergenic
TTGAAACATTTGTTGCACCT+TGG 0.462520 5.4:+11846497 MS.gene59333:CDS
CCTTCTAGCCAGTCCTGGCA+TGG 0.466820 5.4:+11845970 MS.gene59333:CDS
TCTGGAGCCAACAGCTACTA+AGG 0.469308 5.4:+11846600 MS.gene59333:CDS
AAGCCGTTTGCCTAATTCAA+TGG 0.470985 5.4:-11846008 None:intergenic
TCACTCTCACCATCCTTCTC+CGG 0.471841 5.4:-11846703 None:intergenic
GGATGGTGGTGTTGTTTGTA+GGG 0.472095 5.4:+11847203 MS.gene59333:CDS
AACTATGAGAGTTAAAGTTA+AGG 0.480148 5.4:+11847275 MS.gene59333:CDS
TTCAACGTTGCGGGTGCAGA+TGG 0.481701 5.4:+11846910 MS.gene59333:CDS
CTCAGCTTGTGGGGACCACA+TGG 0.482684 5.4:-11847001 None:intergenic
TAGAACAATTTGTAATCCTA+AGG 0.487043 5.4:-11846200 None:intergenic
GTGTTGGAGAGTATTCTTAA+CGG 0.492493 5.4:+11847078 MS.gene59333:CDS
AAAGGACCGGTTTATCCGAT+TGG 0.495178 5.4:+11846658 MS.gene59333:CDS
TCACCGACTCAGCCGGTTGT+CGG 0.496119 5.4:-11846750 None:intergenic
GTCACAAAACCACCCGTTGA+AGG 0.497281 5.4:-11847036 None:intergenic
AGCGGTCCAATCGGATAAAC+CGG 0.497350 5.4:-11846664 None:intergenic
CTTTGGCCTCAGATCCTTGG+TGG 0.497610 5.4:-11847389 None:intergenic
GCTAGTAAGAACTGATGAAC+CGG 0.498920 5.4:+11846684 MS.gene59333:CDS
ACAATTTGTAATCCTAAGGA+TGG 0.503809 5.4:-11846196 None:intergenic
GACCCAAACAATCCATCCTT+AGG 0.507362 5.4:+11846184 MS.gene59333:CDS
GCAGTCCTTCTAGCCAGTCC+TGG 0.507678 5.4:+11845965 MS.gene59333:CDS
TATTTGTCATTTGGAAGTGG+TGG 0.510421 5.4:+11846775 MS.gene59333:CDS
GGAATTAGGTGTCCCATGCC+AGG 0.512529 5.4:-11845983 None:intergenic
TAGGTGTCCCATGCCAGGAC+TGG 0.514601 5.4:-11845978 None:intergenic
AAGGTGCAACAAATGTTTCA+AGG 0.516516 5.4:-11846495 None:intergenic
ATATTGAAACATCCTTCAAC+GGG 0.517633 5.4:+11847024 MS.gene59333:CDS
CATGTGCAACTCACGTGCCA+TGG 0.520206 5.4:-11846323 None:intergenic
CCACCATTGAATTAGGCAAA+CGG 0.521641 5.4:+11846005 MS.gene59333:CDS
TAAAGCGGCCATGCAACCAT+TGG 0.524368 5.4:-11847105 None:intergenic
GGGAAATATTAACCGTTGAT+GGG 0.526221 5.4:+11846554 MS.gene59333:CDS
TGGAAAGTTTGTGAAAGGAC+CGG 0.526779 5.4:+11846645 MS.gene59333:CDS
TGAATAGGACAAAAGAGGTA+GGG 0.527801 5.4:+11846968 MS.gene59333:CDS
ATATATTTGTCATTTGGAAG+TGG 0.528208 5.4:+11846772 MS.gene59333:CDS
TTGAATAGGACAAAAGAGGT+AGG 0.532740 5.4:+11846967 MS.gene59333:CDS
GGTTTATTTGGGTGGTGCGG+CGG 0.532815 5.4:+11846857 MS.gene59333:CDS
GGTGGTGCGGCGGCCCACAA+AGG 0.539696 5.4:+11846867 MS.gene59333:CDS
GGTTGCATGGCCGCTTTATG+CGG 0.540416 5.4:+11847110 MS.gene59333:CDS
ATTTGTCATTTGGAAGTGGT+GGG 0.540559 5.4:+11846776 MS.gene59333:CDS
TCAGCAACGGTTTATTTGGG+TGG 0.541389 5.4:+11846849 MS.gene59333:CDS
TATTCTTAACGGTGTTCCAA+TGG 0.546474 5.4:+11847089 MS.gene59333:CDS
TGTTTCAATATCTCAGCTTG+TGG 0.546693 5.4:-11847012 None:intergenic
GTTCTTACTAGCGGTCCAAT+CGG 0.553951 5.4:-11846673 None:intergenic
ACGGTGTTCCAATGGTTGCA+TGG 0.555117 5.4:+11847097 MS.gene59333:CDS
GATATTGAAACATCCTTCAA+CGG 0.555794 5.4:+11847023 MS.gene59333:CDS
CTTCATCTGTGATGAAAGGA+AGG 0.555836 5.4:-11846399 None:intergenic
CCTCATCTGACCTTCCGACA+TGG 0.556711 5.4:-11846800 None:intergenic
AACAGCAGTGAACCAAGCAT+TGG 0.558371 5.4:-11846368 None:intergenic
GCGGTTCATGATTCTTAGCA+TGG 0.558955 5.4:-11846432 None:intergenic
ATCTTCTGCTCCGCATAAAG+CGG 0.559382 5.4:-11847120 None:intergenic
AAATATATCACCGACTCAGC+CGG 0.559680 5.4:-11846757 None:intergenic
AAGGATCTGAGGCCAAAGCT+CGG 0.559727 5.4:+11847394 MS.gene59333:CDS
GAAAGCGACGACGACGGTGG+CGG 0.560684 5.4:+11847182 MS.gene59333:CDS
TGACCGACAACCGGCTGAGT+CGG 0.560705 5.4:+11846747 MS.gene59333:CDS
CGTTTGCCTAATTCAATGGT+GGG 0.562353 5.4:-11846004 None:intergenic
ACGACGACGGTGGCGGATGG+TGG 0.562597 5.4:+11847189 MS.gene59333:CDS
ATGTGCAACTCACGTGCCAT+GGG 0.563691 5.4:-11846322 None:intergenic
AAGAACTGATGAACCGGAGA+AGG 0.565607 5.4:+11846690 MS.gene59333:CDS
CCGTTTGCCTAATTCAATGG+TGG 0.566551 5.4:-11846005 None:intergenic
CTTCTAGCCAGTCCTGGCAT+GGG 0.570142 5.4:+11845971 MS.gene59333:CDS
TGACATCATTGTAACACCTC+CGG 0.570544 5.4:+11846141 MS.gene59333:CDS
AAAGCTTCATCTGTGATGAA+AGG 0.573302 5.4:-11846403 None:intergenic
AACGGTTTATTTGGGTGGTG+CGG 0.575641 5.4:+11846854 MS.gene59333:CDS
GCGACGACGACGGTGGCGGA+TGG 0.580167 5.4:+11847186 MS.gene59333:CDS
TCCTCCATCTGTTCTTATCG+TGG 0.582824 5.4:+11846276 MS.gene59333:CDS
GTGCGGCGGCCCACAAAGGA+CGG 0.584036 5.4:+11846871 MS.gene59333:CDS
GGAAGGTCAGATGAGGGAGT+TGG 0.585259 5.4:+11846807 MS.gene59333:CDS
TTGTGGTTGGAATTCTGTGT+TGG 0.585347 5.4:+11847062 MS.gene59333:CDS
GGCGGTTGTGACGACGAAGA+TGG 0.586383 5.4:-11846056 None:intergenic
TAAGGCGGTTATTGAAAATG+GGG 0.589730 5.4:+11846618 MS.gene59333:CDS
ATATCCACGATAAGAACAGA+TGG 0.592533 5.4:-11846280 None:intergenic
ATAACCGCCTTAGTAGCTGT+TGG 0.593391 5.4:-11846607 None:intergenic
AGGTGCAACAAATGTTTCAA+GGG 0.594651 5.4:-11846494 None:intergenic
TGGTGGATTACTTGCCAGAG+GGG 0.595312 5.4:+11846941 MS.gene59333:CDS
ATCGGAGGAGCTTGGTGTGG+CGG 0.599179 5.4:+11847158 MS.gene59333:CDS
TTATCTCCACCAAGGATCTG+AGG 0.601745 5.4:+11847383 MS.gene59333:CDS
AAAGTTACGTTGAAGTCACA+AGG 0.605910 5.4:+11846533 MS.gene59333:CDS
GGATCTGAGGCCAAAGCTCG+GGG 0.606430 5.4:+11847396 MS.gene59333:CDS
CCATGTCGGAAGGTCAGATG+AGG 0.606511 5.4:+11846800 MS.gene59333:CDS
TGGTTACATCGAAATTATGG+TGG 0.606712 5.4:-11846036 None:intergenic
AGTTTGTCAGAGACATCGAC+CGG 0.607258 5.4:-11846160 None:intergenic
GTTTGGAGCTGAGTCAGCAA+CGG 0.610581 5.4:+11846836 MS.gene59333:CDS
GGAGGTGATTAGAAAAGTGA+TGG 0.612701 5.4:+11847236 MS.gene59333:CDS
ACTGATGAACCGGAGAAGGA+TGG 0.614409 5.4:+11846694 MS.gene59333:CDS
GAAACATTTGTTGCACCTTG+GGG 0.615035 5.4:+11846499 MS.gene59333:CDS
TAGGGCTTTGTGTTCCCATG+TGG 0.616833 5.4:+11846986 MS.gene59333:CDS
AGTGGTGGGACCATGTCGGA+AGG 0.619154 5.4:+11846790 MS.gene59333:CDS
TTGAAACATCCTTCAACGGG+TGG 0.619390 5.4:+11847027 MS.gene59333:CDS
TGTGTCTGAATCTGAGGTGG+CGG 0.620102 5.4:-11846074 None:intergenic
GTGGTGGATTACTTGCCAGA+GGG 0.621097 5.4:+11846940 MS.gene59333:CDS
TTTCAATATCTCAGCTTGTG+GGG 0.623184 5.4:-11847010 None:intergenic
TGTTGTGTCTGAATCTGAGG+TGG 0.623450 5.4:-11846077 None:intergenic
TACATCGAAATTATGGTGGG+TGG 0.623457 5.4:-11846032 None:intergenic
ACTATGTTATCGGAGGAGCT+TGG 0.627208 5.4:+11847150 MS.gene59333:CDS
GGTTCATCAGTTCTTACTAG+CGG 0.632215 5.4:-11846682 None:intergenic
TTGTAGGGAAAAGATAGCGG+AGG 0.640226 5.4:+11847218 MS.gene59333:CDS
TGTTTGTAGGGAAAAGATAG+CGG 0.645616 5.4:+11847215 MS.gene59333:CDS
TCCACGATAAGAACAGATGG+AGG 0.646989 5.4:-11846277 None:intergenic
GAGGTGTTACAATGATGTCA+AGG 0.652183 5.4:-11846138 None:intergenic
GTTATCGGAGGAGCTTGGTG+TGG 0.652369 5.4:+11847155 MS.gene59333:CDS
GGTTACATCGAAATTATGGT+GGG 0.654277 5.4:-11846035 None:intergenic
GGTGATTAGAAAAGTGATGG+TGG 0.654775 5.4:+11847239 MS.gene59333:CDS
TGGAAGTGGTGGGACCATGT+CGG 0.656190 5.4:+11846786 MS.gene59333:CDS
GTTCACCAAAATCCCATCAA+CGG 0.668646 5.4:-11846566 None:intergenic
GAATGCAACTATGTTATCGG+AGG 0.669481 5.4:+11847143 MS.gene59333:CDS
TGTGGTGGATTACTTGCCAG+AGG 0.671123 5.4:+11846939 MS.gene59333:CDS
TGCAGATGGAACAACTGTGG+TGG 0.673467 5.4:+11846924 MS.gene59333:CDS
AAAGTGATGGTGGATGAAGA+AGG 0.677276 5.4:+11847249 MS.gene59333:CDS
TCAGCTTGTGGGGACCACAT+GGG 0.680652 5.4:-11847000 None:intergenic
CATGTCGGAAGGTCAGATGA+GGG 0.685191 5.4:+11846801 MS.gene59333:CDS
GGTGAAAGCGACGACGACGG+TGG 0.686396 5.4:+11847179 MS.gene59333:CDS
TGTGAACTTTATCTCCACCA+AGG 0.688348 5.4:+11847375 MS.gene59333:CDS
TTGTCAGAGACATCGACCGG+AGG 0.696013 5.4:-11846157 None:intergenic
GGCGGTGAAAGCGACGACGA+CGG 0.696378 5.4:+11847176 MS.gene59333:CDS
TCACAACCAAGAATCGAAAG+CGG 0.707337 5.4:-11846451 None:intergenic
AAGTTACGTTGAAGTCACAA+GGG 0.708644 5.4:+11846534 MS.gene59333:CDS
GGAGCCAACAGCTACTAAGG+CGG 0.734831 5.4:+11846603 MS.gene59333:CDS
GGGTGCAGATGGAACAACTG+TGG 0.777902 5.4:+11846921 MS.gene59333:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACAAATTGTTCTAATCA+TGG + chr5.4:11846207-11846226 MS.gene59333:CDS 20.0%
!!! GTGAAAATTTAATTTTGAGT+TGG + chr5.4:11846722-11846741 MS.gene59333:CDS 20.0%
! AACTATGAGAGTTAAAGTTA+AGG + chr5.4:11847275-11847294 MS.gene59333:CDS 25.0%
! TAGAACAATTTGTAATCCTA+AGG - chr5.4:11846203-11846222 None:intergenic 25.0%
!! AGTTAAAGTTAAGGAGTATA+AGG + chr5.4:11847284-11847303 MS.gene59333:CDS 25.0%
!! ATATATTTGTCATTTGGAAG+TGG + chr5.4:11846772-11846791 MS.gene59333:CDS 25.0%
!! TCAACGTAACTTTTATGAAT+AGG - chr5.4:11846526-11846545 None:intergenic 25.0%
ACAATTTGTAATCCTAAGGA+TGG - chr5.4:11846199-11846218 None:intergenic 30.0%
AGATGGTTACATCGAAATTA+TGG - chr5.4:11846042-11846061 None:intergenic 30.0%
ATATTGAAACATCCTTCAAC+GGG + chr5.4:11847024-11847043 MS.gene59333:CDS 30.0%
GATATTGAAACATCCTTCAA+CGG + chr5.4:11847023-11847042 MS.gene59333:CDS 30.0%
GATGAATGCAACTATGTTAT+CGG + chr5.4:11847140-11847159 MS.gene59333:CDS 30.0%
TCGGTGATATATTTGTCATT+TGG + chr5.4:11846766-11846785 MS.gene59333:CDS 30.0%
! GTTATTGAAAATGGGGTTTT+TGG + chr5.4:11846625-11846644 MS.gene59333:CDS 30.0%
! GTTTTTGAATAGGACAAAAG+AGG + chr5.4:11846963-11846982 MS.gene59333:CDS 30.0%
! TAATGAAATGCTCTCTAAGA+TGG + chr5.4:11847344-11847363 MS.gene59333:CDS 30.0%
!! GTTTTTGGAAAGTTTGTGAA+AGG + chr5.4:11846640-11846659 MS.gene59333:CDS 30.0%
AAAGCTTCATCTGTGATGAA+AGG - chr5.4:11846406-11846425 None:intergenic 35.0%
AAAGTTACGTTGAAGTCACA+AGG + chr5.4:11846533-11846552 MS.gene59333:CDS 35.0%
AAGGTGCAACAAATGTTTCA+AGG - chr5.4:11846498-11846517 None:intergenic 35.0%
AAGTTACGTTGAAGTCACAA+GGG + chr5.4:11846534-11846553 MS.gene59333:CDS 35.0%
ACAATGATGTCAAGGCTATT+AGG - chr5.4:11846133-11846152 None:intergenic 35.0%
ACTAAGGCGGTTATTGAAAA+TGG + chr5.4:11846616-11846635 MS.gene59333:CDS 35.0%
AGGGAAATATTAACCGTTGA+TGG + chr5.4:11846553-11846572 MS.gene59333:CDS 35.0%
AGGTGCAACAAATGTTTCAA+GGG - chr5.4:11846497-11846516 None:intergenic 35.0%
ATATCCACGATAAGAACAGA+TGG - chr5.4:11846283-11846302 None:intergenic 35.0%
CAATGATGTCAAGGCTATTA+GGG - chr5.4:11846132-11846151 None:intergenic 35.0%
CTAAGGCGGTTATTGAAAAT+GGG + chr5.4:11846617-11846636 MS.gene59333:CDS 35.0%
CTAATTCCCACCATTGAATT+AGG + chr5.4:11845998-11846017 MS.gene59333:CDS 35.0%
GGGAAATATTAACCGTTGAT+GGG + chr5.4:11846554-11846573 MS.gene59333:CDS 35.0%
GGTTACATCGAAATTATGGT+GGG - chr5.4:11846038-11846057 None:intergenic 35.0%
GTTCTTATCGTGGATATCTT+TGG + chr5.4:11846286-11846305 MS.gene59333:CDS 35.0%
GTTTCAATATCTCAGCTTGT+GGG - chr5.4:11847014-11847033 None:intergenic 35.0%
TAAGGCGGTTATTGAAAATG+GGG + chr5.4:11846618-11846637 MS.gene59333:CDS 35.0%
TATTCTTAACGGTGTTCCAA+TGG + chr5.4:11847089-11847108 MS.gene59333:CDS 35.0%
TGAATAGGACAAAAGAGGTA+GGG + chr5.4:11846968-11846987 MS.gene59333:CDS 35.0%
TGGATTTGAGAGCGAATAAA+AGG - chr5.4:11846244-11846263 None:intergenic 35.0%
TGGTTACATCGAAATTATGG+TGG - chr5.4:11846039-11846058 None:intergenic 35.0%
TGTTTCAATATCTCAGCTTG+TGG - chr5.4:11847015-11847034 None:intergenic 35.0%
TGTTTGTAGGGAAAAGATAG+CGG + chr5.4:11847215-11847234 MS.gene59333:CDS 35.0%
TTCGATTCTTGGTTGTGAAT+CGG + chr5.4:11846456-11846475 MS.gene59333:CDS 35.0%
TTGAATAGGACAAAAGAGGT+AGG + chr5.4:11846967-11846986 MS.gene59333:CDS 35.0%
TTTCAATATCTCAGCTTGTG+GGG - chr5.4:11847013-11847032 None:intergenic 35.0%
! ATTTGTCATTTGGAAGTGGT+GGG + chr5.4:11846776-11846795 MS.gene59333:CDS 35.0%
! CTAATTCAATGGTGGGAATT+AGG - chr5.4:11846000-11846019 None:intergenic 35.0%
! GAAAAAGCTTTGTCTGTGTT+TGG + chr5.4:11847315-11847334 MS.gene59333:CDS 35.0%
! GTTAAGGAGTATAAGGTAAG+TGG + chr5.4:11847291-11847310 MS.gene59333:CDS 35.0%
! TATTTGTCATTTGGAAGTGG+TGG + chr5.4:11846775-11846794 MS.gene59333:CDS 35.0%
! TGAAACATTTGTTGCACCTT+GGG + chr5.4:11846498-11846517 MS.gene59333:CDS 35.0%
! TTGAAACATTTGTTGCACCT+TGG + chr5.4:11846497-11846516 MS.gene59333:CDS 35.0%
! TTTTCTTTGCAACCAATGCT+TGG + chr5.4:11846356-11846375 MS.gene59333:CDS 35.0%
!! AATCCTAAGGATGGATTGTT+TGG - chr5.4:11846190-11846209 None:intergenic 35.0%
!! ATCCTAAGGATGGATTGTTT+GGG - chr5.4:11846189-11846208 None:intergenic 35.0%
!! ATTAACCGTTGATGGGATTT+TGG + chr5.4:11846561-11846580 MS.gene59333:CDS 35.0%
!! GTGTTGGAGAGTATTCTTAA+CGG + chr5.4:11847078-11847097 MS.gene59333:CDS 35.0%
!! TTTTGTTGTGTCTGAATCTG+AGG - chr5.4:11846083-11846102 None:intergenic 35.0%
!!! AAGGACTGCATGAGTTTTTT+GGG - chr5.4:11845954-11845973 None:intergenic 35.0%
AACAGATGGAGGATTCTTCA+TGG - chr5.4:11846269-11846288 None:intergenic 40.0%
AAGCCGTTTGCCTAATTCAA+TGG - chr5.4:11846011-11846030 None:intergenic 40.0%
ATGGAGGATTCTTCATGGAT+TGG - chr5.4:11846264-11846283 None:intergenic 40.0%
CCACCATTGAATTAGGCAAA+CGG + chr5.4:11846005-11846024 MS.gene59333:CDS 40.0%
CGTTTGCCTAATTCAATGGT+GGG - chr5.4:11846007-11846026 None:intergenic 40.0%
CTTCATCTGTGATGAAAGGA+AGG - chr5.4:11846402-11846421 None:intergenic 40.0%
GAATGCAACTATGTTATCGG+AGG + chr5.4:11847143-11847162 MS.gene59333:CDS 40.0%
GAGTCAGCAACGGTTTATTT+GGG + chr5.4:11846846-11846865 MS.gene59333:CDS 40.0%
GCTAGTAAGAACTGATGAAC+CGG + chr5.4:11846684-11846703 MS.gene59333:CDS 40.0%
GGAGGTGATTAGAAAAGTGA+TGG + chr5.4:11847236-11847255 MS.gene59333:CDS 40.0%
GGTGATTAGAAAAGTGATGG+TGG + chr5.4:11847239-11847258 MS.gene59333:CDS 40.0%
GGTTCATCAGTTCTTACTAG+CGG - chr5.4:11846685-11846704 None:intergenic 40.0%
GTTCACCAAAATCCCATCAA+CGG - chr5.4:11846569-11846588 None:intergenic 40.0%
TCACAACCAAGAATCGAAAG+CGG - chr5.4:11846454-11846473 None:intergenic 40.0%
TGACATCATTGTAACACCTC+CGG + chr5.4:11846141-11846160 MS.gene59333:CDS 40.0%
TGAGTCAGCAACGGTTTATT+TGG + chr5.4:11846845-11846864 MS.gene59333:CDS 40.0%
TGGAAAGTTTGTGAAAGGAC+CGG + chr5.4:11846645-11846664 MS.gene59333:CDS 40.0%
TGTGAACTTTATCTCCACCA+AGG + chr5.4:11847375-11847394 MS.gene59333:CDS 40.0%
TTGTGGTTGGAATTCTGTGT+TGG + chr5.4:11847062-11847081 MS.gene59333:CDS 40.0%
! CTTTTATGAATAGGTCCCCA+AGG - chr5.4:11846517-11846536 None:intergenic 40.0%
! GAAACATTTGTTGCACCTTG+GGG + chr5.4:11846499-11846518 MS.gene59333:CDS 40.0%
! GAGGTGTTACAATGATGTCA+AGG - chr5.4:11846141-11846160 None:intergenic 40.0%
! GTTTTGTGACACATTGTGGT+TGG + chr5.4:11847049-11847068 MS.gene59333:CDS 40.0%
! TACATCGAAATTATGGTGGG+TGG - chr5.4:11846035-11846054 None:intergenic 40.0%
!! AAAGTGATGGTGGATGAAGA+AGG + chr5.4:11847249-11847268 MS.gene59333:CDS 40.0%
!! AAATATATCACCGACTCAGC+CGG - chr5.4:11846760-11846779 None:intergenic 40.0%
!! TTGTGAATCGGTTCGATTTG+AGG + chr5.4:11846468-11846487 MS.gene59333:CDS 40.0%
!!! GAAGGACTGCATGAGTTTTT+TGG - chr5.4:11845955-11845974 None:intergenic 40.0%
!!! TGCAACCTTTTTCAACGTTG+CGG + chr5.4:11846900-11846919 MS.gene59333:CDS 40.0%
AACAGCAGTGAACCAAGCAT+TGG - chr5.4:11846371-11846390 None:intergenic 45.0%
AACGGTTTATTTGGGTGGTG+CGG + chr5.4:11846854-11846873 MS.gene59333:CDS 45.0%
AAGAACTGATGAACCGGAGA+AGG + chr5.4:11846690-11846709 MS.gene59333:CDS 45.0%
ACTATGTTATCGGAGGAGCT+TGG + chr5.4:11847150-11847169 MS.gene59333:CDS 45.0%
AGTTTGTCAGAGACATCGAC+CGG - chr5.4:11846163-11846182 None:intergenic 45.0%
ATAACCGCCTTAGTAGCTGT+TGG - chr5.4:11846610-11846629 None:intergenic 45.0%
ATCTTCTGCTCCGCATAAAG+CGG - chr5.4:11847123-11847142 None:intergenic 45.0%
CATGAACCGCTTTCGATTCT+TGG + chr5.4:11846445-11846464 MS.gene59333:CDS 45.0%
CCGTTTGCCTAATTCAATGG+TGG - chr5.4:11846008-11846027 None:intergenic 45.0%
GACCCAAACAATCCATCCTT+AGG + chr5.4:11846184-11846203 MS.gene59333:CDS 45.0%
GCGGTTCATGATTCTTAGCA+TGG - chr5.4:11846435-11846454 None:intergenic 45.0%
GTCCTATTCAAAAACCCCTC+TGG - chr5.4:11846958-11846977 None:intergenic 45.0%
GTTCTTACTAGCGGTCCAAT+CGG - chr5.4:11846676-11846695 None:intergenic 45.0%
TCAGCAACGGTTTATTTGGG+TGG + chr5.4:11846849-11846868 MS.gene59333:CDS 45.0%
TCCACGATAAGAACAGATGG+AGG - chr5.4:11846280-11846299 None:intergenic 45.0%
TCCTCCATCTGTTCTTATCG+TGG + chr5.4:11846276-11846295 MS.gene59333:CDS 45.0%
TGTTGTGTCTGAATCTGAGG+TGG - chr5.4:11846080-11846099 None:intergenic 45.0%
TTATCTCCACCAAGGATCTG+AGG + chr5.4:11847383-11847402 MS.gene59333:CDS 45.0%
TTGAAACATCCTTCAACGGG+TGG + chr5.4:11847027-11847046 MS.gene59333:CDS 45.0%
! AAAGGACCGGTTTATCCGAT+TGG + chr5.4:11846658-11846677 MS.gene59333:CDS 45.0%
! TGCCAGAGGGGTTTTTGAAT+AGG + chr5.4:11846953-11846972 MS.gene59333:CDS 45.0%
! TTGTAGGGAAAAGATAGCGG+AGG + chr5.4:11847218-11847237 MS.gene59333:CDS 45.0%
!! ATGGGATTTTGGTGAACACG+TGG + chr5.4:11846572-11846591 MS.gene59333:CDS 45.0%
!! GGATGGTGGTGTTGTTTGTA+GGG + chr5.4:11847203-11847222 MS.gene59333:CDS 45.0%
!!! GCAACCTTTTTCAACGTTGC+GGG + chr5.4:11846901-11846920 MS.gene59333:CDS 45.0%
!!! GGTGGTTTTGTGACACATTG+TGG + chr5.4:11847045-11847064 MS.gene59333:CDS 45.0%
ACGGTGTTCCAATGGTTGCA+TGG + chr5.4:11847097-11847116 MS.gene59333:CDS 50.0%
ACTGATGAACCGGAGAAGGA+TGG + chr5.4:11846694-11846713 MS.gene59333:CDS 50.0%
AGCGGTCCAATCGGATAAAC+CGG - chr5.4:11846667-11846686 None:intergenic 50.0%
ATGTGCAACTCACGTGCCAT+GGG - chr5.4:11846325-11846344 None:intergenic 50.0%
CATGTCGGAAGGTCAGATGA+GGG + chr5.4:11846801-11846820 MS.gene59333:CDS 50.0%
GTCACAAAACCACCCGTTGA+AGG - chr5.4:11847039-11847058 None:intergenic 50.0%
TAAAGCGGCCATGCAACCAT+TGG - chr5.4:11847108-11847127 None:intergenic 50.0%
TCACTCTCACCATCCTTCTC+CGG - chr5.4:11846706-11846725 None:intergenic 50.0%
TGCACCCGCAACGTTGAAAA+AGG - chr5.4:11846908-11846927 None:intergenic 50.0%
TGCAGATGGAACAACTGTGG+TGG + chr5.4:11846924-11846943 MS.gene59333:CDS 50.0%
! AAGGATCTGAGGCCAAAGCT+CGG + chr5.4:11847394-11847413 MS.gene59333:CDS 50.0%
! CAGATGAGGGAGTTGGCTTA+TGG + chr5.4:11846814-11846833 MS.gene59333:CDS 50.0%
! GAGGGAGTTGGCTTATGGTT+TGG + chr5.4:11846819-11846838 MS.gene59333:CDS 50.0%
! GTTTGGAGCTGAGTCAGCAA+CGG + chr5.4:11846836-11846855 MS.gene59333:CDS 50.0%
! TAGGGCTTTGTGTTCCCATG+TGG + chr5.4:11846986-11847005 MS.gene59333:CDS 50.0%
! TCTGGAGCCAACAGCTACTA+AGG + chr5.4:11846600-11846619 MS.gene59333:CDS 50.0%
! TGGTACTGCAGCTTTTCCCA+TGG + chr5.4:11846306-11846325 MS.gene59333:CDS 50.0%
! TGTGTCTGAATCTGAGGTGG+CGG - chr5.4:11846077-11846096 None:intergenic 50.0%
!! CGGATGGTGGTGTTGTTTGT+AGG + chr5.4:11847202-11847221 MS.gene59333:CDS 50.0%
!! GTGGTGGATTACTTGCCAGA+GGG + chr5.4:11846940-11846959 MS.gene59333:CDS 50.0%
!! TGGTGGATTACTTGCCAGAG+GGG + chr5.4:11846941-11846960 MS.gene59333:CDS 50.0%
!! TGTGGTGGATTACTTGCCAG+AGG + chr5.4:11846939-11846958 MS.gene59333:CDS 50.0%
CATGTGCAACTCACGTGCCA+TGG - chr5.4:11846326-11846345 None:intergenic 55.0%
CCATGTCGGAAGGTCAGATG+AGG + chr5.4:11846800-11846819 MS.gene59333:CDS 55.0%
CCTCATCTGACCTTCCGACA+TGG - chr5.4:11846803-11846822 None:intergenic 55.0%
CTTCTAGCCAGTCCTGGCAT+GGG + chr5.4:11845971-11845990 MS.gene59333:CDS 55.0%
CTTTGGCCTCAGATCCTTGG+TGG - chr5.4:11847392-11847411 None:intergenic 55.0%
GCAGATGCACCGTCCTTTGT+GGG - chr5.4:11846883-11846902 None:intergenic 55.0%
GGAAGGTCAGATGAGGGAGT+TGG + chr5.4:11846807-11846826 MS.gene59333:CDS 55.0%
GGAATTAGGTGTCCCATGCC+AGG - chr5.4:11845986-11846005 None:intergenic 55.0%
GGAGCCAACAGCTACTAAGG+CGG + chr5.4:11846603-11846622 MS.gene59333:CDS 55.0%
GGGTGCAGATGGAACAACTG+TGG + chr5.4:11846921-11846940 MS.gene59333:CDS 55.0%
GGTGAACACGTGGCAAGATC+TGG + chr5.4:11846582-11846601 MS.gene59333:CDS 55.0%
GGTTTATTTGGGTGGTGCGG+CGG + chr5.4:11846857-11846876 MS.gene59333:CDS 55.0%
TCAGCTTGTGGGGACCACAT+GGG - chr5.4:11847003-11847022 None:intergenic 55.0%
TGCAGATGCACCGTCCTTTG+TGG - chr5.4:11846884-11846903 None:intergenic 55.0%
TTCAACGTTGCGGGTGCAGA+TGG + chr5.4:11846910-11846929 MS.gene59333:CDS 55.0%
TTGTCAGAGACATCGACCGG+AGG - chr5.4:11846160-11846179 None:intergenic 55.0%
! AGGATCTGAGGCCAAAGCTC+GGG + chr5.4:11847395-11847414 MS.gene59333:CDS 55.0%
! GAGCTTTGGCCTCAGATCCT+TGG - chr5.4:11847395-11847414 None:intergenic 55.0%
! GGTTGCATGGCCGCTTTATG+CGG + chr5.4:11847110-11847129 MS.gene59333:CDS 55.0%
! GTTATCGGAGGAGCTTGGTG+TGG + chr5.4:11847155-11847174 MS.gene59333:CDS 55.0%
! TGGAAGTGGTGGGACCATGT+CGG + chr5.4:11846786-11846805 MS.gene59333:CDS 55.0%
!! GAGTTGGCTTGACCGACAAC+CGG + chr5.4:11846738-11846757 MS.gene59333:CDS 55.0%
CCTTCTAGCCAGTCCTGGCA+TGG + chr5.4:11845970-11845989 MS.gene59333:CDS 60.0%
CTCAGCTTGTGGGGACCACA+TGG - chr5.4:11847004-11847023 None:intergenic 60.0%
GCAGTCCTTCTAGCCAGTCC+TGG + chr5.4:11845965-11845984 MS.gene59333:CDS 60.0%
GGCGGTTGTGACGACGAAGA+TGG - chr5.4:11846059-11846078 None:intergenic 60.0%
TAGGTGTCCCATGCCAGGAC+TGG - chr5.4:11845981-11846000 None:intergenic 60.0%
TGACCGACAACCGGCTGAGT+CGG + chr5.4:11846747-11846766 MS.gene59333:CDS 60.0%
! AGTGGTGGGACCATGTCGGA+AGG + chr5.4:11846790-11846809 MS.gene59333:CDS 60.0%
! GGATCTGAGGCCAAAGCTCG+GGG + chr5.4:11847396-11847415 MS.gene59333:CDS 60.0%
!! ATCGGAGGAGCTTGGTGTGG+CGG + chr5.4:11847158-11847177 MS.gene59333:CDS 60.0%
!! CCATGCCAGGACTGGCTAGA+AGG - chr5.4:11845973-11845992 None:intergenic 60.0%
!! TCACCGACTCAGCCGGTTGT+CGG - chr5.4:11846753-11846772 None:intergenic 60.0%
GAAAGCGACGACGACGGTGG+CGG + chr5.4:11847182-11847201 MS.gene59333:CDS 65.0%
GGCGGTGAAAGCGACGACGA+CGG + chr5.4:11847176-11847195 MS.gene59333:CDS 65.0%
GGTGAAAGCGACGACGACGG+TGG + chr5.4:11847179-11847198 MS.gene59333:CDS 65.0%
GTGCGGCGGCCCACAAAGGA+CGG + chr5.4:11846871-11846890 MS.gene59333:CDS 70.0%
!! ACGACGACGGTGGCGGATGG+TGG + chr5.4:11847189-11847208 MS.gene59333:CDS 70.0%
GGTGGTGCGGCGGCCCACAA+AGG + chr5.4:11846867-11846886 MS.gene59333:CDS 75.0%
!! GCGACGACGACGGTGGCGGA+TGG + chr5.4:11847186-11847205 MS.gene59333:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 11845944 11847425 11845944 ID=MS.gene59333
chr5.4 mRNA 11845944 11847425 11845944 ID=MS.gene59333.t1;Parent=MS.gene59333
chr5.4 exon 11845944 11847425 11845944 ID=MS.gene59333.t1.exon1;Parent=MS.gene59333.t1
chr5.4 CDS 11845944 11847425 11845944 ID=cds.MS.gene59333.t1;Parent=MS.gene59333.t1
Gene Sequence

>MS.gene59333

ATGGTGTCCCAAAAAACTCATGCAGTCCTTCTAGCCAGTCCTGGCATGGGACACCTAATTCCCACCATTGAATTAGGCAAACGGCTTACCACCCACCATAATTTCGATGTAACCATCTTCGTCGTCACAACCGCCACCTCAGATTCAGACACAACAAAATCACATATACTTCAACAAGTATCAAACCCTAATAGCCTTGACATCATTGTAACACCTCCGGTCGATGTCTCTGACAAACTTGACCCAAACAATCCATCCTTAGGATTACAAATTGTTCTAATCATGGTTGAATCTCTTCCTTTTATTCGCTCTCAAATCCAATCCATGAAGAATCCTCCATCTGTTCTTATCGTGGATATCTTTGGTACTGCAGCTTTTCCCATGGCACGTGAGTTGCACATGTCGAGTTACGTTTTCTTTGCAACCAATGCTTGGTTCACTGCTGTTAACTTATACCTTCCTTTCATCACAGATGAAGCTTTTTCACGCCATGCTAAGAATCATGAACCGCTTTCGATTCTTGGTTGTGAATCGGTTCGATTTGAGGATACCCTTGAAACATTTGTTGCACCTTGGGGACCTATTCATAAAAGTTACGTTGAAGTCACAAGGGAAATATTAACCGTTGATGGGATTTTGGTGAACACGTGGCAAGATCTGGAGCCAACAGCTACTAAGGCGGTTATTGAAAATGGGGTTTTTGGAAAGTTTGTGAAAGGACCGGTTTATCCGATTGGACCGCTAGTAAGAACTGATGAACCGGAGAAGGATGGTGAGAGTGAAAATTTAATTTTGAGTTGGCTTGACCGACAACCGGCTGAGTCGGTGATATATTTGTCATTTGGAAGTGGTGGGACCATGTCGGAAGGTCAGATGAGGGAGTTGGCTTATGGTTTGGAGCTGAGTCAGCAACGGTTTATTTGGGTGGTGCGGCGGCCCACAAAGGACGGTGCATCTGCAACCTTTTTCAACGTTGCGGGTGCAGATGGAACAACTGTGGTGGATTACTTGCCAGAGGGGTTTTTGAATAGGACAAAAGAGGTAGGGCTTTGTGTTCCCATGTGGTCCCCACAAGCTGAGATATTGAAACATCCTTCAACGGGTGGTTTTGTGACACATTGTGGTTGGAATTCTGTGTTGGAGAGTATTCTTAACGGTGTTCCAATGGTTGCATGGCCGCTTTATGCGGAGCAGAAGATGAATGCAACTATGTTATCGGAGGAGCTTGGTGTGGCGGTGAAAGCGACGACGACGGTGGCGGATGGTGGTGTTGTTTGTAGGGAAAAGATAGCGGAGGTGATTAGAAAAGTGATGGTGGATGAAGAAGGTGTAACTATGAGAGTTAAAGTTAAGGAGTATAAGGTAAGTGGAGAAAAAGCTTTGTCTGTGTTTGGTTCTTCTAATGAAATGCTCTCTAAGATGGCAAAAGATTGTGAACTTTATCTCCACCAAGGATCTGAGGCCAAAGCTCGGGGTGCTTAA

Protein sequence

>MS.gene59333.t1

MVSQKTHAVLLASPGMGHLIPTIELGKRLTTHHNFDVTIFVVTTATSDSDTTKSHILQQVSNPNSLDIIVTPPVDVSDKLDPNNPSLGLQIVLIMVESLPFIRSQIQSMKNPPSVLIVDIFGTAAFPMARELHMSSYVFFATNAWFTAVNLYLPFITDEAFSRHAKNHEPLSILGCESVRFEDTLETFVAPWGPIHKSYVEVTREILTVDGILVNTWQDLEPTATKAVIENGVFGKFVKGPVYPIGPLVRTDEPEKDGESENLILSWLDRQPAESVIYLSFGSGGTMSEGQMRELAYGLELSQQRFIWVVRRPTKDGASATFFNVAGADGTTVVDYLPEGFLNRTKEVGLCVPMWSPQAEILKHPSTGGFVTHCGWNSVLESILNGVPMVAWPLYAEQKMNATMLSEELGVAVKATTTVADGGVVCREKIAEVIRKVMVDEEGVTMRVKVKEYKVSGEKALSVFGSSNEMLSKMAKDCELYLHQGSEAKARGA