Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41329.t1 | XP_013467257.1 | 93.3 | 599 | 40 | 0 | 1 | 599 | 1 | 599 | 2.00E-254 | 888.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41329.t1 | Q9M8Z5 | 64.6 | 568 | 187 | 5 | 1 | 564 | 1 | 558 | 1.7e-161 | 570.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41329.t1 | A0A072VI64 | 93.3 | 599 | 40 | 0 | 1 | 599 | 1 | 599 | 1.5e-254 | 888.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05188 | MS.gene41329 | 0.806354 | 8.57E-50 | -1.69E-46 |
MS.gene053617 | MS.gene41329 | 0.835737 | 1.41E-56 | -1.69E-46 |
MS.gene056403 | MS.gene41329 | 0.877705 | 5.07E-69 | -1.69E-46 |
MS.gene056605 | MS.gene41329 | 0.897261 | 1.67E-76 | -1.69E-46 |
MS.gene05689 | MS.gene41329 | 0.832067 | 1.17E-55 | -1.69E-46 |
MS.gene059901 | MS.gene41329 | -0.807871 | 4.09E-50 | -1.69E-46 |
MS.gene06011 | MS.gene41329 | 0.803073 | 4.15E-49 | -1.69E-46 |
MS.gene060830 | MS.gene41329 | 0.868991 | 4.32E-66 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41329.t1 | MTR_1g048030 | 95.900 | 561 | 23 | 0 | 39 | 599 | 39 | 599 | 0.0 | 1026 |
MS.gene41329.t1 | MTR_2g079510 | 34.848 | 396 | 225 | 7 | 125 | 513 | 197 | 566 | 6.36e-60 | 209 |
MS.gene41329.t1 | MTR_4g081850 | 38.676 | 287 | 153 | 3 | 125 | 411 | 189 | 452 | 8.74e-58 | 203 |
MS.gene41329.t1 | MTR_4g050490 | 27.389 | 314 | 188 | 5 | 136 | 411 | 162 | 473 | 2.83e-27 | 117 |
MS.gene41329.t1 | MTR_7g056733 | 86.000 | 50 | 7 | 0 | 39 | 88 | 39 | 88 | 3.68e-21 | 88.6 |
MS.gene41329.t1 | MTR_7g094890 | 29.268 | 205 | 123 | 5 | 144 | 346 | 119 | 303 | 8.59e-14 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41329.t1 | AT3G07050 | 64.950 | 602 | 180 | 8 | 1 | 595 | 1 | 578 | 0.0 | 662 |
MS.gene41329.t1 | AT1G52980 | 38.235 | 306 | 166 | 3 | 125 | 430 | 199 | 481 | 1.07e-58 | 206 |
MS.gene41329.t1 | AT2G27200 | 28.479 | 309 | 188 | 5 | 136 | 411 | 161 | 469 | 1.04e-30 | 127 |
MS.gene41329.t1 | AT1G08410 | 27.900 | 319 | 193 | 5 | 136 | 417 | 161 | 479 | 3.17e-30 | 125 |
MS.gene41329.t1 | AT4G02790 | 29.720 | 286 | 153 | 10 | 144 | 412 | 118 | 372 | 1.48e-15 | 79.3 |
Find 128 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCTGCTCGCCTCAATTT+TGG | 0.124286 | 1.2:+31088373 | None:intergenic |
TTCAATTCCTGTTCCTTAAA+AGG | 0.143573 | 1.2:+31093688 | None:intergenic |
AAAGCAATACATGACGTTTA+TGG | 0.143814 | 1.2:+31092294 | None:intergenic |
AATAGTGAAACTTCATTTAT+TGG | 0.146286 | 1.2:-31089023 | MS.gene41329:CDS |
TTGCAGAGAGTAAGAGTAAA+AGG | 0.149807 | 1.2:-31093846 | MS.gene41329:intron |
TATGCTCTTTCACTTTCTTT+AGG | 0.222156 | 1.2:+31093797 | None:intergenic |
CTTCAAGTACCTGGGCTAAT+TGG | 0.236805 | 1.2:+31090621 | None:intergenic |
TAAAGTTGATTACTTCAAAA+AGG | 0.281092 | 1.2:-31088287 | MS.gene41329:CDS |
TCTTGTTTCAGGCTCGTAAA+AGG | 0.281841 | 1.2:-31092663 | MS.gene41329:intron |
TACAGATTGTGGCTACTGTT+AGG | 0.291683 | 1.2:-31089322 | MS.gene41329:CDS |
AGAAGCCGTTTCAACTGAAT+TGG | 0.312062 | 1.2:+31092609 | None:intergenic |
TAGGGCCTTTGCCAGTGATT+TGG | 0.321863 | 1.2:-31092423 | MS.gene41329:CDS |
ATAGTGAAACTTCATTTATT+GGG | 0.325794 | 1.2:-31089022 | MS.gene41329:CDS |
AAGCAATACATGACGTTTAT+GGG | 0.328299 | 1.2:+31092295 | None:intergenic |
ACTGGAGGCATAGTATAATA+TGG | 0.337606 | 1.2:+31089122 | None:intergenic |
AGAACGTGCTCTTGCTGAAT+TGG | 0.338023 | 1.2:-31093647 | MS.gene41329:CDS |
TCCTTAAAAGGCCAATCATT+TGG | 0.343965 | 1.2:+31093700 | None:intergenic |
ATTATACTATGCCTCCAGTT+AGG | 0.353971 | 1.2:-31089118 | MS.gene41329:CDS |
GACATCAATCACTGTTGGTT+TGG | 0.362256 | 1.2:-31090868 | MS.gene41329:CDS |
CAATGATGAGGATGAATCTA+TGG | 0.362444 | 1.2:-31088488 | MS.gene41329:CDS |
CTTTGATGAGACAATGTTAG+AGG | 0.363951 | 1.2:-31088940 | MS.gene41329:intron |
AGAAAACTCTGAAACTATCT+TGG | 0.371936 | 1.2:+31089073 | None:intergenic |
GTCGATGTCAGTGCTAGTGC+TGG | 0.375077 | 1.2:-31090786 | MS.gene41329:CDS |
GTTCTTCATGACTGGAATAT+AGG | 0.376417 | 1.2:-31089248 | MS.gene41329:intron |
CCTTGATGCCCGGGATCCCT+TGG | 0.391586 | 1.2:-31092363 | MS.gene41329:CDS |
TTGCCCTGGTGTTGTCATGC+TGG | 0.392424 | 1.2:-31090709 | MS.gene41329:CDS |
CTTTGCCAGTGATTTGGATC+AGG | 0.403021 | 1.2:-31092417 | MS.gene41329:CDS |
ACAGATTGTGGCTACTGTTA+GGG | 0.404092 | 1.2:-31089321 | MS.gene41329:CDS |
TCAATCACTGTTGGTTTGGT+TGG | 0.404100 | 1.2:-31090864 | MS.gene41329:CDS |
TTTCCATAGATAGTTCAGAT+AGG | 0.404505 | 1.2:-31092442 | MS.gene41329:intron |
CGCAACAGTAGGAACAGTTT+CGG | 0.415285 | 1.2:+31092576 | None:intergenic |
AACACCGAGGTTCCCATGTC+TGG | 0.423048 | 1.2:-31088202 | MS.gene41329:CDS |
GGTTCTCCTTGATCCCTAAC+TGG | 0.438774 | 1.2:+31089104 | None:intergenic |
TTATACTATGCCTCCAGTTA+GGG | 0.449445 | 1.2:-31089117 | MS.gene41329:CDS |
TACTAGAGGTCCTTGATGCC+CGG | 0.453164 | 1.2:-31092373 | MS.gene41329:CDS |
AACGAGTACCCAAGGGATCC+CGG | 0.456156 | 1.2:+31092354 | None:intergenic |
GTCAAAGCAAGAGATTCGTT+TGG | 0.461640 | 1.2:-31090754 | MS.gene41329:CDS |
CTTGATGCCCGGGATCCCTT+GGG | 0.462440 | 1.2:-31092362 | MS.gene41329:CDS |
ATCCTGGTATTCCAAATGAT+TGG | 0.467524 | 1.2:-31093711 | MS.gene41329:CDS |
CAAGAATCGTTCTTCATGAC+TGG | 0.469526 | 1.2:-31089256 | MS.gene41329:CDS |
GGCCAATCATTTGGAATACC+AGG | 0.469715 | 1.2:+31093709 | None:intergenic |
ACTGTTGCGAAGACTAATAA+AGG | 0.470225 | 1.2:-31092562 | MS.gene41329:intron |
TCATTGTCATCAACATTCTC+AGG | 0.473233 | 1.2:+31088505 | None:intergenic |
TCAATTAAGTGGTAAGAAGA+AGG | 0.475631 | 1.2:-31093743 | MS.gene41329:CDS |
AGAAAGAAGCTCGTAAAGAA+AGG | 0.477638 | 1.2:-31093618 | MS.gene41329:CDS |
TTCCATAGATAGTTCAGATA+GGG | 0.481540 | 1.2:-31092441 | MS.gene41329:intron |
AGACTACTCTTACCAACATT+GGG | 0.485202 | 1.2:+31090837 | None:intergenic |
TGATAAAGAGGATGTTAGCA+AGG | 0.486446 | 1.2:-31088461 | MS.gene41329:CDS |
CAGGCTCGTAAAAGGAAGGC+GGG | 0.492005 | 1.2:-31092655 | MS.gene41329:CDS |
AAGACTACTCTTACCAACAT+TGG | 0.493721 | 1.2:+31090836 | None:intergenic |
TCATCAACTGAATCAAAACT+TGG | 0.498766 | 1.2:+31089350 | None:intergenic |
ATGCCTCCAGTTAGGGATCA+AGG | 0.503827 | 1.2:-31089110 | MS.gene41329:CDS |
AAGATGAGAGGGCAACTTGA+AGG | 0.504734 | 1.2:+31088960 | None:intergenic |
TAACTCCAATTCAGTTGAAA+CGG | 0.507020 | 1.2:-31092614 | MS.gene41329:CDS |
ATCTATGGAAAGTGATAAAG+AGG | 0.508499 | 1.2:-31088473 | MS.gene41329:CDS |
TGCAGAGAGTAAGAGTAAAA+GGG | 0.510138 | 1.2:-31093845 | MS.gene41329:intron |
ATCAACCTCAACACCAGACA+TGG | 0.513629 | 1.2:+31088189 | None:intergenic |
AAGAAGGTTGAGAAAGATCC+TGG | 0.515836 | 1.2:-31093727 | MS.gene41329:CDS |
ATCCATGGGATCAGATGAGC+TGG | 0.517172 | 1.2:+31088324 | None:intergenic |
CCAAGGGATCCCGGGCATCA+AGG | 0.518140 | 1.2:+31092363 | None:intergenic |
AAAGTCATAATCACCATCCA+TGG | 0.524728 | 1.2:+31088309 | None:intergenic |
GGATGACAAAGCAGTTAAGT+TGG | 0.529915 | 1.2:-31088545 | MS.gene41329:CDS |
AGAGGATGTTAGCAAGGAGA+AGG | 0.531320 | 1.2:-31088455 | MS.gene41329:CDS |
GAAAGAAGCTCGTAAAGAAA+GGG | 0.534276 | 1.2:-31093617 | MS.gene41329:intron |
AGAGATATCAGCACCCTAGC+GGG | 0.534816 | 1.2:+31089383 | None:intergenic |
TTCTCAAGCTCTGTCCCGCT+AGG | 0.535798 | 1.2:-31089397 | MS.gene41329:CDS |
AGCCAGCTCATCTGATCCCA+TGG | 0.543549 | 1.2:-31088326 | MS.gene41329:CDS |
ACTAGAGGTCCTTGATGCCC+GGG | 0.544113 | 1.2:-31092372 | MS.gene41329:CDS |
CTCAAGACATCAATCACTGT+TGG | 0.544568 | 1.2:-31090873 | MS.gene41329:CDS |
GAAACTATCTTGGCCTCTGA+AGG | 0.545238 | 1.2:+31089083 | None:intergenic |
TGTTAGGGGCAAGCTCAAGA+AGG | 0.553084 | 1.2:-31089306 | MS.gene41329:CDS |
TGATGACTTCCTACAGATTG+TGG | 0.555283 | 1.2:-31089333 | MS.gene41329:CDS |
TTGGTTGGACTGCCCAATGT+TGG | 0.564722 | 1.2:-31090849 | MS.gene41329:CDS |
CTCGAGAGTCAGTTGAGAAG+TGG | 0.566914 | 1.2:-31092165 | MS.gene41329:CDS |
GTTAAGTTGCTGGATTGCCC+TGG | 0.568716 | 1.2:-31090723 | MS.gene41329:CDS |
GGTTCCCATGTCTGGTGTTG+AGG | 0.568722 | 1.2:-31088194 | MS.gene41329:CDS |
TGCACTTGAAAGCGACAGTA+GGG | 0.569257 | 1.2:+31092119 | None:intergenic |
ACGAGTACCCAAGGGATCCC+GGG | 0.570844 | 1.2:+31092355 | None:intergenic |
CTGCACTTGAAAGCGACAGT+AGG | 0.571229 | 1.2:+31092118 | None:intergenic |
ACATGATCTAACTCAACAGT+AGG | 0.573759 | 1.2:+31088990 | None:intergenic |
TCGATGTCAGTGCTAGTGCT+GGG | 0.574430 | 1.2:-31090785 | MS.gene41329:CDS |
TTGCAATTAAGTGATTGTCT+CGG | 0.574961 | 1.2:-31092037 | MS.gene41329:CDS |
CTGATCCAAATCACTGGCAA+AGG | 0.574966 | 1.2:+31092418 | None:intergenic |
TTATTAGTCTTCGCAACAGT+AGG | 0.576810 | 1.2:+31092565 | None:intergenic |
GAGTCCAGCATGACAACACC+AGG | 0.578166 | 1.2:+31090705 | None:intergenic |
AAGGAAGGCGGGGTTGCCAG+TGG | 0.578828 | 1.2:-31092644 | MS.gene41329:CDS |
TAAAGAGTTTAACATTGATG+AGG | 0.580829 | 1.2:-31089051 | MS.gene41329:CDS |
AGGACACGATGGATGCTGAC+GGG | 0.582177 | 1.2:-31088267 | MS.gene41329:CDS |
GTGCTAGTGCTGGGTCGACA+AGG | 0.591514 | 1.2:-31090776 | MS.gene41329:CDS |
GTTTCAGGCTCGTAAAAGGA+AGG | 0.594629 | 1.2:-31092659 | MS.gene41329:intron |
TCTCAAGCTCTGTCCCGCTA+GGG | 0.595120 | 1.2:-31089396 | MS.gene41329:CDS |
AACACCAGACATGGGAACCT+CGG | 0.595303 | 1.2:+31088198 | None:intergenic |
GAGAAGTTATATACAGCGGA+AGG | 0.595344 | 1.2:-31088406 | MS.gene41329:CDS |
GTATACTTAATCCAAAATTG+AGG | 0.598349 | 1.2:-31088384 | MS.gene41329:CDS |
GTTAACACAACGAGTACCCA+AGG | 0.598523 | 1.2:+31092346 | None:intergenic |
AATAACCTGATCCAAATCAC+TGG | 0.599929 | 1.2:+31092412 | None:intergenic |
AAGTTGGCAAAACAAGATGA+AGG | 0.603504 | 1.2:-31088529 | MS.gene41329:CDS |
TTGTCTCATCAAAGATGAGA+GGG | 0.604223 | 1.2:+31088949 | None:intergenic |
CAGATTGTGGCTACTGTTAG+GGG | 0.604493 | 1.2:-31089320 | MS.gene41329:CDS |
AGCTCATCTGATCCCATGGA+TGG | 0.607612 | 1.2:-31088322 | MS.gene41329:CDS |
CACTTCTCAACTGACTCTCG+AGG | 0.609711 | 1.2:+31092166 | None:intergenic |
TTGGAGTTATCATCATCCAC+TGG | 0.612027 | 1.2:+31092628 | None:intergenic |
TTAGCTGATCCAATTAGCCC+AGG | 0.614684 | 1.2:-31090630 | MS.gene41329:intron |
AAGTCATAATCACCATCCAT+GGG | 0.620040 | 1.2:+31088310 | None:intergenic |
TAACAGTAGCCACAATCTGT+AGG | 0.620654 | 1.2:+31089324 | None:intergenic |
GTTAGGGGCAAGCTCAAGAA+GGG | 0.621289 | 1.2:-31089305 | MS.gene41329:CDS |
ATTGTCTCATCAAAGATGAG+AGG | 0.635020 | 1.2:+31088948 | None:intergenic |
AAGGACACGATGGATGCTGA+CGG | 0.635872 | 1.2:-31088268 | MS.gene41329:CDS |
TAGCACTGACATCGACAGCA+TGG | 0.638654 | 1.2:+31090793 | None:intergenic |
CAGTAGGGAATTCTTCTCGA+AGG | 0.646359 | 1.2:+31092134 | None:intergenic |
AGGGGCAAGCTCAAGAAGGG+TGG | 0.649554 | 1.2:-31089302 | MS.gene41329:CDS |
TCAGGCTCGTAAAAGGAAGG+CGG | 0.649927 | 1.2:-31092656 | MS.gene41329:intron |
GAATTATGCAAGAAGCGACA+AGG | 0.656552 | 1.2:-31091987 | MS.gene41329:intron |
TCAACCTCAACACCAGACAT+GGG | 0.660182 | 1.2:+31088190 | None:intergenic |
GGATCAAGGAGAACCTTCAG+AGG | 0.661640 | 1.2:-31089096 | MS.gene41329:CDS |
AGAGTCTGATGTCATACTAG+AGG | 0.662679 | 1.2:-31092387 | MS.gene41329:CDS |
ATGGATGCTGACGGGAGTGA+CGG | 0.668896 | 1.2:-31088259 | MS.gene41329:CDS |
TCTCCTTGATCCCTAACTGG+AGG | 0.671867 | 1.2:+31089107 | None:intergenic |
ACTTCTCAACTGACTCTCGA+GGG | 0.678144 | 1.2:+31092167 | None:intergenic |
AGGCTCGTAAAAGGAAGGCG+GGG | 0.684944 | 1.2:-31092654 | MS.gene41329:CDS |
TTAACACAACGAGTACCCAA+GGG | 0.685445 | 1.2:+31092347 | None:intergenic |
GATGCTGACGGGAGTGACGG+TGG | 0.688567 | 1.2:-31088256 | MS.gene41329:CDS |
AAATGAGAAGTTATATACAG+CGG | 0.699343 | 1.2:-31088410 | MS.gene41329:CDS |
GACGGTGGTGACGACAATGA+TGG | 0.707599 | 1.2:-31088241 | MS.gene41329:CDS |
GAATGTTGATGACAATGATG+AGG | 0.708173 | 1.2:-31088500 | MS.gene41329:CDS |
AAGAGATATCAGCACCCTAG+CGG | 0.715395 | 1.2:+31089382 | None:intergenic |
AGTCCAGCATGACAACACCA+GGG | 0.773850 | 1.2:+31090706 | None:intergenic |
TGATGAACAAGTCAACACCG+AGG | 0.841599 | 1.2:-31088215 | MS.gene41329:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAATGAACTTA+TGG | - | chr1.2:31088974-31088993 | MS.gene41329:CDS | 10.0% |
!! | AAACCTTATTATTATTATTA+GGG | - | chr1.2:31090463-31090482 | MS.gene41329:intron | 10.0% |
!! | AAATAAGAGAATTAATTAAT+GGG | + | chr1.2:31091553-31091572 | None:intergenic | 10.0% |
!! | TAAATAAGAGAATTAATTAA+TGG | + | chr1.2:31091554-31091573 | None:intergenic | 10.0% |
!!! | ATTAATTAATTCTCTTATTT+AGG | - | chr1.2:31091553-31091572 | MS.gene41329:intron | 10.0% |
!!! | TTATAAATTTTTCTTACTTT+CGG | + | chr1.2:31092972-31092991 | None:intergenic | 10.0% |
!!! | TTTAGTTTAAACTTTAAAAT+TGG | - | chr1.2:31091977-31091996 | MS.gene41329:intron | 10.0% |
!! | AACATAAAAAATAAAAAGAG+AGG | + | chr1.2:31090210-31090229 | None:intergenic | 15.0% |
!! | AATAAGAGAATTAATTAATG+GGG | + | chr1.2:31091552-31091571 | None:intergenic | 15.0% |
!! | ACATAAAAAATAAAAAGAGA+GGG | + | chr1.2:31090209-31090228 | None:intergenic | 15.0% |
!! | AGATTAAAAATTACAATGAA+AGG | + | chr1.2:31093484-31093503 | None:intergenic | 15.0% |
!! | ATTTATTGTTTGAAAATTGA+TGG | - | chr1.2:31088595-31088614 | MS.gene41329:intron | 15.0% |
!! | GAAACCTTATTATTATTATT+AGG | - | chr1.2:31090462-31090481 | MS.gene41329:intron | 15.0% |
!! | TATGTTAAAACATTAGTATA+AGG | - | chr1.2:31093250-31093269 | MS.gene41329:intron | 15.0% |
!! | TTTATTGTTTGAAAATTGAT+GGG | - | chr1.2:31088596-31088615 | MS.gene41329:intron | 15.0% |
!! | TTTCCCTAATAATAATAATA+AGG | + | chr1.2:31090469-31090488 | None:intergenic | 15.0% |
!!! | AAAAATTAAATTTTGTGAGA+TGG | - | chr1.2:31088630-31088649 | MS.gene41329:intron | 15.0% |
!!! | AAAATTAAATTTTGTGAGAT+GGG | - | chr1.2:31088631-31088650 | MS.gene41329:intron | 15.0% |
!!! | GCAATTTTAATTAAATTTTG+TGG | - | chr1.2:31091768-31091787 | MS.gene41329:intron | 15.0% |
!!! | GTTCATTTTTTTTTTTTTGA+AGG | + | chr1.2:31088971-31088990 | None:intergenic | 15.0% |
!!! | TAATACTGATAATTGTTTTT+AGG | - | chr1.2:31091728-31091747 | MS.gene41329:intron | 15.0% |
!! | AATAGTGAAACTTCATTTAT+TGG | - | chr1.2:31093113-31093132 | MS.gene41329:intron | 20.0% |
!! | ACTTCTAGTATTACAATTTA+TGG | - | chr1.2:31091196-31091215 | MS.gene41329:intron | 20.0% |
!! | ATAAGAGAATTAATTAATGG+GGG | + | chr1.2:31091551-31091570 | None:intergenic | 20.0% |
!! | ATAATCACTAAAATGTAGAA+TGG | + | chr1.2:31091148-31091167 | None:intergenic | 20.0% |
!! | ATAATTTCTGCATAAGAAAA+TGG | + | chr1.2:31091644-31091663 | None:intergenic | 20.0% |
!! | ATAGTGAAACTTCATTTATT+GGG | - | chr1.2:31093114-31093133 | MS.gene41329:intron | 20.0% |
!! | ATTTCAAAATTCAGATTTCA+AGG | + | chr1.2:31092657-31092676 | None:intergenic | 20.0% |
!! | GATTAATTAACTAGAACTAT+TGG | - | chr1.2:31089250-31089269 | MS.gene41329:CDS | 20.0% |
!! | TAATTACTAAAGAGAACAAT+AGG | + | chr1.2:31092428-31092447 | None:intergenic | 20.0% |
!! | TCAAATCAAATCAAATCAAA+AGG | + | chr1.2:31088264-31088283 | None:intergenic | 20.0% |
!! | TTGTGTTAACATAGAAAAAA+GGG | - | chr1.2:31089803-31089822 | MS.gene41329:intron | 20.0% |
!! | TTGTTTGTATAATTAAAGTG+AGG | - | chr1.2:31090315-31090334 | MS.gene41329:intron | 20.0% |
!!! | AATAAGTTGAAAACAACTTA+TGG | - | chr1.2:31088936-31088955 | MS.gene41329:intron | 20.0% |
!!! | ATTTTGTACTTTTTCTTCAA+TGG | + | chr1.2:31088319-31088338 | None:intergenic | 20.0% |
!!! | GTATTGCTTTTGAATAAAAT+TGG | - | chr1.2:31089855-31089874 | MS.gene41329:intron | 20.0% |
!!! | TAAAAGTACAGATAAAAACT+AGG | + | chr1.2:31092271-31092290 | None:intergenic | 20.0% |
!!! | TAAAGTTGATTACTTCAAAA+AGG | - | chr1.2:31093849-31093868 | MS.gene41329:intron | 20.0% |
!!! | TAATATTCGATTTGATTGAT+GGG | - | chr1.2:31093357-31093376 | MS.gene41329:intron | 20.0% |
!!! | TAGTTGAAGTATATTTTATG+AGG | - | chr1.2:31088785-31088804 | MS.gene41329:intron | 20.0% |
!!! | TATTTTATGAGGATTAGATT+TGG | - | chr1.2:31088796-31088815 | MS.gene41329:intron | 20.0% |
!!! | TTAATATTCGATTTGATTGA+TGG | - | chr1.2:31093356-31093375 | MS.gene41329:intron | 20.0% |
! | AAAACATGTATAGAATCTCA+AGG | + | chr1.2:31091892-31091911 | None:intergenic | 25.0% |
! | AAATGAGAAGTTATATACAG+CGG | - | chr1.2:31093726-31093745 | MS.gene41329:CDS | 25.0% |
! | AAATTGAAGAAGTGATGAAA+GGG | + | chr1.2:31088215-31088234 | None:intergenic | 25.0% |
! | ACTCAAAAGGTAAAGATAAT+AGG | + | chr1.2:31091939-31091958 | None:intergenic | 25.0% |
! | AGACAAAGCCAAAATAATTA+CGG | + | chr1.2:31091237-31091256 | None:intergenic | 25.0% |
! | ATAATAAGAGTTATGCTAAC+CGG | + | chr1.2:31090655-31090674 | None:intergenic | 25.0% |
! | ATATCTTGTAAAATTGACGA+GGG | + | chr1.2:31090808-31090827 | None:intergenic | 25.0% |
! | ATGAAAAAAATATTCCCAGA+AGG | + | chr1.2:31089914-31089933 | None:intergenic | 25.0% |
! | ATTCATATGCTTTGTATTTC+TGG | - | chr1.2:31090721-31090740 | MS.gene41329:CDS | 25.0% |
! | ATTTATAATTGCACTGTTTC+AGG | - | chr1.2:31092984-31093003 | MS.gene41329:intron | 25.0% |
! | CAATATATTTAGCACTCAAA+AGG | + | chr1.2:31091952-31091971 | None:intergenic | 25.0% |
! | CTAGATAAGTCAATCTAAAT+AGG | - | chr1.2:31089042-31089061 | MS.gene41329:CDS | 25.0% |
! | CTGGAAAAACAAATTGAAAA+GGG | + | chr1.2:31093572-31093591 | None:intergenic | 25.0% |
! | GGTCTTTATTCTTTAATCAA+CGG | + | chr1.2:31092208-31092227 | None:intergenic | 25.0% |
! | GTATACTTAATCCAAAATTG+AGG | - | chr1.2:31093752-31093771 | MS.gene41329:CDS | 25.0% |
! | GTTGTGTTAACATAGAAAAA+AGG | - | chr1.2:31089802-31089821 | MS.gene41329:intron | 25.0% |
! | TAAAGAGTTTAACATTGATG+AGG | - | chr1.2:31093085-31093104 | MS.gene41329:intron | 25.0% |
! | TATATCTTGTAAAATTGACG+AGG | + | chr1.2:31090809-31090828 | None:intergenic | 25.0% |
! | TCAAATCAAATCAAAAGGAT+TGG | + | chr1.2:31088259-31088278 | None:intergenic | 25.0% |
! | TCAGTGTTATGTAATTTCTA+TGG | - | chr1.2:31090846-31090865 | MS.gene41329:CDS | 25.0% |
! | TCATAAATCAAATTTCAACC+AGG | + | chr1.2:31092244-31092263 | None:intergenic | 25.0% |
! | TGAAAAAAATATTCCCAGAA+GGG | + | chr1.2:31089913-31089932 | None:intergenic | 25.0% |
! | TGCAAGTGTTCTTATAAATA+TGG | - | chr1.2:31090247-31090266 | MS.gene41329:intron | 25.0% |
! | TGCATAAAGAAACAAACAAA+TGG | + | chr1.2:31090977-31090996 | None:intergenic | 25.0% |
!! | AATTTTTCTTACTTTCGGAA+AGG | + | chr1.2:31092967-31092986 | None:intergenic | 25.0% |
!! | CAATCAAAATCTCAGAATTT+TGG | + | chr1.2:31093415-31093434 | None:intergenic | 25.0% |
!! | CTATTTTGCCGTAATTATTT+TGG | - | chr1.2:31091226-31091245 | MS.gene41329:intron | 25.0% |
!! | GGATGTTATCAATACTATTT+TGG | - | chr1.2:31090421-31090440 | MS.gene41329:intron | 25.0% |
!! | TCTTATTTAGGTCTTCATAT+TGG | - | chr1.2:31091565-31091584 | MS.gene41329:intron | 25.0% |
!! | TTTTGTGGAATTGAAACTAA+GGG | - | chr1.2:31092016-31092035 | MS.gene41329:CDS | 25.0% |
!! | TTTTTGTGGAATTGAAACTA+AGG | - | chr1.2:31092015-31092034 | MS.gene41329:CDS | 25.0% |
!!! | ATACATGTTTCTTTTGAAGT+TGG | - | chr1.2:31092921-31092940 | MS.gene41329:intron | 25.0% |
!!! | CAAAATTCTGAGATTTTGAT+TGG | - | chr1.2:31093413-31093432 | MS.gene41329:intron | 25.0% |
!!! | TCTATTTTTAACTCCTTAAC+CGG | - | chr1.2:31090616-31090635 | MS.gene41329:intron | 25.0% |
!!! | TTCTTTTGAAGTTGGAAATT+AGG | - | chr1.2:31092929-31092948 | MS.gene41329:intron | 25.0% |
AAAGAGGTTACATGAAGTTT+GGG | - | chr1.2:31092127-31092146 | MS.gene41329:CDS | 30.0% | |
AAAGATCCATCGATATAGTA+AGG | - | chr1.2:31092158-31092177 | MS.gene41329:CDS | 30.0% | |
AAAGCAATACATGACGTTTA+TGG | + | chr1.2:31089845-31089864 | None:intergenic | 30.0% | |
AACACACTACAAACTGAATA+GGG | + | chr1.2:31093525-31093544 | None:intergenic | 30.0% | |
AACAGCAAAAATCAAACCTA+GGG | - | chr1.2:31090046-31090065 | MS.gene41329:intron | 30.0% | |
AAGATCCATCGATATAGTAA+GGG | - | chr1.2:31092159-31092178 | MS.gene41329:CDS | 30.0% | |
AAGCAATACATGACGTTTAT+GGG | + | chr1.2:31089844-31089863 | None:intergenic | 30.0% | |
AAGGAGAAACATGAATGATA+AGG | + | chr1.2:31090773-31090792 | None:intergenic | 30.0% | |
AATTTGGCACTTGTATGTTT+GGG | - | chr1.2:31091003-31091022 | MS.gene41329:intron | 30.0% | |
ACCTCTTTCAAATAAGAACT+AGG | + | chr1.2:31092115-31092134 | None:intergenic | 30.0% | |
AGAAGTGAAGTTACAAGAAT+TGG | + | chr1.2:31091182-31091201 | None:intergenic | 30.0% | |
AGAGAAGAAGAAAAAGAAGA+AGG | - | chr1.2:31093780-31093799 | MS.gene41329:CDS | 30.0% | |
AGATAATAGGTTACTGGTAT+TGG | + | chr1.2:31091926-31091945 | None:intergenic | 30.0% | |
AGGAGAAACATGAATGATAA+GGG | + | chr1.2:31090772-31090791 | None:intergenic | 30.0% | |
AGGTAAAGATAATAGGTTAC+TGG | + | chr1.2:31091932-31091951 | None:intergenic | 30.0% | |
ATCTATGGAAAGTGATAAAG+AGG | - | chr1.2:31093663-31093682 | MS.gene41329:CDS | 30.0% | |
ATTAACCTCATTATCCAAAC+AGG | + | chr1.2:31088836-31088855 | None:intergenic | 30.0% | |
ATTTCTGCATAAGAAAATGG+AGG | + | chr1.2:31091641-31091660 | None:intergenic | 30.0% | |
CAATTAACTAACTAGAAAGC+AGG | + | chr1.2:31092517-31092536 | None:intergenic | 30.0% | |
CCTGGAAAAACAAATTGAAA+AGG | + | chr1.2:31093573-31093592 | None:intergenic | 30.0% | |
GAAATTGAAGAAGTGATGAA+AGG | + | chr1.2:31088216-31088235 | None:intergenic | 30.0% | |
GAAGTGAAGTTACAAGAATT+GGG | + | chr1.2:31091181-31091200 | None:intergenic | 30.0% | |
GATAATAGGTTACTGGTATT+GGG | + | chr1.2:31091925-31091944 | None:intergenic | 30.0% | |
GCTAAAAAGCTTCAATTAAG+TGG | - | chr1.2:31088382-31088401 | MS.gene41329:CDS | 30.0% | |
GTATAGAATCTCAAGGTAAA+GGG | + | chr1.2:31091885-31091904 | None:intergenic | 30.0% | |
TAACACACTACAAACTGAAT+AGG | + | chr1.2:31093526-31093545 | None:intergenic | 30.0% | |
TAACTCCAATTCAGTTGAAA+CGG | - | chr1.2:31089522-31089541 | MS.gene41329:intron | 30.0% | |
TATGCTCTTTCACTTTCTTT+AGG | + | chr1.2:31088342-31088361 | None:intergenic | 30.0% | |
TATGTTGTGTTATGACTGTA+TGG | - | chr1.2:31089381-31089400 | MS.gene41329:CDS | 30.0% | |
TCAATTAAGTGGTAAGAAGA+AGG | - | chr1.2:31088393-31088412 | MS.gene41329:CDS | 30.0% | |
TCATCAACTGAATCAAAACT+TGG | + | chr1.2:31092789-31092808 | None:intergenic | 30.0% | |
TCTTTATGCATGCATGAATT+TGG | - | chr1.2:31090987-31091006 | MS.gene41329:intron | 30.0% | |
TCTTTCAAATAAGAACTAGG+TGG | + | chr1.2:31092112-31092131 | None:intergenic | 30.0% | |
TGGATAATGAGGTTAATTGA+GGG | - | chr1.2:31088839-31088858 | MS.gene41329:intron | 30.0% | |
TGTATAGAATCTCAAGGTAA+AGG | + | chr1.2:31091886-31091905 | None:intergenic | 30.0% | |
TTAACATAGAAAAAAGGGTG+AGG | - | chr1.2:31089808-31089827 | MS.gene41329:intron | 30.0% | |
TTAACCTCATTATCCAAACA+GGG | + | chr1.2:31088835-31088854 | None:intergenic | 30.0% | |
TTCAATTCCTGTTCCTTAAA+AGG | + | chr1.2:31088451-31088470 | None:intergenic | 30.0% | |
TTCCATAGATAGTTCAGATA+GGG | - | chr1.2:31089695-31089714 | MS.gene41329:intron | 30.0% | |
TTGCAATTAAGTGATTGTCT+CGG | - | chr1.2:31090099-31090118 | MS.gene41329:intron | 30.0% | |
TTGGATAATGAGGTTAATTG+AGG | - | chr1.2:31088838-31088857 | MS.gene41329:intron | 30.0% | |
TTTCCATAGATAGTTCAGAT+AGG | - | chr1.2:31089694-31089713 | MS.gene41329:intron | 30.0% | |
TTTCTGCATAAGAAAATGGA+GGG | + | chr1.2:31091640-31091659 | None:intergenic | 30.0% | |
! | AAATTGACACGCATCTATTT+TGG | - | chr1.2:31093285-31093304 | MS.gene41329:intron | 30.0% |
! | ACCTAGTTCTTATTTGAAAG+AGG | - | chr1.2:31092111-31092130 | MS.gene41329:CDS | 30.0% |
! | CAAAATCTCAGAATTTTGGA+GGG | + | chr1.2:31093411-31093430 | None:intergenic | 30.0% |
! | CAGCATTTGTGAAACTTTTT+AGG | + | chr1.2:31089016-31089035 | None:intergenic | 30.0% |
! | CGATACTTTTCATGTTATAC+TGG | - | chr1.2:31091040-31091059 | MS.gene41329:intron | 30.0% |
! | CTATTACACTATTTTCTCTC+TGG | - | chr1.2:31092292-31092311 | MS.gene41329:CDS | 30.0% |
! | CTTGAGATTACAAGTTTTAC+CGG | + | chr1.2:31089113-31089132 | None:intergenic | 30.0% |
! | GGAAGTCTAATCCTTTTTAT+TGG | - | chr1.2:31092698-31092717 | MS.gene41329:intron | 30.0% |
! | TCAAAATCTCAGAATTTTGG+AGG | + | chr1.2:31093412-31093431 | None:intergenic | 30.0% |
! | TTAGTATAAGGAAAGTGTGT+TGG | - | chr1.2:31093262-31093281 | MS.gene41329:intron | 30.0% |
! | TTGAGATTACAAGTTTTACC+GGG | + | chr1.2:31089112-31089131 | None:intergenic | 30.0% |
!! | AGAAAACTCTGAAACTATCT+TGG | + | chr1.2:31093066-31093085 | None:intergenic | 30.0% |
!! | ATCAGAGATGTTACTTTATG+TGG | - | chr1.2:31090366-31090385 | MS.gene41329:intron | 30.0% |
!! | CCTTTTCAATTTGTTTTTCC+AGG | - | chr1.2:31093570-31093589 | MS.gene41329:intron | 30.0% |
!! | GTATAACATGAAAAGTATCG+TGG | + | chr1.2:31091040-31091059 | None:intergenic | 30.0% |
!! | TCAGAGATGTTACTTTATGT+GGG | - | chr1.2:31090367-31090386 | MS.gene41329:intron | 30.0% |
!!! | TGATTTTTTTAGATCTCCCT+AGG | + | chr1.2:31090065-31090084 | None:intergenic | 30.0% |
!!! | TTGAAGCTTTTTAGCTTCTT+TGG | + | chr1.2:31088377-31088396 | None:intergenic | 30.0% |
AAAGTCATAATCACCATCCA+TGG | + | chr1.2:31093830-31093849 | None:intergenic | 35.0% | |
AAATATTCCCAGAAGGGAAA+AGG | + | chr1.2:31089907-31089926 | None:intergenic | 35.0% | |
AAGACTACTCTTACCAACAT+TGG | + | chr1.2:31091303-31091322 | None:intergenic | 35.0% | |
AAGAGGTTACATGAAGTTTG+GGG | - | chr1.2:31092128-31092147 | MS.gene41329:CDS | 35.0% | |
AAGCAGGATCAATATTGTGA+AGG | + | chr1.2:31092501-31092520 | None:intergenic | 35.0% | |
AAGTCATAATCACCATCCAT+GGG | + | chr1.2:31093829-31093848 | None:intergenic | 35.0% | |
AAGTCATGTCTTAGTGCTTT+AGG | + | chr1.2:31092368-31092387 | None:intergenic | 35.0% | |
AAGTTGGCAAAACAAGATGA+AGG | - | chr1.2:31093607-31093626 | MS.gene41329:intron | 35.0% | |
AATAACCTGATCCAAATCAC+TGG | + | chr1.2:31089727-31089746 | None:intergenic | 35.0% | |
AATATTCCCAGAAGGGAAAA+GGG | + | chr1.2:31089906-31089925 | None:intergenic | 35.0% | |
ACATGATCTAACTCAACAGT+AGG | + | chr1.2:31093149-31093168 | None:intergenic | 35.0% | |
ACTGTTGCGAAGACTAATAA+AGG | - | chr1.2:31089574-31089593 | MS.gene41329:intron | 35.0% | |
AGAAAGAAGCTCGTAAAGAA+AGG | - | chr1.2:31088518-31088537 | MS.gene41329:CDS | 35.0% | |
AGACTACTCTTACCAACATT+GGG | + | chr1.2:31091302-31091321 | None:intergenic | 35.0% | |
AGGGAGCTAAAACTAACTTA+AGG | + | chr1.2:31093392-31093411 | None:intergenic | 35.0% | |
ATCCTGGTATTCCAAATGAT+TGG | - | chr1.2:31088425-31088444 | MS.gene41329:CDS | 35.0% | |
ATGGATGAAAAGATAGGATC+AGG | + | chr1.2:31092457-31092476 | None:intergenic | 35.0% | |
ATTATACTATGCCTCCAGTT+AGG | - | chr1.2:31093018-31093037 | MS.gene41329:intron | 35.0% | |
ATTGTCTCATCAAAGATGAG+AGG | + | chr1.2:31093191-31093210 | None:intergenic | 35.0% | |
CAACAGCAAAAATCAAACCT+AGG | - | chr1.2:31090045-31090064 | MS.gene41329:intron | 35.0% | |
CAACGGAACTTGAATACAAT+GGG | + | chr1.2:31092191-31092210 | None:intergenic | 35.0% | |
CAATGATGAGGATGAATCTA+TGG | - | chr1.2:31093648-31093667 | MS.gene41329:CDS | 35.0% | |
CACTGCATTGTCCAATAAAA+AGG | + | chr1.2:31092712-31092731 | None:intergenic | 35.0% | |
CAGCTTACATAAGCACTTAT+AGG | + | chr1.2:31088885-31088904 | None:intergenic | 35.0% | |
CAGTATTAGAGTCTAGAAGA+GGG | + | chr1.2:31091716-31091735 | None:intergenic | 35.0% | |
CGGTAAAACTTGTAATCTCA+AGG | - | chr1.2:31089111-31089130 | MS.gene41329:CDS | 35.0% | |
CTGGGTTAAGGAGTTATAAA+AGG | - | chr1.2:31090512-31090531 | MS.gene41329:intron | 35.0% | |
CTTTGATGAGACAATGTTAG+AGG | - | chr1.2:31093196-31093215 | MS.gene41329:intron | 35.0% | |
GAAAGAAGCTCGTAAAGAAA+GGG | - | chr1.2:31088519-31088538 | MS.gene41329:CDS | 35.0% | |
GAAAGAGGTTACATGAAGTT+TGG | - | chr1.2:31092126-31092145 | MS.gene41329:CDS | 35.0% | |
GAACTAAGCTCAAGTTACTT+TGG | - | chr1.2:31089133-31089152 | MS.gene41329:CDS | 35.0% | |
GAATTTGGCACTTGTATGTT+TGG | - | chr1.2:31091002-31091021 | MS.gene41329:intron | 35.0% | |
GAGAATTAATTAATGGGGGA+AGG | + | chr1.2:31091547-31091566 | None:intergenic | 35.0% | |
GTTATCATGATCTCAGTTGA+AGG | - | chr1.2:31091851-31091870 | MS.gene41329:intron | 35.0% | |
GTTCTTCATGACTGGAATAT+AGG | - | chr1.2:31092888-31092907 | MS.gene41329:intron | 35.0% | |
TCAACGGAACTTGAATACAA+TGG | + | chr1.2:31092192-31092211 | None:intergenic | 35.0% | |
TCAGTATTAGAGTCTAGAAG+AGG | + | chr1.2:31091717-31091736 | None:intergenic | 35.0% | |
TCATTGTCATCAACATTCTC+AGG | + | chr1.2:31093634-31093653 | None:intergenic | 35.0% | |
TCCTTAAAAGGCCAATCATT+TGG | + | chr1.2:31088439-31088458 | None:intergenic | 35.0% | |
TGATAAAGAGGATGTTAGCA+AGG | - | chr1.2:31093675-31093694 | MS.gene41329:CDS | 35.0% | |
TGCAGAGAGTAAGAGTAAAA+GGG | - | chr1.2:31088291-31088310 | MS.gene41329:CDS | 35.0% | |
TTACTTCAAAAAGGACACGA+TGG | - | chr1.2:31093858-31093877 | MS.gene41329:intron | 35.0% | |
TTATACTATGCCTCCAGTTA+GGG | - | chr1.2:31093019-31093038 | MS.gene41329:intron | 35.0% | |
TTGCAGAGAGTAAGAGTAAA+AGG | - | chr1.2:31088290-31088309 | MS.gene41329:CDS | 35.0% | |
TTGTCTCATCAAAGATGAGA+GGG | + | chr1.2:31093190-31093209 | None:intergenic | 35.0% | |
! | ACTGGAGGCATAGTATAATA+TGG | + | chr1.2:31093017-31093036 | None:intergenic | 35.0% |
! | GATCCTATCTTTTCATCCAT+CGG | - | chr1.2:31092457-31092476 | MS.gene41329:intron | 35.0% |
! | GGACAAAAATGTTAAGTTGC+TGG | - | chr1.2:31091403-31091422 | MS.gene41329:intron | 35.0% |
! | GTAATGCTACTTGAAATGGA+TGG | - | chr1.2:31091589-31091608 | MS.gene41329:intron | 35.0% |
! | TAGAAGCACATGTAATGAGA+GGG | + | chr1.2:31092326-31092345 | None:intergenic | 35.0% |
! | TCATGTCTAACTCTTGTTTC+AGG | - | chr1.2:31089462-31089481 | MS.gene41329:intron | 35.0% |
! | TGGAGTAATGCTACTTGAAA+TGG | - | chr1.2:31091585-31091604 | MS.gene41329:intron | 35.0% |
! | TTAGAAGCACATGTAATGAG+AGG | + | chr1.2:31092327-31092346 | None:intergenic | 35.0% |
! | TTTTGGATGGTCTGTTTGTA+TGG | - | chr1.2:31093302-31093321 | MS.gene41329:intron | 35.0% |
!! | GAATGTTGATGACAATGATG+AGG | - | chr1.2:31093636-31093655 | MS.gene41329:CDS | 35.0% |
!! | TAGGGTCTCTTTTGATTCAA+AGG | + | chr1.2:31093507-31093526 | None:intergenic | 35.0% |
!! | TTATTAGTCTTCGCAACAGT+AGG | + | chr1.2:31089574-31089593 | None:intergenic | 35.0% |
!! | TTTGTGAAACTTTTTAGGCG+AGG | + | chr1.2:31089011-31089030 | None:intergenic | 35.0% |
!!! | AGGCTTGGCTTGATTTTTTT+GGG | + | chr1.2:31092066-31092085 | None:intergenic | 35.0% |
!!! | ATTTTGAAATCCCGACTTTC+AGG | - | chr1.2:31092667-31092686 | MS.gene41329:intron | 35.0% |
!!! | TCCAAATGATTGGCCTTTTA+AGG | - | chr1.2:31088435-31088454 | MS.gene41329:CDS | 35.0% |
AAATGCTAACTAGTTCCCCT+GGG | - | chr1.2:31090486-31090505 | MS.gene41329:intron | 40.0% | |
AAGAAGGTTGAGAAAGATCC+TGG | - | chr1.2:31088409-31088428 | MS.gene41329:CDS | 40.0% | |
ACAGATTGTGGCTACTGTTA+GGG | - | chr1.2:31092815-31092834 | MS.gene41329:intron | 40.0% | |
ACGAGGGTTTGTAGAACAAA+AGG | + | chr1.2:31090792-31090811 | None:intergenic | 40.0% | |
ACTTAACTGCTTTGTCATCC+TGG | + | chr1.2:31093591-31093610 | None:intergenic | 40.0% | |
AGAAGCCGTTTCAACTGAAT+TGG | + | chr1.2:31089530-31089549 | None:intergenic | 40.0% | |
AGAGTCTGATGTCATACTAG+AGG | - | chr1.2:31089749-31089768 | MS.gene41329:intron | 40.0% | |
ATATTCCCAGAAGGGAAAAG+GGG | + | chr1.2:31089905-31089924 | None:intergenic | 40.0% | |
ATTCCACAAAAAGCAAGCAG+TGG | + | chr1.2:31092007-31092026 | None:intergenic | 40.0% | |
CAAATAAGAACTAGGTGGTG+AGG | + | chr1.2:31092107-31092126 | None:intergenic | 40.0% | |
CAAGAATCGTTCTTCATGAC+TGG | - | chr1.2:31092880-31092899 | MS.gene41329:intron | 40.0% | |
CATGATCTCAGTTGAAGGAA+TGG | - | chr1.2:31091856-31091875 | MS.gene41329:intron | 40.0% | |
CTCAAGACATCAATCACTGT+TGG | - | chr1.2:31091263-31091282 | MS.gene41329:intron | 40.0% | |
CTTCCGATGGATGAAAAGAT+AGG | + | chr1.2:31092463-31092482 | None:intergenic | 40.0% | |
CTTGTGATTCACATGCTTCT+TGG | - | chr1.2:31090400-31090419 | MS.gene41329:intron | 40.0% | |
GAAAATGGAGGGTTATACAG+AGG | + | chr1.2:31091629-31091648 | None:intergenic | 40.0% | |
GAATTATGCAAGAAGCGACA+AGG | - | chr1.2:31090149-31090168 | MS.gene41329:intron | 40.0% | |
GAGAAGTTATATACAGCGGA+AGG | - | chr1.2:31093730-31093749 | MS.gene41329:CDS | 40.0% | |
GGATGACAAAGCAGTTAAGT+TGG | - | chr1.2:31093591-31093610 | MS.gene41329:intron | 40.0% | |
GTCAAAGCAAGAGATTCGTT+TGG | - | chr1.2:31091382-31091401 | MS.gene41329:intron | 40.0% | |
GTGAAGTTACAAGAATTGGG+AGG | + | chr1.2:31091178-31091197 | None:intergenic | 40.0% | |
TAACAGTAGCCACAATCTGT+AGG | + | chr1.2:31092815-31092834 | None:intergenic | 40.0% | |
TACAGATTGTGGCTACTGTT+AGG | - | chr1.2:31092814-31092833 | MS.gene41329:intron | 40.0% | |
TCATGCCCTTACTATATCGA+TGG | + | chr1.2:31092167-31092186 | None:intergenic | 40.0% | |
TCTGTTTGTATGGAGGGAAA+TGG | - | chr1.2:31093312-31093331 | MS.gene41329:intron | 40.0% | |
TGATGACTTCCTACAGATTG+TGG | - | chr1.2:31092803-31092822 | MS.gene41329:intron | 40.0% | |
TTAACACAACGAGTACCCAA+GGG | + | chr1.2:31089792-31089811 | None:intergenic | 40.0% | |
TTGGAGTTATCATCATCCAC+TGG | + | chr1.2:31089511-31089530 | None:intergenic | 40.0% | |
TTGTCCCTGTTTGGATAATG+AGG | - | chr1.2:31088828-31088847 | MS.gene41329:intron | 40.0% | |
TTTGTATGGAGGGAAATGGA+AGG | - | chr1.2:31093316-31093335 | MS.gene41329:intron | 40.0% | |
! | AATAGGTTACTGGTATTGGG+AGG | + | chr1.2:31091922-31091941 | None:intergenic | 40.0% |
! | ATAGGTTACTGGTATTGGGA+GGG | + | chr1.2:31091921-31091940 | None:intergenic | 40.0% |
! | CCAGAAAGGAGCATAAAAGA+TGG | + | chr1.2:31091802-31091821 | None:intergenic | 40.0% |
! | CCATCTTTTATGCTCCTTTC+TGG | - | chr1.2:31091799-31091818 | MS.gene41329:intron | 40.0% |
! | GACATCAATCACTGTTGGTT+TGG | - | chr1.2:31091268-31091287 | MS.gene41329:intron | 40.0% |
! | TCTTAGTGCTTTAGGCATGT+GGG | + | chr1.2:31092360-31092379 | None:intergenic | 40.0% |
! | TCTTGTTTCAGGCTCGTAAA+AGG | - | chr1.2:31089473-31089492 | MS.gene41329:intron | 40.0% |
! | TGCTACTTGAAATGGATGGT+TGG | - | chr1.2:31091593-31091612 | MS.gene41329:intron | 40.0% |
! | TTTACCGGGACAACAAGTTT+TGG | + | chr1.2:31089098-31089117 | None:intergenic | 40.0% |
!! | CTTTCCAAAACTTGTTGTCC+CGG | - | chr1.2:31089091-31089110 | MS.gene41329:CDS | 40.0% |
!! | TCAATCACTGTTGGTTTGGT+TGG | - | chr1.2:31091272-31091291 | MS.gene41329:intron | 40.0% |
!! | TGACACGCATCTATTTTGGA+TGG | - | chr1.2:31093289-31093308 | MS.gene41329:intron | 40.0% |
!!! | GAGGCTTGGCTTGATTTTTT+TGG | + | chr1.2:31092067-31092086 | None:intergenic | 40.0% |
!!! | GGCTTGGCTTGATTTTTTTG+GGG | + | chr1.2:31092065-31092084 | None:intergenic | 40.0% |
!!! | TGATTGGCCTTTTAAGGAAC+AGG | - | chr1.2:31088441-31088460 | MS.gene41329:CDS | 40.0% |
!!! | TTACCACTGCTTGCTTTTTG+TGG | - | chr1.2:31092001-31092020 | MS.gene41329:CDS | 40.0% |
AAGAGATATCAGCACCCTAG+CGG | + | chr1.2:31092757-31092776 | None:intergenic | 45.0% | |
AAGATGAGAGGGCAACTTGA+AGG | + | chr1.2:31093179-31093198 | None:intergenic | 45.0% | |
AATGCTAACTAGTTCCCCTG+GGG | - | chr1.2:31090487-31090506 | MS.gene41329:intron | 45.0% | |
AGAACGTGCTCTTGCTGAAT+TGG | - | chr1.2:31088489-31088508 | MS.gene41329:CDS | 45.0% | |
AGAGGATGTTAGCAAGGAGA+AGG | - | chr1.2:31093681-31093700 | MS.gene41329:CDS | 45.0% | |
AGGAGATGACTTCAAGTACC+TGG | + | chr1.2:31091527-31091546 | None:intergenic | 45.0% | |
ATCAACCTCAACACCAGACA+TGG | + | chr1.2:31093950-31093969 | None:intergenic | 45.0% | |
ATCCAAACAGGGACAAATGC+AGG | + | chr1.2:31088824-31088843 | None:intergenic | 45.0% | |
CAACCAGGCACTTCATATCA+AGG | + | chr1.2:31092229-31092248 | None:intergenic | 45.0% | |
CAGATTGTGGCTACTGTTAG+GGG | - | chr1.2:31092816-31092835 | MS.gene41329:intron | 45.0% | |
CAGTAGGGAATTCTTCTCGA+AGG | + | chr1.2:31090005-31090024 | None:intergenic | 45.0% | |
CGCAACAGTAGGAACAGTTT+CGG | + | chr1.2:31089563-31089582 | None:intergenic | 45.0% | |
CTGATCCAAATCACTGGCAA+AGG | + | chr1.2:31089721-31089740 | None:intergenic | 45.0% | |
CTTCAAGTACCTGGGCTAAT+TGG | + | chr1.2:31091518-31091537 | None:intergenic | 45.0% | |
GAAAAAAGGGTGAGGAAAGC+AGG | - | chr1.2:31089816-31089835 | MS.gene41329:intron | 45.0% | |
GAAACTATCTTGGCCTCTGA+AGG | + | chr1.2:31093056-31093075 | None:intergenic | 45.0% | |
GAAATGCTAACTAGTTCCCC+TGG | - | chr1.2:31090485-31090504 | MS.gene41329:intron | 45.0% | |
GAACTAGGTGGTGAGGTTAA+AGG | + | chr1.2:31092100-31092119 | None:intergenic | 45.0% | |
GAAGGGAAAAGGGGAGAAAA+AGG | + | chr1.2:31089896-31089915 | None:intergenic | 45.0% | |
GAGAGTCTACTCAGAGATGT+AGG | - | chr1.2:31089352-31089371 | MS.gene41329:CDS | 45.0% | |
GGAGATGACTTCAAGTACCT+GGG | + | chr1.2:31091526-31091545 | None:intergenic | 45.0% | |
GGATGGTCTGTTTGTATGGA+GGG | - | chr1.2:31093306-31093325 | MS.gene41329:intron | 45.0% | |
GGCCCTATCTGAACTATCTA+TGG | + | chr1.2:31089700-31089719 | None:intergenic | 45.0% | |
GGTTAAAGGCAGCTAAATCG+AGG | + | chr1.2:31092086-31092105 | None:intergenic | 45.0% | |
GTTAACACAACGAGTACCCA+AGG | + | chr1.2:31089793-31089812 | None:intergenic | 45.0% | |
GTTTCAGGCTCGTAAAAGGA+AGG | - | chr1.2:31089477-31089496 | MS.gene41329:intron | 45.0% | |
TATGGAGGGAAATGGAAGGT+GGG | - | chr1.2:31093320-31093339 | MS.gene41329:intron | 45.0% | |
TCAACCTCAACACCAGACAT+GGG | + | chr1.2:31093949-31093968 | None:intergenic | 45.0% | |
TCCCAATAGAGCCTGAAAGT+CGG | + | chr1.2:31092681-31092700 | None:intergenic | 45.0% | |
TGATGAACAAGTCAACACCG+AGG | - | chr1.2:31093921-31093940 | MS.gene41329:intron | 45.0% | |
TGCACTTGAAAGCGACAGTA+GGG | + | chr1.2:31090020-31090039 | None:intergenic | 45.0% | |
TGGATGGTCTGTTTGTATGG+AGG | - | chr1.2:31093305-31093324 | MS.gene41329:intron | 45.0% | |
TTAGCTGATCCAATTAGCCC+AGG | - | chr1.2:31091506-31091525 | MS.gene41329:intron | 45.0% | |
TTCCTGCATTTGTCCCTGTT+TGG | - | chr1.2:31088819-31088838 | MS.gene41329:intron | 45.0% | |
! | ACTTCTCAACTGACTCTCGA+GGG | + | chr1.2:31089972-31089991 | None:intergenic | 45.0% |
! | AGACCTTGATATGAAGTGCC+TGG | - | chr1.2:31092223-31092242 | MS.gene41329:intron | 45.0% |
! | CTTAGTGCTTTAGGCATGTG+GGG | + | chr1.2:31092359-31092378 | None:intergenic | 45.0% |
! | CTTTGCCAGTGATTTGGATC+AGG | - | chr1.2:31089719-31089738 | MS.gene41329:intron | 45.0% |
! | GGCCAATCATTTGGAATACC+AGG | + | chr1.2:31088430-31088449 | None:intergenic | 45.0% |
! | GTCTTAGTGCTTTAGGCATG+TGG | + | chr1.2:31092361-31092380 | None:intergenic | 45.0% |
! | TTCTCTGCTCGCCTCAATTT+TGG | + | chr1.2:31093766-31093785 | None:intergenic | 45.0% |
! | TTTCTCCCCTTTTCCCTTCT+GGG | - | chr1.2:31089897-31089916 | MS.gene41329:intron | 45.0% |
! | TTTTCTCCCCTTTTCCCTTC+TGG | - | chr1.2:31089896-31089915 | MS.gene41329:intron | 45.0% |
!! | GCTCTAGAACATGACCAGAA+AGG | + | chr1.2:31091816-31091835 | None:intergenic | 45.0% |
!!! | TAGATTTTTTTTTTTTTTAA+TGG | - | chr1.2:31088697-31088716 | MS.gene41329:intron | 5.0% |
!!! | TTTTTTTTTTTTTTTACTAT+GGG | - | chr1.2:31092396-31092415 | MS.gene41329:CDS | 5.0% |
!!! | TTTTTTTTTTTTTTTTACTA+TGG | - | chr1.2:31092395-31092414 | MS.gene41329:CDS | 5.0% |
AACACCAGACATGGGAACCT+CGG | + | chr1.2:31093941-31093960 | None:intergenic | 50.0% | |
AAGGACACGATGGATGCTGA+CGG | - | chr1.2:31093868-31093887 | MS.gene41329:intron | 50.0% | |
AAGGCAGCTAAATCGAGGCT+TGG | + | chr1.2:31092081-31092100 | None:intergenic | 50.0% | |
AGAGATATCAGCACCCTAGC+GGG | + | chr1.2:31092756-31092775 | None:intergenic | 50.0% | |
AGCTCATCTGATCCCATGGA+TGG | - | chr1.2:31093814-31093833 | MS.gene41329:CDS | 50.0% | |
AGTCCAGCATGACAACACCA+GGG | + | chr1.2:31091433-31091452 | None:intergenic | 50.0% | |
ATCCATGGGATCAGATGAGC+TGG | + | chr1.2:31093815-31093834 | None:intergenic | 50.0% | |
ATGCCTCCAGTTAGGGATCA+AGG | - | chr1.2:31093026-31093045 | MS.gene41329:intron | 50.0% | |
CCCAATAGAGCCTGAAAGTC+GGG | + | chr1.2:31092680-31092699 | None:intergenic | 50.0% | |
CCCGACTTTCAGGCTCTATT+GGG | - | chr1.2:31092677-31092696 | MS.gene41329:intron | 50.0% | |
CTCGAGAGTCAGTTGAGAAG+TGG | - | chr1.2:31089971-31089990 | MS.gene41329:intron | 50.0% | |
CTGCACTTGAAAGCGACAGT+AGG | + | chr1.2:31090021-31090040 | None:intergenic | 50.0% | |
GGATCAAGGAGAACCTTCAG+AGG | - | chr1.2:31093040-31093059 | MS.gene41329:intron | 50.0% | |
GGTTCTCCTTGATCCCTAAC+TGG | + | chr1.2:31093035-31093054 | None:intergenic | 50.0% | |
GTATGGAGGGAAATGGAAGG+TGG | - | chr1.2:31093319-31093338 | MS.gene41329:intron | 50.0% | |
GTTAGGGGCAAGCTCAAGAA+GGG | - | chr1.2:31092831-31092850 | MS.gene41329:intron | 50.0% | |
TACTAGAGGTCCTTGATGCC+CGG | - | chr1.2:31089763-31089782 | MS.gene41329:intron | 50.0% | |
TAGGGCCTTTGCCAGTGATT+TGG | - | chr1.2:31089713-31089732 | MS.gene41329:intron | 50.0% | |
TATGCTAACCGGTGCCTCAT+GGG | + | chr1.2:31090644-31090663 | None:intergenic | 50.0% | |
TCAGGCTCGTAAAAGGAAGG+CGG | - | chr1.2:31089480-31089499 | MS.gene41329:intron | 50.0% | |
TCCCGACTTTCAGGCTCTAT+TGG | - | chr1.2:31092676-31092695 | MS.gene41329:intron | 50.0% | |
TCGATGTCAGTGCTAGTGCT+GGG | - | chr1.2:31091351-31091370 | MS.gene41329:intron | 50.0% | |
TCTCCTTGATCCCTAACTGG+AGG | + | chr1.2:31093032-31093051 | None:intergenic | 50.0% | |
TGTTAGGGGCAAGCTCAAGA+AGG | - | chr1.2:31092830-31092849 | MS.gene41329:intron | 50.0% | |
TTATGCTAACCGGTGCCTCA+TGG | + | chr1.2:31090645-31090664 | None:intergenic | 50.0% | |
TTGGTTGGACTGCCCAATGT+TGG | - | chr1.2:31091287-31091306 | MS.gene41329:intron | 50.0% | |
! | CACTTCTCAACTGACTCTCG+AGG | + | chr1.2:31089973-31089992 | None:intergenic | 50.0% |
! | GTTAAGTTGCTGGATTGCCC+TGG | - | chr1.2:31091413-31091432 | MS.gene41329:intron | 50.0% |
!! | TAGCACTGACATCGACAGCA+TGG | + | chr1.2:31091346-31091365 | None:intergenic | 50.0% |
AACACCGAGGTTCCCATGTC+TGG | - | chr1.2:31093934-31093953 | MS.gene41329:intron | 55.0% | |
AACGAGTACCCAAGGGATCC+CGG | + | chr1.2:31089785-31089804 | None:intergenic | 55.0% | |
ACTAGAGGTCCTTGATGCCC+GGG | - | chr1.2:31089764-31089783 | MS.gene41329:intron | 55.0% | |
AGCCAGCTCATCTGATCCCA+TGG | - | chr1.2:31093810-31093829 | MS.gene41329:CDS | 55.0% | |
AGGACACGATGGATGCTGAC+GGG | - | chr1.2:31093869-31093888 | MS.gene41329:intron | 55.0% | |
AGGCTCGTAAAAGGAAGGCG+GGG | - | chr1.2:31089482-31089501 | MS.gene41329:intron | 55.0% | |
ATGGATGCTGACGGGAGTGA+CGG | - | chr1.2:31093877-31093896 | MS.gene41329:intron | 55.0% | |
CAGGCTCGTAAAAGGAAGGC+GGG | - | chr1.2:31089481-31089500 | MS.gene41329:intron | 55.0% | |
GAGTCCAGCATGACAACACC+AGG | + | chr1.2:31091434-31091453 | None:intergenic | 55.0% | |
GTCGATGTCAGTGCTAGTGC+TGG | - | chr1.2:31091350-31091369 | MS.gene41329:intron | 55.0% | |
TCTCAAGCTCTGTCCCGCTA+GGG | - | chr1.2:31092740-31092759 | MS.gene41329:intron | 55.0% | |
TTCTCAAGCTCTGTCCCGCT+AGG | - | chr1.2:31092739-31092758 | MS.gene41329:intron | 55.0% | |
! | GACGGTGGTGACGACAATGA+TGG | - | chr1.2:31093895-31093914 | MS.gene41329:intron | 55.0% |
! | GGTTCCCATGTCTGGTGTTG+AGG | - | chr1.2:31093942-31093961 | MS.gene41329:intron | 55.0% |
!! | TTGCCCTGGTGTTGTCATGC+TGG | - | chr1.2:31091427-31091446 | MS.gene41329:intron | 55.0% |
AACTAGTTCCCCTGGGGCAC+TGG | - | chr1.2:31090493-31090512 | MS.gene41329:intron | 60.0% | |
ACGAGTACCCAAGGGATCCC+GGG | + | chr1.2:31089784-31089803 | None:intergenic | 60.0% | |
ACTCCTTAACCCAGTGCCCC+AGG | + | chr1.2:31090506-31090525 | None:intergenic | 60.0% | |
AGGGGCAAGCTCAAGAAGGG+TGG | - | chr1.2:31092834-31092853 | MS.gene41329:intron | 60.0% | |
CTCCTTAACCCAGTGCCCCA+GGG | + | chr1.2:31090505-31090524 | None:intergenic | 60.0% | |
CTCCTTAACCGGTGCCCATG+AGG | - | chr1.2:31090627-31090646 | MS.gene41329:intron | 60.0% | |
CTTGATGCCCGGGATCCCTT+GGG | - | chr1.2:31089774-31089793 | MS.gene41329:intron | 60.0% | |
TCCTTAACCCAGTGCCCCAG+GGG | + | chr1.2:31090504-31090523 | None:intergenic | 60.0% | |
! | ACTAGTTCCCCTGGGGCACT+GGG | - | chr1.2:31090494-31090513 | MS.gene41329:intron | 60.0% |
! | GTGCTAGTGCTGGGTCGACA+AGG | - | chr1.2:31091360-31091379 | MS.gene41329:intron | 60.0% |
!! | TGCCTCATGGGCACCGGTTA+AGG | + | chr1.2:31090632-31090651 | None:intergenic | 60.0% |
AACCGGTGCCCATGAGGCAC+CGG | - | chr1.2:31090633-31090652 | MS.gene41329:CDS | 65.0% | |
AACCGGTGCCTCATGGGCAC+CGG | + | chr1.2:31090638-31090657 | None:intergenic | 65.0% | |
AAGGAAGGCGGGGTTGCCAG+TGG | - | chr1.2:31089492-31089511 | MS.gene41329:intron | 65.0% | |
CCAAGGGATCCCGGGCATCA+AGG | + | chr1.2:31089776-31089795 | None:intergenic | 65.0% | |
CCTTGATGCCCGGGATCCCT+TGG | - | chr1.2:31089773-31089792 | MS.gene41329:intron | 65.0% | |
GATGCTGACGGGAGTGACGG+TGG | - | chr1.2:31093880-31093899 | MS.gene41329:intron | 65.0% | |
!! | TCCCCTGGGGCACTGGGTTA+AGG | - | chr1.2:31090500-31090519 | MS.gene41329:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 31088183 | 31093975 | 31088183 | ID=MS.gene41329 |
chr1.2 | mRNA | 31088183 | 31093975 | 31088183 | ID=MS.gene41329.t1;Parent=MS.gene41329 |
chr1.2 | exon | 31093957 | 31093975 | 31093957 | ID=MS.gene41329.t1.exon1;Parent=MS.gene41329.t1 |
chr1.2 | CDS | 31093957 | 31093975 | 31093957 | ID=cds.MS.gene41329.t1;Parent=MS.gene41329.t1 |
chr1.2 | exon | 31093618 | 31093862 | 31093618 | ID=MS.gene41329.t1.exon2;Parent=MS.gene41329.t1 |
chr1.2 | CDS | 31093618 | 31093862 | 31093618 | ID=cds.MS.gene41329.t1;Parent=MS.gene41329.t1 |
chr1.2 | exon | 31092563 | 31092674 | 31092563 | ID=MS.gene41329.t1.exon3;Parent=MS.gene41329.t1 |
chr1.2 | CDS | 31092563 | 31092674 | 31092563 | ID=cds.MS.gene41329.t1;Parent=MS.gene41329.t1 |
chr1.2 | exon | 31092282 | 31092455 | 31092282 | ID=MS.gene41329.t1.exon4;Parent=MS.gene41329.t1 |
chr1.2 | CDS | 31092282 | 31092455 | 31092282 | ID=cds.MS.gene41329.t1;Parent=MS.gene41329.t1 |
chr1.2 | exon | 31091988 | 31092196 | 31091988 | ID=MS.gene41329.t1.exon5;Parent=MS.gene41329.t1 |
chr1.2 | CDS | 31091988 | 31092196 | 31091988 | ID=cds.MS.gene41329.t1;Parent=MS.gene41329.t1 |
chr1.2 | exon | 31090631 | 31090895 | 31090631 | ID=MS.gene41329.t1.exon6;Parent=MS.gene41329.t1 |
chr1.2 | CDS | 31090631 | 31090895 | 31090631 | ID=cds.MS.gene41329.t1;Parent=MS.gene41329.t1 |
chr1.2 | exon | 31089249 | 31089428 | 31089249 | ID=MS.gene41329.t1.exon7;Parent=MS.gene41329.t1 |
chr1.2 | CDS | 31089249 | 31089428 | 31089249 | ID=cds.MS.gene41329.t1;Parent=MS.gene41329.t1 |
chr1.2 | exon | 31088941 | 31089152 | 31088941 | ID=MS.gene41329.t1.exon8;Parent=MS.gene41329.t1 |
chr1.2 | CDS | 31088941 | 31089152 | 31088941 | ID=cds.MS.gene41329.t1;Parent=MS.gene41329.t1 |
chr1.2 | exon | 31088183 | 31088566 | 31088183 | ID=MS.gene41329.t1.exon9;Parent=MS.gene41329.t1 |
chr1.2 | CDS | 31088183 | 31088566 | 31088183 | ID=cds.MS.gene41329.t1;Parent=MS.gene41329.t1 |
Gene Sequence |
Protein sequence |