Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049037.t1 | XP_003630669.1 | 97.6 | 548 | 13 | 0 | 14 | 561 | 4 | 551 | 1.40E-294 | 1021.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049037.t1 | Q9SW96 | 71.2 | 549 | 156 | 1 | 15 | 561 | 24 | 572 | 1.6e-233 | 810.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049037.t1 | G7LJN2 | 97.6 | 548 | 13 | 0 | 14 | 561 | 4 | 551 | 1.0e-294 | 1021.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049037 | MS.gene070511 | PPI |
| MS.gene070492 | MS.gene049037 | PPI |
| MS.gene049037 | MS.gene057884 | PPI |
| MS.gene81622 | MS.gene049037 | PPI |
| MS.gene016743 | MS.gene049037 | PPI |
| MS.gene057883 | MS.gene049037 | PPI |
| MS.gene016742 | MS.gene049037 | PPI |
| MS.gene070510 | MS.gene049037 | PPI |
| MS.gene049037 | MS.gene67840 | PPI |
| MS.gene81617 | MS.gene049037 | PPI |
| MS.gene37911 | MS.gene049037 | PPI |
| MS.gene070509 | MS.gene049037 | PPI |
| MS.gene81620 | MS.gene049037 | PPI |
| MS.gene070505 | MS.gene049037 | PPI |
| MS.gene057886 | MS.gene049037 | PPI |
| MS.gene81615 | MS.gene049037 | PPI |
| MS.gene070503 | MS.gene049037 | PPI |
| MS.gene049037 | MS.gene016758 | PPI |
| MS.gene070507 | MS.gene049037 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049037.t1 | MTR_8g102050 | 97.993 | 548 | 11 | 0 | 14 | 561 | 4 | 551 | 0.0 | 1114 |
| MS.gene049037.t1 | MTR_7g101050 | 88.946 | 579 | 43 | 7 | 1 | 561 | 1 | 576 | 0.0 | 1031 |
| MS.gene049037.t1 | MTR_8g011530 | 46.369 | 537 | 280 | 5 | 25 | 560 | 103 | 632 | 1.66e-169 | 495 |
| MS.gene049037.t1 | MTR_4g100920 | 48.502 | 534 | 202 | 9 | 33 | 561 | 81 | 546 | 2.65e-167 | 486 |
| MS.gene049037.t1 | MTR_4g100920 | 61.453 | 179 | 65 | 2 | 279 | 456 | 266 | 441 | 6.41e-69 | 229 |
| MS.gene049037.t1 | MTR_4g100920 | 47.159 | 176 | 85 | 4 | 33 | 204 | 81 | 252 | 4.78e-43 | 160 |
| MS.gene049037.t1 | MTR_1g014140 | 30.605 | 281 | 175 | 8 | 285 | 558 | 271 | 538 | 1.10e-27 | 117 |
| MS.gene049037.t1 | MTR_5g028360 | 30.605 | 281 | 175 | 9 | 285 | 558 | 319 | 586 | 1.66e-27 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049037.t1 | AT5G56680 | 73.866 | 551 | 142 | 1 | 13 | 561 | 22 | 572 | 0.0 | 879 |
| MS.gene049037.t1 | AT1G70980 | 71.150 | 565 | 155 | 5 | 2 | 561 | 10 | 571 | 0.0 | 843 |
| MS.gene049037.t1 | AT4G17300 | 46.995 | 549 | 219 | 9 | 18 | 561 | 86 | 567 | 6.06e-167 | 486 |
| MS.gene049037.t1 | AT4G17300 | 46.995 | 549 | 219 | 9 | 18 | 561 | 106 | 587 | 1.23e-166 | 486 |
| MS.gene049037.t1 | AT3G07420 | 47.628 | 506 | 251 | 7 | 61 | 560 | 140 | 637 | 1.15e-165 | 485 |
| MS.gene049037.t1 | AT3G07420 | 44.935 | 385 | 198 | 7 | 61 | 439 | 140 | 516 | 7.08e-109 | 336 |
| MS.gene049037.t1 | AT4G31180 | 31.317 | 281 | 173 | 8 | 285 | 558 | 288 | 555 | 2.12e-28 | 119 |
| MS.gene049037.t1 | AT4G31180 | 31.317 | 281 | 173 | 8 | 285 | 558 | 288 | 555 | 2.12e-28 | 119 |
| MS.gene049037.t1 | AT1G68420 | 63.636 | 77 | 28 | 0 | 315 | 391 | 1 | 77 | 5.53e-28 | 107 |
| MS.gene049037.t1 | AT4G26870 | 29.242 | 277 | 176 | 9 | 285 | 554 | 262 | 525 | 3.26e-26 | 112 |
| MS.gene049037.t1 | AT5G38750 | 35.570 | 149 | 51 | 5 | 26 | 169 | 19 | 127 | 2.27e-15 | 73.6 |
Find 139 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGAGGATATGGAATTTA+TGG | 0.136941 | 4.1:-3380110 | MS.gene049037:CDS |
| CCAGGCATTTGGCTGAATTT+TGG | 0.190908 | 4.1:-3380485 | MS.gene049037:CDS |
| TAGAATGCTTTGATTTCTTT+TGG | 0.211540 | 4.1:+3379669 | None:intergenic |
| TTTCAGGTTGGAGAGTTAAT+TGG | 0.238466 | 4.1:-3379320 | MS.gene049037:intron |
| CCTCGGTTACGGTGGATAAT+TGG | 0.242154 | 4.1:+3381875 | None:intergenic |
| AATTTGAGAAAGAAGTAAAA+TGG | 0.264571 | 4.1:-3379967 | MS.gene049037:CDS |
| AGCTGCTAAGCTTGTTGTTC+AGG | 0.277489 | 4.1:-3380802 | MS.gene049037:CDS |
| TGACAACTGCCTTGAGGATA+TGG | 0.287783 | 4.1:-3380119 | MS.gene049037:CDS |
| GAAGCTTACCGTGTTGGTTC+TGG | 0.296078 | 4.1:+3381444 | None:intergenic |
| TTCAGGTTGGAGAGTTAATT+GGG | 0.300812 | 4.1:-3379319 | MS.gene049037:intron |
| CATCTCAAACTTCCTCCTTC+TGG | 0.307642 | 4.1:-3381595 | MS.gene049037:CDS |
| TTGCATTGATCGTTTGAAAA+TGG | 0.308329 | 4.1:-3380068 | MS.gene049037:CDS |
| TTCTCACACTTCCAGGCATT+TGG | 0.323004 | 4.1:-3380496 | MS.gene049037:CDS |
| GACGCTTCGCTTGCTGATCT+TGG | 0.338136 | 4.1:-3381658 | MS.gene049037:CDS |
| AAGTCTGCAAACGCAATTTC+AGG | 0.340094 | 4.1:+3380453 | None:intergenic |
| GATCGAGCTTCGCGCTGAAC+AGG | 0.346443 | 4.1:-3381560 | MS.gene049037:CDS |
| CCATAGCAGCCACTGTCTTT+AGG | 0.350322 | 4.1:+3379628 | None:intergenic |
| ATGTTACAGACTAGAGGATA+TGG | 0.353962 | 4.1:-3379124 | MS.gene049037:intron |
| CAGAGAATTCTCACACTTCC+AGG | 0.362661 | 4.1:-3380503 | MS.gene049037:CDS |
| TGAAATTGCGTTTGCAGACT+TGG | 0.364314 | 4.1:-3380451 | MS.gene049037:CDS |
| TCTGATACTTCACCTCTGTT+AGG | 0.364762 | 4.1:+3379715 | None:intergenic |
| CGCCGTGAAGACGGCGGATC+AGG | 0.364782 | 4.1:-3381805 | MS.gene049037:CDS |
| ATGGCCGACAAGTTTGATAA+AGG | 0.367425 | 4.1:-3380091 | MS.gene049037:CDS |
| TACAGAAGCTGTGGAAATAC+TGG | 0.367791 | 4.1:-3380014 | MS.gene049037:CDS |
| ATTTGAGAAAGAAGTAAAAT+GGG | 0.373720 | 4.1:-3379966 | MS.gene049037:CDS |
| AAAGGCGAAAGCGTCCTTAT+CGG | 0.375770 | 4.1:+3381729 | None:intergenic |
| GACGATAACTTGAAGGTTAC+CGG | 0.386145 | 4.1:+3381681 | None:intergenic |
| TACCATTCATATGGCTCAAC+AGG | 0.392016 | 4.1:+3379096 | None:intergenic |
| CTTAGTCGCGTGTATACATT+TGG | 0.394717 | 4.1:-3380540 | MS.gene049037:CDS |
| GGATATTTAGCAGGATCAAC+AGG | 0.402646 | 4.1:+3381523 | None:intergenic |
| TCCGTCCTTTCGAGGAATAC+CGG | 0.412212 | 4.1:+3380650 | None:intergenic |
| TTCAAAGCCAAGACCGAATC+CGG | 0.420519 | 4.1:+3379038 | None:intergenic |
| CAAGGATTCAAGAGTGAGTC+TGG | 0.425712 | 4.1:+3381489 | None:intergenic |
| TCCGTCGTTCAATTCCAAAA+AGG | 0.425770 | 4.1:+3381711 | None:intergenic |
| GCTGTCGGAGAATTCAGCTT+TGG | 0.429447 | 4.1:+3381849 | None:intergenic |
| TATCTGCTGTTGCTCGGATT+CGG | 0.429555 | 4.1:-3381016 | MS.gene049037:CDS |
| CATCATAACGCTCCTCCCTT+TGG | 0.431653 | 4.1:+3379291 | None:intergenic |
| AAACATGCCGGATTCGGTCT+TGG | 0.433671 | 4.1:-3379045 | MS.gene049037:CDS |
| TCCACCTTTCCGTCCTTTCG+AGG | 0.434861 | 4.1:+3380642 | None:intergenic |
| CTGTCGGAGAATTCAGCTTT+GGG | 0.435015 | 4.1:+3381850 | None:intergenic |
| ACAGTGAAACATGCCGGATT+CGG | 0.441656 | 4.1:-3379051 | MS.gene049037:CDS |
| CAATCACTAGTGGTGACAAT+TGG | 0.443292 | 4.1:+3380930 | None:intergenic |
| AGCTTTGGGAACCTCGGTTA+CGG | 0.446521 | 4.1:+3381864 | None:intergenic |
| CCAAAATTCAGCCAAATGCC+TGG | 0.449352 | 4.1:+3380485 | None:intergenic |
| CCTAAAGACAGTGGCTGCTA+TGG | 0.464078 | 4.1:-3379628 | MS.gene049037:CDS |
| GCAACCTTTATCAAACTTGT+CGG | 0.464855 | 4.1:+3380087 | None:intergenic |
| TCACTGTTCCATACCGCCTC+AGG | 0.466762 | 4.1:+3379067 | None:intergenic |
| AACCTGATCCGCCGTCTTCA+CGG | 0.469954 | 4.1:+3381803 | None:intergenic |
| GATTCGGTCTTGGCTTTGAA+AGG | 0.469967 | 4.1:-3379035 | MS.gene049037:CDS |
| CCGTCCTTTCGAGGAATACC+GGG | 0.472290 | 4.1:+3380651 | None:intergenic |
| GCCGTCTTCACGGCGGATGA+TGG | 0.473112 | 4.1:+3381813 | None:intergenic |
| CAGGCAAGAAAGCAAGAATC+GGG | 0.476509 | 4.1:-3381777 | MS.gene049037:CDS |
| TGTAGATCTTTCCACCAGCT+TGG | 0.481572 | 4.1:+3380680 | None:intergenic |
| ATTCCCTTCCCACGATATCC+TGG | 0.485303 | 4.1:-3378970 | MS.gene049037:CDS |
| AGGTCAATGTACCATTCATA+TGG | 0.485564 | 4.1:+3379087 | None:intergenic |
| AACCGGAAGAAAAGCCGATA+AGG | 0.487481 | 4.1:-3381743 | MS.gene049037:CDS |
| TGTATATGTAAGTCGAATGA+AGG | 0.488290 | 4.1:+3380033 | None:intergenic |
| GTTCAGTGAAGCAGAGAGGT+TGG | 0.488710 | 4.1:-3380871 | MS.gene049037:CDS |
| TTAGGCAAAGGATATTTAGC+AGG | 0.489337 | 4.1:+3381514 | None:intergenic |
| TCAACATCAGCTTCAGTTGG+AGG | 0.491857 | 4.1:+3380825 | None:intergenic |
| AAGCTTGTTGTTCAGGAGAA+GGG | 0.495167 | 4.1:-3380795 | MS.gene049037:CDS |
| GCTGAACAGGTTCTTCATGT+TGG | 0.497814 | 4.1:-3381547 | MS.gene049037:CDS |
| GGAACTTGTGTTGTTGTTGA+GGG | 0.498325 | 4.1:-3381619 | MS.gene049037:CDS |
| GGCGGATGATGGATTTGATC+AGG | 0.500013 | 4.1:+3381824 | None:intergenic |
| TGCAGATATCTGCTGTTGCT+CGG | 0.500801 | 4.1:-3381022 | MS.gene049037:intron |
| TACATTGACCTGAGGCGGTA+TGG | 0.502024 | 4.1:-3379075 | MS.gene049037:CDS |
| AATTCTCTGCACGAAATGTC+GGG | 0.502631 | 4.1:+3380517 | None:intergenic |
| AATCATAAATCTGCTCTGCC+AGG | 0.503281 | 4.1:+3378952 | None:intergenic |
| GGATAATTATAGACTATGAC+AGG | 0.507099 | 4.1:+3379690 | None:intergenic |
| ATCTGCAAAAGCAGATAAGA+AGG | 0.510339 | 4.1:-3380751 | MS.gene049037:CDS |
| CTTGGACAACTTGTTCAGAC+TGG | 0.510383 | 4.1:-3381640 | MS.gene049037:CDS |
| GACGGCGGATCAGGTTTAGC+AGG | 0.513325 | 4.1:-3381796 | MS.gene049037:CDS |
| GCAGGCAAGAAAGCAAGAAT+CGG | 0.515281 | 4.1:-3381778 | MS.gene049037:CDS |
| ATCTTCTGTTTCGCTCCAGA+AGG | 0.521124 | 4.1:+3381580 | None:intergenic |
| GCTTCAACATCAGCTTCAGT+TGG | 0.525178 | 4.1:+3380822 | None:intergenic |
| AAGCGTCGACGATAACTTGA+AGG | 0.525722 | 4.1:+3381674 | None:intergenic |
| AATTGCGTTTGCAGACTTGG+AGG | 0.525936 | 4.1:-3380448 | MS.gene049037:intron |
| TCCATCATCCGCCGTGAAGA+CGG | 0.526839 | 4.1:-3381814 | MS.gene049037:CDS |
| TAAGCTTGTTGTTCAGGAGA+AGG | 0.533592 | 4.1:-3380796 | MS.gene049037:CDS |
| TTGAACGACGGAAGCTGCGC+CGG | 0.541271 | 4.1:-3381700 | MS.gene049037:CDS |
| GAATTCTCTGCACGAAATGT+CGG | 0.541676 | 4.1:+3380516 | None:intergenic |
| CCGTGTTGGTTCTGGAACGA+AGG | 0.558261 | 4.1:+3381452 | None:intergenic |
| AGCTTGTTGTTCAGGAGAAG+GGG | 0.558894 | 4.1:-3380794 | MS.gene049037:CDS |
| TCTGCTCTGCCAGGATATCG+TGG | 0.559764 | 4.1:+3378961 | None:intergenic |
| AAAAGAAAATGTATCCAAGC+TGG | 0.561643 | 4.1:-3380694 | MS.gene049037:CDS |
| TTCTGTTTCGCTCCAGAAGG+AGG | 0.561830 | 4.1:+3381583 | None:intergenic |
| TGAAGCAGAGAGGTTGGAGA+AGG | 0.562538 | 4.1:-3380865 | MS.gene049037:CDS |
| GAATTCAGCTTTGGGAACCT+CGG | 0.563789 | 4.1:+3381858 | None:intergenic |
| CCCGGTATTCCTCGAAAGGA+CGG | 0.564925 | 4.1:-3380651 | MS.gene049037:CDS |
| TCAGGTTGGAGAGTTAATTG+GGG | 0.567841 | 4.1:-3379318 | MS.gene049037:intron |
| TGGATAATTGGTCGGATGAG+AGG | 0.571429 | 4.1:+3381887 | None:intergenic |
| TGGAACTTGTGTTGTTGTTG+AGG | 0.575683 | 4.1:-3381620 | MS.gene049037:CDS |
| ATTTAGCTTCTGAGCATGAA+AGG | 0.578456 | 4.1:-3379937 | MS.gene049037:intron |
| ACTAGTGATTGTGAGGGTGC+TGG | 0.579234 | 4.1:-3380918 | MS.gene049037:CDS |
| GTATATGTAAGTCGAATGAA+GGG | 0.579832 | 4.1:+3380034 | None:intergenic |
| ACATCAGCTTCAGTTGGAGG+CGG | 0.581956 | 4.1:+3380828 | None:intergenic |
| GGATTTGATCAGGACGCTGT+CGG | 0.584016 | 4.1:+3381834 | None:intergenic |
| CTGCCAGGATATCGTGGGAA+GGG | 0.584465 | 4.1:+3378967 | None:intergenic |
| AGAAAATGTATCCAAGCTGG+TGG | 0.588613 | 4.1:-3380691 | MS.gene049037:CDS |
| CTGGAAGAATCTGTGACGAA+TGG | 0.592469 | 4.1:-3379995 | MS.gene049037:CDS |
| TCCTCGAAAGGACGGAAAGG+TGG | 0.597542 | 4.1:-3380643 | MS.gene049037:CDS |
| CCAATTATCCACCGTAACCG+AGG | 0.603367 | 4.1:-3381875 | MS.gene049037:CDS |
| TATGGATGTTCTTGTGCCAA+AGG | 0.605646 | 4.1:-3379610 | MS.gene049037:intron |
| GAAGGAGATTAGTGCTGCTG+TGG | 0.610064 | 4.1:-3380733 | MS.gene049037:CDS |
| TCAGCCCGGTATTCCTCGAA+AGG | 0.611373 | 4.1:-3380655 | MS.gene049037:CDS |
| TATGGAACAGTGAAACATGC+CGG | 0.617944 | 4.1:-3379057 | MS.gene049037:CDS |
| GAAAGATCTACACTTCAGCC+CGG | 0.620865 | 4.1:-3380669 | MS.gene049037:CDS |
| CCATAAATTCCATATCCTCA+AGG | 0.622708 | 4.1:+3380110 | None:intergenic |
| TTTGAGAAAGAAGTAAAATG+GGG | 0.624348 | 4.1:-3379965 | MS.gene049037:CDS |
| CTGCTCTGCCAGGATATCGT+GGG | 0.624533 | 4.1:+3378962 | None:intergenic |
| CTTTGTTCAGTGAAGCAGAG+AGG | 0.632800 | 4.1:-3380875 | MS.gene049037:CDS |
| GTTATAATGTTACAGACTAG+AGG | 0.632976 | 4.1:-3379130 | MS.gene049037:intron |
| GGCAAGAAAGCAAGAATCGG+GGG | 0.633348 | 4.1:-3381775 | MS.gene049037:CDS |
| CAGGTTGGAGAGTTAATTGG+GGG | 0.635147 | 4.1:-3379317 | MS.gene049037:CDS |
| CCTTCGTTCCAGAACCAACA+CGG | 0.635811 | 4.1:-3381452 | MS.gene049037:intron |
| GCTTGTTGTTCAGGAGAAGG+GGG | 0.639836 | 4.1:-3380793 | MS.gene049037:CDS |
| TCTGCCAGGATATCGTGGGA+AGG | 0.640927 | 4.1:+3378966 | None:intergenic |
| GTTACTTGACAACTGCCTTG+AGG | 0.641332 | 4.1:-3380125 | MS.gene049037:CDS |
| GGTTACGGTGGATAATTGGT+CGG | 0.641687 | 4.1:+3381879 | None:intergenic |
| CTGTCTTTAGGTCATCATTG+AGG | 0.642743 | 4.1:+3379640 | None:intergenic |
| AATGGTACATTGACCTGAGG+CGG | 0.645218 | 4.1:-3379080 | MS.gene049037:CDS |
| ACTTACATATACAGAAGCTG+TGG | 0.652239 | 4.1:-3380023 | MS.gene049037:CDS |
| TATTCCTCGAAAGGACGGAA+AGG | 0.658806 | 4.1:-3380646 | MS.gene049037:CDS |
| ATCATCCGCCGTGAAGACGG+CGG | 0.659218 | 4.1:-3381811 | MS.gene049037:CDS |
| TGCCTGTTGAGCCATATGAA+TGG | 0.659840 | 4.1:-3379098 | MS.gene049037:CDS |
| TTTGGGAACCTCGGTTACGG+TGG | 0.663451 | 4.1:+3381867 | None:intergenic |
| GTTATGATGTCATTCAACAA+AGG | 0.665614 | 4.1:-3379277 | MS.gene049037:intron |
| AGCACCCTCACAATCACTAG+TGG | 0.672495 | 4.1:+3380920 | None:intergenic |
| AAGGTGAACGAAATCACGCA+AGG | 0.674910 | 4.1:+3381471 | None:intergenic |
| TGTCACCACTAGTGATTGTG+AGG | 0.675390 | 4.1:-3380925 | MS.gene049037:CDS |
| ATGAATGGTACATTGACCTG+AGG | 0.689555 | 4.1:-3379083 | MS.gene049037:CDS |
| AGGCAAGAAAGCAAGAATCG+GGG | 0.689745 | 4.1:-3381776 | MS.gene049037:CDS |
| CAATGATGACCTAAAGACAG+TGG | 0.699761 | 4.1:-3379637 | MS.gene049037:CDS |
| ATATGTAAGTCGAATGAAGG+GGG | 0.701471 | 4.1:+3380036 | None:intergenic |
| TATATGTAAGTCGAATGAAG+GGG | 0.702544 | 4.1:+3380035 | None:intergenic |
| GGATGATATGAAGTGCGCCG+AGG | 0.712177 | 4.1:-3380173 | MS.gene049037:CDS |
| CTGATCCGCCGTCTTCACGG+CGG | 0.741003 | 4.1:+3381806 | None:intergenic |
| GGTATGCAGATACCTAACAG+AGG | 0.750059 | 4.1:-3379727 | MS.gene049037:intron |
| GTCACCACTAGTGATTGTGA+GGG | 0.751157 | 4.1:-3380924 | MS.gene049037:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATATAAAAAGTTAAATT+CGG | - | chr4.1:3379664-3379683 | MS.gene049037:CDS | 10.0% |
| !! | TAATTACAATAATTCTTATT+CGG | - | chr4.1:3379700-3379719 | MS.gene049037:CDS | 10.0% |
| !!! | TTATAATTTCGTTAATTTTA+GGG | - | chr4.1:3379575-3379594 | MS.gene049037:intron | 10.0% |
| !!! | TTTATAATTTCGTTAATTTT+AGG | - | chr4.1:3379574-3379593 | MS.gene049037:intron | 10.0% |
| !! | TTATAAAATAATCCCTAAAT+TGG | + | chr4.1:3379561-3379580 | None:intergenic | 15.0% |
| !!! | AATTCAAATACTGTTTTTTA+GGG | - | chr4.1:3380541-3380560 | MS.gene049037:CDS | 15.0% |
| !!! | TTTTTATGCATGTTATTATT+GGG | - | chr4.1:3379802-3379821 | MS.gene049037:intron | 15.0% |
| !!! | TTTTTTATGCATGTTATTAT+TGG | - | chr4.1:3379801-3379820 | MS.gene049037:intron | 15.0% |
| !! | AAACAACACAATTTAATAAG+AGG | + | chr4.1:3381086-3381105 | None:intergenic | 20.0% |
| !! | AACTACATATCAAACTATTA+AGG | - | chr4.1:3381379-3381398 | MS.gene049037:intron | 20.0% |
| !! | AATAATTCTTATTCGGAATT+GGG | - | chr4.1:3379707-3379726 | MS.gene049037:CDS | 20.0% |
| !! | AATTTGAGAAAGAAGTAAAA+TGG | - | chr4.1:3380882-3380901 | MS.gene049037:CDS | 20.0% |
| !! | AGAATTATTGTAATTACCAA+AGG | + | chr4.1:3379696-3379715 | None:intergenic | 20.0% |
| !! | ATTTAATAAGAGGAATGATA+AGG | + | chr4.1:3381076-3381095 | None:intergenic | 20.0% |
| !! | ATTTGAGAAAGAAGTAAAAT+GGG | - | chr4.1:3380883-3380902 | MS.gene049037:CDS | 20.0% |
| !! | CATGTTAAAACAAAATATAC+AGG | + | chr4.1:3381272-3381291 | None:intergenic | 20.0% |
| !! | TAATATTTGCATTATTGTGT+AGG | - | chr4.1:3380655-3380674 | MS.gene049037:CDS | 20.0% |
| !! | TATTTATGAATTAGTGTAAG+CGG | + | chr4.1:3381611-3381630 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTAACATGTCTA+TGG | - | chr4.1:3381276-3381295 | MS.gene049037:intron | 20.0% |
| !!! | CAATTCAAATACTGTTTTTT+AGG | - | chr4.1:3380540-3380559 | MS.gene049037:CDS | 20.0% |
| !!! | GTGTTTTTTACGATTAATAT+TGG | - | chr4.1:3380978-3380997 | MS.gene049037:CDS | 20.0% |
| !!! | TACAATTTTAAGGATTGAAT+AGG | - | chr4.1:3379616-3379635 | MS.gene049037:CDS | 20.0% |
| !!! | TTTGTTATAAACCACATTAT+CGG | - | chr4.1:3380509-3380528 | MS.gene049037:CDS | 20.0% |
| ! | ACAGAAAAATCCTTTACAAA+AGG | + | chr4.1:3381659-3381678 | None:intergenic | 25.0% |
| ! | ACATTATAACAGTAGAAACA+AGG | + | chr4.1:3381709-3381728 | None:intergenic | 25.0% |
| ! | CAATAATTCTTATTCGGAAT+TGG | - | chr4.1:3379706-3379725 | MS.gene049037:CDS | 25.0% |
| ! | TCATCATTACTATACACAAT+TGG | + | chr4.1:3379461-3379480 | None:intergenic | 25.0% |
| ! | TTTGAGAAAGAAGTAAAATG+GGG | - | chr4.1:3380884-3380903 | MS.gene049037:CDS | 25.0% |
| !! | TTGGAACACATTAGTTTATT+TGG | + | chr4.1:3379533-3379552 | None:intergenic | 25.0% |
| !!! | AGTTTTTGAAATTGTCTTGA+AGG | + | chr4.1:3379498-3379517 | None:intergenic | 25.0% |
| !!! | ATACATTTTTCAACAAGCAT+GGG | - | chr4.1:3379878-3379897 | MS.gene049037:intron | 25.0% |
| !!! | ATTTCCTGTTGTTGTTTTAT+TGG | + | chr4.1:3379649-3379668 | None:intergenic | 25.0% |
| !!! | GTTTTTGAAATTGTCTTGAA+GGG | + | chr4.1:3379497-3379516 | None:intergenic | 25.0% |
| !!! | TAGAATGCTTTGATTTCTTT+TGG | + | chr4.1:3381183-3381202 | None:intergenic | 25.0% |
| AAAAGAAAATGTATCCAAGC+TGG | - | chr4.1:3380155-3380174 | MS.gene049037:CDS | 30.0% | |
| AATCCCTAAATTGGAAATCT+TGG | + | chr4.1:3379552-3379571 | None:intergenic | 30.0% | |
| ATATACAGGATACATACCTT+TGG | + | chr4.1:3381258-3381277 | None:intergenic | 30.0% | |
| CAAAAATTTCACATATGCCT+CGG | + | chr4.1:3380696-3380715 | None:intergenic | 30.0% | |
| GGATAATTATAGACTATGAC+AGG | + | chr4.1:3381162-3381181 | None:intergenic | 30.0% | |
| GTATATGTAAGTCGAATGAA+GGG | + | chr4.1:3380818-3380837 | None:intergenic | 30.0% | |
| GTTATAATGTTACAGACTAG+AGG | - | chr4.1:3381719-3381738 | MS.gene049037:CDS | 30.0% | |
| GTTATGATGTCATTCAACAA+AGG | - | chr4.1:3381572-3381591 | MS.gene049037:CDS | 30.0% | |
| GTTCCAAGATTTCCAATTTA+GGG | - | chr4.1:3379546-3379565 | MS.gene049037:intron | 30.0% | |
| TAATAAGAGGAATGATAAGG+TGG | + | chr4.1:3381073-3381092 | None:intergenic | 30.0% | |
| TATATGTAAGTCGAATGAAG+GGG | + | chr4.1:3380817-3380836 | None:intergenic | 30.0% | |
| TGTATATGTAAGTCGAATGA+AGG | + | chr4.1:3380819-3380838 | None:intergenic | 30.0% | |
| TGTTCCAAGATTTCCAATTT+AGG | - | chr4.1:3379545-3379564 | MS.gene049037:intron | 30.0% | |
| TTAAATTCGGAATGAACCTT+TGG | - | chr4.1:3379677-3379696 | MS.gene049037:CDS | 30.0% | |
| TTACTTATATGACACTGAGT+GGG | - | chr4.1:3381436-3381455 | MS.gene049037:intron | 30.0% | |
| TTTACTTATATGACACTGAG+TGG | - | chr4.1:3381435-3381454 | MS.gene049037:intron | 30.0% | |
| ! | ATGTGAAATTTTTGTGTCAG+TGG | - | chr4.1:3380702-3380721 | MS.gene049037:CDS | 30.0% |
| ! | GTAAAGGATTTTTCTGTTCA+TGG | - | chr4.1:3381662-3381681 | MS.gene049037:CDS | 30.0% |
| ! | TACTGTGTTTCCTTTTGTAA+AGG | - | chr4.1:3381646-3381665 | MS.gene049037:CDS | 30.0% |
| ! | TCACATCTCTAATATTTTCC+AGG | + | chr4.1:3381860-3381879 | None:intergenic | 30.0% |
| ! | TTGCATTGATCGTTTGAAAA+TGG | - | chr4.1:3380781-3380800 | MS.gene049037:CDS | 30.0% |
| !! | CATACATTTTTCAACAAGCA+TGG | - | chr4.1:3379877-3379896 | MS.gene049037:intron | 30.0% |
| AAAAAAGAAGCTTACCGTGT+TGG | + | chr4.1:3379414-3379433 | None:intergenic | 35.0% | |
| AAACAGTCAAAAACGCTTGA+CGG | + | chr4.1:3380254-3380273 | None:intergenic | 35.0% | |
| AATTGTAGAGACCAGACAAT+TGG | + | chr4.1:3379603-3379622 | None:intergenic | 35.0% | |
| ACTTACATATACAGAAGCTG+TGG | - | chr4.1:3380826-3380845 | MS.gene049037:CDS | 35.0% | |
| AGGTCAATGTACCATTCATA+TGG | + | chr4.1:3381765-3381784 | None:intergenic | 35.0% | |
| ATATGTAAGTCGAATGAAGG+GGG | + | chr4.1:3380816-3380835 | None:intergenic | 35.0% | |
| ATCTGCAAAAGCAGATAAGA+AGG | - | chr4.1:3380098-3380117 | MS.gene049037:CDS | 35.0% | |
| ATGTTACAGACTAGAGGATA+TGG | - | chr4.1:3381725-3381744 | MS.gene049037:CDS | 35.0% | |
| ATTGTAGAGACCAGACAATT+GGG | + | chr4.1:3379602-3379621 | None:intergenic | 35.0% | |
| CCATAAATTCCATATCCTCA+AGG | + | chr4.1:3380742-3380761 | None:intergenic | 35.0% | |
| CCTTGAGGATATGGAATTTA+TGG | - | chr4.1:3380739-3380758 | MS.gene049037:CDS | 35.0% | |
| CTCACCAATAAAACAACAAC+AGG | - | chr4.1:3379642-3379661 | MS.gene049037:CDS | 35.0% | |
| CTTGGGAAAAGAACTATAGA+AGG | - | chr4.1:3381301-3381320 | MS.gene049037:intron | 35.0% | |
| GAACGTGTAACTGTAATTTC+AGG | - | chr4.1:3381513-3381532 | MS.gene049037:CDS | 35.0% | |
| GCAACCTTTATCAAACTTGT+CGG | + | chr4.1:3380765-3380784 | None:intergenic | 35.0% | |
| TACTTATATGACACTGAGTG+GGG | - | chr4.1:3381437-3381456 | MS.gene049037:intron | 35.0% | |
| TTAACATGTCTATGGTGCTT+GGG | - | chr4.1:3381284-3381303 | MS.gene049037:intron | 35.0% | |
| TTAGGCAAAGGATATTTAGC+AGG | + | chr4.1:3379338-3379357 | None:intergenic | 35.0% | |
| TTTAACATGTCTATGGTGCT+TGG | - | chr4.1:3381283-3381302 | MS.gene049037:intron | 35.0% | |
| ! | AGGATGATTCTTTTTGCAAC+CGG | - | chr4.1:3381834-3381853 | MS.gene049037:CDS | 35.0% |
| ! | ATCTCTAATATTTTCCAGGC+CGG | + | chr4.1:3381856-3381875 | None:intergenic | 35.0% |
| ! | ATTTAGCTTCTGAGCATGAA+AGG | - | chr4.1:3380912-3380931 | MS.gene049037:CDS | 35.0% |
| ! | GTCTGGTCTCTACAATTTTA+AGG | - | chr4.1:3379606-3379625 | MS.gene049037:intron | 35.0% |
| ! | GTGTAACTGTAATTTCAGGT+TGG | - | chr4.1:3381517-3381536 | MS.gene049037:CDS | 35.0% |
| !! | ATTGTGTTGTTTGATGCCTT+TGG | - | chr4.1:3381094-3381113 | MS.gene049037:intron | 35.0% |
| !! | TTCAGGTTGGAGAGTTAATT+GGG | - | chr4.1:3381530-3381549 | MS.gene049037:CDS | 35.0% |
| !! | TTGTGTTGTTTGATGCCTTT+GGG | - | chr4.1:3381095-3381114 | MS.gene049037:intron | 35.0% |
| !! | TTTCAGGTTGGAGAGTTAAT+TGG | - | chr4.1:3381529-3381548 | MS.gene049037:CDS | 35.0% |
| AACAGTCAAAAACGCTTGAC+GGG | + | chr4.1:3380253-3380272 | None:intergenic | 40.0% | |
| AAGTCTGCAAACGCAATTTC+AGG | + | chr4.1:3380399-3380418 | None:intergenic | 40.0% | |
| AATTCTCTGCACGAAATGTC+GGG | + | chr4.1:3380335-3380354 | None:intergenic | 40.0% | |
| ACACTGCTTACTATGATGGT+AGG | + | chr4.1:3381327-3381346 | None:intergenic | 40.0% | |
| AGAAAATGTATCCAAGCTGG+TGG | - | chr4.1:3380158-3380177 | MS.gene049037:CDS | 40.0% | |
| ATCTGCATACCATAACCCAA+AGG | + | chr4.1:3381113-3381132 | None:intergenic | 40.0% | |
| ATGAATGGTACATTGACCTG+AGG | - | chr4.1:3381766-3381785 | MS.gene049037:CDS | 40.0% | |
| ATGGCCGACAAGTTTGATAA+AGG | - | chr4.1:3380758-3380777 | MS.gene049037:CDS | 40.0% | |
| CAATCACTAGTGGTGACAAT+TGG | + | chr4.1:3379922-3379941 | None:intergenic | 40.0% | |
| CAATGATGACCTAAAGACAG+TGG | - | chr4.1:3381212-3381231 | MS.gene049037:intron | 40.0% | |
| CTGTCTTTAGGTCATCATTG+AGG | + | chr4.1:3381212-3381231 | None:intergenic | 40.0% | |
| CTTAGTCGCGTGTATACATT+TGG | - | chr4.1:3380309-3380328 | MS.gene049037:intron | 40.0% | |
| GAATTCTCTGCACGAAATGT+CGG | + | chr4.1:3380336-3380355 | None:intergenic | 40.0% | |
| GACGATAACTTGAAGGTTAC+CGG | + | chr4.1:3379171-3379190 | None:intergenic | 40.0% | |
| GGATATTTAGCAGGATCAAC+AGG | + | chr4.1:3379329-3379348 | None:intergenic | 40.0% | |
| GTCTACACTGCTTACTATGA+TGG | + | chr4.1:3381331-3381350 | None:intergenic | 40.0% | |
| TACAGAAGCTGTGGAAATAC+TGG | - | chr4.1:3380835-3380854 | MS.gene049037:CDS | 40.0% | |
| TACCATTCATATGGCTCAAC+AGG | + | chr4.1:3381756-3381775 | None:intergenic | 40.0% | |
| TATGGAACAGTGAAACATGC+CGG | - | chr4.1:3381792-3381811 | MS.gene049037:CDS | 40.0% | |
| TATGGATGTTCTTGTGCCAA+AGG | - | chr4.1:3381239-3381258 | MS.gene049037:intron | 40.0% | |
| TCCGTCGTTCAATTCCAAAA+AGG | + | chr4.1:3379141-3379160 | None:intergenic | 40.0% | |
| TCTGATACTTCACCTCTGTT+AGG | + | chr4.1:3381137-3381156 | None:intergenic | 40.0% | |
| TGAAATTGCGTTTGCAGACT+TGG | - | chr4.1:3380398-3380417 | MS.gene049037:intron | 40.0% | |
| ! | GCATTTGGCTGAATTTTGGA+TGG | - | chr4.1:3380368-3380387 | MS.gene049037:intron | 40.0% |
| ! | GGAACTTGTGTTGTTGTTGA+GGG | - | chr4.1:3379230-3379249 | MS.gene049037:intron | 40.0% |
| ! | TGGAACTTGTGTTGTTGTTG+AGG | - | chr4.1:3379229-3379248 | MS.gene049037:intron | 40.0% |
| ! | TGTTTGATGCCTTTGGGTTA+TGG | - | chr4.1:3381101-3381120 | MS.gene049037:intron | 40.0% |
| !! | AAGCTTGTTGTTCAGGAGAA+GGG | - | chr4.1:3380054-3380073 | MS.gene049037:CDS | 40.0% |
| !! | ATTTTAGGGACCCAATTGTC+TGG | - | chr4.1:3379589-3379608 | MS.gene049037:intron | 40.0% |
| !! | CAAGCGTTTTTGACTGTTTC+TGG | - | chr4.1:3380255-3380274 | MS.gene049037:intron | 40.0% |
| !! | CTGTTACTTTCGTGAATGTG+TGG | - | chr4.1:3381001-3381020 | MS.gene049037:CDS | 40.0% |
| !! | GCTTTTGTGGTTGGTGTAAT+AGG | - | chr4.1:3381491-3381510 | MS.gene049037:CDS | 40.0% |
| !! | TAAGCTTGTTGTTCAGGAGA+AGG | - | chr4.1:3380053-3380072 | MS.gene049037:CDS | 40.0% |
| !! | TCAGGTTGGAGAGTTAATTG+GGG | - | chr4.1:3381531-3381550 | MS.gene049037:CDS | 40.0% |
| !!! | GCCTTTTTGGAATTGAACGA+CGG | - | chr4.1:3379137-3379156 | MS.gene049037:intron | 40.0% |
| !!! | GTTATACCCAGTTGCTTTTG+TGG | - | chr4.1:3381478-3381497 | MS.gene049037:CDS | 40.0% |
| !!! | TCAAGAGTGAGTCTGGTTTT+AGG | + | chr4.1:3379356-3379375 | None:intergenic | 40.0% |
| AACCGGAAGAAAAGCCGATA+AGG | - | chr4.1:3379106-3379125 | MS.gene049037:CDS | 45.0% | |
| AAGCACCAACCATAGGAGTA+GGG | + | chr4.1:3380612-3380631 | None:intergenic | 45.0% | |
| AAGGTGAACGAAATCACGCA+AGG | + | chr4.1:3379381-3379400 | None:intergenic | 45.0% | |
| AATGGTACATTGACCTGAGG+CGG | - | chr4.1:3381769-3381788 | MS.gene049037:CDS | 45.0% | |
| AATTGCGTTTGCAGACTTGG+AGG | - | chr4.1:3380401-3380420 | MS.gene049037:intron | 45.0% | |
| ACACCAACCACAAAAGCAAC+TGG | + | chr4.1:3381488-3381507 | None:intergenic | 45.0% | |
| ACAGTGAAACATGCCGGATT+CGG | - | chr4.1:3381798-3381817 | MS.gene049037:CDS | 45.0% | |
| AGAGGAATGATAAGGTGGCT+TGG | + | chr4.1:3381068-3381087 | None:intergenic | 45.0% | |
| AGGCAAGAAAGCAAGAATCG+GGG | - | chr4.1:3379073-3379092 | MS.gene049037:CDS | 45.0% | |
| AGTTAATTGGGGGAAGCCAA+AGG | - | chr4.1:3381542-3381561 | MS.gene049037:CDS | 45.0% | |
| ATCTTCTGTTTCGCTCCAGA+AGG | + | chr4.1:3379272-3379291 | None:intergenic | 45.0% | |
| CAAGGATTCAAGAGTGAGTC+TGG | + | chr4.1:3379363-3379382 | None:intergenic | 45.0% | |
| CACCAACCACAAAAGCAACT+GGG | + | chr4.1:3381487-3381506 | None:intergenic | 45.0% | |
| CAGAGAATTCTCACACTTCC+AGG | - | chr4.1:3380346-3380365 | MS.gene049037:intron | 45.0% | |
| CAGGCAAGAAAGCAAGAATC+GGG | - | chr4.1:3379072-3379091 | MS.gene049037:CDS | 45.0% | |
| CATCTCAAACTTCCTCCTTC+TGG | - | chr4.1:3379254-3379273 | MS.gene049037:intron | 45.0% | |
| CCAAAATTCAGCCAAATGCC+TGG | + | chr4.1:3380367-3380386 | None:intergenic | 45.0% | |
| CTGGAAGAATCTGTGACGAA+TGG | - | chr4.1:3380854-3380873 | MS.gene049037:CDS | 45.0% | |
| CTGTCGGAGAATTCAGCTTT+GGG | + | chr4.1:3379002-3379021 | None:intergenic | 45.0% | |
| CTTTGTTCAGTGAAGCAGAG+AGG | - | chr4.1:3379974-3379993 | MS.gene049037:CDS | 45.0% | |
| GAAAGATCTACACTTCAGCC+CGG | - | chr4.1:3380180-3380199 | MS.gene049037:intron | 45.0% | |
| GCAGGCAAGAAAGCAAGAAT+CGG | - | chr4.1:3379071-3379090 | MS.gene049037:CDS | 45.0% | |
| GCTGAACAGGTTCTTCATGT+TGG | - | chr4.1:3379302-3379321 | MS.gene049037:CDS | 45.0% | |
| GCTTCAACATCAGCTTCAGT+TGG | + | chr4.1:3380030-3380049 | None:intergenic | 45.0% | |
| GGTATGCAGATACCTAACAG+AGG | - | chr4.1:3381122-3381141 | MS.gene049037:intron | 45.0% | |
| GGTTACGGTGGATAATTGGT+CGG | + | chr4.1:3378973-3378992 | None:intergenic | 45.0% | |
| GTCACCACTAGTGATTGTGA+GGG | - | chr4.1:3379925-3379944 | MS.gene049037:intron | 45.0% | |
| GTTAATTGGGGGAAGCCAAA+GGG | - | chr4.1:3381543-3381562 | MS.gene049037:CDS | 45.0% | |
| GTTACTTGACAACTGCCTTG+AGG | - | chr4.1:3380724-3380743 | MS.gene049037:CDS | 45.0% | |
| TATCTGCTGTTGCTCGGATT+CGG | - | chr4.1:3379833-3379852 | MS.gene049037:intron | 45.0% | |
| TATTCCTCGAAAGGACGGAA+AGG | - | chr4.1:3380203-3380222 | MS.gene049037:intron | 45.0% | |
| TCAACATCAGCTTCAGTTGG+AGG | + | chr4.1:3380027-3380046 | None:intergenic | 45.0% | |
| TGACAACTGCCTTGAGGATA+TGG | - | chr4.1:3380730-3380749 | MS.gene049037:CDS | 45.0% | |
| TGCAGATATCTGCTGTTGCT+CGG | - | chr4.1:3379827-3379846 | MS.gene049037:intron | 45.0% | |
| TGCCTGTTGAGCCATATGAA+TGG | - | chr4.1:3381751-3381770 | MS.gene049037:CDS | 45.0% | |
| TGGATAATTGGTCGGATGAG+AGG | + | chr4.1:3378965-3378984 | None:intergenic | 45.0% | |
| TGTAGATCTTTCCACCAGCT+TGG | + | chr4.1:3380172-3380191 | None:intergenic | 45.0% | |
| TGTCACCACTAGTGATTGTG+AGG | - | chr4.1:3379924-3379943 | MS.gene049037:intron | 45.0% | |
| TTCAAAGCCAAGACCGAATC+CGG | + | chr4.1:3381814-3381833 | None:intergenic | 45.0% | |
| TTCTCACACTTCCAGGCATT+TGG | - | chr4.1:3380353-3380372 | MS.gene049037:intron | 45.0% | |
| TTGACACTCAGCCGATAATG+TGG | + | chr4.1:3380523-3380542 | None:intergenic | 45.0% | |
| ! | AAAGCACCAACCATAGGAGT+AGG | + | chr4.1:3380613-3380632 | None:intergenic | 45.0% |
| ! | CAGGTTGGAGAGTTAATTGG+GGG | - | chr4.1:3381532-3381551 | MS.gene049037:CDS | 45.0% |
| ! | CCAGGCATTTGGCTGAATTT+TGG | - | chr4.1:3380364-3380383 | MS.gene049037:intron | 45.0% |
| ! | CTTGGACAACTTGTTCAGAC+TGG | - | chr4.1:3379209-3379228 | MS.gene049037:intron | 45.0% |
| ! | TAAGGACGCTTTCGCCTTTT+TGG | - | chr4.1:3379124-3379143 | MS.gene049037:intron | 45.0% |
| !! | AAAGGCGAAAGCGTCCTTAT+CGG | + | chr4.1:3379123-3379142 | None:intergenic | 45.0% |
| !! | AAGCGTCGACGATAACTTGA+AGG | + | chr4.1:3379178-3379197 | None:intergenic | 45.0% |
| !! | ACAGCAAAAGCACCAACCAT+AGG | + | chr4.1:3380619-3380638 | None:intergenic | 45.0% |
| !! | AGCTGCTAAGCTTGTTGTTC+AGG | - | chr4.1:3380047-3380066 | MS.gene049037:CDS | 45.0% |
| !! | AGCTTGTTGTTCAGGAGAAG+GGG | - | chr4.1:3380055-3380074 | MS.gene049037:CDS | 45.0% |
| !! | GAATTCAGCTTTGGGAACCT+CGG | + | chr4.1:3378994-3379013 | None:intergenic | 45.0% |
| !! | GATTCGGTCTTGGCTTTGAA+AGG | - | chr4.1:3381814-3381833 | MS.gene049037:CDS | 45.0% |
| !! | TATGGTTGGTGCTTTTGCTG+TGG | - | chr4.1:3380618-3380637 | MS.gene049037:CDS | 45.0% |
| !!! | GTCCTTATCGGCTTTTCTTC+CGG | + | chr4.1:3379111-3379130 | None:intergenic | 45.0% |
| !!! | GTGAGTCTGGTTTTAGGCAA+AGG | + | chr4.1:3379350-3379369 | None:intergenic | 45.0% |
| !!! | TACCCAGTTGCTTTTGTGGT+TGG | - | chr4.1:3381482-3381501 | MS.gene049037:CDS | 45.0% |
| ACATCAGCTTCAGTTGGAGG+CGG | + | chr4.1:3380024-3380043 | None:intergenic | 50.0% | |
| AGAAAGCAAGAATCGGGGGA+TGG | - | chr4.1:3379078-3379097 | MS.gene049037:CDS | 50.0% | |
| AGCACCAACCATAGGAGTAG+GGG | + | chr4.1:3380611-3380630 | None:intergenic | 50.0% | |
| AGCACCCTCACAATCACTAG+TGG | + | chr4.1:3379932-3379951 | None:intergenic | 50.0% | |
| ATTCCCTTCCCACGATATCC+TGG | - | chr4.1:3381879-3381898 | MS.gene049037:CDS | 50.0% | |
| CAACTTCACCCCTACTCCTA+TGG | - | chr4.1:3380600-3380619 | MS.gene049037:CDS | 50.0% | |
| CATAGGAGTAGGGGTGAAGT+TGG | + | chr4.1:3380602-3380621 | None:intergenic | 50.0% | |
| CATCATAACGCTCCTCCCTT+TGG | + | chr4.1:3381561-3381580 | None:intergenic | 50.0% | |
| CCAATTATCCACCGTAACCG+AGG | - | chr4.1:3378974-3378993 | MS.gene049037:CDS | 50.0% | |
| CCATAGCAGCCACTGTCTTT+AGG | + | chr4.1:3381224-3381243 | None:intergenic | 50.0% | |
| CCTAAAGACAGTGGCTGCTA+TGG | - | chr4.1:3381221-3381240 | MS.gene049037:intron | 50.0% | |
| CCTCGGTTACGGTGGATAAT+TGG | + | chr4.1:3378977-3378996 | None:intergenic | 50.0% | |
| CCTTCGTTCCAGAACCAACA+CGG | - | chr4.1:3379397-3379416 | MS.gene049037:intron | 50.0% | |
| GAAAGCAAGAATCGGGGGAT+GGG | - | chr4.1:3379079-3379098 | MS.gene049037:CDS | 50.0% | |
| GCTGTCGGAGAATTCAGCTT+TGG | + | chr4.1:3379003-3379022 | None:intergenic | 50.0% | |
| GGATTTGATCAGGACGCTGT+CGG | + | chr4.1:3379018-3379037 | None:intergenic | 50.0% | |
| GGCAAGAAAGCAAGAATCGG+GGG | - | chr4.1:3379074-3379093 | MS.gene049037:CDS | 50.0% | |
| GTTCAGTGAAGCAGAGAGGT+TGG | - | chr4.1:3379978-3379997 | MS.gene049037:CDS | 50.0% | |
| TACATTGACCTGAGGCGGTA+TGG | - | chr4.1:3381774-3381793 | MS.gene049037:CDS | 50.0% | |
| TCCGTCCTTTCGAGGAATAC+CGG | + | chr4.1:3380202-3380221 | None:intergenic | 50.0% | |
| TGAAGCAGAGAGGTTGGAGA+AGG | - | chr4.1:3379984-3380003 | MS.gene049037:CDS | 50.0% | |
| TTCACCCCTACTCCTATGGT+TGG | - | chr4.1:3380604-3380623 | MS.gene049037:CDS | 50.0% | |
| TTCTGTTTCGCTCCAGAAGG+AGG | + | chr4.1:3379269-3379288 | None:intergenic | 50.0% | |
| ! | AAACATGCCGGATTCGGTCT+TGG | - | chr4.1:3381804-3381823 | MS.gene049037:CDS | 50.0% |
| ! | ACTAGTGATTGTGAGGGTGC+TGG | - | chr4.1:3379931-3379950 | MS.gene049037:intron | 50.0% |
| ! | CTTTGCATCGACACTCAGTC+TGG | + | chr4.1:3379750-3379769 | None:intergenic | 50.0% |
| ! | GAAGGAGATTAGTGCTGCTG+TGG | - | chr4.1:3380116-3380135 | MS.gene049037:CDS | 50.0% |
| ! | GATTCTTTTTGCAACCGGCC+TGG | - | chr4.1:3381839-3381858 | MS.gene049037:CDS | 50.0% |
| ! | GGAATGATAAGGTGGCTTGG+TGG | + | chr4.1:3381065-3381084 | None:intergenic | 50.0% |
| !! | AGCTTTGGGAACCTCGGTTA+CGG | + | chr4.1:3378988-3379007 | None:intergenic | 50.0% |
| !! | AGGTGGCTTGGTGGTTGAAT+AGG | + | chr4.1:3381056-3381075 | None:intergenic | 50.0% |
| !! | CAGACTGAGTGTCGATGCAA+AGG | - | chr4.1:3379748-3379767 | MS.gene049037:intron | 50.0% |
| !! | GAAGCTTACCGTGTTGGTTC+TGG | + | chr4.1:3379408-3379427 | None:intergenic | 50.0% |
| !! | GCTTGTTGTTCAGGAGAAGG+GGG | - | chr4.1:3380056-3380075 | MS.gene049037:CDS | 50.0% |
| !! | GGCGGATGATGGATTTGATC+AGG | + | chr4.1:3379028-3379047 | None:intergenic | 50.0% |
| !! | GGTGGCTTGGTGGTTGAATA+GGG | + | chr4.1:3381055-3381074 | None:intergenic | 50.0% |
| AACCTGATCCGCCGTCTTCA+CGG | + | chr4.1:3379049-3379068 | None:intergenic | 55.0% | |
| AATTGGGGGAAGCCAAAGGG+AGG | - | chr4.1:3381546-3381565 | MS.gene049037:CDS | 55.0% | |
| ATCGGGGGATGGGTGAAAAC+CGG | - | chr4.1:3379089-3379108 | MS.gene049037:CDS | 55.0% | |
| CCCGGTATTCCTCGAAAGGA+CGG | - | chr4.1:3380198-3380217 | MS.gene049037:intron | 55.0% | |
| CCGTCCTTTCGAGGAATACC+GGG | + | chr4.1:3380201-3380220 | None:intergenic | 55.0% | |
| CTGCCAGGATATCGTGGGAA+GGG | + | chr4.1:3381885-3381904 | None:intergenic | 55.0% | |
| CTGCTCTGCCAGGATATCGT+GGG | + | chr4.1:3381890-3381909 | None:intergenic | 55.0% | |
| GGATGATATGAAGTGCGCCG+AGG | - | chr4.1:3380676-3380695 | MS.gene049037:CDS | 55.0% | |
| TCACTGTTCCATACCGCCTC+AGG | + | chr4.1:3381785-3381804 | None:intergenic | 55.0% | |
| TCAGCCCGGTATTCCTCGAA+AGG | - | chr4.1:3380194-3380213 | MS.gene049037:intron | 55.0% | |
| TCCACCTTTCCGTCCTTTCG+AGG | + | chr4.1:3380210-3380229 | None:intergenic | 55.0% | |
| TCCATCATCCGCCGTGAAGA+CGG | - | chr4.1:3379035-3379054 | MS.gene049037:CDS | 55.0% | |
| TCCTCGAAAGGACGGAAAGG+TGG | - | chr4.1:3380206-3380225 | MS.gene049037:intron | 55.0% | |
| TCTGCCAGGATATCGTGGGA+AGG | + | chr4.1:3381886-3381905 | None:intergenic | 55.0% | |
| TCTGCTCTGCCAGGATATCG+TGG | + | chr4.1:3381891-3381910 | None:intergenic | 55.0% | |
| TGAATAGGGCGGAGCAGCAA+AGG | + | chr4.1:3381041-3381060 | None:intergenic | 55.0% | |
| TGTTGTTCAGGAGAAGGGGG+AGG | - | chr4.1:3380059-3380078 | MS.gene049037:CDS | 55.0% | |
| TTTGGGAACCTCGGTTACGG+TGG | + | chr4.1:3378985-3379004 | None:intergenic | 55.0% | |
| ! | GACGCTTCGCTTGCTGATCT+TGG | - | chr4.1:3379191-3379210 | MS.gene049037:intron | 55.0% |
| !! | CCGTGTTGGTTCTGGAACGA+AGG | + | chr4.1:3379400-3379419 | None:intergenic | 55.0% |
| !! | GGCTTGGTGGTTGAATAGGG+CGG | + | chr4.1:3381052-3381071 | None:intergenic | 55.0% |
| ATCATCCGCCGTGAAGACGG+CGG | - | chr4.1:3379038-3379057 | MS.gene049037:CDS | 60.0% | |
| GACGGCGGATCAGGTTTAGC+AGG | - | chr4.1:3379053-3379072 | MS.gene049037:CDS | 60.0% | |
| GATCGAGCTTCGCGCTGAAC+AGG | - | chr4.1:3379289-3379308 | MS.gene049037:CDS | 60.0% | |
| GGCGGAGCAGCAAAGGACAT+AGG | + | chr4.1:3381034-3381053 | None:intergenic | 60.0% | |
| TTGAACGACGGAAGCTGCGC+CGG | - | chr4.1:3379149-3379168 | MS.gene049037:intron | 60.0% | |
| CTGATCCGCCGTCTTCACGG+CGG | + | chr4.1:3379046-3379065 | None:intergenic | 65.0% | |
| GCCGTCTTCACGGCGGATGA+TGG | + | chr4.1:3379039-3379058 | None:intergenic | 65.0% | |
| CGCCGTGAAGACGGCGGATC+AGG | - | chr4.1:3379044-3379063 | MS.gene049037:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 3378954 | 3381917 | 3378954 | ID=MS.gene049037 |
| chr4.1 | mRNA | 3378954 | 3381917 | 3378954 | ID=MS.gene049037.t1;Parent=MS.gene049037 |
| chr4.1 | exon | 3381453 | 3381917 | 3381453 | ID=MS.gene049037.t1.exon1;Parent=MS.gene049037.t1 |
| chr4.1 | CDS | 3381453 | 3381917 | 3381453 | ID=cds.MS.gene049037.t1;Parent=MS.gene049037.t1 |
| chr4.1 | exon | 3380449 | 3381039 | 3380449 | ID=MS.gene049037.t1.exon2;Parent=MS.gene049037.t1 |
| chr4.1 | CDS | 3380449 | 3381039 | 3380449 | ID=cds.MS.gene049037.t1;Parent=MS.gene049037.t1 |
| chr4.1 | exon | 3379938 | 3380194 | 3379938 | ID=MS.gene049037.t1.exon3;Parent=MS.gene049037.t1 |
| chr4.1 | CDS | 3379938 | 3380194 | 3379938 | ID=cds.MS.gene049037.t1;Parent=MS.gene049037.t1 |
| chr4.1 | exon | 3379611 | 3379740 | 3379611 | ID=MS.gene049037.t1.exon4;Parent=MS.gene049037.t1 |
| chr4.1 | CDS | 3379611 | 3379740 | 3379611 | ID=cds.MS.gene049037.t1;Parent=MS.gene049037.t1 |
| chr4.1 | exon | 3379278 | 3379336 | 3379278 | ID=MS.gene049037.t1.exon5;Parent=MS.gene049037.t1 |
| chr4.1 | CDS | 3379278 | 3379336 | 3379278 | ID=cds.MS.gene049037.t1;Parent=MS.gene049037.t1 |
| chr4.1 | exon | 3378954 | 3379137 | 3378954 | ID=MS.gene049037.t1.exon6;Parent=MS.gene049037.t1 |
| chr4.1 | CDS | 3378954 | 3379137 | 3378954 | ID=cds.MS.gene049037.t1;Parent=MS.gene049037.t1 |
| Gene Sequence |
| Protein sequence |
