Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34085.t1 | KEH43482.1 | 95.6 | 294 | 13 | 0 | 1 | 294 | 5 | 298 | 2.60E-154 | 554.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34085.t1 | A0A072VQ01 | 95.6 | 294 | 13 | 0 | 1 | 294 | 1 | 294 | 1.9e-154 | 554.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene34085 | 0.818844 | 1.59E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene34085 | 0.821114 | 4.79E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene34085 | 0.856488 | 3.11E-62 | -1.69E-46 |
| MS.gene049669 | MS.gene34085 | 0.821514 | 3.88E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene34085 | 0.80831 | 3.30E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene34085 | 0.831325 | 1.78E-55 | -1.69E-46 |
| MS.gene050227 | MS.gene34085 | 0.850057 | 2.17E-60 | -1.69E-46 |
| MS.gene050228 | MS.gene34085 | 0.842491 | 2.50E-58 | -1.69E-46 |
| MS.gene050237 | MS.gene34085 | 0.817913 | 2.58E-52 | -1.69E-46 |
| MS.gene050303 | MS.gene34085 | 0.807267 | 5.49E-50 | -1.69E-46 |
| MS.gene050330 | MS.gene34085 | -0.831811 | 1.35E-55 | -1.69E-46 |
| MS.gene050438 | MS.gene34085 | 0.816398 | 5.65E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene34085 | 0.837923 | 3.90E-57 | -1.69E-46 |
| MS.gene050558 | MS.gene34085 | 0.824551 | 7.59E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene34085 | -0.824971 | 6.04E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene34085 | 0.804919 | 1.71E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene34085 | 0.868499 | 6.24E-66 | -1.69E-46 |
| MS.gene050721 | MS.gene34085 | 0.867622 | 1.19E-65 | -1.69E-46 |
| MS.gene050724 | MS.gene34085 | 0.842018 | 3.34E-58 | -1.69E-46 |
| MS.gene050750 | MS.gene34085 | 0.841254 | 5.31E-58 | -1.69E-46 |
| MS.gene050780 | MS.gene34085 | 0.828183 | 1.04E-54 | -1.69E-46 |
| MS.gene050787 | MS.gene34085 | 0.805935 | 1.05E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene34085 | 0.83977 | 1.30E-57 | -1.69E-46 |
| MS.gene050824 | MS.gene34085 | 0.838218 | 3.28E-57 | -1.69E-46 |
| MS.gene050953 | MS.gene34085 | 0.850844 | 1.31E-60 | -1.69E-46 |
| MS.gene050987 | MS.gene34085 | 0.805917 | 1.06E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene34085 | -0.817829 | 2.69E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene34085 | 0.806745 | 7.09E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene34085 | 0.800602 | 1.33E-48 | -1.69E-46 |
| MS.gene051983 | MS.gene34085 | 0.817416 | 3.34E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene34085 | 0.883571 | 4.01E-71 | -1.69E-46 |
| MS.gene052302 | MS.gene34085 | 0.858066 | 1.06E-62 | -1.69E-46 |
| MS.gene052309 | MS.gene34085 | -0.827936 | 1.19E-54 | -1.69E-46 |
| MS.gene052358 | MS.gene34085 | -0.828565 | 8.38E-55 | -1.69E-46 |
| MS.gene052376 | MS.gene34085 | 0.870719 | 1.18E-66 | -1.69E-46 |
| MS.gene052389 | MS.gene34085 | 0.819871 | 9.25E-53 | -1.69E-46 |
| MS.gene052464 | MS.gene34085 | 0.803313 | 3.70E-49 | -1.69E-46 |
| MS.gene052561 | MS.gene34085 | 0.813989 | 1.94E-51 | -1.69E-46 |
| MS.gene052856 | MS.gene34085 | 0.837568 | 4.81E-57 | -1.69E-46 |
| MS.gene052858 | MS.gene34085 | 0.852577 | 4.21E-61 | -1.69E-46 |
| MS.gene052860 | MS.gene34085 | 0.855207 | 7.37E-62 | -1.69E-46 |
| MS.gene053216 | MS.gene34085 | 0.816332 | 5.84E-52 | -1.69E-46 |
| MS.gene053630 | MS.gene34085 | 0.834251 | 3.34E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene34085 | 0.837438 | 5.20E-57 | -1.69E-46 |
| MS.gene054083 | MS.gene34085 | 0.818274 | 2.14E-52 | -1.69E-46 |
| MS.gene05414 | MS.gene34085 | 0.801893 | 7.26E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene34085 | 0.827682 | 1.37E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene34085 | 0.837081 | 6.41E-57 | -1.69E-46 |
| MS.gene054468 | MS.gene34085 | 0.81088 | 9.25E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene34085 | 0.816693 | 4.85E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene34085 | 0.870417 | 1.48E-66 | -1.69E-46 |
| MS.gene054942 | MS.gene34085 | 0.838628 | 2.57E-57 | -1.69E-46 |
| MS.gene055778 | MS.gene34085 | 0.810272 | 1.25E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene34085 | 0.82649 | 2.64E-54 | -1.69E-46 |
| MS.gene056069 | MS.gene34085 | -0.81161 | 6.42E-51 | -1.69E-46 |
| MS.gene056498 | MS.gene34085 | 0.802507 | 5.43E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene34085 | 0.824604 | 7.38E-54 | -1.69E-46 |
| MS.gene056760 | MS.gene34085 | 0.812719 | 3.68E-51 | -1.69E-46 |
| MS.gene056873 | MS.gene34085 | 0.801275 | 9.72E-49 | -1.69E-46 |
| MS.gene056875 | MS.gene34085 | 0.842008 | 3.36E-58 | -1.69E-46 |
| MS.gene056979 | MS.gene34085 | 0.80827 | 3.36E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene34085 | 0.806518 | 7.91E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene34085 | 0.811352 | 7.31E-51 | -1.69E-46 |
| MS.gene057079 | MS.gene34085 | 0.821654 | 3.60E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene34085 | 0.806306 | 8.77E-50 | -1.69E-46 |
| MS.gene057194 | MS.gene34085 | 0.807437 | 5.06E-50 | -1.69E-46 |
| MS.gene057200 | MS.gene34085 | 0.807194 | 5.69E-50 | -1.69E-46 |
| MS.gene057260 | MS.gene34085 | 0.854747 | 1.00E-61 | -1.69E-46 |
| MS.gene057414 | MS.gene34085 | 0.818164 | 2.26E-52 | -1.69E-46 |
| MS.gene057555 | MS.gene34085 | 0.80643 | 8.26E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene34085 | 0.806739 | 7.11E-50 | -1.69E-46 |
| MS.gene057750 | MS.gene34085 | 0.816733 | 4.75E-52 | -1.69E-46 |
| MS.gene05795 | MS.gene34085 | 0.814507 | 1.49E-51 | -1.69E-46 |
| MS.gene057967 | MS.gene34085 | 0.862689 | 4.24E-64 | -1.69E-46 |
| MS.gene058084 | MS.gene34085 | 0.806489 | 8.03E-50 | -1.69E-46 |
| MS.gene058139 | MS.gene34085 | 0.821691 | 3.53E-53 | -1.69E-46 |
| MS.gene058146 | MS.gene34085 | 0.811233 | 7.76E-51 | -1.69E-46 |
| MS.gene058182 | MS.gene34085 | 0.808721 | 2.70E-50 | -1.69E-46 |
| MS.gene058200 | MS.gene34085 | 0.815043 | 1.13E-51 | -1.69E-46 |
| MS.gene058399 | MS.gene34085 | 0.821067 | 4.92E-53 | -1.69E-46 |
| MS.gene058636 | MS.gene34085 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene058710 | MS.gene34085 | 0.805833 | 1.10E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene34085 | 0.834984 | 2.18E-56 | -1.69E-46 |
| MS.gene058906 | MS.gene34085 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene059220 | MS.gene34085 | 0.805524 | 1.28E-49 | -1.69E-46 |
| MS.gene059249 | MS.gene34085 | 0.815234 | 1.03E-51 | -1.69E-46 |
| MS.gene060297 | MS.gene34085 | 0.811452 | 6.95E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene34085 | 0.83029 | 3.19E-55 | -1.69E-46 |
| MS.gene060619 | MS.gene34085 | 0.82174 | 3.44E-53 | -1.69E-46 |
| MS.gene060634 | MS.gene34085 | -0.805153 | 1.53E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene34085 | 0.838671 | 2.50E-57 | -1.69E-46 |
| MS.gene060685 | MS.gene34085 | 0.82823 | 1.01E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene34085 | 0.808133 | 3.60E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene34085 | -0.846975 | 1.55E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34085.t1 | MTR_1g094180 | 95.578 | 294 | 13 | 0 | 1 | 294 | 1 | 294 | 0.0 | 582 |
| MS.gene34085.t1 | MTR_1g094180 | 95.578 | 294 | 13 | 0 | 1 | 294 | 5 | 298 | 0.0 | 582 |
| MS.gene34085.t1 | MTR_1g050538 | 60.241 | 249 | 93 | 3 | 1 | 248 | 1 | 244 | 1.40e-101 | 297 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34085.t1 | AT2G39170 | 42.231 | 251 | 105 | 4 | 1 | 248 | 1 | 214 | 1.07e-50 | 167 |
Find 48 sgRNAs with CRISPR-Local
Find 66 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTTTCTGTCTGAGAATT+TGG | 0.214548 | 1.2:+74384259 | None:intergenic |
| CATGAATTCTCTACCGTTGA+TGG | 0.268118 | 1.2:-74384601 | MS.gene34085:CDS |
| CGGCATAACTTCATCATTAC+AGG | 0.308986 | 1.2:-74384041 | MS.gene34085:CDS |
| ACCTATCATCTCATTGACTA+TGG | 0.347470 | 1.2:+74384357 | None:intergenic |
| AATGCTGATATCACTTTCAT+TGG | 0.349970 | 1.2:+74383955 | None:intergenic |
| TTGTCAGCTTTAATGACATT+TGG | 0.384892 | 1.2:+74384475 | None:intergenic |
| TCTTCAACCTGACTCGATAT+AGG | 0.401910 | 1.2:+74383998 | None:intergenic |
| AACGAGGAGAAGATAAATAC+TGG | 0.403101 | 1.2:-74383614 | MS.gene34085:CDS |
| GTGATTGACCGTGGCAAATC+AGG | 0.414138 | 1.2:+74384070 | None:intergenic |
| TCCATAGTCAATGAGATGAT+AGG | 0.429467 | 1.2:-74384358 | MS.gene34085:CDS |
| AAGATAAATACTGGAAATAG+TGG | 0.432837 | 1.2:-74383605 | MS.gene34085:CDS |
| AACTTTGCACACTGAAGACT+TGG | 0.451922 | 1.2:-74384425 | MS.gene34085:CDS |
| TTGGTGTTGATGTTGATGAA+TGG | 0.456620 | 1.2:+74384278 | None:intergenic |
| AGGTGACATAAACAAATCTC+TGG | 0.458453 | 1.2:-74384338 | MS.gene34085:CDS |
| AAACTAGAGGAGTGGCTTGA+AGG | 0.458965 | 1.2:-74383878 | MS.gene34085:CDS |
| AGTTGTTGTCATTGTCAGAA+AGG | 0.459938 | 1.2:-74383931 | MS.gene34085:CDS |
| TGATTTGCCTATATCGAGTC+AGG | 0.466514 | 1.2:-74384005 | MS.gene34085:CDS |
| ATATCGTAGCTTCTCTTCGT+TGG | 0.471398 | 1.2:+74384093 | None:intergenic |
| CTCGATATAGGCAAATCATC+AGG | 0.503555 | 1.2:+74384010 | None:intergenic |
| TTTGCACACTGAAGACTTGG+AGG | 0.512330 | 1.2:-74384422 | MS.gene34085:CDS |
| TCTACTGATCCTTTACCATC+AGG | 0.516231 | 1.2:+74384118 | None:intergenic |
| GTTGATGTTGATGAATGGAT+TGG | 0.527813 | 1.2:+74384283 | None:intergenic |
| TGGCAACAGCCTGATGGTAA+AGG | 0.529712 | 1.2:-74384127 | MS.gene34085:CDS |
| CGTGGCTAACGAACCATCTG+TGG | 0.531543 | 1.2:-74384536 | MS.gene34085:CDS |
| TATAGGCAAATCATCAGGTT+CGG | 0.532495 | 1.2:+74384015 | None:intergenic |
| ACATTCTTTCATTGATCGAA+CGG | 0.535936 | 1.2:+74384387 | None:intergenic |
| ACTGGAAATAGTGGATTCAA+AGG | 0.551817 | 1.2:-74383596 | MS.gene34085:CDS |
| GTTCGATCAATGAAAGAATG+TGG | 0.571899 | 1.2:-74384385 | MS.gene34085:CDS |
| TTTAAAGTCGGCGAAACAGA+AGG | 0.572954 | 1.2:-74384164 | MS.gene34085:CDS |
| GTGGCTAACGAACCATCTGT+GGG | 0.577979 | 1.2:-74384535 | MS.gene34085:CDS |
| TTCAAGTGGCAACAGCCTGA+TGG | 0.588182 | 1.2:-74384133 | MS.gene34085:CDS |
| TACGATATCCTGATTTGCCA+CGG | 0.614233 | 1.2:-74384078 | MS.gene34085:CDS |
| TAAGAAGCTTCTCGAGAACG+AGG | 0.616733 | 1.2:-74383630 | MS.gene34085:CDS |
| CCACGGTCAATCACATCAGA+CGG | 0.616977 | 1.2:-74384061 | MS.gene34085:CDS |
| TATCTCCACAAAACCATCAA+CGG | 0.623173 | 1.2:+74384588 | None:intergenic |
| AGAAGGTTAACAGTTTCAAG+TGG | 0.626891 | 1.2:-74384147 | MS.gene34085:CDS |
| TAATAAAGAAGCTAAACTAG+AGG | 0.628039 | 1.2:-74383891 | MS.gene34085:CDS |
| TGTGGAGATAAGTGAATGCA+TGG | 0.634348 | 1.2:-74384575 | MS.gene34085:CDS |
| CCGTGATGATTATTGCGACA+CGG | 0.638583 | 1.2:-74383846 | MS.gene34085:CDS |
| ATAAAGTAAAGCCCCACAGA+TGG | 0.642500 | 1.2:+74384523 | None:intergenic |
| GACACGGATGAAGAAGAAAG+AGG | 0.646339 | 1.2:-74383830 | MS.gene34085:intron |
| AAGAAGCTAAACTAGAGGAG+TGG | 0.653782 | 1.2:-74383886 | MS.gene34085:CDS |
| CCGTGTCGCAATAATCATCA+CGG | 0.657697 | 1.2:+74383846 | None:intergenic |
| GGCATAACTTCATCATTACA+GGG | 0.684347 | 1.2:-74384040 | MS.gene34085:CDS |
| CCGTCTGATGTGATTGACCG+TGG | 0.714657 | 1.2:+74384061 | None:intergenic |
| GGCGGATATGATCAAATACG+TGG | 0.717411 | 1.2:-74384554 | MS.gene34085:CDS |
| TGGCTAACGAACCATCTGTG+GGG | 0.751780 | 1.2:-74384534 | MS.gene34085:CDS |
| GGAGATAAGTGAATGCATGG+CGG | 0.818548 | 1.2:-74384572 | MS.gene34085:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAAAAACCAAAAAA+AGG | - | chr1.2:74383862-74383881 | MS.gene34085:CDS | 15.0% |
| !! | AAACAAAAAAACCAAAAAAA+GGG | - | chr1.2:74383863-74383882 | MS.gene34085:CDS | 15.0% |
| !!! | TTTTTCAAATGTTTTAAAGT+CGG | - | chr1.2:74383993-74384012 | MS.gene34085:CDS | 15.0% |
| ! | AAGATAAATACTGGAAATAG+TGG | - | chr1.2:74384564-74384583 | MS.gene34085:CDS | 25.0% |
| ! | TAATAAAGAAGCTAAACTAG+AGG | - | chr1.2:74384278-74384297 | MS.gene34085:CDS | 25.0% |
| ! | TGACAAAAATATTGTCGAAA+AGG | - | chr1.2:74383711-74383730 | MS.gene34085:intron | 25.0% |
| AATGCTGATATCACTTTCAT+TGG | + | chr1.2:74384217-74384236 | None:intergenic | 30.0% | |
| ACATTCTTTCATTGATCGAA+CGG | + | chr1.2:74383785-74383804 | None:intergenic | 30.0% | |
| ! | TTGTCAGCTTTAATGACATT+TGG | + | chr1.2:74383697-74383716 | None:intergenic | 30.0% |
| AACGAGGAGAAGATAAATAC+TGG | - | chr1.2:74384555-74384574 | MS.gene34085:CDS | 35.0% | |
| AGAAGGTTAACAGTTTCAAG+TGG | - | chr1.2:74384022-74384041 | MS.gene34085:CDS | 35.0% | |
| AGGTGACATAAACAAATCTC+TGG | - | chr1.2:74383831-74383850 | MS.gene34085:CDS | 35.0% | |
| AGTTGTTGTCATTGTCAGAA+AGG | - | chr1.2:74384238-74384257 | MS.gene34085:CDS | 35.0% | |
| GAACAAACATGATACGCTAT+TGG | - | chr1.2:74384447-74384466 | MS.gene34085:CDS | 35.0% | |
| GAAGAAAGAGGTTAGTAGTT+TGG | - | chr1.2:74384351-74384370 | MS.gene34085:CDS | 35.0% | |
| GGCATAACTTCATCATTACA+GGG | - | chr1.2:74384129-74384148 | MS.gene34085:CDS | 35.0% | |
| GTTCGATCAATGAAAGAATG+TGG | - | chr1.2:74383784-74383803 | MS.gene34085:intron | 35.0% | |
| GTTCTTTCTGTCTGAGAATT+TGG | + | chr1.2:74383913-74383932 | None:intergenic | 35.0% | |
| TATAGGCAAATCATCAGGTT+CGG | + | chr1.2:74384157-74384176 | None:intergenic | 35.0% | |
| TATCTCCACAAAACCATCAA+CGG | + | chr1.2:74383584-74383603 | None:intergenic | 35.0% | |
| TCCATAGTCAATGAGATGAT+AGG | - | chr1.2:74383811-74383830 | MS.gene34085:intron | 35.0% | |
| ! | ACCTATCATCTCATTGACTA+TGG | + | chr1.2:74383815-74383834 | None:intergenic | 35.0% |
| ! | AGACAGAAAGAACTCGTTTT+TGG | - | chr1.2:74383920-74383939 | MS.gene34085:CDS | 35.0% |
| ! | GTTGATGTTGATGAATGGAT+TGG | + | chr1.2:74383889-74383908 | None:intergenic | 35.0% |
| ! | GTTGATTTCCTTATGTCAAC+AGG | - | chr1.2:74384516-74384535 | MS.gene34085:CDS | 35.0% |
| !! | ACAGAAAGAACTCGTTTTTG+GGG | - | chr1.2:74383922-74383941 | MS.gene34085:CDS | 35.0% |
| !! | ACTGGAAATAGTGGATTCAA+AGG | - | chr1.2:74384573-74384592 | MS.gene34085:CDS | 35.0% |
| !! | ATGCTTTTTATGCTCAGGAA+GGG | - | chr1.2:74383950-74383969 | MS.gene34085:CDS | 35.0% |
| !! | CAATCATGCTTTTTATGCTC+AGG | - | chr1.2:74383945-74383964 | MS.gene34085:CDS | 35.0% |
| !! | GACAGAAAGAACTCGTTTTT+GGG | - | chr1.2:74383921-74383940 | MS.gene34085:CDS | 35.0% |
| !! | TTGGTGTTGATGTTGATGAA+TGG | + | chr1.2:74383894-74383913 | None:intergenic | 35.0% |
| AACTTTGCACACTGAAGACT+TGG | - | chr1.2:74383744-74383763 | MS.gene34085:intron | 40.0% | |
| AAGAAGCTAAACTAGAGGAG+TGG | - | chr1.2:74384283-74384302 | MS.gene34085:CDS | 40.0% | |
| ATAAAGTAAAGCCCCACAGA+TGG | + | chr1.2:74383649-74383668 | None:intergenic | 40.0% | |
| ATATCGTAGCTTCTCTTCGT+TGG | + | chr1.2:74384079-74384098 | None:intergenic | 40.0% | |
| CATGAATTCTCTACCGTTGA+TGG | - | chr1.2:74383568-74383587 | MS.gene34085:CDS | 40.0% | |
| CGGCATAACTTCATCATTAC+AGG | - | chr1.2:74384128-74384147 | MS.gene34085:CDS | 40.0% | |
| CTCGATATAGGCAAATCATC+AGG | + | chr1.2:74384162-74384181 | None:intergenic | 40.0% | |
| GCTTCTTACCTGTTGACATA+AGG | + | chr1.2:74384527-74384546 | None:intergenic | 40.0% | |
| TCTACTGATCCTTTACCATC+AGG | + | chr1.2:74384054-74384073 | None:intergenic | 40.0% | |
| TGTGGAGATAAGTGAATGCA+TGG | - | chr1.2:74383594-74383613 | MS.gene34085:CDS | 40.0% | |
| ! | CTGCATTTTGAGCATGTTGT+TGG | + | chr1.2:74383672-74383691 | None:intergenic | 40.0% |
| ! | TACGATATCCTGATTTGCCA+CGG | - | chr1.2:74384091-74384110 | MS.gene34085:CDS | 40.0% |
| ! | TCTTCAACCTGACTCGATAT+AGG | + | chr1.2:74384174-74384193 | None:intergenic | 40.0% |
| ! | TGATTTGCCTATATCGAGTC+AGG | - | chr1.2:74384164-74384183 | MS.gene34085:CDS | 40.0% |
| ! | TTTAAAGTCGGCGAAACAGA+AGG | - | chr1.2:74384005-74384024 | MS.gene34085:CDS | 40.0% |
| !! | CATGCTTTTTATGCTCAGGA+AGG | - | chr1.2:74383949-74383968 | MS.gene34085:CDS | 40.0% |
| !! | TGCTTTTTATGCTCAGGAAG+GGG | - | chr1.2:74383951-74383970 | MS.gene34085:CDS | 40.0% |
| !!! | GAATGGATTGGCCCTTTTTT+TGG | + | chr1.2:74383877-74383896 | None:intergenic | 40.0% |
| AAACTAGAGGAGTGGCTTGA+AGG | - | chr1.2:74384291-74384310 | MS.gene34085:CDS | 45.0% | |
| CCGTGATGATTATTGCGACA+CGG | - | chr1.2:74384323-74384342 | MS.gene34085:CDS | 45.0% | |
| CCGTGTCGCAATAATCATCA+CGG | + | chr1.2:74384326-74384345 | None:intergenic | 45.0% | |
| GACACGGATGAAGAAGAAAG+AGG | - | chr1.2:74384339-74384358 | MS.gene34085:CDS | 45.0% | |
| GGAGATAAGTGAATGCATGG+CGG | - | chr1.2:74383597-74383616 | MS.gene34085:CDS | 45.0% | |
| GGCGGATATGATCAAATACG+TGG | - | chr1.2:74383615-74383634 | MS.gene34085:CDS | 45.0% | |
| TAAGAAGCTTCTCGAGAACG+AGG | - | chr1.2:74384539-74384558 | MS.gene34085:CDS | 45.0% | |
| TTTGCACACTGAAGACTTGG+AGG | - | chr1.2:74383747-74383766 | MS.gene34085:intron | 45.0% | |
| !!! | CTCTACCGTTGATGGTTTTG+TGG | - | chr1.2:74383576-74383595 | MS.gene34085:CDS | 45.0% |
| CCACGGTCAATCACATCAGA+CGG | - | chr1.2:74384108-74384127 | MS.gene34085:CDS | 50.0% | |
| GTGATTGACCGTGGCAAATC+AGG | + | chr1.2:74384102-74384121 | None:intergenic | 50.0% | |
| GTGGCTAACGAACCATCTGT+GGG | - | chr1.2:74383634-74383653 | MS.gene34085:CDS | 50.0% | |
| TGGCAACAGCCTGATGGTAA+AGG | - | chr1.2:74384042-74384061 | MS.gene34085:CDS | 50.0% | |
| TGGCTAACGAACCATCTGTG+GGG | - | chr1.2:74383635-74383654 | MS.gene34085:intron | 50.0% | |
| TTCAAGTGGCAACAGCCTGA+TGG | - | chr1.2:74384036-74384055 | MS.gene34085:CDS | 50.0% | |
| CCGTCTGATGTGATTGACCG+TGG | + | chr1.2:74384111-74384130 | None:intergenic | 55.0% | |
| CGTGGCTAACGAACCATCTG+TGG | - | chr1.2:74383633-74383652 | MS.gene34085:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 74383565 | 74384626 | 74383565 | ID=MS.gene34085 |
| chr1.2 | mRNA | 74383565 | 74384626 | 74383565 | ID=MS.gene34085.t1;Parent=MS.gene34085 |
| chr1.2 | exon | 74383831 | 74384626 | 74383831 | ID=MS.gene34085.t1.exon1;Parent=MS.gene34085.t1 |
| chr1.2 | CDS | 74383831 | 74384626 | 74383831 | ID=cds.MS.gene34085.t1;Parent=MS.gene34085.t1 |
| chr1.2 | exon | 74383565 | 74383653 | 74383565 | ID=MS.gene34085.t1.exon2;Parent=MS.gene34085.t1 |
| chr1.2 | CDS | 74383565 | 74383653 | 74383565 | ID=cds.MS.gene34085.t1;Parent=MS.gene34085.t1 |
| Gene Sequence |
| Protein sequence |
