Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072945.t1 | XP_013461902.1 | 90.6 | 256 | 16 | 2 | 1 | 252 | 1 | 252 | 5.40E-116 | 427.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072945.t1 | Q6GQI5 | 28.0 | 239 | 168 | 2 | 17 | 252 | 354 | 591 | 2.1e-20 | 100.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072945.t1 | A0A072V286 | 90.6 | 256 | 16 | 2 | 1 | 252 | 1 | 252 | 3.9e-116 | 427.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene072945 | 0.818504 | 1.89E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene072945 | 0.807172 | 5.76E-50 | -1.69E-46 |
| MS.gene049647 | MS.gene072945 | 0.820761 | 5.78E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene072945 | 0.814266 | 1.68E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene072945 | 0.829769 | 4.28E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene072945 | 0.835898 | 1.28E-56 | -1.69E-46 |
| MS.gene050442 | MS.gene072945 | 0.825239 | 5.22E-54 | -1.69E-46 |
| MS.gene050719 | MS.gene072945 | 0.843625 | 1.25E-58 | -1.69E-46 |
| MS.gene050721 | MS.gene072945 | 0.840081 | 1.08E-57 | -1.69E-46 |
| MS.gene050724 | MS.gene072945 | 0.817747 | 2.81E-52 | -1.69E-46 |
| MS.gene050780 | MS.gene072945 | 0.826717 | 2.33E-54 | -1.69E-46 |
| MS.gene050824 | MS.gene072945 | 0.800453 | 1.43E-48 | -1.69E-46 |
| MS.gene050844 | MS.gene072945 | 0.808614 | 2.84E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene072945 | 0.820593 | 6.32E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene072945 | 0.817866 | 2.64E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene072945 | 0.80169 | 7.99E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene072945 | 0.81207 | 5.10E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene072945 | 0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene052488 | MS.gene072945 | 0.815798 | 7.69E-52 | -1.69E-46 |
| MS.gene052586 | MS.gene072945 | 0.803601 | 3.23E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene072945 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene053054 | MS.gene072945 | -0.802551 | 5.32E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene072945 | 0.813453 | 2.54E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene072945 | 0.84728 | 1.28E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene072945 | 0.803789 | 2.95E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene072945 | 0.825038 | 5.83E-54 | -1.69E-46 |
| MS.gene054291 | MS.gene072945 | -0.801354 | 9.37E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene072945 | 0.817343 | 3.46E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene072945 | 0.839292 | 1.73E-57 | -1.69E-46 |
| MS.gene054576 | MS.gene072945 | 0.842965 | 1.87E-58 | -1.69E-46 |
| MS.gene055357 | MS.gene072945 | 0.803318 | 3.69E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene072945 | 0.80194 | 7.10E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene072945 | 0.810707 | 1.01E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene072945 | 0.83069 | 2.55E-55 | -1.69E-46 |
| MS.gene057021 | MS.gene072945 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene072945 | 0.849653 | 2.82E-60 | -1.69E-46 |
| MS.gene057060 | MS.gene072945 | 0.801484 | 8.81E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene072945 | 0.804443 | 2.15E-49 | -1.69E-46 |
| MS.gene05795 | MS.gene072945 | 0.801723 | 7.87E-49 | -1.69E-46 |
| MS.gene057980 | MS.gene072945 | 0.80319 | 3.92E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene072945 | 0.827325 | 1.67E-54 | -1.69E-46 |
| MS.gene058829 | MS.gene072945 | 0.809787 | 1.59E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene072945 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene072945 | 0.802134 | 6.48E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene072945 | 0.808374 | 3.20E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene072945 | 0.842882 | 1.97E-58 | -1.69E-46 |
| MS.gene061040 | MS.gene072945 | -0.813456 | 2.54E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072945.t1 | MTR_3g108530 | 90.625 | 256 | 16 | 2 | 1 | 252 | 1 | 252 | 1.08e-163 | 454 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072945.t1 | AT4G32560 | 48.333 | 240 | 122 | 1 | 15 | 252 | 22 | 261 | 1.98e-69 | 215 |
| MS.gene072945.t1 | AT4G32560 | 48.333 | 240 | 122 | 1 | 15 | 252 | 45 | 284 | 3.22e-69 | 215 |
| MS.gene072945.t1 | AT4G32560 | 48.333 | 240 | 122 | 1 | 15 | 252 | 47 | 286 | 3.85e-69 | 215 |
| MS.gene072945.t1 | AT4G32560 | 48.333 | 240 | 122 | 1 | 15 | 252 | 47 | 286 | 3.85e-69 | 215 |
Find 42 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTACCTACAATGCTCTTT+TGG | 0.238498 | 3.1:+85457489 | MS.gene072945:CDS |
| AAGAGTTGATTTGATGAAAA+AGG | 0.251538 | 3.1:+85456455 | MS.gene072945:CDS |
| AACTTCGATGAGTGGCAATT+TGG | 0.253638 | 3.1:+85456066 | None:intergenic |
| AATAAAAGAATTGATGTTAA+AGG | 0.310913 | 3.1:+85457513 | MS.gene072945:CDS |
| TATTTCCAAAAGAGCATTGT+AGG | 0.361022 | 3.1:-85457494 | None:intergenic |
| GACAAATCTTAATGATCTTA+AGG | 0.372253 | 3.1:+85461176 | MS.gene072945:CDS |
| ATTAAGAGAGAGAATCAATA+AGG | 0.380556 | 3.1:+85456147 | MS.gene072945:CDS |
| CTTACTGGACGATTTCTGAT+TGG | 0.391416 | 3.1:-85456646 | None:intergenic |
| GCTCCACAACATTCATCTTC+CGG | 0.435244 | 3.1:-85456114 | None:intergenic |
| TCCCTTGACAATTCCTTCCA+TGG | 0.449854 | 3.1:-85459112 | None:intergenic |
| AATTGTCAAGGGAAGTGAAC+AGG | 0.458713 | 3.1:+85459122 | MS.gene072945:CDS |
| AGGAACTTGCTGCTAGACTA+AGG | 0.460208 | 3.1:+85456582 | MS.gene072945:intron |
| TATAAAGCTTGTTCATTCCA+TGG | 0.467664 | 3.1:+85459095 | MS.gene072945:CDS |
| GAGTGGCAATTTGGATGAAC+TGG | 0.470793 | 3.1:+85456075 | MS.gene072945:CDS |
| CAATTCAATCAAGTCTTTGA+AGG | 0.479320 | 3.1:+85456201 | MS.gene072945:CDS |
| ATTGAATTCGATCATTTCAC+AGG | 0.492974 | 3.1:+85457546 | MS.gene072945:CDS |
| TGGTTTGTGAGATTGATTGC+CGG | 0.503885 | 3.1:+85456095 | MS.gene072945:CDS |
| AGAGAGAGAATCAATAAGGA+AGG | 0.516554 | 3.1:+85456151 | MS.gene072945:CDS |
| TACCTTATTGCAGTTTCAAG+AGG | 0.525372 | 3.1:+85459050 | MS.gene072945:intron |
| AGTTCAGGATCTTGAAAGGA+AGG | 0.526031 | 3.1:+85456296 | MS.gene072945:intron |
| CATTCTCTTAGCGAATCACT+TGG | 0.532694 | 3.1:+85456432 | MS.gene072945:CDS |
| AAGCTTGTTCATTCCATGGA+AGG | 0.540003 | 3.1:+85459099 | MS.gene072945:CDS |
| AAACTACGAAAGGTTCAACT+AGG | 0.544419 | 3.1:+85461138 | MS.gene072945:CDS |
| CGATTTCTGATTGGCACGGT+AGG | 0.549963 | 3.1:-85456637 | None:intergenic |
| TTCCATGGAAGGAATTGTCA+AGG | 0.564214 | 3.1:+85459110 | MS.gene072945:CDS |
| TCTTAGTTCAGGATCTTGAA+AGG | 0.575221 | 3.1:+85456292 | MS.gene072945:intron |
| AGAACTGTATGCTCAAATCC+AGG | 0.575284 | 3.1:+85457282 | MS.gene072945:CDS |
| ACGACCATCAGTGCTACTAA+AGG | 0.575612 | 3.1:-85459073 | None:intergenic |
| GAGCATACAGTTCTGAGAGC+CGG | 0.578341 | 3.1:-85457273 | None:intergenic |
| GAGGCCTTTAGTAGCACTGA+TGG | 0.586647 | 3.1:+85459069 | MS.gene072945:CDS |
| GATAGATATGCCGCAGCAGT+CGG | 0.593565 | 3.1:+85461198 | MS.gene072945:CDS |
| CTTAACACAACTTCGATGAG+TGG | 0.606083 | 3.1:+85456058 | None:intergenic |
| CTGAGATTAATGAATTAGAG+AGG | 0.628262 | 3.1:+85456367 | MS.gene072945:CDS |
| AACTACGAAAGGTTCAACTA+GGG | 0.640484 | 3.1:+85461139 | MS.gene072945:CDS |
| TCCATGGAAGGAATTGTCAA+GGG | 0.644066 | 3.1:+85459111 | MS.gene072945:CDS |
| TTGCCGGAAGATGAATGTTG+TGG | 0.644134 | 3.1:+85456111 | MS.gene072945:CDS |
| GGAACTTGCTGCTAGACTAA+GGG | 0.645439 | 3.1:+85456583 | MS.gene072945:intron |
| CTTATGCTCACCGACTGCTG+CGG | 0.652781 | 3.1:-85461208 | None:intergenic |
| TGGACGATTTCTGATTGGCA+CGG | 0.669366 | 3.1:-85456641 | None:intergenic |
| GCTTGTGCAGGTATGAACAC+CGG | 0.672424 | 3.1:+85457254 | MS.gene072945:intron |
| ATATGTACAGAAACTACGAA+AGG | 0.693870 | 3.1:+85461128 | MS.gene072945:intron |
| AGGAAAATAGCAAATGACTG+TGG | 0.704917 | 3.1:+85456387 | MS.gene072945:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAGAATTGATGTTAA+AGG | + | chr3.1:85457513-85457532 | MS.gene072945:CDS | 15.0% |
| !! | AATGATCAATAAAATAAAAG+AGG | - | chr3.1:85460698-85460717 | None:intergenic | 15.0% |
| !! | ATTATAAGATTAAAGCTAAA+TGG | + | chr3.1:85460125-85460144 | MS.gene072945:intron | 15.0% |
| !! | TACATAATTTATAGATATCA+AGG | - | chr3.1:85459782-85459801 | None:intergenic | 15.0% |
| !! | TTATAAGATTAAAGCTAAAT+GGG | + | chr3.1:85460126-85460145 | MS.gene072945:intron | 15.0% |
| !!! | AAAGATTGCATTTTTTAAAA+GGG | - | chr3.1:85457819-85457838 | None:intergenic | 15.0% |
| !!! | ATAAAAGTAATTGATAATAC+GGG | - | chr3.1:85456739-85456758 | None:intergenic | 15.0% |
| !!! | GATAAAAGTAATTGATAATA+CGG | - | chr3.1:85456740-85456759 | None:intergenic | 15.0% |
| !!! | TGAAGATTTTTTTTTTTTTG+TGG | - | chr3.1:85458267-85458286 | None:intergenic | 15.0% |
| !!! | TGGAATATATTGTTATTTAT+TGG | + | chr3.1:85457216-85457235 | MS.gene072945:intron | 15.0% |
| !!! | TTTTATTGCATCTTTTAATT+TGG | + | chr3.1:85458860-85458879 | MS.gene072945:intron | 15.0% |
| !! | AAAACTCAAATGGTAATATA+AGG | - | chr3.1:85461028-85461047 | None:intergenic | 20.0% |
| !! | AAAATAAATAGAATGGCAAA+AGG | - | chr3.1:85457725-85457744 | None:intergenic | 20.0% |
| !! | AAATAAGATGATGAAATGTT+AGG | - | chr3.1:85458968-85458987 | None:intergenic | 20.0% |
| !! | ACAACTATTAATCATGAAAT+GGG | - | chr3.1:85459737-85459756 | None:intergenic | 20.0% |
| !! | ATCATGAAAAATTGAACTAT+TGG | + | chr3.1:85457886-85457905 | MS.gene072945:intron | 20.0% |
| !! | ATTATAAGATTCAAGCAAAA+TGG | + | chr3.1:85459510-85459529 | MS.gene072945:intron | 20.0% |
| !! | GAAAAATAACAAAACTCAAA+TGG | - | chr3.1:85461038-85461057 | None:intergenic | 20.0% |
| !! | GTATAAAGAAAAAAACTTAC+TGG | - | chr3.1:85456664-85456683 | None:intergenic | 20.0% |
| !! | GTCAATATAATTAAATGCAA+GGG | - | chr3.1:85459439-85459458 | None:intergenic | 20.0% |
| !! | TACACCTTAATCTATATTAA+TGG | - | chr3.1:85458650-85458669 | None:intergenic | 20.0% |
| !! | TCATTTAGAAAGATTTGATT+CGG | + | chr3.1:85459836-85459855 | MS.gene072945:intron | 20.0% |
| !! | TTATAAGATTCAAGCAAAAT+GGG | + | chr3.1:85459511-85459530 | MS.gene072945:intron | 20.0% |
| !! | TTATCCAAATAATAATCAGA+AGG | - | chr3.1:85460913-85460932 | None:intergenic | 20.0% |
| !!! | AAATATGTGAAAGGATTTTA+TGG | + | chr3.1:85460556-85460575 | MS.gene072945:intron | 20.0% |
| !!! | AAGAATTTGAGATCTAATAA+AGG | + | chr3.1:85458686-85458705 | MS.gene072945:intron | 20.0% |
| !!! | AGATTTTTTTTTTTTTGTGG+TGG | - | chr3.1:85458264-85458283 | None:intergenic | 20.0% |
| !!! | ATATTTTTACTGTACAATGT+TGG | + | chr3.1:85460207-85460226 | MS.gene072945:intron | 20.0% |
| !!! | CAAAGATTGCATTTTTTAAA+AGG | - | chr3.1:85457820-85457839 | None:intergenic | 20.0% |
| !!! | GTAGAATAGTTTTAGTTTTT+TGG | + | chr3.1:85461301-85461320 | MS.gene072945:intron | 20.0% |
| !!! | TAATTATTTTAGAATGTCCT+TGG | + | chr3.1:85457420-85457439 | MS.gene072945:intron | 20.0% |
| !!! | TATTTTTACTGTACAATGTT+GGG | + | chr3.1:85460208-85460227 | MS.gene072945:intron | 20.0% |
| !!! | TTTAAGTTCAAGAAACATTA+TGG | - | chr3.1:85458912-85458931 | None:intergenic | 20.0% |
| !!! | TTTCATGATAGTTTAGTTTA+TGG | - | chr3.1:85457875-85457894 | None:intergenic | 20.0% |
| !!! | TTTTGCTTGAATCTTATAAT+TGG | - | chr3.1:85459510-85459529 | None:intergenic | 20.0% |
| ! | AAAAAGGTAACAATTAGCAT+TGG | + | chr3.1:85456471-85456490 | MS.gene072945:intron | 25.0% |
| ! | AAAAGGTAACAATTAGCATT+GGG | + | chr3.1:85456472-85456491 | MS.gene072945:intron | 25.0% |
| ! | AAAATTGAACTATTGGATGA+AGG | + | chr3.1:85457893-85457912 | MS.gene072945:intron | 25.0% |
| ! | AAATATTCTAGACACTTGTA+GGG | - | chr3.1:85456766-85456785 | None:intergenic | 25.0% |
| ! | AACTATTAATCATGAAATGG+GGG | - | chr3.1:85459735-85459754 | None:intergenic | 25.0% |
| ! | AAGGCCATTAATATAGATTA+AGG | + | chr3.1:85458643-85458662 | MS.gene072945:intron | 25.0% |
| ! | AATAATTAAACTTCAGCACA+TGG | - | chr3.1:85458543-85458562 | None:intergenic | 25.0% |
| ! | AATATAAAACCCTTCTCATT+TGG | + | chr3.1:85458067-85458086 | MS.gene072945:intron | 25.0% |
| ! | ACTTTGGACTAAAATTTGAT+TGG | + | chr3.1:85459215-85459234 | MS.gene072945:intron | 25.0% |
| ! | AGATCTAAAGATTAATGAGT+TGG | + | chr3.1:85457029-85457048 | MS.gene072945:intron | 25.0% |
| ! | AGTTTATGGTAAATGTAAGA+AGG | - | chr3.1:85457861-85457880 | None:intergenic | 25.0% |
| ! | ATATAAAACCCTTCTCATTT+GGG | + | chr3.1:85458068-85458087 | MS.gene072945:intron | 25.0% |
| ! | ATATATGTACAGAAACTAGA+AGG | + | chr3.1:85459631-85459650 | MS.gene072945:intron | 25.0% |
| ! | ATCAAAAGAATTTATGAACC+TGG | - | chr3.1:85457303-85457322 | None:intergenic | 25.0% |
| ! | ATGAAGATAATAGAGCAAAA+AGG | - | chr3.1:85460763-85460782 | None:intergenic | 25.0% |
| ! | ATTAAGAGAGAGAATCAATA+AGG | + | chr3.1:85456147-85456166 | MS.gene072945:CDS | 25.0% |
| ! | CAACTATTAATCATGAAATG+GGG | - | chr3.1:85459736-85459755 | None:intergenic | 25.0% |
| ! | CACAACTATTAATCATGAAA+TGG | - | chr3.1:85459738-85459757 | None:intergenic | 25.0% |
| ! | CAGAAGGAAAATAAATAGAA+TGG | - | chr3.1:85457732-85457751 | None:intergenic | 25.0% |
| ! | CATTTAGAAAGATTTGATTC+GGG | + | chr3.1:85459837-85459856 | MS.gene072945:intron | 25.0% |
| ! | CTTTGAACTAAATATGTGAA+AGG | + | chr3.1:85460547-85460566 | MS.gene072945:intron | 25.0% |
| ! | GAACTAAAAAATTGTATTGG+AGG | + | chr3.1:85458092-85458111 | MS.gene072945:intron | 25.0% |
| ! | GACAAATCTTAATGATCTTA+AGG | + | chr3.1:85461176-85461195 | MS.gene072945:CDS | 25.0% |
| ! | GATTAAACCTATGAAAAAGT+TGG | - | chr3.1:85459695-85459714 | None:intergenic | 25.0% |
| ! | GGTCAATATAATTAAATGCA+AGG | - | chr3.1:85459440-85459459 | None:intergenic | 25.0% |
| ! | GTTTGTAGTAATTGAAACAA+TGG | - | chr3.1:85456540-85456559 | None:intergenic | 25.0% |
| ! | TAAAAAATTGTATTGGAGGA+GGG | + | chr3.1:85458096-85458115 | MS.gene072945:intron | 25.0% |
| ! | TCATTCAAGAAAGAGTTATA+CGG | - | chr3.1:85456688-85456707 | None:intergenic | 25.0% |
| ! | TGAAAAATCAAATGTGTGAA+TGG | - | chr3.1:85459257-85459276 | None:intergenic | 25.0% |
| ! | TGAAGATAATAGAGCAAAAA+GGG | - | chr3.1:85460762-85460781 | None:intergenic | 25.0% |
| ! | TGGTATATGATAGAACATTA+TGG | + | chr3.1:85457061-85457080 | MS.gene072945:intron | 25.0% |
| ! | TGTAAAAACATTAGTATGGA+TGG | + | chr3.1:85460435-85460454 | MS.gene072945:intron | 25.0% |
| ! | TGTATCATAGCAAAATCATA+AGG | - | chr3.1:85457620-85457639 | None:intergenic | 25.0% |
| ! | TTCATAGGTTTAATCTTCAT+GGG | + | chr3.1:85459700-85459719 | MS.gene072945:intron | 25.0% |
| ! | TTCTCCTTCTGATTATTATT+TGG | + | chr3.1:85460906-85460925 | MS.gene072945:intron | 25.0% |
| ! | TTTCAATGAATGTGCTTTAT+GGG | + | chr3.1:85461082-85461101 | MS.gene072945:intron | 25.0% |
| ! | TTTCATAGGTTTAATCTTCA+TGG | + | chr3.1:85459699-85459718 | MS.gene072945:intron | 25.0% |
| !! | AAAAGTGAAAAAGTTTTGCT+AGG | + | chr3.1:85457345-85457364 | MS.gene072945:intron | 25.0% |
| !! | AAAGTGAAAAAGTTTTGCTA+GGG | + | chr3.1:85457346-85457365 | MS.gene072945:intron | 25.0% |
| !! | AATGTTAGGTCAAACAATTT+TGG | - | chr3.1:85458954-85458973 | None:intergenic | 25.0% |
| !! | ATTATTTAGAACAATGACAG+TGG | + | chr3.1:85458557-85458576 | MS.gene072945:intron | 25.0% |
| !! | TAATGTCTTATTGTCAATAC+TGG | - | chr3.1:85460032-85460051 | None:intergenic | 25.0% |
| !! | TATTTTGCAGTAACTTAACA+TGG | + | chr3.1:85458494-85458513 | MS.gene072945:intron | 25.0% |
| !! | TCACATATTTAGTTCAAAGA+TGG | - | chr3.1:85460546-85460565 | None:intergenic | 25.0% |
| !! | TTGAACTTAAAAAAGCATAG+TGG | + | chr3.1:85458921-85458940 | MS.gene072945:intron | 25.0% |
| !! | TTTTTGCATGCGTAAATATT+TGG | + | chr3.1:85459153-85459172 | MS.gene072945:intron | 25.0% |
| !!! | AAGAGTTGATTTGATGAAAA+AGG | + | chr3.1:85456455-85456474 | MS.gene072945:CDS | 25.0% |
| !!! | AGTATTGACAATAAGACATT+AGG | + | chr3.1:85460031-85460050 | MS.gene072945:intron | 25.0% |
| !!! | ATCTCAAAAATTTGAGTTGT+TGG | + | chr3.1:85458819-85458838 | MS.gene072945:intron | 25.0% |
| !!! | ATGGTAATATAAGGTTTTGT+TGG | - | chr3.1:85461019-85461038 | None:intergenic | 25.0% |
| !!! | GATTTGGATAAAGTCTTATT+TGG | - | chr3.1:85460502-85460521 | None:intergenic | 25.0% |
| !!! | TCTCAAAAATTTGAGTTGTT+GGG | + | chr3.1:85458820-85458839 | MS.gene072945:intron | 25.0% |
| !!! | TTGAATATAATGTGTTGCTT+AGG | + | chr3.1:85456261-85456280 | MS.gene072945:intron | 25.0% |
| AAAAAAATCACGTGTGTGAA+TGG | - | chr3.1:85459877-85459896 | None:intergenic | 30.0% | |
| AAAGGCTTGGAAAAAAAGAA+AGG | + | chr3.1:85457983-85458002 | MS.gene072945:intron | 30.0% | |
| AATAGAGCAAAAAGGGTTTA+AGG | - | chr3.1:85460755-85460774 | None:intergenic | 30.0% | |
| ACAACATTAGAGATAGAGTT+GGG | + | chr3.1:85456841-85456860 | MS.gene072945:intron | 30.0% | |
| ACAATATATTCCAGACAACT+AGG | - | chr3.1:85457209-85457228 | None:intergenic | 30.0% | |
| AGACAGATGACATATGAAAT+GGG | - | chr3.1:85460666-85460685 | None:intergenic | 30.0% | |
| ATAATTAAATGCAAGGGTCA+AGG | - | chr3.1:85459433-85459452 | None:intergenic | 30.0% | |
| ATATGTACAGAAACTACGAA+AGG | + | chr3.1:85461128-85461147 | MS.gene072945:intron | 30.0% | |
| ATCATTTCACAGGTATTCAT+CGG | + | chr3.1:85457556-85457575 | MS.gene072945:intron | 30.0% | |
| ATCTATTCAACTACTCTTTC+TGG | + | chr3.1:85457394-85457413 | MS.gene072945:intron | 30.0% | |
| ATTGAATTCGATCATTTCAC+AGG | + | chr3.1:85457546-85457565 | MS.gene072945:CDS | 30.0% | |
| CAAATATTCTAGACACTTGT+AGG | - | chr3.1:85456767-85456786 | None:intergenic | 30.0% | |
| CAATTCAATCAAGTCTTTGA+AGG | + | chr3.1:85456201-85456220 | MS.gene072945:CDS | 30.0% | |
| CCAAATCATTAAGACATAAG+TGG | + | chr3.1:85460515-85460534 | MS.gene072945:intron | 30.0% | |
| CCACTTATGTCTTAATGATT+TGG | - | chr3.1:85460518-85460537 | None:intergenic | 30.0% | |
| CCATTTCTCAAAAGAAATGA+AGG | + | chr3.1:85458624-85458643 | MS.gene072945:intron | 30.0% | |
| CTAAAAAATTGTATTGGAGG+AGG | + | chr3.1:85458095-85458114 | MS.gene072945:intron | 30.0% | |
| CTGAGATTAATGAATTAGAG+AGG | + | chr3.1:85456367-85456386 | MS.gene072945:CDS | 30.0% | |
| CTTTCAATGAATGTGCTTTA+TGG | + | chr3.1:85461081-85461100 | MS.gene072945:intron | 30.0% | |
| GAAAAAAAGAAAGGAGTAAG+TGG | + | chr3.1:85457992-85458011 | MS.gene072945:intron | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr3.1:85458219-85458238 | MS.gene072945:intron | 30.0% | |
| GATGAAGATGACAAACAAAA+GGG | - | chr3.1:85459312-85459331 | None:intergenic | 30.0% | |
| GCATTTAAGAATCCTAATCA+GGG | + | chr3.1:85460845-85460864 | MS.gene072945:intron | 30.0% | |
| GGCTTGTAAAAACATTAGTA+TGG | + | chr3.1:85460431-85460450 | MS.gene072945:intron | 30.0% | |
| GGGGAACTAAAAAATTGTAT+TGG | + | chr3.1:85458089-85458108 | MS.gene072945:intron | 30.0% | |
| GTAATTAAAGAGATGGTACA+TGG | + | chr3.1:85457134-85457153 | MS.gene072945:intron | 30.0% | |
| GTTGGTTGTAATTAAAGAGA+TGG | + | chr3.1:85457127-85457146 | MS.gene072945:intron | 30.0% | |
| TAATTAAATGCAAGGGTCAA+GGG | - | chr3.1:85459432-85459451 | None:intergenic | 30.0% | |
| TACACCCAAAACTATAGTAA+TGG | + | chr3.1:85458714-85458733 | MS.gene072945:intron | 30.0% | |
| TACTTCTCAAAAGATATGGA+GGG | - | chr3.1:85458742-85458761 | None:intergenic | 30.0% | |
| TATAAAACCCTTCTCATTTG+GGG | + | chr3.1:85458069-85458088 | MS.gene072945:intron | 30.0% | |
| TCATAGGTTTAATCTTCATG+GGG | + | chr3.1:85459701-85459720 | MS.gene072945:intron | 30.0% | |
| TCGTAGTTTCTGTACATATA+TGG | - | chr3.1:85461127-85461146 | None:intergenic | 30.0% | |
| TCTCTACTTCTCAAAAGATA+TGG | - | chr3.1:85458746-85458765 | None:intergenic | 30.0% | |
| TGGTAAGACTATATGAGATA+AGG | + | chr3.1:85456809-85456828 | MS.gene072945:intron | 30.0% | |
| TTGAAACAATGGAATAAGCA+AGG | - | chr3.1:85456529-85456548 | None:intergenic | 30.0% | |
| TTGTCAATACTGGAATTTCA+TGG | - | chr3.1:85459391-85459410 | None:intergenic | 30.0% | |
| ! | AAGTGAAAAAGTTTTGCTAG+GGG | + | chr3.1:85457347-85457366 | MS.gene072945:intron | 30.0% |
| ! | GCTAAAACTTGTTCAGAAAA+AGG | - | chr3.1:85459011-85459030 | None:intergenic | 30.0% |
| ! | GGTTCCATTACTATAGTTTT+GGG | - | chr3.1:85458721-85458740 | None:intergenic | 30.0% |
| ! | TAATGAGTTGGATCGAAATA+TGG | + | chr3.1:85457041-85457060 | MS.gene072945:intron | 30.0% |
| ! | TAATGTCTTGTTGTCAATAC+TGG | - | chr3.1:85459401-85459420 | None:intergenic | 30.0% |
| ! | TATAAAGCTTGTTCATTCCA+TGG | + | chr3.1:85459095-85459114 | MS.gene072945:CDS | 30.0% |
| ! | TTTTTCATTTATGCTTGTGC+AGG | + | chr3.1:85457242-85457261 | MS.gene072945:intron | 30.0% |
| !! | AGACATTGACTTCTTTAGTA+AGG | + | chr3.1:85456927-85456946 | MS.gene072945:intron | 30.0% |
| !! | ATATCTTTTGAGAAGTAGAG+AGG | + | chr3.1:85458745-85458764 | MS.gene072945:intron | 30.0% |
| !! | ATTTCTTTTGAGAAATGGAG+AGG | - | chr3.1:85458622-85458641 | None:intergenic | 30.0% |
| !! | CCTTCATTTCTTTTGAGAAA+TGG | - | chr3.1:85458627-85458646 | None:intergenic | 30.0% |
| !! | TATTTCCAAAAGAGCATTGT+AGG | - | chr3.1:85457497-85457516 | None:intergenic | 30.0% |
| !!! | GATTTTTAAGAAGTACCACT+AGG | + | chr3.1:85460176-85460195 | MS.gene072945:intron | 30.0% |
| !!! | GCATTAGATTTTTTGCTCTT+TGG | + | chr3.1:85459667-85459686 | MS.gene072945:intron | 30.0% |
| !!! | GTGGTTTTATTACATCTCTT+AGG | + | chr3.1:85457923-85457942 | MS.gene072945:intron | 30.0% |
| !!! | TTTGGTGCCAAATTTTCATT+AGG | + | chr3.1:85461319-85461338 | MS.gene072945:intron | 30.0% |
| AAAAAATCCTGAAGCCTTAG+TGG | - | chr3.1:85459582-85459601 | None:intergenic | 35.0% | |
| AAAATATTCCTGAAGCCTAG+TGG | - | chr3.1:85460194-85460213 | None:intergenic | 35.0% | |
| AAACTACGAAAGGTTCAACT+AGG | + | chr3.1:85461138-85461157 | MS.gene072945:CDS | 35.0% | |
| AAACTATTCTACCACCAAAG+CGG | - | chr3.1:85461293-85461312 | None:intergenic | 35.0% | |
| AAAGAGATGGTACATGGATA+AGG | + | chr3.1:85457140-85457159 | MS.gene072945:intron | 35.0% | |
| AAAGCAATGACATGCATAAC+AGG | + | chr3.1:85457165-85457184 | MS.gene072945:intron | 35.0% | |
| AACTACGAAAGGTTCAACTA+GGG | + | chr3.1:85461139-85461158 | MS.gene072945:CDS | 35.0% | |
| AACTCCTTATCAGTCTATGA+TGG | - | chr3.1:85460091-85460110 | None:intergenic | 35.0% | |
| AAGAAATAGAGGACATTGGA+AGG | + | chr3.1:85458015-85458034 | MS.gene072945:intron | 35.0% | |
| AAGGATCATGAACTACTCAA+AGG | - | chr3.1:85456510-85456529 | None:intergenic | 35.0% | |
| AAGGTAGGGAAAAACATTGA+AGG | - | chr3.1:85459036-85459055 | None:intergenic | 35.0% | |
| AAGTCCATCATAGACTGATA+AGG | + | chr3.1:85460084-85460103 | MS.gene072945:intron | 35.0% | |
| AATCATGAAATGGGGGAAAA+AGG | - | chr3.1:85459728-85459747 | None:intergenic | 35.0% | |
| AATGATAAGGAGTTAGAAGG+TGG | + | chr3.1:85459482-85459501 | MS.gene072945:intron | 35.0% | |
| AGAGAGAGAATCAATAAGGA+AGG | + | chr3.1:85456151-85456170 | MS.gene072945:CDS | 35.0% | |
| AGAGGGATACATTTGATATG+AGG | - | chr3.1:85457648-85457667 | None:intergenic | 35.0% | |
| AGGAAAATAGCAAATGACTG+TGG | + | chr3.1:85456387-85456406 | MS.gene072945:CDS | 35.0% | |
| AGTCAAATTACTAGAGGTAG+AGG | + | chr3.1:85456971-85456990 | MS.gene072945:intron | 35.0% | |
| AGTCCCTATAGTAGAAAAGA+TGG | + | chr3.1:85456866-85456885 | MS.gene072945:intron | 35.0% | |
| ATAAAACCCTTCTCATTTGG+GGG | + | chr3.1:85458070-85458089 | MS.gene072945:intron | 35.0% | |
| ATAGAGCAAATAGAGAAGAG+AGG | - | chr3.1:85457676-85457695 | None:intergenic | 35.0% | |
| ATGTTTAGAGAAAGCCTGTA+TGG | + | chr3.1:85460389-85460408 | MS.gene072945:intron | 35.0% | |
| CAAAAAATCTAATGCCACCA+AGG | - | chr3.1:85459662-85459681 | None:intergenic | 35.0% | |
| CAACATTAGAGATAGAGTTG+GGG | + | chr3.1:85456842-85456861 | MS.gene072945:intron | 35.0% | |
| CAGAATGATAAGGAGTTAGA+AGG | + | chr3.1:85459479-85459498 | MS.gene072945:intron | 35.0% | |
| CAGACAGATGACATATGAAA+TGG | - | chr3.1:85460667-85460686 | None:intergenic | 35.0% | |
| CATATCAAATGTATCCCTCT+CGG | + | chr3.1:85457648-85457667 | MS.gene072945:intron | 35.0% | |
| CGATGAAGATGACAAACAAA+AGG | - | chr3.1:85459924-85459943 | None:intergenic | 35.0% | |
| CTACTTCTCAAAAGATATGG+AGG | - | chr3.1:85458743-85458762 | None:intergenic | 35.0% | |
| CTATTTGCTCTATCTGTTCA+GGG | + | chr3.1:85457683-85457702 | MS.gene072945:intron | 35.0% | |
| CTCCTTATCATTCTGTATGA+TGG | - | chr3.1:85459474-85459493 | None:intergenic | 35.0% | |
| CTTGAAACTGCAATAAGGTA+GGG | - | chr3.1:85459050-85459069 | None:intergenic | 35.0% | |
| GACAACATTAGAGATAGAGT+TGG | + | chr3.1:85456840-85456859 | MS.gene072945:intron | 35.0% | |
| GACCATCATACAGAATGATA+AGG | + | chr3.1:85459469-85459488 | MS.gene072945:intron | 35.0% | |
| GAGGGATACATTTGATATGA+GGG | - | chr3.1:85457647-85457666 | None:intergenic | 35.0% | |
| GAGTTAACAAAAAGAGAAGC+AGG | - | chr3.1:85459292-85459311 | None:intergenic | 35.0% | |
| GCAGTAAGACATGTAATGTA+CGG | - | chr3.1:85459608-85459627 | None:intergenic | 35.0% | |
| GGCATTTAAGAATCCTAATC+AGG | + | chr3.1:85460844-85460863 | MS.gene072945:intron | 35.0% | |
| GTGTATCTTCTTTCTGTATG+AGG | + | chr3.1:85459755-85459774 | MS.gene072945:intron | 35.0% | |
| TAAACATGCACAAACCATAC+AGG | - | chr3.1:85460406-85460425 | None:intergenic | 35.0% | |
| TAACAGGTTTGATGAGAATG+TGG | + | chr3.1:85457181-85457200 | MS.gene072945:intron | 35.0% | |
| TACCTTATTGCAGTTTCAAG+AGG | + | chr3.1:85459050-85459069 | MS.gene072945:intron | 35.0% | |
| TACTAAGAACAAGATGTGCT+AGG | - | chr3.1:85457769-85457788 | None:intergenic | 35.0% | |
| TAGACTGATAAGGAGTTAGA+AGG | + | chr3.1:85460094-85460113 | MS.gene072945:intron | 35.0% | |
| TAGTATGGATGGTTGATTAG+AGG | + | chr3.1:85460446-85460465 | MS.gene072945:intron | 35.0% | |
| TATTTGTATTCACGTTGCGT+TGG | + | chr3.1:85456781-85456800 | MS.gene072945:intron | 35.0% | |
| TCATATGTCATCTGTCTGTT+GGG | + | chr3.1:85460669-85460688 | MS.gene072945:intron | 35.0% | |
| TCTATTTGCTCTATCTGTTC+AGG | + | chr3.1:85457682-85457701 | MS.gene072945:intron | 35.0% | |
| TCTTAGTTCAGGATCTTGAA+AGG | + | chr3.1:85456292-85456311 | MS.gene072945:intron | 35.0% | |
| TCTTGAAACTGCAATAAGGT+AGG | - | chr3.1:85459051-85459070 | None:intergenic | 35.0% | |
| TGACAAACAAAAGGGACAAA+AGG | - | chr3.1:85459915-85459934 | None:intergenic | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | + | chr3.1:85458224-85458243 | MS.gene072945:intron | 35.0% | |
| TGTACAATGAGTGTAACATC+TGG | - | chr3.1:85460334-85460353 | None:intergenic | 35.0% | |
| TTAACAAAAAGAGAAGCAGG+AGG | - | chr3.1:85459289-85459308 | None:intergenic | 35.0% | |
| TTCATATGTCATCTGTCTGT+TGG | + | chr3.1:85460668-85460687 | MS.gene072945:intron | 35.0% | |
| ! | AGTGAAAAAGTTTTGCTAGG+GGG | + | chr3.1:85457348-85457367 | MS.gene072945:intron | 35.0% |
| ! | CCACCATCTTTTCTACTATA+GGG | - | chr3.1:85456872-85456891 | None:intergenic | 35.0% |
| ! | GATTTTATGGAGTCGATTGA+TGG | + | chr3.1:85460569-85460588 | MS.gene072945:intron | 35.0% |
| ! | GGGTTCCATTACTATAGTTT+TGG | - | chr3.1:85458722-85458741 | None:intergenic | 35.0% |
| ! | TCCACCATCTTTTCTACTAT+AGG | - | chr3.1:85456873-85456892 | None:intergenic | 35.0% |
| ! | TTCTACCTACAATGCTCTTT+TGG | + | chr3.1:85457489-85457508 | MS.gene072945:CDS | 35.0% |
| ! | TTCTCTGATGAAAGCTTTTC+AGG | + | chr3.1:85461239-85461258 | MS.gene072945:CDS | 35.0% |
| !! | GAAACCTTAAGGCTTTGTTT+GGG | - | chr3.1:85458431-85458450 | None:intergenic | 35.0% |
| !! | GTGATTGAAAAGTACCACTA+AGG | + | chr3.1:85459565-85459584 | MS.gene072945:intron | 35.0% |
| !! | GTGTTGTGTTGATTTGACTT+TGG | + | chr3.1:85459199-85459218 | MS.gene072945:intron | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+AGG | + | chr3.1:85456877-85456896 | MS.gene072945:intron | 35.0% |
| !! | TTATCAGTCTATGATGGACT+TGG | - | chr3.1:85460085-85460104 | None:intergenic | 35.0% |
| !!! | ACTGCTTCAACTTGTTTTGT+TGG | + | chr3.1:85460823-85460842 | MS.gene072945:intron | 35.0% |
| !!! | AGTATTTTGGGTTTGAAGCA+TGG | + | chr3.1:85458470-85458489 | MS.gene072945:intron | 35.0% |
| !!! | GTTTTTTTCCCCTTTCTGTT+AGG | + | chr3.1:85456562-85456581 | MS.gene072945:intron | 35.0% |
| !!! | TTTGGTGCCAACTTTTTCAT+AGG | + | chr3.1:85459685-85459704 | MS.gene072945:intron | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGCCA+GGG | - | chr3.1:85458258-85458277 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTTGTGGTGGCC+AGG | - | chr3.1:85458259-85458278 | None:intergenic | 35.0% |
| AAAATCTAATGCCACCAAGG+CGG | - | chr3.1:85459659-85459678 | None:intergenic | 40.0% | |
| AAATAGAGGACATTGGAAGG+AGG | + | chr3.1:85458018-85458037 | MS.gene072945:intron | 40.0% | |
| AACTCCCAAACAAAGCCTTA+AGG | + | chr3.1:85458424-85458443 | MS.gene072945:intron | 40.0% | |
| AATTGTCAAGGGAAGTGAAC+AGG | + | chr3.1:85459122-85459141 | MS.gene072945:CDS | 40.0% | |
| ACAGGTATTCATCGGAGAAT+TGG | + | chr3.1:85457564-85457583 | MS.gene072945:intron | 40.0% | |
| AGAACTGTATGCTCAAATCC+AGG | + | chr3.1:85457282-85457301 | MS.gene072945:CDS | 40.0% | |
| AGCAAGTTCCTAACAGAAAG+GGG | - | chr3.1:85456573-85456592 | None:intergenic | 40.0% | |
| AGGATATCCACTCTTAGTTC+AGG | + | chr3.1:85456281-85456300 | MS.gene072945:intron | 40.0% | |
| AGTAAGGAGAGTAGATCAGA+TGG | + | chr3.1:85456943-85456962 | MS.gene072945:intron | 40.0% | |
| AGTTCAGGATCTTGAAAGGA+AGG | + | chr3.1:85456296-85456315 | MS.gene072945:intron | 40.0% | |
| ATTTCATGGCGCTATAGAAG+TGG | - | chr3.1:85459377-85459396 | None:intergenic | 40.0% | |
| CAGCAAGTTCCTAACAGAAA+GGG | - | chr3.1:85456574-85456593 | None:intergenic | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | + | chr3.1:85458226-85458245 | MS.gene072945:intron | 40.0% | |
| CATTCTCTTAGCGAATCACT+TGG | + | chr3.1:85456432-85456451 | MS.gene072945:CDS | 40.0% | |
| CCCTATAGTAGAAAAGATGG+TGG | + | chr3.1:85456869-85456888 | MS.gene072945:intron | 40.0% | |
| CGGGAAAGATCAATTGTTAG+AGG | + | chr3.1:85460469-85460488 | MS.gene072945:intron | 40.0% | |
| CTTACTGGACGATTTCTGAT+TGG | - | chr3.1:85456649-85456668 | None:intergenic | 40.0% | |
| GAGGGTAGTCAAATTACTAG+AGG | + | chr3.1:85456965-85456984 | MS.gene072945:intron | 40.0% | |
| GATCCACACTCGATTAATCA+AGG | + | chr3.1:85458767-85458786 | MS.gene072945:intron | 40.0% | |
| GCATAAAATATGCAAGGTCC+GGG | + | chr3.1:85458225-85458244 | MS.gene072945:intron | 40.0% | |
| GGAGAACAGATATGTACAGA+AGG | - | chr3.1:85457748-85457767 | None:intergenic | 40.0% | |
| GGAGTAAGTGGAAGAAATAG+AGG | + | chr3.1:85458004-85458023 | MS.gene072945:intron | 40.0% | |
| GGTAAATGTAAGAAGGCAAG+TGG | - | chr3.1:85457854-85457873 | None:intergenic | 40.0% | |
| GGTTTGTGCATGTTTAGAGA+AGG | + | chr3.1:85460410-85460429 | MS.gene072945:intron | 40.0% | |
| GTGGAAGAAATAGAGGACAT+TGG | + | chr3.1:85458011-85458030 | MS.gene072945:intron | 40.0% | |
| GTTACTACTACTGTTGCTGT+TGG | - | chr3.1:85460733-85460752 | None:intergenic | 40.0% | |
| TAAGAATCCTAATCAGGGAC+TGG | + | chr3.1:85460850-85460869 | MS.gene072945:intron | 40.0% | |
| TATGGATGGTTGATTAGAGG+CGG | + | chr3.1:85460449-85460468 | MS.gene072945:intron | 40.0% | |
| TCAAGATCCTGAACTAAGAG+TGG | - | chr3.1:85456291-85456310 | None:intergenic | 40.0% | |
| TCATTCTGTATGATGGTCGA+TGG | - | chr3.1:85459467-85459486 | None:intergenic | 40.0% | |
| TCCATGGAAGGAATTGTCAA+GGG | + | chr3.1:85459111-85459130 | MS.gene072945:CDS | 40.0% | |
| TGACATATGAAATGGGTGCA+TGG | - | chr3.1:85460659-85460678 | None:intergenic | 40.0% | |
| TTAGTTCCCCCAAATGAGAA+GGG | - | chr3.1:85458079-85458098 | None:intergenic | 40.0% | |
| TTATTATATCGTCGCCGCTT+TGG | + | chr3.1:85461276-85461295 | MS.gene072945:intron | 40.0% | |
| TTCCATGGAAGGAATTGTCA+AGG | + | chr3.1:85459110-85459129 | MS.gene072945:CDS | 40.0% | |
| TTCTAATCCAGTCCCTGATT+AGG | - | chr3.1:85460860-85460879 | None:intergenic | 40.0% | |
| TTGGTATTTGCCACTGTACA+GGG | + | chr3.1:85457439-85457458 | MS.gene072945:intron | 40.0% | |
| TTTGGGGGGAGAGAAATATA+GGG | - | chr3.1:85458381-85458400 | None:intergenic | 40.0% | |
| ! | AAGCTTGTTCATTCCATGGA+AGG | + | chr3.1:85459099-85459118 | MS.gene072945:CDS | 40.0% |
| ! | ATTGTATTGGAGGAGGGTTT+TGG | + | chr3.1:85458102-85458121 | MS.gene072945:intron | 40.0% |
| ! | TGGTTTGTGAGATTGATTGC+CGG | + | chr3.1:85456095-85456114 | MS.gene072945:CDS | 40.0% |
| ! | TTGTATTGGAGGAGGGTTTT+GGG | + | chr3.1:85458103-85458122 | MS.gene072945:intron | 40.0% |
| ! | TTTAGTTCCCCCAAATGAGA+AGG | - | chr3.1:85458080-85458099 | None:intergenic | 40.0% |
| !! | AAAAGTACCACTAAGGCTTC+AGG | + | chr3.1:85459572-85459591 | MS.gene072945:intron | 40.0% |
| !! | AAGAGTGTTATGTGGATGAG+TGG | + | chr3.1:85460273-85460292 | MS.gene072945:intron | 40.0% |
| !! | GCTGAGATAAGAGTGTTATG+TGG | + | chr3.1:85460265-85460284 | MS.gene072945:intron | 40.0% |
| !! | GGAAACCTTAAGGCTTTGTT+TGG | - | chr3.1:85458432-85458451 | None:intergenic | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr3.1:85458424-85458443 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | + | chr3.1:85457941-85457960 | MS.gene072945:intron | 40.0% |
| AACTCTTACCCCACTATGTG+GGG | - | chr3.1:85457110-85457129 | None:intergenic | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr3.1:85456946-85456965 | MS.gene072945:intron | 45.0% | |
| AATTCCTGGCCAACTGATCA+GGG | + | chr3.1:85458589-85458608 | MS.gene072945:intron | 45.0% | |
| ACATTGGAAGGAGGAGCTTT+GGG | + | chr3.1:85458027-85458046 | MS.gene072945:intron | 45.0% | |
| ACCCAAAATACTCTCGCATG+AGG | - | chr3.1:85458462-85458481 | None:intergenic | 45.0% | |
| ACGTGTGTGAATGGTACAGA+AGG | - | chr3.1:85459868-85459887 | None:intergenic | 45.0% | |
| AGAGTTAACTGCAGCTCTTG+AGG | + | chr3.1:85459177-85459196 | MS.gene072945:intron | 45.0% | |
| AGGAGAGTAGATCAGATGGA+GGG | + | chr3.1:85456947-85456966 | MS.gene072945:intron | 45.0% | |
| AGGGAAAGTGGGAAACCTTA+AGG | - | chr3.1:85458442-85458461 | None:intergenic | 45.0% | |
| AGTGGCGAACATAGAATTCC+TGG | + | chr3.1:85458575-85458594 | MS.gene072945:intron | 45.0% | |
| AGTTGTTGGGTGAAGAGACT+TGG | + | chr3.1:85458833-85458852 | MS.gene072945:intron | 45.0% | |
| ATGGATGGTTGATTAGAGGC+GGG | + | chr3.1:85460450-85460469 | MS.gene072945:intron | 45.0% | |
| ATTTCGCAGAGCTATAGCAG+CGG | - | chr3.1:85460008-85460027 | None:intergenic | 45.0% | |
| CAACTCTTACCCCACTATGT+GGG | - | chr3.1:85457111-85457130 | None:intergenic | 45.0% | |
| CCACACTCGATTAATCAAGG+AGG | + | chr3.1:85458770-85458789 | MS.gene072945:intron | 45.0% | |
| CCCAAAATACTCTCGCATGA+GGG | - | chr3.1:85458461-85458480 | None:intergenic | 45.0% | |
| CCTCCTTGATTAATCGAGTG+TGG | - | chr3.1:85458773-85458792 | None:intergenic | 45.0% | |
| CTGTACAGTGGCAAATACCA+AGG | - | chr3.1:85457440-85457459 | None:intergenic | 45.0% | |
| CTTGGTATTTGCCACTGTAC+AGG | + | chr3.1:85457438-85457457 | MS.gene072945:intron | 45.0% | |
| GAATGTGGAACCTAGTTGTC+TGG | + | chr3.1:85457196-85457215 | MS.gene072945:intron | 45.0% | |
| GAGTGGCAATTTGGATGAAC+TGG | + | chr3.1:85456075-85456094 | MS.gene072945:CDS | 45.0% | |
| GCAAAATGTGTAAAACGCCG+CGG | + | chr3.1:85459348-85459367 | MS.gene072945:intron | 45.0% | |
| GCAGCAAGTTCCTAACAGAA+AGG | - | chr3.1:85456575-85456594 | None:intergenic | 45.0% | |
| GCGGCGACGATATAATAAAC+TGG | - | chr3.1:85461274-85461293 | None:intergenic | 45.0% | |
| GCTCCACAACATTCATCTTC+CGG | - | chr3.1:85456117-85456136 | None:intergenic | 45.0% | |
| GGCCTCTTGAAACTGCAATA+AGG | - | chr3.1:85459055-85459074 | None:intergenic | 45.0% | |
| GTTGTTGGGTGAAGAGACTT+GGG | + | chr3.1:85458834-85458853 | MS.gene072945:intron | 45.0% | |
| TCCCTTGACAATTCCTTCCA+TGG | - | chr3.1:85459115-85459134 | None:intergenic | 45.0% | |
| TGGACGATTTCTGATTGGCA+CGG | - | chr3.1:85456644-85456663 | None:intergenic | 45.0% | |
| TTCACGTTGCGTTGGATATG+TGG | + | chr3.1:85456789-85456808 | MS.gene072945:intron | 45.0% | |
| TTGCCGGAAGATGAATGTTG+TGG | + | chr3.1:85456111-85456130 | MS.gene072945:CDS | 45.0% | |
| TTGGGGGGAGAGAAATATAG+GGG | - | chr3.1:85458380-85458399 | None:intergenic | 45.0% | |
| ! | ACGACCATCAGTGCTACTAA+AGG | - | chr3.1:85459076-85459095 | None:intergenic | 45.0% |
| ! | ACTACTGTTGCTGTTGGCAA+AGG | - | chr3.1:85460727-85460746 | None:intergenic | 45.0% |
| ! | CCTATATGTGGGTTAACGAG+CGG | - | chr3.1:85459979-85459998 | None:intergenic | 45.0% |
| ! | CTACTGTTGCTGTTGGCAAA+GGG | - | chr3.1:85460726-85460745 | None:intergenic | 45.0% |
| ! | CTTTGGGGGGAGAGAAATAT+AGG | - | chr3.1:85458382-85458401 | None:intergenic | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr3.1:85457946-85457965 | MS.gene072945:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr3.1:85458419-85458438 | None:intergenic | 45.0% |
| ! | GCGGCGTTTTACACATTTTG+CGG | - | chr3.1:85459349-85459368 | None:intergenic | 45.0% |
| ! | TACTGTTGCTGTTGGCAAAG+GGG | - | chr3.1:85460725-85460744 | None:intergenic | 45.0% |
| ! | TCGATGTTTTCCCTGTACAG+TGG | - | chr3.1:85457452-85457471 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr3.1:85458197-85458216 | MS.gene072945:intron | 45.0% |
| ! | TGTATGATGGTCGATGGACT+TGG | - | chr3.1:85459461-85459480 | None:intergenic | 45.0% |
| ! | TGTATTGGAGGAGGGTTTTG+GGG | + | chr3.1:85458104-85458123 | MS.gene072945:intron | 45.0% |
| !! | AAGAAGTACCACTAGGCTTC+AGG | + | chr3.1:85460183-85460202 | MS.gene072945:intron | 45.0% |
| !! | AGATGGTGGAAACTAGGCTT+AGG | + | chr3.1:85456883-85456902 | MS.gene072945:intron | 45.0% |
| !! | AGGAACTTGCTGCTAGACTA+AGG | + | chr3.1:85456582-85456601 | MS.gene072945:intron | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr3.1:85457945-85457964 | MS.gene072945:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr3.1:85458420-85458439 | None:intergenic | 45.0% |
| !! | GGAACTTGCTGCTAGACTAA+GGG | + | chr3.1:85456583-85456602 | MS.gene072945:intron | 45.0% |
| !!! | CCCTCATGCGAGAGTATTTT+GGG | + | chr3.1:85458458-85458477 | MS.gene072945:intron | 45.0% |
| !!! | TCCCTCATGCGAGAGTATTT+TGG | + | chr3.1:85458457-85458476 | MS.gene072945:intron | 45.0% |
| ACTATGTGGGGTCAGCTACA+TGG | - | chr3.1:85457098-85457117 | None:intergenic | 50.0% | |
| ACTCTCGCATGAGGGAAAGT+GGG | - | chr3.1:85458453-85458472 | None:intergenic | 50.0% | |
| AGCGGTAGCTGCCTATATGT+GGG | - | chr3.1:85459990-85460009 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACATAG+TGG | + | chr3.1:85457097-85457116 | MS.gene072945:intron | 50.0% | |
| CATTGGAAGGAGGAGCTTTG+GGG | + | chr3.1:85458028-85458047 | MS.gene072945:intron | 50.0% | |
| CCAACTCTTACCCCACTATG+TGG | - | chr3.1:85457112-85457131 | None:intergenic | 50.0% | |
| CCGCTCGTTAACCCACATAT+AGG | + | chr3.1:85459976-85459995 | MS.gene072945:intron | 50.0% | |
| CGATTTCTGATTGGCACGGT+AGG | - | chr3.1:85456640-85456659 | None:intergenic | 50.0% | |
| GAATTCCTGGCCAACTGATC+AGG | + | chr3.1:85458588-85458607 | MS.gene072945:intron | 50.0% | |
| GACATTGGAAGGAGGAGCTT+TGG | + | chr3.1:85458026-85458045 | MS.gene072945:intron | 50.0% | |
| GATAGATATGCCGCAGCAGT+CGG | + | chr3.1:85461198-85461217 | MS.gene072945:CDS | 50.0% | |
| GCTTGTGCAGGTATGAACAC+CGG | + | chr3.1:85457254-85457273 | MS.gene072945:intron | 50.0% | |
| GGGACAAAAGGAGAAGCAAG+AGG | - | chr3.1:85459903-85459922 | None:intergenic | 50.0% | |
| TACTCTCGCATGAGGGAAAG+TGG | - | chr3.1:85458454-85458473 | None:intergenic | 50.0% | |
| TGGTGGAAACTAGGCTTAGG+CGG | + | chr3.1:85456886-85456905 | MS.gene072945:intron | 50.0% | |
| TGTAGCTGACCCCACATAGT+GGG | + | chr3.1:85457098-85457117 | MS.gene072945:intron | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | + | chr3.1:85457951-85457970 | MS.gene072945:intron | 50.0% | |
| ! | ATTGGATGAAGGCACGTGAG+TGG | + | chr3.1:85457904-85457923 | MS.gene072945:intron | 50.0% |
| ! | CCACATAGTGGGGTAAGAGT+TGG | + | chr3.1:85457109-85457128 | MS.gene072945:intron | 50.0% |
| ! | GAGGCCTTTAGTAGCACTGA+TGG | + | chr3.1:85459069-85459088 | MS.gene072945:CDS | 50.0% |
| ! | GAGTCGATTGATGGCTGACT+TGG | + | chr3.1:85460578-85460597 | MS.gene072945:intron | 50.0% |
| ! | GCGGAGTTTCGCGTATTTTG+AGG | - | chr3.1:85459960-85459979 | None:intergenic | 50.0% |
| ! | TTATATCGTCGCCGCTTTGG+TGG | + | chr3.1:85461279-85461298 | MS.gene072945:intron | 50.0% |
| !! | GAGCATACAGTTCTGAGAGC+CGG | - | chr3.1:85457276-85457295 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr3.1:85457944-85457963 | MS.gene072945:intron | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr3.1:85458421-85458440 | None:intergenic | 50.0% |
| !! | GTATTGGAGGAGGGTTTTGG+GGG | + | chr3.1:85458105-85458124 | MS.gene072945:intron | 50.0% |
| !! | TCGATTGATGGCTGACTTGG+TGG | + | chr3.1:85460581-85460600 | MS.gene072945:intron | 50.0% |
| AGGGAAGGGAAGGAAAGGCT+TGG | + | chr3.1:85457970-85457989 | MS.gene072945:intron | 55.0% | |
| CAGCGGTAGCTGCCTATATG+TGG | - | chr3.1:85459991-85460010 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr3.1:85458195-85458214 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr3.1:85458192-85458211 | MS.gene072945:intron | 55.0% | |
| CGCTATAGAAGTGGTAGCCG+CGG | - | chr3.1:85459368-85459387 | None:intergenic | 55.0% | |
| CTGGCCAACTGATCAGGGTA+GGG | + | chr3.1:85458594-85458613 | MS.gene072945:intron | 55.0% | |
| GAGGGGAAGGAAAGGCTTTG+GGG | - | chr3.1:85458397-85458416 | None:intergenic | 55.0% | |
| GAGTTTGGAGGGGAAGGGAA+GGG | + | chr3.1:85457956-85457975 | MS.gene072945:intron | 55.0% | |
| GGAGGGGAAGGAAAGGCTTT+GGG | - | chr3.1:85458398-85458417 | None:intergenic | 55.0% | |
| GGATCCCTACCCTGATCAGT+TGG | - | chr3.1:85458601-85458620 | None:intergenic | 55.0% | |
| GGGTGCATGGCTGAATGCTA+TGG | - | chr3.1:85460646-85460665 | None:intergenic | 55.0% | |
| GTAGCTGACCCCACATAGTG+GGG | + | chr3.1:85457099-85457118 | MS.gene072945:intron | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr3.1:85457950-85457969 | MS.gene072945:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr3.1:85458415-85458434 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr3.1:85458416-85458435 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr3.1:85458414-85458433 | None:intergenic | 55.0% | |
| ! | AGGGGAAGGAAAGGCTTTGG+GGG | - | chr3.1:85458396-85458415 | None:intergenic | 55.0% |
| ! | CTTATGCTCACCGACTGCTG+CGG | - | chr3.1:85461211-85461230 | None:intergenic | 55.0% |
| !! | AGAGAAGAGAGGCACCGAGA+GGG | - | chr3.1:85457665-85457684 | None:intergenic | 55.0% |
| !! | TAGAGAAGAGAGGCACCGAG+AGG | - | chr3.1:85457666-85457685 | None:intergenic | 55.0% |
| !!! | AGGGTTTTGGGGGTTTGGGA+GGG | + | chr3.1:85458115-85458134 | MS.gene072945:intron | 55.0% |
| !!! | GAGGAGGGTTTTGGGGGTTT+GGG | + | chr3.1:85458111-85458130 | MS.gene072945:intron | 55.0% |
| AAGGTCCGGGGTTCAAACCC+TGG | + | chr3.1:85458238-85458257 | MS.gene072945:intron | 60.0% | |
| CCTACCCTGATCAGTTGGCC+AGG | - | chr3.1:85458596-85458615 | None:intergenic | 60.0% | |
| CCTGGCCAACTGATCAGGGT+AGG | + | chr3.1:85458593-85458612 | MS.gene072945:intron | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+AGG | + | chr3.1:85457955-85457974 | MS.gene072945:intron | 60.0% | |
| GGGAGGGGAAGGAAAGGCTT+TGG | - | chr3.1:85458399-85458418 | None:intergenic | 60.0% | |
| GGGGAAGGGAAGGGAAGGAA+AGG | + | chr3.1:85457965-85457984 | MS.gene072945:intron | 60.0% | |
| TTGGAGGGGAAGGGAAGGGA+AGG | + | chr3.1:85457960-85457979 | MS.gene072945:intron | 60.0% | |
| TTGGAGGGGAGGGGAAGGAA+AGG | - | chr3.1:85458405-85458424 | None:intergenic | 60.0% | |
| !! | GAAACTAGAAGGCGCCGCCT+TGG | + | chr3.1:85459642-85459661 | MS.gene072945:intron | 60.0% |
| !! | GGGGAAGGAAAGGCTTTGGG+GGG | - | chr3.1:85458395-85458414 | None:intergenic | 60.0% |
| !!! | GAGGGTTTTGGGGGTTTGGG+AGG | + | chr3.1:85458114-85458133 | MS.gene072945:intron | 60.0% |
| !!! | GGAGGAGGGTTTTGGGGGTT+TGG | + | chr3.1:85458110-85458129 | MS.gene072945:intron | 60.0% |
| GGAGTTTGGAGGGGAGGGGA+AGG | - | chr3.1:85458410-85458429 | None:intergenic | 65.0% | |
| GGTGGCCAGGGTTTGAACCC+CGG | - | chr3.1:85458246-85458265 | None:intergenic | 65.0% | |
| !! | ACTAGAAGGCGCCGCCTTGG+TGG | + | chr3.1:85459645-85459664 | MS.gene072945:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 85456073 | 85461346 | 85456073 | ID=MS.gene072945 |
| chr3.1 | mRNA | 85456073 | 85461346 | 85456073 | ID=MS.gene072945.t1;Parent=MS.gene072945 |
| chr3.1 | exon | 85456073 | 85456222 | 85456073 | ID=MS.gene072945.t1.exon1;Parent=MS.gene072945.t1 |
| chr3.1 | CDS | 85456073 | 85456222 | 85456073 | ID=cds.MS.gene072945.t1;Parent=MS.gene072945.t1 |
| chr3.1 | exon | 85456303 | 85456476 | 85456303 | ID=MS.gene072945.t1.exon2;Parent=MS.gene072945.t1 |
| chr3.1 | CDS | 85456303 | 85456476 | 85456303 | ID=cds.MS.gene072945.t1;Parent=MS.gene072945.t1 |
| chr3.1 | exon | 85456584 | 85456663 | 85456584 | ID=MS.gene072945.t1.exon3;Parent=MS.gene072945.t1 |
| chr3.1 | CDS | 85456584 | 85456663 | 85456584 | ID=cds.MS.gene072945.t1;Parent=MS.gene072945.t1 |
| chr3.1 | exon | 85457264 | 85457303 | 85457264 | ID=MS.gene072945.t1.exon4;Parent=MS.gene072945.t1 |
| chr3.1 | CDS | 85457264 | 85457303 | 85457264 | ID=cds.MS.gene072945.t1;Parent=MS.gene072945.t1 |
| chr3.1 | exon | 85457460 | 85457567 | 85457460 | ID=MS.gene072945.t1.exon5;Parent=MS.gene072945.t1 |
| chr3.1 | CDS | 85457460 | 85457567 | 85457460 | ID=cds.MS.gene072945.t1;Parent=MS.gene072945.t1 |
| chr3.1 | exon | 85459063 | 85459143 | 85459063 | ID=MS.gene072945.t1.exon6;Parent=MS.gene072945.t1 |
| chr3.1 | CDS | 85459063 | 85459143 | 85459063 | ID=cds.MS.gene072945.t1;Parent=MS.gene072945.t1 |
| chr3.1 | exon | 85461138 | 85461260 | 85461138 | ID=MS.gene072945.t1.exon7;Parent=MS.gene072945.t1 |
| chr3.1 | CDS | 85461138 | 85461260 | 85461138 | ID=cds.MS.gene072945.t1;Parent=MS.gene072945.t1 |
| chr3.1 | exon | 85461341 | 85461346 | 85461341 | ID=MS.gene072945.t1.exon8;Parent=MS.gene072945.t1 |
| chr3.1 | CDS | 85461341 | 85461346 | 85461341 | ID=cds.MS.gene072945.t1;Parent=MS.gene072945.t1 |
| Gene Sequence |
| Protein sequence |
