AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene89852

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89852.t1 MTR_5g019580 90.264 493 48 0 1 493 1 493 0.0 927
MS.gene89852.t1 MTR_5g019580 84.787 493 47 1 1 493 53 517 0.0 855
MS.gene89852.t1 MTR_8g074550 47.433 487 233 12 6 476 7 486 1.55e-142 419
MS.gene89852.t1 MTR_0078s0010 40.619 485 263 14 2 479 1 467 2.50e-107 328
MS.gene89852.t1 MTR_7g117170 39.362 470 268 8 9 475 17 472 7.50e-106 324
MS.gene89852.t1 MTR_8g006710 37.860 486 266 13 2 475 1 462 1.48e-105 323
MS.gene89852.t1 MTR_8g027885 39.446 469 261 11 10 475 21 469 3.21e-105 322
MS.gene89852.t1 MTR_7g047030 39.669 484 269 14 2 479 1 467 1.99e-104 320
MS.gene89852.t1 MTR_7g047270 39.669 484 269 14 2 479 1 467 1.99e-104 320
MS.gene89852.t1 MTR_8g006730 37.728 493 272 14 2 484 1 468 5.89e-104 319
MS.gene89852.t1 MTR_8g027870 38.248 468 268 9 10 475 21 469 1.69e-103 318
MS.gene89852.t1 MTR_0078s0060 40.619 485 264 14 2 480 1 467 1.76e-103 318
MS.gene89852.t1 MTR_8g009055 38.365 477 277 11 2 475 1 463 9.67e-102 313
MS.gene89852.t1 MTR_6g023665 36.961 487 280 13 2 481 8 474 3.54e-101 312
MS.gene89852.t1 MTR_0184s0040 38.716 483 274 12 2 479 16 481 5.88e-101 311
MS.gene89852.t1 MTR_0078s0190 38.716 483 274 12 2 479 16 481 5.88e-101 311
MS.gene89852.t1 MTR_8g008990 37.996 479 278 11 2 475 1 465 4.83e-100 309
MS.gene89852.t1 MTR_6g488280 36.853 483 274 13 2 475 1 461 8.16e-100 308
MS.gene89852.t1 MTR_0428s0010 36.853 483 274 13 2 475 1 461 8.16e-100 308
MS.gene89852.t1 MTR_8g009050 38.983 472 271 11 7 475 6 463 2.95e-98 304
MS.gene89852.t1 MTR_8g009073 36.590 481 278 12 2 475 1 461 6.06e-96 298
MS.gene89852.t1 MTR_1g019510 37.076 472 277 11 7 475 6 460 3.64e-94 293
MS.gene89852.t1 MTR_8g006270 36.709 474 280 13 4 474 3 459 2.47e-92 289
MS.gene89852.t1 MTR_8g006260 34.864 479 288 12 5 475 4 466 2.09e-90 284
MS.gene89852.t1 MTR_8g465670 35.113 487 282 14 1 474 1 466 2.25e-90 284
MS.gene89852.t1 MTR_8g009067 36.786 473 276 11 7 474 6 460 9.84e-90 282
MS.gene89852.t1 MTR_8g009063 35.084 476 292 8 2 474 8 469 3.73e-89 281
MS.gene89852.t1 MTR_7g046490 35.565 478 284 13 2 474 1 459 8.15e-89 280
MS.gene89852.t1 MTR_8g012635 35.270 482 290 11 2 475 1 468 1.32e-88 280
MS.gene89852.t1 MTR_0184s0030 34.774 486 291 11 2 479 1 468 3.53e-88 278
MS.gene89852.t1 MTR_8g077590 34.664 476 285 11 6 475 8 463 3.17e-87 276
MS.gene89852.t1 MTR_8g012650 34.096 481 297 10 2 475 1 468 7.87e-85 270
MS.gene89852.t1 MTR_8g008970 35.491 479 286 11 2 475 1 461 5.49e-84 276
MS.gene89852.t1 MTR_8g008970 37.634 279 149 4 196 474 531 784 4.19e-49 180
MS.gene89852.t1 MTR_6g005600 34.728 478 296 8 5 479 4 468 1.76e-83 266
MS.gene89852.t1 MTR_8g012745 35.491 479 284 12 2 472 1 462 7.07e-83 265
MS.gene89852.t1 MTR_8g006220 34.274 496 283 16 2 475 1 475 4.81e-82 263
MS.gene89852.t1 MTR_6g033625 35.052 485 278 12 5 476 2 462 2.18e-81 260
MS.gene89852.t1 MTR_8g009073 39.244 344 195 6 134 475 1 332 9.07e-80 252
MS.gene89852.t1 MTR_3g009510 33.874 493 300 13 4 483 2 481 1.39e-78 253
MS.gene89852.t1 MTR_8g009067 37.714 350 208 4 125 474 3 342 1.80e-77 246
MS.gene89852.t1 MTR_6g033725 33.817 482 283 12 5 475 2 458 2.25e-76 248
MS.gene89852.t1 MTR_8g012630 34.694 490 234 15 2 479 1 416 3.00e-76 246
MS.gene89852.t1 MTR_6g033615 33.542 480 278 9 5 476 2 448 3.28e-74 241
MS.gene89852.t1 MTR_5g090630 32.510 486 287 14 4 474 2 461 3.75e-72 236
MS.gene89852.t1 MTR_5g098930 31.959 485 293 14 4 474 2 463 4.79e-71 233
MS.gene89852.t1 MTR_6g033660 33.974 468 279 8 9 467 6 452 1.73e-69 230
MS.gene89852.t1 MTR_6g033675 31.893 486 290 10 5 475 2 461 2.71e-67 224
MS.gene89852.t1 MTR_8g012730 36.202 337 177 5 147 472 3 312 5.22e-67 218
MS.gene89852.t1 MTR_5g090700 32.056 496 287 16 4 474 2 472 1.36e-66 222
MS.gene89852.t1 MTR_5g090670 32.661 496 284 16 4 474 2 472 1.41e-66 222
MS.gene89852.t1 MTR_5g090580 32.114 492 290 18 4 474 2 470 1.54e-66 222
MS.gene89852.t1 MTR_5g090610 31.288 489 284 16 4 474 2 456 5.41e-66 220
MS.gene89852.t1 MTR_2g040530 32.860 493 279 16 5 477 3 463 4.73e-65 218
MS.gene89852.t1 MTR_5g090600 31.084 489 278 15 4 474 2 449 6.75e-63 212
MS.gene89852.t1 MTR_1g019520 47.032 219 111 2 265 483 4 217 1.72e-62 203
MS.gene89852.t1 MTR_5g090660 32.317 492 287 18 4 474 2 468 2.01e-62 213
MS.gene89852.t1 MTR_2g046820 31.124 498 279 14 5 477 3 461 7.97e-62 209
MS.gene89852.t1 MTR_5g090620 31.301 492 295 15 4 474 2 471 2.35e-61 208
MS.gene89852.t1 MTR_5g070090 30.346 491 291 17 2 477 6 460 2.80e-59 202
MS.gene89852.t1 MTR_2g046750 30.876 502 278 16 5 477 3 464 7.51e-59 201
MS.gene89852.t1 MTR_5g070040 30.526 475 269 17 2 452 6 443 3.53e-58 199
MS.gene89852.t1 MTR_5g087620 30.120 498 284 14 4 465 7 476 2.98e-50 179
MS.gene89852.t1 MTR_0009s0240 30.461 499 277 19 1 474 1 454 1.00e-49 177
MS.gene89852.t1 MTR_8g066610 29.102 512 300 14 3 484 5 483 6.19e-47 170
MS.gene89852.t1 MTR_4g485630 28.261 506 294 14 3 477 5 472 5.22e-46 167
MS.gene89852.t1 MTR_4g031800 29.365 504 274 20 15 483 17 473 8.49e-45 164
MS.gene89852.t1 MTR_8g090095 31.343 335 179 8 168 467 150 468 5.15e-44 162
MS.gene89852.t1 MTR_6g014250 26.614 511 303 16 1 477 4 476 7.17e-44 161
MS.gene89852.t1 MTR_5g464760 28.880 509 282 20 4 474 9 475 2.31e-43 160
MS.gene89852.t1 MTR_4g082820 28.827 503 289 16 1 476 1 461 3.04e-43 159
MS.gene89852.t1 MTR_8g009840 43.915 189 102 2 286 474 337 521 3.48e-43 160
MS.gene89852.t1 MTR_7g102490 29.320 515 296 18 1 477 1 485 6.24e-43 159
MS.gene89852.t1 MTR_4g008630 38.298 235 134 4 242 475 236 460 8.72e-43 158
MS.gene89852.t1 MTR_8g466240 28.889 495 282 15 5 477 6 452 1.01e-42 158
MS.gene89852.t1 MTR_3g009490 40.212 189 105 3 291 476 3 186 1.53e-42 150
MS.gene89852.t1 MTR_4g485640 28.400 500 291 16 8 478 210 671 1.55e-42 160
MS.gene89852.t1 MTR_6g014220 27.593 511 298 19 1 477 4 476 2.33e-42 157
MS.gene89852.t1 MTR_2g098430 27.366 486 275 17 2 452 1 443 3.44e-42 157
MS.gene89852.t1 MTR_7g070800 27.148 512 287 19 5 474 4 471 8.76e-42 155
MS.gene89852.t1 MTR_3g069710 34.146 287 159 5 195 477 190 450 9.23e-42 155
MS.gene89852.t1 MTR_3g049970 26.220 492 310 12 7 477 9 468 1.50e-41 155
MS.gene89852.t1 MTR_7g070940 35.926 270 137 7 211 467 215 461 1.58e-41 155
MS.gene89852.t1 MTR_6g038240 27.642 492 278 17 3 469 7 445 1.58e-41 154
MS.gene89852.t1 MTR_4g094220 28.008 507 285 19 1 467 1 467 1.80e-41 155
MS.gene89852.t1 MTR_7g070810 36.800 250 130 5 242 479 243 476 2.07e-41 155
MS.gene89852.t1 MTR_8g064870 25.462 487 318 11 9 477 13 472 2.36e-41 154
MS.gene89852.t1 MTR_1g029540 36.596 235 139 4 242 475 232 457 2.37e-41 154
MS.gene89852.t1 MTR_7g070660 34.982 283 151 8 211 479 217 480 2.51e-41 154
MS.gene89852.t1 MTR_6g038300 26.721 494 295 14 7 480 11 457 2.67e-41 154
MS.gene89852.t1 MTR_5g045960 28.235 510 301 17 3 477 5 484 5.10e-41 154
MS.gene89852.t1 MTR_1g107350 26.572 493 307 14 7 477 8 467 5.66e-41 153
MS.gene89852.t1 MTR_5g035560 27.629 485 294 11 3 474 7 447 8.22e-41 153
MS.gene89852.t1 MTR_6g014290 25.444 507 314 14 1 477 4 476 1.31e-40 152
MS.gene89852.t1 MTR_7g070860 26.834 518 275 18 1 474 1 458 1.32e-40 152
MS.gene89852.t1 MTR_4g064987 30.376 372 210 13 114 476 110 441 1.60e-40 151
MS.gene89852.t1 MTR_3g008010 27.237 514 288 19 5 477 8 476 1.67e-40 152
MS.gene89852.t1 MTR_1g032490 25.761 493 311 12 7 477 10 469 4.31e-40 151
MS.gene89852.t1 MTR_6g014170 28.968 504 284 21 1 477 4 460 5.79e-40 150
MS.gene89852.t1 MTR_5g072830 26.392 485 296 16 7 477 10 447 8.20e-40 149
MS.gene89852.t1 MTR_5g035580 27.347 490 289 16 3 474 9 449 9.97e-40 149
MS.gene89852.t1 MTR_7g071040 26.769 523 283 19 3 474 13 486 1.95e-39 149
MS.gene89852.t1 MTR_0036s0220 27.921 505 290 22 7 477 12 476 3.07e-39 149
MS.gene89852.t1 MTR_5g058320 27.689 502 302 18 1 480 4 466 3.51e-39 148
MS.gene89852.t1 MTR_4g024020 28.119 505 288 18 5 468 7 477 3.69e-39 149
MS.gene89852.t1 MTR_7g011470 27.579 504 291 14 1 477 4 460 4.56e-39 148
MS.gene89852.t1 MTR_5g464810 28.291 509 285 20 6 477 11 476 4.94e-39 148
MS.gene89852.t1 MTR_5g064240 28.291 509 285 20 6 477 11 476 4.94e-39 148
MS.gene89852.t1 MTR_4g117960 27.200 500 290 22 14 477 18 479 5.68e-39 148
MS.gene89852.t1 MTR_6g013990 32.075 318 177 7 173 480 191 479 5.97e-39 148
MS.gene89852.t1 MTR_7g011470 28.063 506 290 15 1 477 4 464 6.24e-39 147
MS.gene89852.t1 MTR_7g102460 29.198 524 283 23 1 477 1 483 7.71e-39 148
MS.gene89852.t1 MTR_4g064987 29.815 379 209 14 114 476 110 447 1.13e-38 146
MS.gene89852.t1 MTR_6g038200 26.531 490 278 18 7 469 11 445 1.65e-38 146
MS.gene89852.t1 MTR_4g108250 27.961 515 290 17 3 474 7 483 2.44e-38 146
MS.gene89852.t1 MTR_7g102550 34.564 298 148 9 207 484 214 484 3.30e-38 145
MS.gene89852.t1 MTR_4g128690 31.129 363 201 12 114 467 119 441 3.90e-38 145
MS.gene89852.t1 MTR_8g059425 25.845 503 311 13 4 477 7 476 3.99e-38 145
MS.gene89852.t1 MTR_7g070780 37.441 211 111 5 265 467 275 472 4.90e-38 145
MS.gene89852.t1 MTR_4g485620 27.495 491 300 13 19 484 1 460 6.82e-38 144
MS.gene89852.t1 MTR_7g070930 27.099 524 266 20 3 467 10 476 7.69e-38 145
MS.gene89852.t1 MTR_6g038230 26.465 495 282 15 7 474 11 450 9.28e-38 144
MS.gene89852.t1 MTR_6g014050 31.975 319 172 11 173 477 192 479 1.11e-37 144
MS.gene89852.t1 MTR_1g107360 26.104 498 291 16 9 477 11 460 1.24e-37 144
MS.gene89852.t1 MTR_7g070740 28.958 518 275 20 4 474 8 479 1.25e-37 144
MS.gene89852.t1 MTR_7g055710 27.079 517 290 23 1 471 1 476 1.45e-37 144
MS.gene89852.t1 MTR_8g083290 27.383 493 291 13 7 471 3 456 1.55e-37 144
MS.gene89852.t1 MTR_4g485590 36.652 221 110 3 201 413 181 379 2.00e-37 142
MS.gene89852.t1 MTR_3g479520 26.908 524 294 21 2 484 10 485 2.70e-37 143
MS.gene89852.t1 MTR_1g107315 26.295 502 305 16 5 479 6 469 4.20e-37 142
MS.gene89852.t1 MTR_4g117890 27.126 494 274 20 17 472 23 468 4.53e-37 142
MS.gene89852.t1 MTR_4g128720 25.567 485 306 12 4 476 12 453 5.04e-37 142
MS.gene89852.t1 MTR_1g062380 28.185 518 284 18 7 477 16 492 5.10e-37 142
MS.gene89852.t1 MTR_2g008210 26.204 519 297 21 3 481 7 479 6.07e-37 142
MS.gene89852.t1 MTR_8g071070 26.400 500 310 17 1 476 1 466 6.09e-37 142
MS.gene89852.t1 MTR_8g064880 26.176 489 316 13 9 477 11 474 9.02e-37 142
MS.gene89852.t1 MTR_7g013240 25.572 481 294 17 7 474 6 435 9.03e-37 141
MS.gene89852.t1 MTR_6g038220 26.337 486 283 15 7 469 11 444 9.19e-37 141
MS.gene89852.t1 MTR_4g094920 33.333 261 150 6 241 492 246 491 1.10e-36 142
MS.gene89852.t1 MTR_6g013920 31.230 317 177 8 173 477 190 477 1.13e-36 141
MS.gene89852.t1 MTR_7g070610 28.235 510 270 25 7 467 13 475 1.18e-36 142
MS.gene89852.t1 MTR_6g013440 26.550 516 301 18 3 480 7 482 1.40e-36 141
MS.gene89852.t1 MTR_6g035185 26.368 402 236 13 110 481 114 485 1.59e-36 141
MS.gene89852.t1 MTR_0078s0200 30.247 324 205 8 2 317 1 311 1.92e-36 137
MS.gene89852.t1 MTR_5g045970 33.217 286 153 8 211 477 225 491 2.30e-36 141
MS.gene89852.t1 MTR_5g072840 26.653 484 296 16 7 477 10 447 2.33e-36 140
MS.gene89852.t1 MTR_0536s0020 26.693 502 282 20 17 480 28 481 2.45e-36 140
MS.gene89852.t1 MTR_1g107285 24.798 496 303 14 9 477 10 462 2.97e-36 140
MS.gene89852.t1 MTR_7g013260 30.640 297 163 10 185 474 176 436 3.48e-36 139
MS.gene89852.t1 MTR_6g013450 27.290 513 298 20 5 480 8 482 3.87e-36 140
MS.gene89852.t1 MTR_6g013900 30.599 317 179 8 173 477 190 477 4.04e-36 140
MS.gene89852.t1 MTR_2g034990 27.865 384 235 14 110 472 114 476 4.24e-36 140
MS.gene89852.t1 MTR_7g070910 25.926 513 296 19 5 474 9 480 4.69e-36 140
MS.gene89852.t1 MTR_1g107375 25.806 496 292 15 7 477 8 452 5.04e-36 139
MS.gene89852.t1 MTR_6g014040 27.237 514 295 21 3 477 6 479 5.52e-36 139
MS.gene89852.t1 MTR_0891s0010 30.345 290 162 8 200 477 27 288 5.65e-36 135
MS.gene89852.t1 MTR_6g014020 26.139 505 309 15 4 477 7 478 6.50e-36 139
MS.gene89852.t1 MTR_3g479490 26.747 501 294 22 2 468 1 462 8.24e-36 139
MS.gene89852.t1 MTR_7g012120 31.419 296 167 9 206 479 209 490 9.28e-36 139
MS.gene89852.t1 MTR_6g014200 28.794 514 290 19 1 477 1 475 1.04e-35 139
MS.gene89852.t1 MTR_4g082810 27.273 429 254 17 1 405 1 395 1.11e-35 137
MS.gene89852.t1 MTR_1g107365 25.050 503 303 15 7 486 45 496 1.32e-35 139
MS.gene89852.t1 MTR_1g107380 29.967 307 173 10 185 477 193 471 2.65e-35 137
MS.gene89852.t1 MTR_4g095008 33.740 246 135 5 241 474 231 460 2.93e-35 138
MS.gene89852.t1 MTR_6g014270 27.290 513 301 19 1 477 1 477 2.94e-35 137
MS.gene89852.t1 MTR_5g072810 24.593 492 301 14 6 477 11 452 3.64e-35 137
MS.gene89852.t1 MTR_4g117950 29.219 397 207 16 110 474 104 458 4.53e-35 137
MS.gene89852.t1 MTR_7g013180 26.471 476 292 16 7 464 5 440 4.97e-35 136
MS.gene89852.t1 MTR_4g118000 29.110 292 175 8 211 486 199 474 5.00e-35 137
MS.gene89852.t1 MTR_6g014310 29.781 319 181 10 172 477 191 479 5.40e-35 137
MS.gene89852.t1 MTR_7g067120 35.270 241 117 8 235 463 202 415 9.04e-35 135
MS.gene89852.t1 MTR_5g072820 25.979 485 300 15 6 477 9 447 1.64e-34 135
MS.gene89852.t1 MTR_6g013960 30.189 318 179 10 173 477 191 478 1.94e-34 135
MS.gene89852.t1 MTR_0536s0010 25.697 502 269 22 17 474 31 472 2.05e-34 135
MS.gene89852.t1 MTR_0288s0020 24.902 510 296 17 1 477 4 459 2.49e-34 134
MS.gene89852.t1 MTR_6g035265 27.431 401 221 14 110 477 109 472 2.56e-34 135
MS.gene89852.t1 MTR_7g013200 33.333 210 118 6 244 452 228 416 2.64e-34 134
MS.gene89852.t1 MTR_7g067330 34.855 241 120 8 228 463 207 415 2.68e-34 134
MS.gene89852.t1 MTR_3g479470 25.875 514 298 16 3 477 9 478 3.21e-34 134
MS.gene89852.t1 MTR_7g470610 35.897 234 115 7 211 431 74 285 3.58e-34 130
MS.gene89852.t1 MTR_7g070583 35.897 234 115 7 211 431 74 285 3.58e-34 130
MS.gene89852.t1 MTR_2g035040 29.721 323 181 12 181 472 74 381 3.79e-34 133
MS.gene89852.t1 MTR_3g079480 27.043 514 308 19 3 486 17 493 4.19e-34 134
MS.gene89852.t1 MTR_8g088560 27.088 491 296 18 7 476 10 459 4.24e-34 134
MS.gene89852.t1 MTR_8g006230 34.951 206 127 3 116 320 55 254 8.22e-34 129
MS.gene89852.t1 MTR_3g479610 29.965 287 156 9 211 484 61 315 8.41e-34 130
MS.gene89852.t1 MTR_0477s0010 34.742 213 117 3 265 477 125 315 8.79e-34 130
MS.gene89852.t1 MTR_6g014190 33.803 213 119 3 265 477 95 285 8.89e-34 129
MS.gene89852.t1 MTR_6g014187 24.950 505 315 13 4 477 7 478 9.15e-34 133
MS.gene89852.t1 MTR_7g117405 33.451 284 150 9 211 477 218 479 1.16e-33 133
MS.gene89852.t1 MTR_2g059240 26.358 497 286 19 7 471 13 461 1.30e-33 132
MS.gene89852.t1 MTR_8g007585 35.047 214 117 4 264 477 199 390 2.03e-33 130
MS.gene89852.t1 MTR_5g027210 31.225 253 151 3 205 442 206 450 3.94e-33 131
MS.gene89852.t1 MTR_6g014150 33.333 219 124 4 259 477 279 475 7.30e-33 130
MS.gene89852.t1 MTR_6g011340 29.861 288 163 8 200 477 220 478 7.32e-33 130
MS.gene89852.t1 MTR_3g084540 26.052 499 319 14 2 477 1 472 7.52e-33 130
MS.gene89852.t1 MTR_7g071050 33.480 227 126 4 248 464 214 425 9.34e-33 129
MS.gene89852.t1 MTR_5g016480 24.400 500 317 16 4 477 5 469 1.08e-32 130
MS.gene89852.t1 MTR_8g007565 25.780 481 286 17 1 452 1 439 1.65e-32 129
MS.gene89852.t1 MTR_7g102560 31.773 299 159 9 211 487 214 489 1.72e-32 130
MS.gene89852.t1 MTR_5g016660 26.378 508 286 18 5 467 8 472 1.74e-32 130
MS.gene89852.t1 MTR_8g083280 31.599 269 152 5 212 477 221 460 1.88e-32 129
MS.gene89852.t1 MTR_4g123553 34.016 244 129 5 239 477 236 452 1.98e-32 129
MS.gene89852.t1 MTR_5g029800 25.510 490 312 18 17 479 21 484 2.48e-32 129
MS.gene89852.t1 MTR_7g080900 25.458 491 290 15 3 469 8 446 2.91e-32 129
MS.gene89852.t1 MTR_8g007650 25.780 481 286 17 1 452 1 439 3.42e-32 129
MS.gene89852.t1 MTR_2g035020 30.877 285 165 11 206 472 206 476 3.46e-32 129
MS.gene89852.t1 MTR_6g042310 27.500 480 274 14 7 461 18 448 3.54e-32 129
MS.gene89852.t1 MTR_4g117980 25.437 515 297 20 5 477 11 480 3.93e-32 129
MS.gene89852.t1 MTR_5g031830 30.548 383 198 16 114 467 116 459 5.67e-32 128
MS.gene89852.t1 MTR_7g013220 26.069 491 285 20 7 471 5 443 5.85e-32 127
MS.gene89852.t1 MTR_6g014240 27.913 369 204 12 128 477 120 445 6.42e-32 127
MS.gene89852.t1 MTR_7g102520 34.363 259 132 7 242 477 244 487 6.80e-32 128
MS.gene89852.t1 MTR_7g102450 31.930 285 158 6 211 477 204 470 6.91e-32 128
MS.gene89852.t1 MTR_7g070870 32.234 273 152 7 185 445 196 447 7.08e-32 127
MS.gene89852.t1 MTR_5g072860 25.714 490 282 15 7 467 18 454 7.59e-32 127
MS.gene89852.t1 MTR_8g043470 32.381 210 120 3 265 474 186 373 8.50e-32 126
MS.gene89852.t1 MTR_3g069690 25.971 489 298 16 3 474 4 445 1.02e-31 127
MS.gene89852.t1 MTR_7g080935 25.558 493 289 17 1 469 5 443 1.16e-31 127
MS.gene89852.t1 MTR_8g044140 35.409 257 134 10 242 481 210 451 1.18e-31 127
MS.gene89852.t1 MTR_5g066410 34.914 232 121 7 233 452 202 415 1.38e-31 126
MS.gene89852.t1 MTR_5g090690 32.000 275 143 9 114 383 70 305 1.48e-31 125
MS.gene89852.t1 MTR_5g004940 33.913 230 107 6 244 448 182 391 1.84e-31 125
MS.gene89852.t1 MTR_7g080940 24.486 486 303 13 1 469 5 443 1.91e-31 126
MS.gene89852.t1 MTR_3g031450 24.255 470 302 13 6 467 17 440 4.45e-31 125
MS.gene89852.t1 MTR_3g084530 26.535 505 308 15 2 477 1 471 6.09e-31 125
MS.gene89852.t1 MTR_6g078320 24.510 510 312 14 6 480 10 481 8.14e-31 125
MS.gene89852.t1 MTR_4g077960 34.274 248 135 6 239 481 213 437 1.03e-30 124
MS.gene89852.t1 MTR_2g008220 32.296 257 144 5 201 452 208 439 1.15e-30 124
MS.gene89852.t1 MTR_5g067170 25.364 481 313 12 14 472 18 474 1.33e-30 124
MS.gene89852.t1 MTR_6g035295 25.197 508 299 18 18 484 23 490 1.64e-30 124
MS.gene89852.t1 MTR_8g068330 31.132 318 159 10 170 454 150 440 1.97e-30 124
MS.gene89852.t1 MTR_3g031400 24.948 477 288 14 6 467 17 438 2.08e-30 124
MS.gene89852.t1 MTR_8g068340 37.727 220 109 6 242 454 246 444 2.22e-30 123
MS.gene89852.t1 MTR_1g040310 33.333 255 136 8 244 481 249 486 3.46e-30 123
MS.gene89852.t1 MTR_5g031840 32.031 256 128 10 200 442 204 426 4.03e-30 122
MS.gene89852.t1 MTR_3g084520 23.866 507 319 14 2 477 1 471 6.56e-30 122
MS.gene89852.t1 MTR_8g032950 32.456 228 135 5 260 477 261 479 6.93e-30 122
MS.gene89852.t1 MTR_5g031860 26.477 491 287 18 7 467 12 458 8.30e-30 122
MS.gene89852.t1 MTR_8g068360 31.613 310 160 9 173 454 158 443 8.32e-30 122
MS.gene89852.t1 MTR_2g008226 34.234 222 124 5 234 452 242 444 1.51e-29 121
MS.gene89852.t1 MTR_5g075440 23.467 473 288 15 6 455 9 430 2.64e-29 120
MS.gene89852.t1 MTR_6g014300 25.198 504 307 17 3 480 8 467 3.04e-29 120
MS.gene89852.t1 MTR_2g008225 34.562 217 118 4 241 452 243 440 3.29e-29 120
MS.gene89852.t1 MTR_5g040030 26.389 504 299 20 18 484 25 493 7.35e-29 119
MS.gene89852.t1 MTR_2g046620 33.624 229 127 5 239 461 237 446 1.46e-28 118
MS.gene89852.t1 MTR_7g039550 33.468 248 136 6 240 474 26 257 1.94e-28 114
MS.gene89852.t1 MTR_2086s0010 31.414 191 110 4 287 477 1 170 9.53e-28 109
MS.gene89852.t1 MTR_1996s0010 31.414 191 110 4 287 477 1 170 9.53e-28 109
MS.gene89852.t1 MTR_7g070760 33.019 212 91 5 211 414 32 200 3.21e-27 108
MS.gene89852.t1 MTR_6g036650 31.148 244 136 5 239 477 246 462 3.36e-27 114
MS.gene89852.t1 MTR_5g039900 33.333 234 129 6 250 474 264 479 4.80e-27 114
MS.gene89852.t1 MTR_7g080950 23.108 489 314 18 2 474 1 443 2.07e-26 112
MS.gene89852.t1 MTR_3g435310 34.314 204 111 5 253 452 210 394 2.29e-26 111
MS.gene89852.t1 MTR_4g059370 34.783 184 105 3 267 447 190 361 3.72e-25 107
MS.gene89852.t1 MTR_6g014185 28.938 273 135 10 210 477 125 343 8.51e-25 105
MS.gene89852.t1 MTR_5g090650 24.796 367 217 11 4 360 2 319 9.45e-25 105
MS.gene89852.t1 MTR_1g090270 34.010 197 115 4 246 442 245 426 8.15e-24 104
MS.gene89852.t1 MTR_4g079250 31.683 202 117 4 259 455 248 433 2.21e-23 103
MS.gene89852.t1 MTR_4g079270 30.317 221 121 5 240 455 241 433 6.73e-23 101
MS.gene89852.t1 MTR_8g056740 24.147 381 219 13 109 487 49 361 1.52e-22 99.8
MS.gene89852.t1 MTR_1g107325 30.588 170 110 3 309 477 189 351 4.90e-22 97.8
MS.gene89852.t1 MTR_2g014900 29.237 236 142 5 208 443 208 418 2.02e-21 97.1
MS.gene89852.t1 MTR_5g098960 31.020 245 132 8 212 450 212 425 2.77e-21 96.7
MS.gene89852.t1 MTR_5g066390 35.811 148 86 3 330 477 75 213 3.56e-21 92.4
MS.gene89852.t1 MTR_7g070995 35.156 128 75 2 355 474 13 140 1.05e-20 89.4
MS.gene89852.t1 MTR_6g014000 37.607 117 66 2 343 459 27 136 1.58e-20 94.7
MS.gene89852.t1 MTR_0536s0030 34.641 153 88 5 336 477 199 350 1.90e-19 90.1
MS.gene89852.t1 MTR_6g014160 25.000 352 184 14 112 441 103 396 3.34e-19 90.1
MS.gene89852.t1 MTR_2g083430 31.507 219 123 5 234 449 233 427 1.05e-18 89.0
MS.gene89852.t1 MTR_2g083380 33.333 219 119 6 234 449 250 444 4.05e-18 87.4
MS.gene89852.t1 MTR_2g083480 31.416 226 128 6 233 455 232 433 1.88e-17 85.1
MS.gene89852.t1 MTR_1g090280 30.769 156 96 2 287 442 133 276 2.29e-17 83.2
MS.gene89852.t1 MTR_6g052375 29.493 217 120 6 148 360 7 194 5.79e-17 82.4
MS.gene89852.t1 MTR_0184s0010 43.750 96 52 1 386 481 4 97 1.71e-16 75.5
MS.gene89852.t1 MTR_2g083490 33.333 219 119 6 234 449 233 427 3.44e-16 81.3
MS.gene89852.t1 MTR_2g083420 28.309 272 134 8 199 455 184 409 1.15e-15 79.3
MS.gene89852.t1 MTR_2g083390 34.400 125 80 2 332 455 286 409 2.13e-14 75.5
MS.gene89852.t1 MTR_0475s0030 37.143 70 38 1 365 434 11 74 1.75e-11 61.2
MS.gene89852.t1 MTR_2g086283 30.065 153 74 3 297 449 186 305 1.96e-11 65.9
MS.gene89852.t1 MTR_3g009500 26.937 271 167 11 5 258 3 259 8.39e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene89852.t1 AT3G50740 46.761 494 247 9 5 493 5 487 8.30e-156 452
MS.gene89852.t1 AT5G66690 45.041 484 247 8 5 484 5 473 1.95e-147 431
MS.gene89852.t1 AT5G26310 43.892 483 250 8 5 482 5 471 8.04e-145 424
MS.gene89852.t1 AT2G18570 42.977 477 256 7 7 480 5 468 9.09e-127 377
MS.gene89852.t1 AT4G36770 46.004 463 224 13 7 462 4 447 2.84e-125 373
MS.gene89852.t1 AT4G01070 40.756 476 264 8 3 475 4 464 6.01e-113 342
MS.gene89852.t1 AT1G01420 41.102 472 259 8 7 475 11 466 5.75e-108 330
MS.gene89852.t1 AT1G01420 41.102 472 259 8 7 475 8 463 5.86e-108 330
MS.gene89852.t1 AT1G01390 42.275 466 251 9 7 469 8 458 1.48e-105 323
MS.gene89852.t1 AT1G01390 42.275 466 251 9 7 469 25 475 2.04e-105 323
MS.gene89852.t1 AT2G18560 42.526 388 211 4 95 480 1 378 7.46e-103 313
MS.gene89852.t1 AT3G16520 30.720 472 302 8 9 476 7 457 2.98e-67 223
MS.gene89852.t1 AT4G15280 33.063 493 288 11 5 477 2 472 1.19e-66 222
MS.gene89852.t1 AT4G15280 33.063 493 288 11 5 477 34 504 2.55e-66 222
MS.gene89852.t1 AT3G21750 31.864 499 281 12 5 477 2 467 1.43e-65 219
MS.gene89852.t1 AT3G21760 31.961 510 278 16 5 477 2 479 2.19e-65 219
MS.gene89852.t1 AT3G21800 31.898 511 283 18 4 482 2 479 2.72e-65 219
MS.gene89852.t1 AT3G16520 30.719 459 293 8 9 463 7 444 5.41e-65 217
MS.gene89852.t1 AT3G16520 30.719 459 293 8 9 463 7 444 5.45e-65 217
MS.gene89852.t1 AT3G21790 31.337 501 291 15 5 477 2 477 1.10e-64 218
MS.gene89852.t1 AT1G07250 31.653 496 272 16 4 468 3 462 4.20e-64 216
MS.gene89852.t1 AT1G07260 32.649 487 266 15 9 467 8 460 1.29e-62 211
MS.gene89852.t1 AT2G29740 31.919 495 270 17 4 467 5 463 7.70e-62 209
MS.gene89852.t1 AT4G01070 37.356 348 202 7 3 347 4 338 2.16e-60 202
MS.gene89852.t1 AT2G29750 31.151 504 281 17 4 477 5 472 3.23e-60 205
MS.gene89852.t1 AT3G21780 32.064 499 280 18 5 477 2 467 1.45e-59 204
MS.gene89852.t1 AT4G15260 34.865 370 212 7 120 477 1 353 1.91e-59 200
MS.gene89852.t1 AT1G07240 33.071 508 261 20 9 477 7 474 6.87e-59 202
MS.gene89852.t1 AT2G29710 30.847 496 285 15 4 477 2 461 1.27e-58 201
MS.gene89852.t1 AT2G29730 29.006 493 298 13 4 477 2 461 1.41e-57 198
MS.gene89852.t1 AT2G15480 29.341 501 303 13 2 477 5 479 1.27e-52 185
MS.gene89852.t1 AT2G15490 29.283 502 304 13 1 477 1 476 2.05e-52 184
MS.gene89852.t1 AT2G15490 29.283 502 307 13 1 477 1 479 2.87e-52 184
MS.gene89852.t1 AT2G16890 31.225 506 265 17 7 477 9 466 5.87e-52 183
MS.gene89852.t1 AT2G15480 29.159 511 301 14 2 477 5 489 8.33e-52 183
MS.gene89852.t1 AT2G31790 29.065 492 286 15 3 474 4 452 4.44e-49 175
MS.gene89852.t1 AT4G34131 27.843 510 285 13 4 472 7 474 8.92e-49 175
MS.gene89852.t1 AT1G24100 30.185 487 290 14 5 476 9 460 9.43e-48 171
MS.gene89852.t1 AT5G59590 29.263 475 290 12 4 471 7 442 9.80e-48 171
MS.gene89852.t1 AT5G59580 29.424 469 286 12 5 467 7 436 1.20e-46 168
MS.gene89852.t1 AT1G10400 29.681 502 281 17 1 474 1 458 2.57e-46 168
MS.gene89852.t1 AT1G22360 29.216 510 280 20 2 471 5 473 5.77e-46 167
MS.gene89852.t1 AT5G12890 29.435 513 283 20 9 479 12 487 2.50e-45 166
MS.gene89852.t1 AT1G05675 27.686 484 303 10 2 474 1 448 3.03e-45 164
MS.gene89852.t1 AT2G16890 30.388 464 241 16 7 436 9 424 3.07e-45 164
MS.gene89852.t1 AT1G22400 30.020 503 273 23 3 467 9 470 5.07e-45 165
MS.gene89852.t1 AT1G78270 29.482 502 261 19 3 460 9 461 8.33e-45 164
MS.gene89852.t1 AT1G51210 28.298 470 263 18 3 452 16 431 1.08e-44 162
MS.gene89852.t1 AT1G05680 28.367 490 292 11 2 474 1 448 2.12e-44 162
MS.gene89852.t1 AT5G14860 27.006 511 307 17 2 479 3 480 2.32e-44 163
MS.gene89852.t1 AT5G03490 29.880 502 274 20 3 479 15 463 3.06e-44 162
MS.gene89852.t1 AT3G46690 27.651 481 301 14 4 476 6 447 4.12e-44 161
MS.gene89852.t1 AT2G36800 27.184 515 308 15 1 477 1 486 5.31e-44 162
MS.gene89852.t1 AT2G36770 27.326 516 307 17 1 477 1 487 8.51e-44 161
MS.gene89852.t1 AT2G36760 28.032 503 301 17 7 477 14 487 1.31e-43 161
MS.gene89852.t1 AT4G34138 34.752 282 148 6 211 480 223 480 2.15e-43 160
MS.gene89852.t1 AT1G22340 27.733 494 281 17 3 460 9 462 2.18e-43 160
MS.gene89852.t1 AT2G36970 25.255 491 304 13 3 467 6 459 6.03e-43 159
MS.gene89852.t1 AT5G17050 26.819 481 297 13 3 469 8 447 9.71e-43 158
MS.gene89852.t1 AT4G34135 28.480 467 269 15 4 438 8 441 1.87e-42 157
MS.gene89852.t1 AT3G46700 27.801 482 294 16 4 476 6 442 2.32e-42 156
MS.gene89852.t1 AT1G22380 28.370 497 271 17 4 460 10 461 5.51e-42 156
MS.gene89852.t1 AT3G53160 27.875 513 289 17 7 477 8 481 6.75e-42 156
MS.gene89852.t1 AT3G46680 28.067 481 299 15 2 474 4 445 1.29e-41 154
MS.gene89852.t1 AT2G43840 28.180 511 265 18 1 474 1 446 2.29e-41 154
MS.gene89852.t1 AT3G46660 29.158 487 281 16 5 474 12 451 4.44e-41 153
MS.gene89852.t1 AT2G43840 27.984 511 266 18 1 474 1 446 9.13e-41 152
MS.gene89852.t1 AT2G36780 26.782 519 306 19 1 477 1 487 1.17e-40 153
MS.gene89852.t1 AT2G36750 27.308 509 296 19 7 477 10 482 1.25e-39 150
MS.gene89852.t1 AT1G22360 28.039 510 274 20 2 471 5 461 2.08e-39 149
MS.gene89852.t1 AT2G30140 27.708 480 301 11 3 476 9 448 9.98e-39 147
MS.gene89852.t1 AT2G30140 27.651 481 301 11 3 476 9 449 1.19e-38 146
MS.gene89852.t1 AT2G36790 28.112 498 307 14 7 477 13 486 1.80e-38 147
MS.gene89852.t1 AT2G43820 27.475 495 273 17 1 468 1 436 3.31e-38 145
MS.gene89852.t1 AT3G53150 27.704 527 293 21 3 477 18 508 5.77e-38 145
MS.gene89852.t1 AT1G30530 27.061 473 289 14 8 469 14 441 1.69e-37 143
MS.gene89852.t1 AT3G46670 27.835 485 280 17 9 474 11 444 1.88e-37 143
MS.gene89852.t1 AT1G73880 27.572 486 287 18 5 467 12 455 2.30e-37 143
MS.gene89852.t1 AT3G46720 26.860 484 290 15 3 474 5 436 2.48e-37 142
MS.gene89852.t1 AT3G46650 29.451 455 252 19 5 449 8 403 1.48e-36 140
MS.gene89852.t1 AT5G17030 26.392 485 293 17 3 469 8 446 5.07e-36 139
MS.gene89852.t1 AT3G21560 24.950 497 308 16 7 476 12 470 5.23e-36 140
MS.gene89852.t1 AT1G22370 28.655 513 278 19 4 477 10 473 7.23e-36 139
MS.gene89852.t1 AT5G05880 33.473 239 135 5 239 474 227 444 8.23e-36 139
MS.gene89852.t1 AT4G15490 25.352 497 296 14 3 468 4 456 8.81e-36 139
MS.gene89852.t1 AT2G28080 32.143 280 156 8 195 470 213 462 1.39e-35 138
MS.gene89852.t1 AT3G55700 25.934 482 296 12 9 474 10 446 2.93e-35 137
MS.gene89852.t1 AT3G11340 32.028 281 161 6 197 474 187 440 3.78e-35 137
MS.gene89852.t1 AT5G65550 34.510 255 139 6 212 463 220 449 3.97e-35 137
MS.gene89852.t1 AT1G05560 26.489 487 301 15 7 477 5 450 1.43e-34 135
MS.gene89852.t1 AT2G31750 26.459 514 283 20 5 481 6 461 1.53e-34 135
MS.gene89852.t1 AT1G05560 26.327 490 298 16 7 477 55 500 2.30e-34 135
MS.gene89852.t1 AT5G17040 28.135 327 195 9 150 469 35 328 3.21e-34 132
MS.gene89852.t1 AT2G30150 26.694 487 293 15 7 477 13 451 3.35e-34 134
MS.gene89852.t1 AT2G31750 26.243 503 280 19 5 474 6 450 6.93e-34 133
MS.gene89852.t1 AT5G17040 27.548 363 217 10 114 469 107 430 8.83e-34 132
MS.gene89852.t1 AT5G05870 31.461 267 154 6 211 474 210 450 1.42e-33 132
MS.gene89852.t1 AT2G26480 33.333 237 136 3 241 474 224 441 2.30e-33 132
MS.gene89852.t1 AT2G30150 26.667 480 288 15 14 477 4 435 3.57e-33 131
MS.gene89852.t1 AT4G15480 25.840 476 315 12 7 469 19 469 3.78e-33 132
MS.gene89852.t1 AT1G22370 33.333 279 145 6 211 477 54 303 6.18e-33 127
MS.gene89852.t1 AT2G23260 26.369 493 297 16 4 477 7 452 8.76e-33 130
MS.gene89852.t1 AT4G15550 26.667 480 303 15 7 467 13 462 1.41e-32 130
MS.gene89852.t1 AT1G05530 26.860 484 304 17 7 476 5 452 2.19e-32 129
MS.gene89852.t1 AT3G55710 33.333 270 148 7 211 474 207 450 7.09e-32 127
MS.gene89852.t1 AT5G49690 31.633 294 145 8 187 454 168 431 8.52e-32 127
MS.gene89852.t1 AT5G05860 32.056 287 158 9 194 475 190 444 4.27e-31 125
MS.gene89852.t1 AT4G14090 25.880 483 293 15 4 468 10 445 6.40e-31 125
MS.gene89852.t1 AT1G06000 25.845 503 275 19 3 480 6 435 6.41e-31 124
MS.gene89852.t1 AT5G38010 24.297 498 299 15 4 476 7 451 9.82e-31 124
MS.gene89852.t1 AT4G15500 23.251 486 317 10 1 467 3 451 8.62e-30 122
MS.gene89852.t1 AT5G05890 32.381 210 122 3 265 474 259 448 1.95e-29 120
MS.gene89852.t1 AT5G38040 29.889 271 161 6 208 476 204 447 3.85e-29 119
MS.gene89852.t1 AT2G23250 31.900 279 149 8 209 477 187 434 4.59e-29 119
MS.gene89852.t1 AT2G22590 26.681 476 281 15 5 454 13 446 3.24e-28 117
MS.gene89852.t1 AT5G05900 30.483 269 144 6 212 474 212 443 2.15e-27 114
MS.gene89852.t1 AT4G27570 30.252 238 142 3 201 438 192 405 7.18e-26 110
MS.gene89852.t1 AT3G02100 30.822 292 141 10 195 473 211 454 1.14e-25 110
MS.gene89852.t1 AT4G27560 29.134 254 156 3 201 454 192 421 3.73e-25 108
MS.gene89852.t1 AT5G54010 24.208 442 293 12 2 438 1 405 2.46e-24 105
MS.gene89852.t1 AT1G64910 30.469 256 149 6 206 456 191 422 1.64e-23 103
MS.gene89852.t1 AT5G53990 29.752 242 146 4 197 438 182 399 4.21e-23 102
MS.gene89852.t1 AT3G29630 23.469 490 322 13 2 483 1 445 3.98e-21 96.3
MS.gene89852.t1 AT2G22930 25.175 286 188 4 197 482 182 441 4.63e-21 95.9
MS.gene89852.t1 AT5G37950 27.465 284 169 8 114 390 84 337 1.46e-20 93.2
MS.gene89852.t1 AT1G64920 23.305 472 292 14 2 455 1 420 2.47e-20 94.0
MS.gene89852.t1 AT4G09500 26.255 259 167 3 197 455 182 416 6.63e-20 92.4
MS.gene89852.t1 AT5G37950 27.304 293 164 10 114 390 84 343 8.81e-20 91.3
MS.gene89852.t1 AT3G22250 28.846 208 117 5 259 462 268 448 1.33e-19 91.7
MS.gene89852.t1 AT1G50580 24.615 455 279 17 2 442 1 405 1.51e-19 91.7
MS.gene89852.t1 AT5G54060 28.571 238 150 5 241 477 243 461 8.81e-19 89.4
MS.gene89852.t1 AT3G29630 28.899 218 138 3 266 483 219 419 1.18e-18 88.6
MS.gene89852.t1 AT4G09500 30.220 182 111 2 274 455 226 391 6.02e-18 86.3
MS.gene89852.t1 AT2G16890 26.667 330 184 13 7 305 9 311 4.16e-14 73.6
MS.gene89852.t1 AT2G16890 26.667 330 184 13 7 305 9 311 4.16e-14 73.6
MS.gene89852.t1 AT4G34135 24.398 332 216 11 4 312 8 327 1.08e-11 66.6

Find 154 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACCGCTTTCGATTCT+TGG 0.115382 5.3:+11181335 MS.gene89852:CDS
ATTAACCGTTGATGGGATTT+TGG 0.180078 5.3:+11181451 MS.gene89852:CDS
ACTAAGGCGGTTATTGAAAA+TGG 0.203582 5.3:+11181506 MS.gene89852:CDS
CTAATTCAATGGTGGGAATT+AGG 0.215918 5.3:-11180887 None:intergenic
TGGATTTGAAAGCGAATAAA+AGG 0.241328 5.3:-11181131 None:intergenic
ACAATGATGTCAAGGCTATT+AGG 0.244972 5.3:-11181020 None:intergenic
TGAGTCAGCAGCGGTTTATT+TGG 0.267362 5.3:+11181735 MS.gene89852:CDS
CGGATGGTGGTGTTGTTTGT+AGG 0.276202 5.3:+11182092 MS.gene89852:CDS
AATCCTAAGGATGGATTGTT+TGG 0.293527 5.3:-11181077 None:intergenic
AGTTAAAGTTAAGGAGTATA+AGG 0.296600 5.3:+11182174 MS.gene89852:CDS
AGATGGTTACGTCGAAATTA+TGG 0.302812 5.3:-11180929 None:intergenic
CTAATTCCCACCATTGAATT+AGG 0.314775 5.3:+11180888 MS.gene89852:CDS
TGAAACATTTGTTGCACCTT+GGG 0.317017 5.3:+11181388 MS.gene89852:CDS
GTTCTTATCGTGGATATCTT+TGG 0.337565 5.3:+11181176 MS.gene89852:CDS
CAAATGAGGGAGTTGGCTTA+TGG 0.346299 5.3:+11181704 MS.gene89852:CDS
TGCACCCGCAAAGTTGAAAA+AGG 0.349830 5.3:-11181795 None:intergenic
GAGTCAGCAGCGGTTTATTT+GGG 0.352412 5.3:+11181736 MS.gene89852:CDS
CAATGATGTCAAGGCTATTA+GGG 0.354503 5.3:-11181019 None:intergenic
TGCTTAAGCACCCCGAGCTT+TGG 0.361718 5.3:-11182296 None:intergenic
GAGGGAGTTGGCTTATGGTT+TGG 0.365288 5.3:+11181709 MS.gene89852:CDS
CTAAGGCGGTTATTGAAAAT+GGG 0.367692 5.3:+11181507 MS.gene89852:CDS
GGTGAACACGTGGCAAGATC+TGG 0.384639 5.3:+11181472 MS.gene89852:CDS
AGGGAAATATTAACCGTTGA+TGG 0.384981 5.3:+11181443 MS.gene89852:CDS
TCGGTGATATATTTGTCATT+TGG 0.385609 5.3:+11181656 MS.gene89852:CDS
CCATGCCAGGACTGGCTAGA+AGG 0.405790 5.3:-11180860 None:intergenic
ATTACAAATTGTTCTAATCA+TGG 0.407329 5.3:+11181097 MS.gene89852:CDS
TTCGATTCTTGGTTGTGAAT+CGG 0.408803 5.3:+11181346 MS.gene89852:CDS
TCACCGACTCAGCCGGTTGC+CGG 0.409864 5.3:-11181640 None:intergenic
AACAGATGGAGGATTCTTCA+TGG 0.417822 5.3:-11181156 None:intergenic
GATGAATGCAACTATGTTAT+CGG 0.427158 5.3:+11182030 MS.gene89852:CDS
ATGGAGGATTCTTCATGGAT+TGG 0.429228 5.3:-11181151 None:intergenic
TGCAGATGCACTGTCCTTTG+TGG 0.429431 5.3:-11181771 None:intergenic
TTGTGAATCGGTTCGATTTG+AGG 0.433122 5.3:+11181358 MS.gene89852:CDS
TGGATCTGAGGCCAAAGCTC+GGG 0.436672 5.3:+11182285 MS.gene89852:CDS
GTTAAGGAGTATAAGGTAAG+TGG 0.440214 5.3:+11182181 MS.gene89852:CDS
GAGTTGGCTTGACCGGCAAC+CGG 0.442794 5.3:+11181628 MS.gene89852:CDS
TAATGAAATGCTCTCTAAGA+TGG 0.452108 5.3:+11182234 MS.gene89852:CDS
GTTTCAATATCTCAGCTTGT+GGG 0.455969 5.3:-11181901 None:intergenic
ATCCTAAGGATGGATTGTTT+GGG 0.456888 5.3:-11181076 None:intergenic
TTGAAACATTTGTTGCACCT+TGG 0.462520 5.3:+11181387 MS.gene89852:CDS
GCAGATGCACTGTCCTTTGT+GGG 0.466049 5.3:-11181770 None:intergenic
CCTTCTAGCCAGTCCTGGCA+TGG 0.466820 5.3:+11180860 MS.gene89852:CDS
TCTGGAGCCAACAGCTACTA+AGG 0.469308 5.3:+11181490 MS.gene89852:CDS
AAGCCGTTTGCCTAATTCAA+TGG 0.470985 5.3:-11180898 None:intergenic
TCACTCTCACCATCCTTCTC+CGG 0.471841 5.3:-11181593 None:intergenic
GGATGGTGGTGTTGTTTGTA+GGG 0.472095 5.3:+11182093 MS.gene89852:CDS
TTCAACTTTGCGGGTGCAGA+TGG 0.473837 5.3:+11181800 MS.gene89852:CDS
AACTATGAGAGTTAAAGTTA+AGG 0.480148 5.3:+11182165 MS.gene89852:CDS
CTCAGCTTGTGGGGACCACA+TGG 0.482684 5.3:-11181891 None:intergenic
TAGAACAATTTGTAATCCTA+AGG 0.487043 5.3:-11181090 None:intergenic
GTGTTGGAGAGTATTCTTAA+CGG 0.492493 5.3:+11181968 MS.gene89852:CDS
AAAGGACCGGTTTATCCGAT+TGG 0.495178 5.3:+11181548 MS.gene89852:CDS
GTCACAAAACCACCCGTTGA+AGG 0.497281 5.3:-11181926 None:intergenic
AGCGGTCCAATCGGATAAAC+CGG 0.497350 5.3:-11181554 None:intergenic
GCTAGTAAGAACTGATGAAC+CGG 0.498920 5.3:+11181574 MS.gene89852:CDS
ACAATTTGTAATCCTAAGGA+TGG 0.503809 5.3:-11181086 None:intergenic
GACCCAAACAATCCATCCTT+AGG 0.507362 5.3:+11181074 MS.gene89852:CDS
GCAGTCCTTCTAGCCAGTCC+TGG 0.507678 5.3:+11180855 MS.gene89852:CDS
TATTTGTCATTTGGAAGTGG+TGG 0.510421 5.3:+11181665 MS.gene89852:CDS
GGAATTAGGTGTCCCATGCC+AGG 0.512529 5.3:-11180873 None:intergenic
TAGGTGTCCCATGCCAGGAC+TGG 0.514601 5.3:-11180868 None:intergenic
AAGGTGCAACAAATGTTTCA+AGG 0.516516 5.3:-11181385 None:intergenic
ATATTGAAACATCCTTCAAC+GGG 0.517633 5.3:+11181914 MS.gene89852:CDS
CATGTGCAACTCACGTGCCA+TGG 0.520206 5.3:-11181213 None:intergenic
CCACCATTGAATTAGGCAAA+CGG 0.521641 5.3:+11180895 MS.gene89852:CDS
TAAAGCGGCCATGCAACCAT+TGG 0.524368 5.3:-11181995 None:intergenic
GGGAAATATTAACCGTTGAT+GGG 0.526221 5.3:+11181444 MS.gene89852:CDS
TGGAAAGTTTGTGAAAGGAC+CGG 0.526779 5.3:+11181535 MS.gene89852:CDS
TGAATAGGACAAAAGAGGTA+GGG 0.527801 5.3:+11181858 MS.gene89852:CDS
ATATATTTGTCATTTGGAAG+TGG 0.528208 5.3:+11181662 MS.gene89852:CDS
TTGAATAGGACAAAAGAGGT+AGG 0.532740 5.3:+11181857 MS.gene89852:CDS
GAGCTTTGGCCTCAGATCCA+TGG 0.534593 5.3:-11182282 None:intergenic
TGACCGGCAACCGGCTGAGT+CGG 0.537830 5.3:+11181637 MS.gene89852:CDS
GGTTGCATGGCCGCTTTATG+CGG 0.540416 5.3:+11182000 MS.gene89852:CDS
ATTTGTCATTTGGAAGTGGT+GGG 0.540559 5.3:+11181666 MS.gene89852:CDS
TCAGCAGCGGTTTATTTGGG+TGG 0.541389 5.3:+11181739 MS.gene89852:CDS
CCTCATTTGACCTTCCGACA+TGG 0.544554 5.3:-11181690 None:intergenic
TATTCTTAACGGTGTTCCAA+TGG 0.546474 5.3:+11181979 MS.gene89852:CDS
TGTTTCAATATCTCAGCTTG+TGG 0.546693 5.3:-11181902 None:intergenic
GTTCTTACTAGCGGTCCAAT+CGG 0.553951 5.3:-11181563 None:intergenic
ACGGTGTTCCAATGGTTGCA+TGG 0.555117 5.3:+11181987 MS.gene89852:CDS
GATATTGAAACATCCTTCAA+CGG 0.555794 5.3:+11181913 MS.gene89852:CDS
CTTCATCTGTGATGAAAGGA+AGG 0.555836 5.3:-11181289 None:intergenic
GGTGGTGCGGCGACCCACAA+AGG 0.557701 5.3:+11181757 MS.gene89852:CDS
AACAGCAGTGAACCAAGCAT+TGG 0.558371 5.3:-11181258 None:intergenic
GCGGTTCATGATTCTTAGCA+TGG 0.558955 5.3:-11181322 None:intergenic
ATCTTCTGCTCCGCATAAAG+CGG 0.559382 5.3:-11182010 None:intergenic
AAATATATCACCGACTCAGC+CGG 0.559680 5.3:-11181647 None:intergenic
ATGGATCTGAGGCCAAAGCT+CGG 0.559727 5.3:+11182284 MS.gene89852:CDS
CCATGTCGGAAGGTCAAATG+AGG 0.560519 5.3:+11181690 MS.gene89852:CDS
GAAAGCGACGACGACGGTGG+CGG 0.560684 5.3:+11182072 MS.gene89852:CDS
CGTTTGCCTAATTCAATGGT+GGG 0.562353 5.3:-11180894 None:intergenic
ACGACGACGGTGGCGGATGG+TGG 0.562597 5.3:+11182079 MS.gene89852:CDS
ATGTGCAACTCACGTGCCAT+GGG 0.563691 5.3:-11181212 None:intergenic
AAGAACTGATGAACCGGAGA+AGG 0.565607 5.3:+11181580 MS.gene89852:CDS
CCGTTTGCCTAATTCAATGG+TGG 0.566551 5.3:-11180895 None:intergenic
CTTCTAGCCAGTCCTGGCAT+GGG 0.570142 5.3:+11180861 MS.gene89852:CDS
TGACATCATTGTAACACCTC+CGG 0.570544 5.3:+11181031 MS.gene89852:CDS
GGAAGGTCAAATGAGGGAGT+TGG 0.572490 5.3:+11181697 MS.gene89852:CDS
AAAGCTTCATCTGTGATGAA+AGG 0.573302 5.3:-11181293 None:intergenic
GCGACGACGACGGTGGCGGA+TGG 0.580167 5.3:+11182076 MS.gene89852:CDS
TCCTCCATCTGTTCTTATCG+TGG 0.582824 5.3:+11181166 MS.gene89852:CDS
GGCGGTTGTGACGACGAAGA+TGG 0.586383 5.3:-11180946 None:intergenic
TAAGGCGGTTATTGAAAATG+GGG 0.589730 5.3:+11181508 MS.gene89852:CDS
ATATCCACGATAAGAACAGA+TGG 0.592533 5.3:-11181170 None:intergenic
ATAACCGCCTTAGTAGCTGT+TGG 0.593391 5.3:-11181497 None:intergenic
AGGTGCAACAAATGTTTCAA+GGG 0.594651 5.3:-11181384 None:intergenic
TGGTGGATTACTTGCCAGAG+GGG 0.595312 5.3:+11181831 MS.gene89852:CDS
AGTTTGTTAGAGACATCGAC+CGG 0.597980 5.3:-11181050 None:intergenic
TTATCTCCACCATGGATCTG+AGG 0.598094 5.3:+11182273 MS.gene89852:CDS
ATCGGAGGAGCTTGGTGTGG+CGG 0.599179 5.3:+11182048 MS.gene89852:CDS
GGATCTGAGGCCAAAGCTCG+GGG 0.601971 5.3:+11182286 MS.gene89852:CDS
AAAGTTACGTTGAAGTCACA+AGG 0.605910 5.3:+11181423 MS.gene89852:CDS
AGCGGTTTATTTGGGTGGTG+CGG 0.610105 5.3:+11181744 MS.gene89852:CDS
GGAGGTGATTAGAAAAGTGA+TGG 0.612701 5.3:+11182126 MS.gene89852:CDS
ACTGATGAACCGGAGAAGGA+TGG 0.614409 5.3:+11181584 MS.gene89852:CDS
GAAACATTTGTTGCACCTTG+GGG 0.615035 5.3:+11181389 MS.gene89852:CDS
TGGTTACGTCGAAATTATGG+TGG 0.615047 5.3:-11180926 None:intergenic
CTGTGGTTGGAATTCTGTGT+TGG 0.615758 5.3:+11181952 MS.gene89852:CDS
TAGGGCTTTGTGTTCCCATG+TGG 0.616833 5.3:+11181876 MS.gene89852:CDS
AGTGGTGGGACCATGTCGGA+AGG 0.619154 5.3:+11181680 MS.gene89852:CDS
TTGAAACATCCTTCAACGGG+TGG 0.619390 5.3:+11181917 MS.gene89852:CDS
GTGGTGGATTACTTGCCAGA+GGG 0.621097 5.3:+11181830 MS.gene89852:CDS
TTTCAATATCTCAGCTTGTG+GGG 0.623184 5.3:-11181900 None:intergenic
ACTATGTTATCGGAGGAGCT+TGG 0.627208 5.3:+11182040 MS.gene89852:CDS
TGTGTATGAATCTGAGGTGG+CGG 0.627323 5.3:-11180964 None:intergenic
GGTTCATCAGTTCTTACTAG+CGG 0.632215 5.3:-11181572 None:intergenic
TACGTCGAAATTATGGTGGG+TGG 0.639276 5.3:-11180922 None:intergenic
TTGTAGGGAAAAGATAGCGG+AGG 0.640226 5.3:+11182108 MS.gene89852:CDS
TGTGAACTTTATCTCCACCA+TGG 0.642908 5.3:+11182265 MS.gene89852:CDS
TGTTTGTAGGGAAAAGATAG+CGG 0.645616 5.3:+11182105 MS.gene89852:CDS
TCCACGATAAGAACAGATGG+AGG 0.646989 5.3:-11181167 None:intergenic
GAGGTGTTACAATGATGTCA+AGG 0.652183 5.3:-11181028 None:intergenic
GTTATCGGAGGAGCTTGGTG+TGG 0.652369 5.3:+11182045 MS.gene89852:CDS
TGTTGTGTATGAATCTGAGG+TGG 0.653492 5.3:-11180967 None:intergenic
GGTGATTAGAAAAGTGATGG+TGG 0.654775 5.3:+11182129 MS.gene89852:CDS
TGGAAGTGGTGGGACCATGT+CGG 0.656190 5.3:+11181676 MS.gene89852:CDS
GTTTGGAGCTGAGTCAGCAG+CGG 0.661906 5.3:+11181726 MS.gene89852:CDS
GGTTACGTCGAAATTATGGT+GGG 0.666974 5.3:-11180925 None:intergenic
GTTCACCAAAATCCCATCAA+CGG 0.668646 5.3:-11181456 None:intergenic
GAATGCAACTATGTTATCGG+AGG 0.669481 5.3:+11182033 MS.gene89852:CDS
TGTGGTGGATTACTTGCCAG+AGG 0.671123 5.3:+11181829 MS.gene89852:CDS
TGCAGATGGAACAACTGTGG+TGG 0.673467 5.3:+11181814 MS.gene89852:CDS
AAAGTGATGGTGGATGAAGA+AGG 0.677276 5.3:+11182139 MS.gene89852:CDS
TCAGCTTGTGGGGACCACAT+GGG 0.680652 5.3:-11181890 None:intergenic
CTTTGGCCTCAGATCCATGG+TGG 0.682186 5.3:-11182279 None:intergenic
GGTGAAAGCGACGACGACGG+TGG 0.686396 5.3:+11182069 MS.gene89852:CDS
CATGTCGGAAGGTCAAATGA+GGG 0.688297 5.3:+11181691 MS.gene89852:CDS
TTGTTAGAGACATCGACCGG+AGG 0.691197 5.3:-11181047 None:intergenic
GGCGGTGAAAGCGACGACGA+CGG 0.696378 5.3:+11182066 MS.gene89852:CDS
TCACAACCAAGAATCGAAAG+CGG 0.707337 5.3:-11181341 None:intergenic
AAGTTACGTTGAAGTCACAA+GGG 0.708644 5.3:+11181424 MS.gene89852:CDS
GGAGCCAACAGCTACTAAGG+CGG 0.734831 5.3:+11181493 MS.gene89852:CDS
GGGTGCAGATGGAACAACTG+TGG 0.777902 5.3:+11181811 MS.gene89852:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACAAATTGTTCTAATCA+TGG + chr5.3:11181097-11181116 MS.gene89852:CDS 20.0%
!!! GTGAAAATTTAATTTTGAGT+TGG + chr5.3:11181612-11181631 MS.gene89852:CDS 20.0%
! AACTATGAGAGTTAAAGTTA+AGG + chr5.3:11182165-11182184 MS.gene89852:CDS 25.0%
! TAGAACAATTTGTAATCCTA+AGG - chr5.3:11181093-11181112 None:intergenic 25.0%
!! AGTTAAAGTTAAGGAGTATA+AGG + chr5.3:11182174-11182193 MS.gene89852:CDS 25.0%
!! ATATATTTGTCATTTGGAAG+TGG + chr5.3:11181662-11181681 MS.gene89852:CDS 25.0%
!! TCAACGTAACTTTTATGAAT+AGG - chr5.3:11181416-11181435 None:intergenic 25.0%
ACAATTTGTAATCCTAAGGA+TGG - chr5.3:11181089-11181108 None:intergenic 30.0%
ATATTGAAACATCCTTCAAC+GGG + chr5.3:11181914-11181933 MS.gene89852:CDS 30.0%
GATATTGAAACATCCTTCAA+CGG + chr5.3:11181913-11181932 MS.gene89852:CDS 30.0%
GATGAATGCAACTATGTTAT+CGG + chr5.3:11182030-11182049 MS.gene89852:CDS 30.0%
TCGGTGATATATTTGTCATT+TGG + chr5.3:11181656-11181675 MS.gene89852:CDS 30.0%
TGGATTTGAAAGCGAATAAA+AGG - chr5.3:11181134-11181153 None:intergenic 30.0%
! GTTATTGAAAATGGGGTTTT+TGG + chr5.3:11181515-11181534 MS.gene89852:CDS 30.0%
! GTTTTTGAATAGGACAAAAG+AGG + chr5.3:11181853-11181872 MS.gene89852:CDS 30.0%
! TAATGAAATGCTCTCTAAGA+TGG + chr5.3:11182234-11182253 MS.gene89852:CDS 30.0%
!! GTTTTTGGAAAGTTTGTGAA+AGG + chr5.3:11181530-11181549 MS.gene89852:CDS 30.0%
!! TTTTGTTGTGTATGAATCTG+AGG - chr5.3:11180973-11180992 None:intergenic 30.0%
AAAGCTTCATCTGTGATGAA+AGG - chr5.3:11181296-11181315 None:intergenic 35.0%
AAAGTTACGTTGAAGTCACA+AGG + chr5.3:11181423-11181442 MS.gene89852:CDS 35.0%
AAGGTGCAACAAATGTTTCA+AGG - chr5.3:11181388-11181407 None:intergenic 35.0%
AAGTTACGTTGAAGTCACAA+GGG + chr5.3:11181424-11181443 MS.gene89852:CDS 35.0%
ACAATGATGTCAAGGCTATT+AGG - chr5.3:11181023-11181042 None:intergenic 35.0%
ACTAAGGCGGTTATTGAAAA+TGG + chr5.3:11181506-11181525 MS.gene89852:CDS 35.0%
AGATGGTTACGTCGAAATTA+TGG - chr5.3:11180932-11180951 None:intergenic 35.0%
AGGGAAATATTAACCGTTGA+TGG + chr5.3:11181443-11181462 MS.gene89852:CDS 35.0%
AGGTGCAACAAATGTTTCAA+GGG - chr5.3:11181387-11181406 None:intergenic 35.0%
ATATCCACGATAAGAACAGA+TGG - chr5.3:11181173-11181192 None:intergenic 35.0%
CAATGATGTCAAGGCTATTA+GGG - chr5.3:11181022-11181041 None:intergenic 35.0%
CTAAGGCGGTTATTGAAAAT+GGG + chr5.3:11181507-11181526 MS.gene89852:CDS 35.0%
CTAATTCCCACCATTGAATT+AGG + chr5.3:11180888-11180907 MS.gene89852:CDS 35.0%
GGGAAATATTAACCGTTGAT+GGG + chr5.3:11181444-11181463 MS.gene89852:CDS 35.0%
GTTCTTATCGTGGATATCTT+TGG + chr5.3:11181176-11181195 MS.gene89852:CDS 35.0%
GTTTCAATATCTCAGCTTGT+GGG - chr5.3:11181904-11181923 None:intergenic 35.0%
TAAGGCGGTTATTGAAAATG+GGG + chr5.3:11181508-11181527 MS.gene89852:CDS 35.0%
TATTCTTAACGGTGTTCCAA+TGG + chr5.3:11181979-11181998 MS.gene89852:CDS 35.0%
TGAATAGGACAAAAGAGGTA+GGG + chr5.3:11181858-11181877 MS.gene89852:CDS 35.0%
TGTTTCAATATCTCAGCTTG+TGG - chr5.3:11181905-11181924 None:intergenic 35.0%
TGTTTGTAGGGAAAAGATAG+CGG + chr5.3:11182105-11182124 MS.gene89852:CDS 35.0%
TTCGATTCTTGGTTGTGAAT+CGG + chr5.3:11181346-11181365 MS.gene89852:CDS 35.0%
TTGAATAGGACAAAAGAGGT+AGG + chr5.3:11181857-11181876 MS.gene89852:CDS 35.0%
TTTCAATATCTCAGCTTGTG+GGG - chr5.3:11181903-11181922 None:intergenic 35.0%
! ATTTGTCATTTGGAAGTGGT+GGG + chr5.3:11181666-11181685 MS.gene89852:CDS 35.0%
! CTAATTCAATGGTGGGAATT+AGG - chr5.3:11180890-11180909 None:intergenic 35.0%
! GAAAAAGCTTTGTCTGAGTT+TGG + chr5.3:11182205-11182224 MS.gene89852:CDS 35.0%
! GTTAAGGAGTATAAGGTAAG+TGG + chr5.3:11182181-11182200 MS.gene89852:CDS 35.0%
! TATTTGTCATTTGGAAGTGG+TGG + chr5.3:11181665-11181684 MS.gene89852:CDS 35.0%
! TGAAACATTTGTTGCACCTT+GGG + chr5.3:11181388-11181407 MS.gene89852:CDS 35.0%
! TTGAAACATTTGTTGCACCT+TGG + chr5.3:11181387-11181406 MS.gene89852:CDS 35.0%
! TTTTCTTTGCAACCAATGCT+TGG + chr5.3:11181246-11181265 MS.gene89852:CDS 35.0%
!! AATCCTAAGGATGGATTGTT+TGG - chr5.3:11181080-11181099 None:intergenic 35.0%
!! ATCCTAAGGATGGATTGTTT+GGG - chr5.3:11181079-11181098 None:intergenic 35.0%
!! ATTAACCGTTGATGGGATTT+TGG + chr5.3:11181451-11181470 MS.gene89852:CDS 35.0%
!! GTGTTGGAGAGTATTCTTAA+CGG + chr5.3:11181968-11181987 MS.gene89852:CDS 35.0%
!!! AAGGACTGCATGAGTTTTTT+GGG - chr5.3:11180844-11180863 None:intergenic 35.0%
!!! TAATTTTGAGTTGGCTTGAC+CGG + chr5.3:11181621-11181640 MS.gene89852:CDS 35.0%
!!! TGCAACCTTTTTCAACTTTG+CGG + chr5.3:11181790-11181809 MS.gene89852:CDS 35.0%
AACAGATGGAGGATTCTTCA+TGG - chr5.3:11181159-11181178 None:intergenic 40.0%
AAGCCGTTTGCCTAATTCAA+TGG - chr5.3:11180901-11180920 None:intergenic 40.0%
ATGGAGGATTCTTCATGGAT+TGG - chr5.3:11181154-11181173 None:intergenic 40.0%
CCACCATTGAATTAGGCAAA+CGG + chr5.3:11180895-11180914 MS.gene89852:CDS 40.0%
CGTTTGCCTAATTCAATGGT+GGG - chr5.3:11180897-11180916 None:intergenic 40.0%
CTTCATCTGTGATGAAAGGA+AGG - chr5.3:11181292-11181311 None:intergenic 40.0%
GAATGCAACTATGTTATCGG+AGG + chr5.3:11182033-11182052 MS.gene89852:CDS 40.0%
GCTAGTAAGAACTGATGAAC+CGG + chr5.3:11181574-11181593 MS.gene89852:CDS 40.0%
GGAGGTGATTAGAAAAGTGA+TGG + chr5.3:11182126-11182145 MS.gene89852:CDS 40.0%
GGTGATTAGAAAAGTGATGG+TGG + chr5.3:11182129-11182148 MS.gene89852:CDS 40.0%
GGTTACGTCGAAATTATGGT+GGG - chr5.3:11180928-11180947 None:intergenic 40.0%
GGTTCATCAGTTCTTACTAG+CGG - chr5.3:11181575-11181594 None:intergenic 40.0%
GTTCACCAAAATCCCATCAA+CGG - chr5.3:11181459-11181478 None:intergenic 40.0%
TCACAACCAAGAATCGAAAG+CGG - chr5.3:11181344-11181363 None:intergenic 40.0%
TGACATCATTGTAACACCTC+CGG + chr5.3:11181031-11181050 MS.gene89852:CDS 40.0%
TGGAAAGTTTGTGAAAGGAC+CGG + chr5.3:11181535-11181554 MS.gene89852:CDS 40.0%
TGGTTACGTCGAAATTATGG+TGG - chr5.3:11180929-11180948 None:intergenic 40.0%
TGTGAACTTTATCTCCACCA+TGG + chr5.3:11182265-11182284 MS.gene89852:CDS 40.0%
TGTTGTGTATGAATCTGAGG+TGG - chr5.3:11180970-11180989 None:intergenic 40.0%
! CTTTTATGAATAGGTCCCCA+AGG - chr5.3:11181407-11181426 None:intergenic 40.0%
! GAAACATTTGTTGCACCTTG+GGG + chr5.3:11181389-11181408 MS.gene89852:CDS 40.0%
! GAGGTGTTACAATGATGTCA+AGG - chr5.3:11181031-11181050 None:intergenic 40.0%
!! AAAGTGATGGTGGATGAAGA+AGG + chr5.3:11182139-11182158 MS.gene89852:CDS 40.0%
!! AAATATATCACCGACTCAGC+CGG - chr5.3:11181650-11181669 None:intergenic 40.0%
!! AGTTTGTTAGAGACATCGAC+CGG - chr5.3:11181053-11181072 None:intergenic 40.0%
!! TTGTGAATCGGTTCGATTTG+AGG + chr5.3:11181358-11181377 MS.gene89852:CDS 40.0%
!!! GAAGGACTGCATGAGTTTTT+TGG - chr5.3:11180845-11180864 None:intergenic 40.0%
!!! GCAACCTTTTTCAACTTTGC+GGG + chr5.3:11181791-11181810 MS.gene89852:CDS 40.0%
AACAGCAGTGAACCAAGCAT+TGG - chr5.3:11181261-11181280 None:intergenic 45.0%
AAGAACTGATGAACCGGAGA+AGG + chr5.3:11181580-11181599 MS.gene89852:CDS 45.0%
ACTATGTTATCGGAGGAGCT+TGG + chr5.3:11182040-11182059 MS.gene89852:CDS 45.0%
ATAACCGCCTTAGTAGCTGT+TGG - chr5.3:11181500-11181519 None:intergenic 45.0%
ATCTTCTGCTCCGCATAAAG+CGG - chr5.3:11182013-11182032 None:intergenic 45.0%
CATGAACCGCTTTCGATTCT+TGG + chr5.3:11181335-11181354 MS.gene89852:CDS 45.0%
CATGTCGGAAGGTCAAATGA+GGG + chr5.3:11181691-11181710 MS.gene89852:CDS 45.0%
CCGTTTGCCTAATTCAATGG+TGG - chr5.3:11180898-11180917 None:intergenic 45.0%
CTGTGGTTGGAATTCTGTGT+TGG + chr5.3:11181952-11181971 MS.gene89852:CDS 45.0%
GACCCAAACAATCCATCCTT+AGG + chr5.3:11181074-11181093 MS.gene89852:CDS 45.0%
GAGTCAGCAGCGGTTTATTT+GGG + chr5.3:11181736-11181755 MS.gene89852:CDS 45.0%
GCGGTTCATGATTCTTAGCA+TGG - chr5.3:11181325-11181344 None:intergenic 45.0%
GTCCTATTCAAAAACCCCTC+TGG - chr5.3:11181848-11181867 None:intergenic 45.0%
GTTCTTACTAGCGGTCCAAT+CGG - chr5.3:11181566-11181585 None:intergenic 45.0%
TCCACGATAAGAACAGATGG+AGG - chr5.3:11181170-11181189 None:intergenic 45.0%
TCCTCCATCTGTTCTTATCG+TGG + chr5.3:11181166-11181185 MS.gene89852:CDS 45.0%
TGAGTCAGCAGCGGTTTATT+TGG + chr5.3:11181735-11181754 MS.gene89852:CDS 45.0%
TGCACCCGCAAAGTTGAAAA+AGG - chr5.3:11181798-11181817 None:intergenic 45.0%
TTATCTCCACCATGGATCTG+AGG + chr5.3:11182273-11182292 MS.gene89852:CDS 45.0%
TTGAAACATCCTTCAACGGG+TGG + chr5.3:11181917-11181936 MS.gene89852:CDS 45.0%
! AAAGGACCGGTTTATCCGAT+TGG + chr5.3:11181548-11181567 MS.gene89852:CDS 45.0%
! CAAATGAGGGAGTTGGCTTA+TGG + chr5.3:11181704-11181723 MS.gene89852:CDS 45.0%
! GTTTTGTGACACACTGTGGT+TGG + chr5.3:11181939-11181958 MS.gene89852:CDS 45.0%
! TACGTCGAAATTATGGTGGG+TGG - chr5.3:11180925-11180944 None:intergenic 45.0%
! TGCCAGAGGGGTTTTTGAAT+AGG + chr5.3:11181843-11181862 MS.gene89852:CDS 45.0%
! TGTGTATGAATCTGAGGTGG+CGG - chr5.3:11180967-11180986 None:intergenic 45.0%
! TTGTAGGGAAAAGATAGCGG+AGG + chr5.3:11182108-11182127 MS.gene89852:CDS 45.0%
!! ATGGGATTTTGGTGAACACG+TGG + chr5.3:11181462-11181481 MS.gene89852:CDS 45.0%
!! GGATGGTGGTGTTGTTTGTA+GGG + chr5.3:11182093-11182112 MS.gene89852:CDS 45.0%
ACGGTGTTCCAATGGTTGCA+TGG + chr5.3:11181987-11182006 MS.gene89852:CDS 50.0%
ACTGATGAACCGGAGAAGGA+TGG + chr5.3:11181584-11181603 MS.gene89852:CDS 50.0%
AGCGGTCCAATCGGATAAAC+CGG - chr5.3:11181557-11181576 None:intergenic 50.0%
AGCGGTTTATTTGGGTGGTG+CGG + chr5.3:11181744-11181763 MS.gene89852:CDS 50.0%
ATGTGCAACTCACGTGCCAT+GGG - chr5.3:11181215-11181234 None:intergenic 50.0%
CCATGTCGGAAGGTCAAATG+AGG + chr5.3:11181690-11181709 MS.gene89852:CDS 50.0%
CCTCATTTGACCTTCCGACA+TGG - chr5.3:11181693-11181712 None:intergenic 50.0%
GCAGATGCACTGTCCTTTGT+GGG - chr5.3:11181773-11181792 None:intergenic 50.0%
GGAAGGTCAAATGAGGGAGT+TGG + chr5.3:11181697-11181716 MS.gene89852:CDS 50.0%
GTCACAAAACCACCCGTTGA+AGG - chr5.3:11181929-11181948 None:intergenic 50.0%
TAAAGCGGCCATGCAACCAT+TGG - chr5.3:11181998-11182017 None:intergenic 50.0%
TCACTCTCACCATCCTTCTC+CGG - chr5.3:11181596-11181615 None:intergenic 50.0%
TCAGCAGCGGTTTATTTGGG+TGG + chr5.3:11181739-11181758 MS.gene89852:CDS 50.0%
TGCAGATGCACTGTCCTTTG+TGG - chr5.3:11181774-11181793 None:intergenic 50.0%
TGCAGATGGAACAACTGTGG+TGG + chr5.3:11181814-11181833 MS.gene89852:CDS 50.0%
TTCAACTTTGCGGGTGCAGA+TGG + chr5.3:11181800-11181819 MS.gene89852:CDS 50.0%
TTGTTAGAGACATCGACCGG+AGG - chr5.3:11181050-11181069 None:intergenic 50.0%
! ATGGATCTGAGGCCAAAGCT+CGG + chr5.3:11182284-11182303 MS.gene89852:CDS 50.0%
! GAGGGAGTTGGCTTATGGTT+TGG + chr5.3:11181709-11181728 MS.gene89852:CDS 50.0%
! TAGGGCTTTGTGTTCCCATG+TGG + chr5.3:11181876-11181895 MS.gene89852:CDS 50.0%
! TCTGGAGCCAACAGCTACTA+AGG + chr5.3:11181490-11181509 MS.gene89852:CDS 50.0%
! TGGTACTGCAGCTTTTCCCA+TGG + chr5.3:11181196-11181215 MS.gene89852:CDS 50.0%
!! CGGATGGTGGTGTTGTTTGT+AGG + chr5.3:11182092-11182111 MS.gene89852:CDS 50.0%
!! GTGGTGGATTACTTGCCAGA+GGG + chr5.3:11181830-11181849 MS.gene89852:CDS 50.0%
!! TGGTGGATTACTTGCCAGAG+GGG + chr5.3:11181831-11181850 MS.gene89852:CDS 50.0%
!! TGTGGTGGATTACTTGCCAG+AGG + chr5.3:11181829-11181848 MS.gene89852:CDS 50.0%
!!! GGTGGTTTTGTGACACACTG+TGG + chr5.3:11181935-11181954 MS.gene89852:CDS 50.0%
CATGTGCAACTCACGTGCCA+TGG - chr5.3:11181216-11181235 None:intergenic 55.0%
CTTCTAGCCAGTCCTGGCAT+GGG + chr5.3:11180861-11180880 MS.gene89852:CDS 55.0%
CTTTGGCCTCAGATCCATGG+TGG - chr5.3:11182282-11182301 None:intergenic 55.0%
GGAATTAGGTGTCCCATGCC+AGG - chr5.3:11180876-11180895 None:intergenic 55.0%
GGAGCCAACAGCTACTAAGG+CGG + chr5.3:11181493-11181512 MS.gene89852:CDS 55.0%
GGGTGCAGATGGAACAACTG+TGG + chr5.3:11181811-11181830 MS.gene89852:CDS 55.0%
GGTGAACACGTGGCAAGATC+TGG + chr5.3:11181472-11181491 MS.gene89852:CDS 55.0%
TCAGCTTGTGGGGACCACAT+GGG - chr5.3:11181893-11181912 None:intergenic 55.0%
! GAGCTTTGGCCTCAGATCCA+TGG - chr5.3:11182285-11182304 None:intergenic 55.0%
! GGTTGCATGGCCGCTTTATG+CGG + chr5.3:11182000-11182019 MS.gene89852:CDS 55.0%
! GTTATCGGAGGAGCTTGGTG+TGG + chr5.3:11182045-11182064 MS.gene89852:CDS 55.0%
! GTTTGGAGCTGAGTCAGCAG+CGG + chr5.3:11181726-11181745 MS.gene89852:CDS 55.0%
! TGGAAGTGGTGGGACCATGT+CGG + chr5.3:11181676-11181695 MS.gene89852:CDS 55.0%
! TGGATCTGAGGCCAAAGCTC+GGG + chr5.3:11182285-11182304 MS.gene89852:CDS 55.0%
CCTTCTAGCCAGTCCTGGCA+TGG + chr5.3:11180860-11180879 MS.gene89852:CDS 60.0%
CTCAGCTTGTGGGGACCACA+TGG - chr5.3:11181894-11181913 None:intergenic 60.0%
GCAGTCCTTCTAGCCAGTCC+TGG + chr5.3:11180855-11180874 MS.gene89852:CDS 60.0%
GGCGGTTGTGACGACGAAGA+TGG - chr5.3:11180949-11180968 None:intergenic 60.0%
TAGGTGTCCCATGCCAGGAC+TGG - chr5.3:11180871-11180890 None:intergenic 60.0%
! AGTGGTGGGACCATGTCGGA+AGG + chr5.3:11181680-11181699 MS.gene89852:CDS 60.0%
! GGATCTGAGGCCAAAGCTCG+GGG + chr5.3:11182286-11182305 MS.gene89852:CDS 60.0%
!! ATCGGAGGAGCTTGGTGTGG+CGG + chr5.3:11182048-11182067 MS.gene89852:CDS 60.0%
!! CCATGCCAGGACTGGCTAGA+AGG - chr5.3:11180863-11180882 None:intergenic 60.0%
!! GAGTTGGCTTGACCGGCAAC+CGG + chr5.3:11181628-11181647 MS.gene89852:CDS 60.0%
GAAAGCGACGACGACGGTGG+CGG + chr5.3:11182072-11182091 MS.gene89852:CDS 65.0%
GGCGGTGAAAGCGACGACGA+CGG + chr5.3:11182066-11182085 MS.gene89852:CDS 65.0%
GGTGAAAGCGACGACGACGG+TGG + chr5.3:11182069-11182088 MS.gene89852:CDS 65.0%
TGACCGGCAACCGGCTGAGT+CGG + chr5.3:11181637-11181656 MS.gene89852:CDS 65.0%
!! TCACCGACTCAGCCGGTTGC+CGG - chr5.3:11181643-11181662 None:intergenic 65.0%
GGTGGTGCGGCGACCCACAA+AGG + chr5.3:11181757-11181776 MS.gene89852:CDS 70.0%
!! ACGACGACGGTGGCGGATGG+TGG + chr5.3:11182079-11182098 MS.gene89852:CDS 70.0%
!! GCGACGACGACGGTGGCGGA+TGG + chr5.3:11182076-11182095 MS.gene89852:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 11180834 11182315 11180834 ID=MS.gene89852
chr5.3 mRNA 11180834 11182315 11180834 ID=MS.gene89852.t1;Parent=MS.gene89852
chr5.3 exon 11180834 11182315 11180834 ID=MS.gene89852.t1.exon1;Parent=MS.gene89852.t1
chr5.3 CDS 11180834 11182315 11180834 ID=cds.MS.gene89852.t1;Parent=MS.gene89852.t1
Gene Sequence

>MS.gene89852

ATGGTGTCCCAAAAAACTCATGCAGTCCTTCTAGCCAGTCCTGGCATGGGACACCTAATTCCCACCATTGAATTAGGCAAACGGCTTACCACCCACCATAATTTCGACGTAACCATCTTCGTCGTCACAACCGCCACCTCAGATTCATACACAACAAAATCACATATACTTCAACAAGTATCAAACCCTAATAGCCTTGACATCATTGTAACACCTCCGGTCGATGTCTCTAACAAACTTGACCCAAACAATCCATCCTTAGGATTACAAATTGTTCTAATCATGGTTGAATCTCTTCCTTTTATTCGCTTTCAAATCCAATCCATGAAGAATCCTCCATCTGTTCTTATCGTGGATATCTTTGGTACTGCAGCTTTTCCCATGGCACGTGAGTTGCACATGTCGAGTTACGTTTTCTTTGCAACCAATGCTTGGTTCACTGCTGTTAACTTATACCTTCCTTTCATCACAGATGAAGCTTTTTCACGCCATGCTAAGAATCATGAACCGCTTTCGATTCTTGGTTGTGAATCGGTTCGATTTGAGGATACCCTTGAAACATTTGTTGCACCTTGGGGACCTATTCATAAAAGTTACGTTGAAGTCACAAGGGAAATATTAACCGTTGATGGGATTTTGGTGAACACGTGGCAAGATCTGGAGCCAACAGCTACTAAGGCGGTTATTGAAAATGGGGTTTTTGGAAAGTTTGTGAAAGGACCGGTTTATCCGATTGGACCGCTAGTAAGAACTGATGAACCGGAGAAGGATGGTGAGAGTGAAAATTTAATTTTGAGTTGGCTTGACCGGCAACCGGCTGAGTCGGTGATATATTTGTCATTTGGAAGTGGTGGGACCATGTCGGAAGGTCAAATGAGGGAGTTGGCTTATGGTTTGGAGCTGAGTCAGCAGCGGTTTATTTGGGTGGTGCGGCGACCCACAAAGGACAGTGCATCTGCAACCTTTTTCAACTTTGCGGGTGCAGATGGAACAACTGTGGTGGATTACTTGCCAGAGGGGTTTTTGAATAGGACAAAAGAGGTAGGGCTTTGTGTTCCCATGTGGTCCCCACAAGCTGAGATATTGAAACATCCTTCAACGGGTGGTTTTGTGACACACTGTGGTTGGAATTCTGTGTTGGAGAGTATTCTTAACGGTGTTCCAATGGTTGCATGGCCGCTTTATGCGGAGCAGAAGATGAATGCAACTATGTTATCGGAGGAGCTTGGTGTGGCGGTGAAAGCGACGACGACGGTGGCGGATGGTGGTGTTGTTTGTAGGGAAAAGATAGCGGAGGTGATTAGAAAAGTGATGGTGGATGAAGAAGGTGTAACTATGAGAGTTAAAGTTAAGGAGTATAAGGTAAGTGGAGAAAAAGCTTTGTCTGAGTTTGGTTCTTCTAATGAAATGCTCTCTAAGATGGCAAAAGATTGTGAACTTTATCTCCACCATGGATCTGAGGCCAAAGCTCGGGGTGCTTAA
Protein sequence

>MS.gene89852.t1

MVSQKTHAVLLASPGMGHLIPTIELGKRLTTHHNFDVTIFVVTTATSDSYTTKSHILQQVSNPNSLDIIVTPPVDVSNKLDPNNPSLGLQIVLIMVESLPFIRFQIQSMKNPPSVLIVDIFGTAAFPMARELHMSSYVFFATNAWFTAVNLYLPFITDEAFSRHAKNHEPLSILGCESVRFEDTLETFVAPWGPIHKSYVEVTREILTVDGILVNTWQDLEPTATKAVIENGVFGKFVKGPVYPIGPLVRTDEPEKDGESENLILSWLDRQPAESVIYLSFGSGGTMSEGQMRELAYGLELSQQRFIWVVRRPTKDSASATFFNFAGADGTTVVDYLPEGFLNRTKEVGLCVPMWSPQAEILKHPSTGGFVTHCGWNSVLESILNGVPMVAWPLYAEQKMNATMLSEELGVAVKATTTVADGGVVCREKIAEVIRKVMVDEEGVTMRVKVKEYKVSGEKALSEFGSSNEMLSKMAKDCELYLHHGSEAKARGA