Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49003.t1 | XP_013461420.1 | 96.9 | 358 | 11 | 0 | 12 | 369 | 44 | 401 | 5.90E-196 | 693.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49003.t1 | Q94A79 | 57.0 | 358 | 152 | 1 | 11 | 368 | 52 | 407 | 8.8e-116 | 418.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49003.t1 | A0A072VBA8 | 96.9 | 358 | 11 | 0 | 12 | 369 | 44 | 401 | 4.3e-196 | 693.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene49003 | 0.844169 | 8.93E-59 | -1.69E-46 |
| MS.gene049378 | MS.gene49003 | 0.817854 | 2.66E-52 | -1.69E-46 |
| MS.gene049435 | MS.gene49003 | 0.829106 | 6.20E-55 | -1.69E-46 |
| MS.gene049501 | MS.gene49003 | 0.80166 | 8.11E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene49003 | 0.821882 | 3.19E-53 | -1.69E-46 |
| MS.gene050020 | MS.gene49003 | 0.819387 | 1.19E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene49003 | 0.838917 | 2.16E-57 | -1.69E-46 |
| MS.gene050227 | MS.gene49003 | 0.839433 | 1.59E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene49003 | 0.840388 | 8.96E-58 | -1.69E-46 |
| MS.gene050438 | MS.gene49003 | 0.845638 | 3.58E-59 | -1.69E-46 |
| MS.gene050442 | MS.gene49003 | 0.859553 | 3.82E-63 | -1.69E-46 |
| MS.gene050558 | MS.gene49003 | 0.80778 | 4.28E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene49003 | -0.823146 | 1.62E-53 | -1.69E-46 |
| MS.gene050719 | MS.gene49003 | 0.87744 | 6.27E-69 | -1.69E-46 |
| MS.gene050721 | MS.gene49003 | 0.875932 | 2.09E-68 | -1.69E-46 |
| MS.gene050724 | MS.gene49003 | 0.868502 | 6.23E-66 | -1.69E-46 |
| MS.gene050780 | MS.gene49003 | 0.842495 | 2.50E-58 | -1.69E-46 |
| MS.gene050787 | MS.gene49003 | 0.811325 | 7.41E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene49003 | 0.804234 | 2.38E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene49003 | 0.80604 | 9.98E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene49003 | 0.825561 | 4.38E-54 | -1.69E-46 |
| MS.gene050844 | MS.gene49003 | 0.806353 | 8.57E-50 | -1.69E-46 |
| MS.gene050959 | MS.gene49003 | 0.816529 | 5.28E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene49003 | 0.834342 | 3.17E-56 | -1.69E-46 |
| MS.gene051265 | MS.gene49003 | 0.834116 | 3.61E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene49003 | 0.805975 | 1.03E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene49003 | 0.814838 | 1.26E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene49003 | 0.870801 | 1.11E-66 | -1.69E-46 |
| MS.gene052208 | MS.gene49003 | 0.800539 | 1.37E-48 | -1.69E-46 |
| MS.gene052323 | MS.gene49003 | 0.844542 | 7.09E-59 | -1.69E-46 |
| MS.gene052611 | MS.gene49003 | 0.820478 | 6.72E-53 | -1.69E-46 |
| MS.gene052613 | MS.gene49003 | 0.818684 | 1.72E-52 | -1.69E-46 |
| MS.gene052665 | MS.gene49003 | 0.81968 | 1.02E-52 | -1.69E-46 |
| MS.gene052856 | MS.gene49003 | 0.812645 | 3.82E-51 | -1.69E-46 |
| MS.gene052858 | MS.gene49003 | 0.803756 | 3.00E-49 | -1.69E-46 |
| MS.gene052860 | MS.gene49003 | 0.814118 | 1.81E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene49003 | 0.822158 | 2.75E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene49003 | 0.851487 | 8.59E-61 | -1.69E-46 |
| MS.gene053008 | MS.gene49003 | 0.82528 | 5.11E-54 | -1.69E-46 |
| MS.gene053074 | MS.gene49003 | 0.801927 | 7.15E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene49003 | 0.802832 | 4.65E-49 | -1.69E-46 |
| MS.gene053221 | MS.gene49003 | 0.825025 | 5.87E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene49003 | 0.803803 | 2.93E-49 | -1.69E-46 |
| MS.gene053630 | MS.gene49003 | 0.806314 | 8.74E-50 | -1.69E-46 |
| MS.gene053811 | MS.gene49003 | 0.813459 | 2.53E-51 | -1.69E-46 |
| MS.gene053966 | MS.gene49003 | 0.802939 | 4.42E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene49003 | 0.821632 | 3.64E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene49003 | 0.837149 | 6.16E-57 | -1.69E-46 |
| MS.gene054185 | MS.gene49003 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene49003 | 0.812434 | 4.25E-51 | -1.69E-46 |
| MS.gene054291 | MS.gene49003 | -0.804937 | 1.70E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene49003 | 0.842037 | 3.30E-58 | -1.69E-46 |
| MS.gene054468 | MS.gene49003 | 0.827389 | 1.61E-54 | -1.69E-46 |
| MS.gene054472 | MS.gene49003 | 0.810306 | 1.23E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene49003 | 0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene05462 | MS.gene49003 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene05468 | MS.gene49003 | 0.811627 | 6.37E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene49003 | 0.800888 | 1.17E-48 | -1.69E-46 |
| MS.gene054942 | MS.gene49003 | 0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene05510 | MS.gene49003 | 0.815196 | 1.05E-51 | -1.69E-46 |
| MS.gene055222 | MS.gene49003 | 0.802767 | 4.80E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene49003 | 0.803514 | 3.36E-49 | -1.69E-46 |
| MS.gene055357 | MS.gene49003 | 0.80381 | 2.92E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene49003 | 0.805285 | 1.44E-49 | -1.69E-46 |
| MS.gene055363 | MS.gene49003 | 0.812407 | 4.31E-51 | -1.69E-46 |
| MS.gene055608 | MS.gene49003 | 0.802143 | 6.45E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene49003 | 0.818209 | 2.21E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene49003 | 0.849237 | 3.68E-60 | -1.69E-46 |
| MS.gene055926 | MS.gene49003 | 0.804621 | 1.98E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene49003 | 0.821044 | 4.98E-53 | -1.69E-46 |
| MS.gene056173 | MS.gene49003 | 0.819241 | 1.29E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene49003 | 0.801613 | 8.29E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene49003 | 0.821557 | 3.79E-53 | -1.69E-46 |
| MS.gene056760 | MS.gene49003 | 0.807162 | 5.78E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene49003 | 0.817339 | 3.47E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene49003 | 0.805008 | 1.64E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene49003 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene057750 | MS.gene49003 | 0.811902 | 5.55E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene49003 | 0.833318 | 5.71E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene49003 | 0.872537 | 2.95E-67 | -1.69E-46 |
| MS.gene057967 | MS.gene49003 | 0.802611 | 5.17E-49 | -1.69E-46 |
| MS.gene057980 | MS.gene49003 | 0.818575 | 1.82E-52 | -1.69E-46 |
| MS.gene058084 | MS.gene49003 | 0.80829 | 3.33E-50 | -1.69E-46 |
| MS.gene058139 | MS.gene49003 | 0.801431 | 9.04E-49 | -1.69E-46 |
| MS.gene058146 | MS.gene49003 | 0.800844 | 1.19E-48 | -1.69E-46 |
| MS.gene058168 | MS.gene49003 | 0.83732 | 5.57E-57 | -1.69E-46 |
| MS.gene058399 | MS.gene49003 | 0.809822 | 1.56E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene49003 | 0.811415 | 7.08E-51 | -1.69E-46 |
| MS.gene058636 | MS.gene49003 | 0.825135 | 5.53E-54 | -1.69E-46 |
| MS.gene058792 | MS.gene49003 | 0.800753 | 1.24E-48 | -1.69E-46 |
| MS.gene058829 | MS.gene49003 | 0.80624 | 9.05E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene49003 | 0.813632 | 2.32E-51 | -1.69E-46 |
| MS.gene059124 | MS.gene49003 | 0.818783 | 1.64E-52 | -1.69E-46 |
| MS.gene059128 | MS.gene49003 | 0.811429 | 7.03E-51 | -1.69E-46 |
| MS.gene059220 | MS.gene49003 | 0.806631 | 7.49E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene49003 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene49003 | 0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene059725 | MS.gene49003 | 0.814969 | 1.18E-51 | -1.69E-46 |
| MS.gene059789 | MS.gene49003 | 0.801647 | 8.16E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene49003 | 0.802462 | 5.55E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene49003 | 0.806045 | 9.95E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene49003 | 0.830659 | 2.59E-55 | -1.69E-46 |
| MS.gene06052 | MS.gene49003 | 0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene060572 | MS.gene49003 | 0.820688 | 6.01E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene49003 | 0.822823 | 1.93E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene49003 | 0.823644 | 1.24E-53 | -1.69E-46 |
| MS.gene060802 | MS.gene49003 | 0.807108 | 5.94E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene49003 | 0.862386 | 5.26E-64 | -1.69E-46 |
| MS.gene060998 | MS.gene49003 | 0.818689 | 1.72E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49003.t1 | MTR_3g491560 | 96.927 | 358 | 11 | 0 | 12 | 369 | 44 | 401 | 0.0 | 720 |
| MS.gene49003.t1 | MTR_7g117665 | 53.776 | 331 | 147 | 4 | 25 | 353 | 43 | 369 | 3.51e-124 | 363 |
| MS.gene49003.t1 | MTR_7g117665 | 51.304 | 345 | 148 | 5 | 25 | 353 | 43 | 383 | 2.81e-119 | 351 |
| MS.gene49003.t1 | MTR_1g007990 | 39.210 | 329 | 178 | 9 | 9 | 329 | 637 | 951 | 1.78e-62 | 216 |
| MS.gene49003.t1 | MTR_1g008050 | 45.494 | 233 | 118 | 5 | 69 | 300 | 1151 | 1375 | 2.63e-58 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49003.t1 | AT3G49250 | 56.983 | 358 | 152 | 1 | 11 | 368 | 52 | 407 | 4.78e-142 | 410 |
| MS.gene49003.t1 | AT5G24280 | 40.637 | 251 | 132 | 5 | 73 | 316 | 1279 | 1519 | 4.13e-45 | 166 |
| MS.gene49003.t1 | AT5G24280 | 40.637 | 251 | 132 | 5 | 73 | 316 | 1279 | 1519 | 4.13e-45 | 166 |
| MS.gene49003.t1 | AT5G24280 | 40.637 | 251 | 132 | 5 | 73 | 316 | 1311 | 1551 | 5.21e-45 | 166 |
| MS.gene49003.t1 | AT5G24275 | 34.034 | 238 | 128 | 4 | 30 | 265 | 220 | 430 | 2.26e-33 | 129 |
| MS.gene49003.t1 | AT5G24275 | 34.034 | 238 | 128 | 4 | 30 | 265 | 220 | 430 | 2.26e-33 | 129 |
| MS.gene49003.t1 | AT5G24275 | 34.034 | 238 | 128 | 4 | 30 | 265 | 392 | 602 | 1.44e-32 | 129 |
| MS.gene49003.t1 | AT5G24275 | 34.454 | 238 | 127 | 4 | 30 | 265 | 597 | 807 | 2.27e-32 | 129 |
Find 83 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCGACTTTCTTAAGTATT+TGG | 0.163897 | 3.2:+83195308 | MS.gene49003:CDS |
| GAGTGTCCGGCTGGATTTAT+TGG | 0.224477 | 3.2:+83194301 | MS.gene49003:CDS |
| TTCTTATTCATAGTTGCTAT+TGG | 0.233472 | 3.2:+83193492 | MS.gene49003:intron |
| CACTCCCCATTGGGCAATCT+TGG | 0.257269 | 3.2:-83194283 | None:intergenic |
| GAAGAATGGCGTCATCTAAT+TGG | 0.281502 | 3.2:-83192918 | None:intergenic |
| ACCTGGTTGTTGCTGTTACT+TGG | 0.305120 | 3.2:-83191486 | None:intergenic |
| GATGGAGCTCTTTCTTTAGA+TGG | 0.317587 | 3.2:+83194481 | MS.gene49003:CDS |
| AGTGTCCGGCTGGATTTATT+GGG | 0.317673 | 3.2:+83194302 | MS.gene49003:CDS |
| TGTCTAACGCCAAGTGGTTA+TGG | 0.330066 | 3.2:+83194367 | MS.gene49003:CDS |
| CTTTAGATGGAGGAATGATT+AGG | 0.334200 | 3.2:+83194494 | MS.gene49003:CDS |
| TCTTATTCATAGTTGCTATT+GGG | 0.337983 | 3.2:+83193493 | MS.gene49003:intron |
| TGCCTCTATTGGAAGGCCTT+TGG | 0.344800 | 3.2:+83194078 | MS.gene49003:CDS |
| CTGTTACTTGGTGGTGGAAC+TGG | 0.350725 | 3.2:-83191474 | None:intergenic |
| AACTTTGTCCTTCTTCCATT+GGG | 0.387772 | 3.2:-83195220 | None:intergenic |
| ATCGTCCGCATTACCAATCT+TGG | 0.394765 | 3.2:-83193538 | None:intergenic |
| TGATATGTCTTGAATCTCTA+AGG | 0.396970 | 3.2:+83194116 | MS.gene49003:CDS |
| AGCTCTTGAATTGTATGATA+AGG | 0.402676 | 3.2:+83194015 | MS.gene49003:CDS |
| AAACTTTGTCCTTCTTCCAT+TGG | 0.407671 | 3.2:-83195221 | None:intergenic |
| TAAATCCAAGATTGCCCAAT+GGG | 0.422999 | 3.2:+83194278 | MS.gene49003:CDS |
| AATAAAAGCTGTGGCCTTCA+CGG | 0.424469 | 3.2:+83194049 | MS.gene49003:CDS |
| CACGGGCTAGGTGCCTCTAT+TGG | 0.437611 | 3.2:+83194067 | MS.gene49003:CDS |
| GCGTTAGACAAAATAGGTTC+CGG | 0.439400 | 3.2:-83194354 | None:intergenic |
| ATTGTTTGTAGAACTTATGA+AGG | 0.448075 | 3.2:+83193986 | MS.gene49003:CDS |
| CTCCATGATGAGTCTTCACC+TGG | 0.448193 | 3.2:-83193635 | None:intergenic |
| CACTTGGCGTTAGACAAAAT+AGG | 0.453101 | 3.2:-83194360 | None:intergenic |
| ATTGCCCAATGGGGAGTGTC+CGG | 0.453427 | 3.2:+83194288 | MS.gene49003:CDS |
| TTTACCTTGCAAATGAAGAA+TGG | 0.453864 | 3.2:-83192932 | None:intergenic |
| CAAGATGATCTACGCTCGCT+TGG | 0.455710 | 3.2:+83192841 | MS.gene49003:CDS |
| CCCAATGGGGAGTGTCCGGC+TGG | 0.461596 | 3.2:+83194292 | MS.gene49003:CDS |
| TGCTGCTGGTATTCTGTGCC+AGG | 0.462317 | 3.2:+83193617 | MS.gene49003:CDS |
| GCTTGATCAGCACATTGAAA+TGG | 0.465601 | 3.2:+83195179 | MS.gene49003:CDS |
| GTTGGTGTTGTTGCTATGCT+AGG | 0.470088 | 3.2:+83193693 | MS.gene49003:CDS |
| ATCCAAAGGCCTTCCAATAG+AGG | 0.471825 | 3.2:-83194080 | None:intergenic |
| TCTTCAAGTACAACCAAGAT+TGG | 0.476782 | 3.2:+83193525 | MS.gene49003:CDS |
| TTGTTGCTGTTACTTGGTGG+TGG | 0.478759 | 3.2:-83191480 | None:intergenic |
| ATAAAAGCTGTGGCCTTCAC+GGG | 0.484744 | 3.2:+83194050 | MS.gene49003:CDS |
| ACCACATATTTACCAGCATA+AGG | 0.498675 | 3.2:-83194226 | None:intergenic |
| TGATGACTCACAACGAAAGT+TGG | 0.501223 | 3.2:+83194249 | MS.gene49003:CDS |
| CCAGCCGGACACTCCCCATT+GGG | 0.503345 | 3.2:-83194292 | None:intergenic |
| AAGATGATCTACGCTCGCTT+GGG | 0.508629 | 3.2:+83192842 | MS.gene49003:CDS |
| TCCAGCCGGACACTCCCCAT+TGG | 0.514253 | 3.2:-83194293 | None:intergenic |
| TGGTTGTTGCTGTTACTTGG+TGG | 0.515289 | 3.2:-83191483 | None:intergenic |
| GCACTAACACAGGATGTTGT+TGG | 0.516879 | 3.2:+83193675 | MS.gene49003:CDS |
| AGCTGTGGCCTTCACGGGCT+AGG | 0.525342 | 3.2:+83194055 | MS.gene49003:CDS |
| ATATGATTAATATAGACAAC+CGG | 0.533417 | 3.2:+83194335 | MS.gene49003:CDS |
| GATGAATACCCAATGGAAGA+AGG | 0.538167 | 3.2:+83195212 | MS.gene49003:CDS |
| TCTATTGGAAGGCCTTTGGA+TGG | 0.556581 | 3.2:+83194082 | MS.gene49003:CDS |
| GACGCCATTCTTCATTTGCA+AGG | 0.557760 | 3.2:+83192928 | MS.gene49003:CDS |
| TTGAGGATGACAATCTTAGC+AGG | 0.559697 | 3.2:+83193721 | MS.gene49003:CDS |
| GCCTTATGCTGGTAAATATG+TGG | 0.560207 | 3.2:+83194225 | MS.gene49003:CDS |
| CCTCCTCCTCAGTTGTAATG+TGG | 0.565780 | 3.2:-83193563 | None:intergenic |
| GAAGACTCATCATGGAGCAC+AGG | 0.568029 | 3.2:+83193641 | MS.gene49003:CDS |
| TGCCAGGTGAAGACTCATCA+TGG | 0.570153 | 3.2:+83193633 | MS.gene49003:CDS |
| CCACATTACAACTGAGGAGG+AGG | 0.570572 | 3.2:+83193563 | MS.gene49003:CDS |
| GGCTAGGTGCCTCTATTGGA+AGG | 0.572742 | 3.2:+83194071 | MS.gene49003:CDS |
| GGAGCTCTTTCTTTAGATGG+AGG | 0.577727 | 3.2:+83194484 | MS.gene49003:CDS |
| ATCAGCACATTGAAATGGAA+AGG | 0.577874 | 3.2:+83195184 | MS.gene49003:CDS |
| TCTCTGAGGCCATAACCACT+TGG | 0.580160 | 3.2:-83194376 | None:intergenic |
| GCACTTCCTTGCATAAGTGA+TGG | 0.582385 | 3.2:+83194463 | MS.gene49003:CDS |
| TTCTCTTCTTGCACTAACAC+AGG | 0.587839 | 3.2:+83193665 | MS.gene49003:CDS |
| CTTGAATTGTATGATAAGGA+AGG | 0.590543 | 3.2:+83194019 | MS.gene49003:CDS |
| ATATTCTTACCTATTACCCA+AGG | 0.591348 | 3.2:-83194533 | None:intergenic |
| ACCAAGTAACAGCAACAACC+AGG | 0.593800 | 3.2:+83191485 | MS.gene49003:CDS |
| GGCAAATGATGAATACCCAA+TGG | 0.597389 | 3.2:+83195205 | MS.gene49003:CDS |
| TCTTGGAGTGGAGACTATGT+TGG | 0.599213 | 3.2:+83193961 | MS.gene49003:CDS |
| TTTCTCGGAGTATCTTGGAG+TGG | 0.601969 | 3.2:+83193949 | MS.gene49003:CDS |
| AGAAAAGACAATGTTGGACA+TGG | 0.620991 | 3.2:+83195260 | MS.gene49003:CDS |
| TACAACCAAGATTGGTAATG+CGG | 0.624832 | 3.2:+83193533 | MS.gene49003:CDS |
| GCAAACCCAATAAATCCAGC+CGG | 0.628940 | 3.2:-83194307 | None:intergenic |
| GTCTACAAGTATACAAGACA+AGG | 0.633194 | 3.2:+83194425 | MS.gene49003:CDS |
| TAGAGGCACCTAGCCCGTGA+AGG | 0.634434 | 3.2:-83194063 | None:intergenic |
| GGAGGAATGATTAGGAGTTG+TGG | 0.637606 | 3.2:+83194502 | MS.gene49003:CDS |
| AGAGCTCCATCACTTATGCA+AGG | 0.645316 | 3.2:-83194469 | None:intergenic |
| ACTAGAAATCGACCATCCAA+AGG | 0.646590 | 3.2:-83194094 | None:intergenic |
| GGCAGCATAAATAAAAGCTG+TGG | 0.651617 | 3.2:+83194040 | MS.gene49003:CDS |
| TGCTATGCTAGGAAAAGTTG+AGG | 0.657021 | 3.2:+83193704 | MS.gene49003:CDS |
| TTAAATCCAAGATTGCCCAA+TGG | 0.666860 | 3.2:+83194277 | MS.gene49003:CDS |
| TCTCCACATTACAACTGAGG+AGG | 0.672917 | 3.2:+83193560 | MS.gene49003:CDS |
| GATGAAAATTAAGCAGCATG+AGG | 0.674683 | 3.2:+83192864 | MS.gene49003:CDS |
| CGATCTCCACATTACAACTG+AGG | 0.681013 | 3.2:+83193557 | MS.gene49003:CDS |
| TATAAAACAGAGTTTCTCTG+AGG | 0.681314 | 3.2:-83194390 | None:intergenic |
| AAATCCAAGATTGCCCAATG+GGG | 0.722987 | 3.2:+83194279 | MS.gene49003:CDS |
| TCTACAAGTATACAAGACAA+GGG | 0.738588 | 3.2:+83194426 | MS.gene49003:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTAAAAGATTAAAATAAT+TGG | - | chr3.2:83194824-83194843 | None:intergenic | 10.0% |
| !! | TGAAATAAAAAAAAAAATGT+AGG | - | chr3.2:83191763-83191782 | None:intergenic | 10.0% |
| !! | AGTTTCTTCAAATATTATTT+AGG | - | chr3.2:83192820-83192839 | None:intergenic | 15.0% |
| !!! | TCTGAAATAAAATATTTTGT+AGG | + | chr3.2:83194937-83194956 | MS.gene49003:intron | 15.0% |
| !!! | TGTATAGATTATTTTCTTTT+TGG | + | chr3.2:83193751-83193770 | MS.gene49003:intron | 15.0% |
| !! | AAAAAAATGTAGGTTATATG+AGG | - | chr3.2:83191753-83191772 | None:intergenic | 20.0% |
| !! | AAAAAGAAATAGTGAAATGA+AGG | + | chr3.2:83192285-83192304 | MS.gene49003:intron | 20.0% |
| !! | AAAATTAGTGAAGAAAAACT+CGG | - | chr3.2:83191599-83191618 | None:intergenic | 20.0% |
| !! | ACACATGAAAAATAATTACT+AGG | - | chr3.2:83192458-83192477 | None:intergenic | 20.0% |
| !! | ATATGATTAATATAGACAAC+CGG | + | chr3.2:83194335-83194354 | MS.gene49003:CDS | 20.0% |
| !! | GTTACAATTATTATTCATTG+AGG | - | chr3.2:83194916-83194935 | None:intergenic | 20.0% |
| !! | TCAAACTTACATAATTCATA+TGG | - | chr3.2:83194874-83194893 | None:intergenic | 20.0% |
| !! | TTCTTCAAATATTATTTAGG+TGG | - | chr3.2:83192817-83192836 | None:intergenic | 20.0% |
| !!! | ATGTTTTTGTCTTTTATTTG+TGG | + | chr3.2:83194155-83194174 | MS.gene49003:intron | 20.0% |
| !!! | ATTTTCATTAATCTTTCAAG+TGG | + | chr3.2:83194738-83194757 | MS.gene49003:intron | 20.0% |
| !!! | TGAAGCTTATATTTTCTTAA+AGG | - | chr3.2:83195055-83195074 | None:intergenic | 20.0% |
| !!! | TTTTCTTCACTAATTTTTCT+GGG | + | chr3.2:83191602-83191621 | MS.gene49003:intron | 20.0% |
| !!! | TTTTGATTATGAAGTTTATG+CGG | + | chr3.2:83193132-83193151 | MS.gene49003:intron | 20.0% |
| !!! | TTTTTCTTCACTAATTTTTC+TGG | + | chr3.2:83191601-83191620 | MS.gene49003:intron | 20.0% |
| ! | AAAAAGAGAAAAGACAATGT+TGG | + | chr3.2:83195254-83195273 | MS.gene49003:CDS | 25.0% |
| ! | AAAATAAAGCAAACGATTAG+AGG | - | chr3.2:83191536-83191555 | None:intergenic | 25.0% |
| ! | AACACATAGAATCATACTAT+TGG | - | chr3.2:83192340-83192359 | None:intergenic | 25.0% |
| ! | AATCTCTTGAAATTATCAGT+CGG | + | chr3.2:83191630-83191649 | MS.gene49003:intron | 25.0% |
| ! | AGAAAGCTAGAAAAGATAAA+TGG | + | chr3.2:83194678-83194697 | MS.gene49003:intron | 25.0% |
| ! | ATAGCAACTATGAATAAGAA+AGG | - | chr3.2:83193492-83193511 | None:intergenic | 25.0% |
| ! | ATCCAGTCTTTAATTAAAGA+GGG | - | chr3.2:83192376-83192395 | None:intergenic | 25.0% |
| ! | ATTGTTTGTAGAACTTATGA+AGG | + | chr3.2:83193986-83194005 | MS.gene49003:CDS | 25.0% |
| ! | GAAAGCTAGAAAAGATAAAT+GGG | + | chr3.2:83194679-83194698 | MS.gene49003:intron | 25.0% |
| ! | GTTTGATATGTTGTACAAAA+TGG | + | chr3.2:83194888-83194907 | MS.gene49003:intron | 25.0% |
| ! | TAATATGTTTCCGTATGTAT+AGG | + | chr3.2:83193277-83193296 | MS.gene49003:intron | 25.0% |
| ! | TATCCAGTCTTTAATTAAAG+AGG | - | chr3.2:83192377-83192396 | None:intergenic | 25.0% |
| ! | TATCTTCTGATAATTATGAC+AGG | + | chr3.2:83194601-83194620 | MS.gene49003:intron | 25.0% |
| ! | TCTTTAATTAAAGAGGGATT+GGG | - | chr3.2:83192370-83192389 | None:intergenic | 25.0% |
| ! | TGAATAATTCTTACAAGACT+GGG | + | chr3.2:83193182-83193201 | MS.gene49003:intron | 25.0% |
| ! | TGGATAATGATCATTCATTT+GGG | + | chr3.2:83192391-83192410 | MS.gene49003:intron | 25.0% |
| ! | TGTAAACTGAAAAAACTGTT+GGG | + | chr3.2:83195103-83195122 | MS.gene49003:intron | 25.0% |
| ! | TTCCTTAAAAAAATGAAGAG+CGG | - | chr3.2:83193370-83193389 | None:intergenic | 25.0% |
| ! | TTCTTATTCATAGTTGCTAT+TGG | + | chr3.2:83193492-83193511 | MS.gene49003:intron | 25.0% |
| ! | TTGAATAATTCTTACAAGAC+TGG | + | chr3.2:83193181-83193200 | MS.gene49003:intron | 25.0% |
| ! | TTGTAAACTGAAAAAACTGT+TGG | + | chr3.2:83195102-83195121 | MS.gene49003:intron | 25.0% |
| ! | TTTCGAAAAATGTACACAAT+TGG | + | chr3.2:83192118-83192137 | MS.gene49003:intron | 25.0% |
| !! | CCCTTTGTGAAAATATTTTT+CGG | + | chr3.2:83192083-83192102 | MS.gene49003:intron | 25.0% |
| !! | CCGAAAAATATTTTCACAAA+GGG | - | chr3.2:83192086-83192105 | None:intergenic | 25.0% |
| !! | CGAAAAATATTTTCACAAAG+GGG | - | chr3.2:83192085-83192104 | None:intergenic | 25.0% |
| !! | GAAAAATATTTTCACAAAGG+GGG | - | chr3.2:83192084-83192103 | None:intergenic | 25.0% |
| !! | GCTCTTTTATGATAGAAATT+TGG | + | chr3.2:83191824-83191843 | MS.gene49003:intron | 25.0% |
| !! | TAATAGGTACTTTGTTTCTT+CGG | + | chr3.2:83193807-83193826 | MS.gene49003:intron | 25.0% |
| !! | TCTTATTCATAGTTGCTATT+GGG | + | chr3.2:83193493-83193512 | MS.gene49003:intron | 25.0% |
| !! | TTATTTCACAGTCTTGTAAT+AGG | + | chr3.2:83193791-83193810 | MS.gene49003:intron | 25.0% |
| !!! | ACTCGGTTGTATTTTAATTT+AGG | + | chr3.2:83191682-83191701 | MS.gene49003:intron | 25.0% |
| !!! | CTCGGTTGTATTTTAATTTA+GGG | + | chr3.2:83191683-83191702 | MS.gene49003:intron | 25.0% |
| !!! | CTTTTTTCCTGTTTTGTTTT+AGG | + | chr3.2:83194203-83194222 | MS.gene49003:intron | 25.0% |
| !!! | GAATAGCGATTTTAATTACT+CGG | + | chr3.2:83191665-83191684 | MS.gene49003:intron | 25.0% |
| !!! | TTTTTTTATTTCACTCGCAT+TGG | + | chr3.2:83191770-83191789 | MS.gene49003:intron | 25.0% |
| AAACCATGTCAAATTTCGAA+GGG | - | chr3.2:83192238-83192257 | None:intergenic | 30.0% | |
| AACATCAAATATAAGCAACC+TGG | - | chr3.2:83192672-83192691 | None:intergenic | 30.0% | |
| AAGGGAAAAGAAGAGAAATT+AGG | - | chr3.2:83192220-83192239 | None:intergenic | 30.0% | |
| AATAAGTCGAGTGAAACTAT+CGG | - | chr3.2:83193916-83193935 | None:intergenic | 30.0% | |
| ACAAAGGACAATGTGAAAAA+TGG | + | chr3.2:83192610-83192629 | MS.gene49003:intron | 30.0% | |
| ACATCAAATATAAGCAACCT+GGG | - | chr3.2:83192671-83192690 | None:intergenic | 30.0% | |
| AGCTCTTGAATTGTATGATA+AGG | + | chr3.2:83194015-83194034 | MS.gene49003:CDS | 30.0% | |
| ATAGTTTCACTCGACTTATT+TGG | + | chr3.2:83193916-83193935 | MS.gene49003:intron | 30.0% | |
| ATATTCTTACCTATTACCCA+AGG | - | chr3.2:83194536-83194555 | None:intergenic | 30.0% | |
| ATCCCTCTTTAATTAAAGAC+TGG | + | chr3.2:83192371-83192390 | MS.gene49003:intron | 30.0% | |
| ATTATTCAATCTCTTGCTGA+TGG | - | chr3.2:83193170-83193189 | None:intergenic | 30.0% | |
| ATTTCTCTATCAACAAACGT+AGG | + | chr3.2:83193419-83193438 | MS.gene49003:intron | 30.0% | |
| CTAGATTAACTACAGTTTAC+TGG | + | chr3.2:83194766-83194785 | MS.gene49003:intron | 30.0% | |
| CTCACAACGTGATAAAATTA+GGG | + | chr3.2:83191926-83191945 | MS.gene49003:intron | 30.0% | |
| CTGGATAATGATCATTCATT+TGG | + | chr3.2:83192390-83192409 | MS.gene49003:intron | 30.0% | |
| CTTGAATTGTATGATAAGGA+AGG | + | chr3.2:83194019-83194038 | MS.gene49003:CDS | 30.0% | |
| GAAATTTGACATGGTTTACA+TGG | + | chr3.2:83192241-83192260 | MS.gene49003:intron | 30.0% | |
| GGAATTGAATGAAAACTTCA+CGG | + | chr3.2:83192585-83192604 | MS.gene49003:intron | 30.0% | |
| GGATAATGATCATTCATTTG+GGG | + | chr3.2:83192392-83192411 | MS.gene49003:intron | 30.0% | |
| GTAAACTGAAAAAACTGTTG+GGG | + | chr3.2:83195104-83195123 | MS.gene49003:intron | 30.0% | |
| GTCTTTAATTAAAGAGGGAT+TGG | - | chr3.2:83192371-83192390 | None:intergenic | 30.0% | |
| TAAACCATGTCAAATTTCGA+AGG | - | chr3.2:83192239-83192258 | None:intergenic | 30.0% | |
| TATAAAACAGAGTTTCTCTG+AGG | - | chr3.2:83194393-83194412 | None:intergenic | 30.0% | |
| TCACAACGTGATAAAATTAG+GGG | + | chr3.2:83191927-83191946 | MS.gene49003:intron | 30.0% | |
| TCTACAAGTATACAAGACAA+GGG | + | chr3.2:83194426-83194445 | MS.gene49003:CDS | 30.0% | |
| TCTCACAACGTGATAAAATT+AGG | + | chr3.2:83191925-83191944 | MS.gene49003:intron | 30.0% | |
| TGATATGTCTTGAATCTCTA+AGG | + | chr3.2:83194116-83194135 | MS.gene49003:CDS | 30.0% | |
| TTAAGCTTTCTTGATTCTGA+AGG | + | chr3.2:83193073-83193092 | MS.gene49003:intron | 30.0% | |
| TTATTCAATCTCTTGCTGAT+GGG | - | chr3.2:83193169-83193188 | None:intergenic | 30.0% | |
| TTTACCTTGCAAATGAAGAA+TGG | - | chr3.2:83192935-83192954 | None:intergenic | 30.0% | |
| ! | AAGTTTTCATTCAATTCCAC+TGG | - | chr3.2:83192583-83192602 | None:intergenic | 30.0% |
| ! | GATGACTTTTCTTCTTTGTT+TGG | + | chr3.2:83192973-83192992 | MS.gene49003:intron | 30.0% |
| ! | GCCGAAAAATATTTTCACAA+AGG | - | chr3.2:83192087-83192106 | None:intergenic | 30.0% |
| !! | TTGTCTTTTATTTGTGGTTG+TGG | + | chr3.2:83194161-83194180 | MS.gene49003:intron | 30.0% |
| AAAAACTCGGTAAATCACGA+AGG | - | chr3.2:83191586-83191605 | None:intergenic | 35.0% | |
| AAACTTTGTCCTTCTTCCAT+TGG | - | chr3.2:83195224-83195243 | None:intergenic | 35.0% | |
| AACTTTGTCCTTCTTCCATT+GGG | - | chr3.2:83195223-83195242 | None:intergenic | 35.0% | |
| AATGATCATTCATTTGGGGA+TGG | + | chr3.2:83192396-83192415 | MS.gene49003:intron | 35.0% | |
| ACCACATATTTACCAGCATA+AGG | - | chr3.2:83194229-83194248 | None:intergenic | 35.0% | |
| AGAAAAGACAATGTTGGACA+TGG | + | chr3.2:83195260-83195279 | MS.gene49003:CDS | 35.0% | |
| AGGATATGGTTAGAGAACAT+TGG | - | chr3.2:83191566-83191585 | None:intergenic | 35.0% | |
| AGTTATTCTTGTGCAGCATT+TGG | + | chr3.2:83192513-83192532 | MS.gene49003:intron | 35.0% | |
| ATAAAGCAAACGATTAGAGG+AGG | - | chr3.2:83191533-83191552 | None:intergenic | 35.0% | |
| ATCAGCACATTGAAATGGAA+AGG | + | chr3.2:83195184-83195203 | MS.gene49003:CDS | 35.0% | |
| CATAAGGCCTAAAACAAAAC+AGG | - | chr3.2:83194213-83194232 | None:intergenic | 35.0% | |
| CTTTAGATGGAGGAATGATT+AGG | + | chr3.2:83194494-83194513 | MS.gene49003:CDS | 35.0% | |
| GAGCGACTTTCTTAAGTATT+TGG | + | chr3.2:83195308-83195327 | MS.gene49003:CDS | 35.0% | |
| GAGTTCATTCACTGAATCAA+TGG | + | chr3.2:83193049-83193068 | MS.gene49003:intron | 35.0% | |
| GATGAAAATTAAGCAGCATG+AGG | + | chr3.2:83192864-83192883 | MS.gene49003:CDS | 35.0% | |
| GTCTACAAGTATACAAGACA+AGG | + | chr3.2:83194425-83194444 | MS.gene49003:CDS | 35.0% | |
| GTGAATGAACTCTACAGAAT+CGG | - | chr3.2:83193041-83193060 | None:intergenic | 35.0% | |
| TAAAGCAAACGATTAGAGGA+GGG | - | chr3.2:83191532-83191551 | None:intergenic | 35.0% | |
| TAAATCCAAGATTGCCCAAT+GGG | + | chr3.2:83194278-83194297 | MS.gene49003:CDS | 35.0% | |
| TATCAGTCGGAGAATTGTTA+TGG | + | chr3.2:83191643-83191662 | MS.gene49003:intron | 35.0% | |
| TATTCAATCTCTTGCTGATG+GGG | - | chr3.2:83193168-83193187 | None:intergenic | 35.0% | |
| TCTTCAAGTACAACCAAGAT+TGG | + | chr3.2:83193525-83193544 | MS.gene49003:CDS | 35.0% | |
| TTAAATCCAAGATTGCCCAA+TGG | + | chr3.2:83194277-83194296 | MS.gene49003:CDS | 35.0% | |
| TTTAGTACGCATTAGAACTG+CGG | + | chr3.2:83191860-83191879 | MS.gene49003:intron | 35.0% | |
| TTTCCCTTCGAAATTTGACA+TGG | + | chr3.2:83192232-83192251 | MS.gene49003:intron | 35.0% | |
| ! | AGTTGTGGTGTATTTTCCTT+GGG | + | chr3.2:83194517-83194536 | MS.gene49003:CDS | 35.0% |
| ! | GTGTATTTTCCTTGGGTAAT+AGG | + | chr3.2:83194524-83194543 | MS.gene49003:CDS | 35.0% |
| !! | TACAACCAAGATTGGTAATG+CGG | + | chr3.2:83193533-83193552 | MS.gene49003:CDS | 35.0% |
| !! | TTTGGAATGCAGACTTTTCT+CGG | + | chr3.2:83193934-83193953 | MS.gene49003:intron | 35.0% |
| !!! | TGCCGCTCTTCATTTTTTTA+AGG | + | chr3.2:83193365-83193384 | MS.gene49003:intron | 35.0% |
| !!! | TTTTGTTTTAGGCCTTATGC+TGG | + | chr3.2:83194214-83194233 | MS.gene49003:intron | 35.0% |
| AAATCCAAGATTGCCCAATG+GGG | + | chr3.2:83194279-83194298 | MS.gene49003:CDS | 40.0% | |
| AATAAAAGCTGTGGCCTTCA+CGG | + | chr3.2:83194049-83194068 | MS.gene49003:CDS | 40.0% | |
| AATGCAGAGAGAAATTGACC+TGG | - | chr3.2:83191506-83191525 | None:intergenic | 40.0% | |
| AATGCCCCATCTAAAAACTC+TGG | - | chr3.2:83193255-83193274 | None:intergenic | 40.0% | |
| ACAAAGCCATTATCTGTCCA+AGG | + | chr3.2:83192541-83192560 | MS.gene49003:intron | 40.0% | |
| ACTAGAAATCGACCATCCAA+AGG | - | chr3.2:83194097-83194116 | None:intergenic | 40.0% | |
| ATGCCCCATCTAAAAACTCT+GGG | - | chr3.2:83193254-83193273 | None:intergenic | 40.0% | |
| ATTATCTGTCCAAGGGTCTT+CGG | + | chr3.2:83192549-83192568 | MS.gene49003:intron | 40.0% | |
| ATTCAATCTCTTGCTGATGG+GGG | - | chr3.2:83193167-83193186 | None:intergenic | 40.0% | |
| CAAAGCCATTATCTGTCCAA+GGG | + | chr3.2:83192542-83192561 | MS.gene49003:intron | 40.0% | |
| CAAGACTGTGAAATAAGTGC+AGG | - | chr3.2:83193787-83193806 | None:intergenic | 40.0% | |
| CACACAGATGTATGCATCTT+AGG | - | chr3.2:83192021-83192040 | None:intergenic | 40.0% | |
| CACTTGGCGTTAGACAAAAT+AGG | - | chr3.2:83194363-83194382 | None:intergenic | 40.0% | |
| CCAGACCAGAAAAAACATTG+GGG | + | chr3.2:83195157-83195176 | MS.gene49003:CDS | 40.0% | |
| CCCAGACCAGAAAAAACATT+GGG | + | chr3.2:83195156-83195175 | MS.gene49003:CDS | 40.0% | |
| CCGTATGTATAGGCTGAAAA+GGG | + | chr3.2:83193287-83193306 | MS.gene49003:intron | 40.0% | |
| GAACAATGCCATCCTAAACA+GGG | + | chr3.2:83194788-83194807 | MS.gene49003:intron | 40.0% | |
| GAAGAATGGCGTCATCTAAT+TGG | - | chr3.2:83192921-83192940 | None:intergenic | 40.0% | |
| GATGAATACCCAATGGAAGA+AGG | + | chr3.2:83195212-83195231 | MS.gene49003:CDS | 40.0% | |
| GATGGAGCTCTTTCTTTAGA+TGG | + | chr3.2:83194481-83194500 | MS.gene49003:CDS | 40.0% | |
| GCCTTATGCTGGTAAATATG+TGG | + | chr3.2:83194225-83194244 | MS.gene49003:CDS | 40.0% | |
| GCGTTAGACAAAATAGGTTC+CGG | - | chr3.2:83194357-83194376 | None:intergenic | 40.0% | |
| GCTTGATCAGCACATTGAAA+TGG | + | chr3.2:83195179-83195198 | MS.gene49003:CDS | 40.0% | |
| GGCAAATGATGAATACCCAA+TGG | + | chr3.2:83195205-83195224 | MS.gene49003:CDS | 40.0% | |
| GGCAGCATAAATAAAAGCTG+TGG | + | chr3.2:83194040-83194059 | MS.gene49003:CDS | 40.0% | |
| TCCGTATGTATAGGCTGAAA+AGG | + | chr3.2:83193286-83193305 | MS.gene49003:intron | 40.0% | |
| TCGGTAAATCACGAAGGATA+TGG | - | chr3.2:83191580-83191599 | None:intergenic | 40.0% | |
| TGAAAACTTCACGGACACAA+AGG | + | chr3.2:83192594-83192613 | MS.gene49003:intron | 40.0% | |
| TGATGACTCACAACGAAAGT+TGG | + | chr3.2:83194249-83194268 | MS.gene49003:CDS | 40.0% | |
| TGCTATGCTAGGAAAAGTTG+AGG | + | chr3.2:83193704-83193723 | MS.gene49003:CDS | 40.0% | |
| TTAGTACGCATTAGAACTGC+GGG | + | chr3.2:83191861-83191880 | MS.gene49003:intron | 40.0% | |
| TTCTCTTCTTGCACTAACAC+AGG | + | chr3.2:83193665-83193684 | MS.gene49003:CDS | 40.0% | |
| TTGAAAACTTTGCCCATCCT+GGG | + | chr3.2:83194624-83194643 | MS.gene49003:intron | 40.0% | |
| TTGAGGATGACAATCTTAGC+AGG | + | chr3.2:83193721-83193740 | MS.gene49003:CDS | 40.0% | |
| ! | CCCTTTTCAGCCTATACATA+CGG | - | chr3.2:83193290-83193309 | None:intergenic | 40.0% |
| ! | CTATTTTGTCTAACGCCAAG+TGG | + | chr3.2:83194361-83194380 | MS.gene49003:CDS | 40.0% |
| ! | GAGTTGTGGTGTATTTTCCT+TGG | + | chr3.2:83194516-83194535 | MS.gene49003:CDS | 40.0% |
| ! | GTTATTTCCTATCCCAGGAT+GGG | - | chr3.2:83194639-83194658 | None:intergenic | 40.0% |
| !! | AGACTTTTCTCGGAGTATCT+TGG | + | chr3.2:83193944-83193963 | MS.gene49003:intron | 40.0% |
| !! | CACATGTTATTTCCTATCCC+AGG | - | chr3.2:83194644-83194663 | None:intergenic | 40.0% |
| !! | CTGACCCAGAGTTTTTAGAT+GGG | + | chr3.2:83193247-83193266 | MS.gene49003:intron | 40.0% |
| !! | TGACCCAGAGTTTTTAGATG+GGG | + | chr3.2:83193248-83193267 | MS.gene49003:intron | 40.0% |
| !! | TGTTATTTCCTATCCCAGGA+TGG | - | chr3.2:83194640-83194659 | None:intergenic | 40.0% |
| !! | TTAGCTTTGGAGGTTGAGAT+TGG | + | chr3.2:83193224-83193243 | MS.gene49003:intron | 40.0% |
| !!! | CCAATGTTTTTTCTGGTCTG+GGG | - | chr3.2:83195158-83195177 | None:intergenic | 40.0% |
| !!! | CCCAATGTTTTTTCTGGTCT+GGG | - | chr3.2:83195159-83195178 | None:intergenic | 40.0% |
| !!! | TCAAGCCCCAATGTTTTTTC+TGG | - | chr3.2:83195165-83195184 | None:intergenic | 40.0% |
| AAAAAACTGTTGGGGTCTGC+AGG | + | chr3.2:83195112-83195131 | MS.gene49003:intron | 45.0% | |
| AAAAACTGTTGGGGTCTGCA+GGG | + | chr3.2:83195113-83195132 | MS.gene49003:intron | 45.0% | |
| AAGATGATCTACGCTCGCTT+GGG | + | chr3.2:83192842-83192861 | MS.gene49003:CDS | 45.0% | |
| ACCAAGTAACAGCAACAACC+AGG | + | chr3.2:83191485-83191504 | MS.gene49003:CDS | 45.0% | |
| ACCTCCAAAGCTAACTCAAG+CGG | - | chr3.2:83193218-83193237 | None:intergenic | 45.0% | |
| AGAGCTCCATCACTTATGCA+AGG | - | chr3.2:83194472-83194491 | None:intergenic | 45.0% | |
| AGTGTCCGGCTGGATTTATT+GGG | + | chr3.2:83194302-83194321 | MS.gene49003:CDS | 45.0% | |
| ATAAAAGCTGTGGCCTTCAC+GGG | + | chr3.2:83194050-83194069 | MS.gene49003:CDS | 45.0% | |
| ATCCAAAGGCCTTCCAATAG+AGG | - | chr3.2:83194083-83194102 | None:intergenic | 45.0% | |
| ATCGTCCGCATTACCAATCT+TGG | - | chr3.2:83193541-83193560 | None:intergenic | 45.0% | |
| CAGCATGAAAAATCTGCTGC+TGG | + | chr3.2:83193603-83193622 | MS.gene49003:CDS | 45.0% | |
| CCCCAGACCAGAAAAAACAT+TGG | + | chr3.2:83195155-83195174 | MS.gene49003:CDS | 45.0% | |
| CGATCTCCACATTACAACTG+AGG | + | chr3.2:83193557-83193576 | MS.gene49003:CDS | 45.0% | |
| GAAGACCCTTGGACAGATAA+TGG | - | chr3.2:83192550-83192569 | None:intergenic | 45.0% | |
| GAAGGCTGCACGAGTATTAT+CGG | + | chr3.2:83193091-83193110 | MS.gene49003:intron | 45.0% | |
| GACGCCATTCTTCATTTGCA+AGG | + | chr3.2:83192928-83192947 | MS.gene49003:CDS | 45.0% | |
| GCAAACCCAATAAATCCAGC+CGG | - | chr3.2:83194310-83194329 | None:intergenic | 45.0% | |
| GCACTAACACAGGATGTTGT+TGG | + | chr3.2:83193675-83193694 | MS.gene49003:CDS | 45.0% | |
| GCACTTCCTTGCATAAGTGA+TGG | + | chr3.2:83194463-83194482 | MS.gene49003:CDS | 45.0% | |
| GGAACAATGCCATCCTAAAC+AGG | + | chr3.2:83194787-83194806 | MS.gene49003:intron | 45.0% | |
| GGAGCTCTTTCTTTAGATGG+AGG | + | chr3.2:83194484-83194503 | MS.gene49003:CDS | 45.0% | |
| GGAGGAATGATTAGGAGTTG+TGG | + | chr3.2:83194502-83194521 | MS.gene49003:CDS | 45.0% | |
| GTTGAAAACTTTGCCCATCC+TGG | + | chr3.2:83194623-83194642 | MS.gene49003:intron | 45.0% | |
| TATAAGCAACCTGGGACTGT+CGG | - | chr3.2:83192663-83192682 | None:intergenic | 45.0% | |
| TCTATTGGAAGGCCTTTGGA+TGG | + | chr3.2:83194082-83194101 | MS.gene49003:CDS | 45.0% | |
| TCTCCACATTACAACTGAGG+AGG | + | chr3.2:83193560-83193579 | MS.gene49003:CDS | 45.0% | |
| TCTTGGAGTGGAGACTATGT+TGG | + | chr3.2:83193961-83193980 | MS.gene49003:CDS | 45.0% | |
| TGGGGATGGACATGTATCTT+GGG | + | chr3.2:83192410-83192429 | MS.gene49003:intron | 45.0% | |
| TGTCTAACGCCAAGTGGTTA+TGG | + | chr3.2:83194367-83194386 | MS.gene49003:CDS | 45.0% | |
| TTACTAGGCACTACTTCAGC+AGG | - | chr3.2:83192443-83192462 | None:intergenic | 45.0% | |
| TTGGGGATGGACATGTATCT+TGG | + | chr3.2:83192409-83192428 | MS.gene49003:intron | 45.0% | |
| TTGTCAGACCCTGTTTAGGA+TGG | - | chr3.2:83194799-83194818 | None:intergenic | 45.0% | |
| ! | ACCTGGTTGTTGCTGTTACT+TGG | - | chr3.2:83191489-83191508 | None:intergenic | 45.0% |
| ! | ACTGGGTTGAGTCTAACAGA+AGG | + | chr3.2:83191894-83191913 | MS.gene49003:intron | 45.0% |
| ! | CTGGGTTGAGTCTAACAGAA+GGG | + | chr3.2:83191895-83191914 | MS.gene49003:intron | 45.0% |
| ! | TGGGTTGAGTCTAACAGAAG+GGG | + | chr3.2:83191896-83191915 | MS.gene49003:intron | 45.0% |
| ! | TGGTTGTTGCTGTTACTTGG+TGG | - | chr3.2:83191486-83191505 | None:intergenic | 45.0% |
| ! | TTGTTGCTGTTACTTGGTGG+TGG | - | chr3.2:83191483-83191502 | None:intergenic | 45.0% |
| ! | TTTCTCGGAGTATCTTGGAG+TGG | + | chr3.2:83193949-83193968 | MS.gene49003:CDS | 45.0% |
| !! | GCTGACCCAGAGTTTTTAGA+TGG | + | chr3.2:83193246-83193265 | MS.gene49003:intron | 45.0% |
| !! | GTTGGTGTTGTTGCTATGCT+AGG | + | chr3.2:83193693-83193712 | MS.gene49003:CDS | 45.0% |
| !!! | CCCCAATGTTTTTTCTGGTC+TGG | - | chr3.2:83195160-83195179 | None:intergenic | 45.0% |
| AACTTTGCCCATCCTGGGAT+AGG | + | chr3.2:83194629-83194648 | MS.gene49003:intron | 50.0% | |
| CAAAGCTAACTCAAGCGGTG+AGG | - | chr3.2:83193213-83193232 | None:intergenic | 50.0% | |
| CAAGATGATCTACGCTCGCT+TGG | + | chr3.2:83192841-83192860 | MS.gene49003:CDS | 50.0% | |
| CCACATTACAACTGAGGAGG+AGG | + | chr3.2:83193563-83193582 | MS.gene49003:CDS | 50.0% | |
| CCTCCTCCTCAGTTGTAATG+TGG | - | chr3.2:83193566-83193585 | None:intergenic | 50.0% | |
| CTAACTCAAGCGGTGAGGAT+TGG | - | chr3.2:83193208-83193227 | None:intergenic | 50.0% | |
| CTCCATGATGAGTCTTCACC+TGG | - | chr3.2:83193638-83193657 | None:intergenic | 50.0% | |
| GAAGACTCATCATGGAGCAC+AGG | + | chr3.2:83193641-83193660 | MS.gene49003:CDS | 50.0% | |
| GAGTGTCCGGCTGGATTTAT+TGG | + | chr3.2:83194301-83194320 | MS.gene49003:CDS | 50.0% | |
| GGCATTGTCAGACCCTGTTT+AGG | - | chr3.2:83194803-83194822 | None:intergenic | 50.0% | |
| TATGATCATCCGACAGTCCC+AGG | + | chr3.2:83192651-83192670 | MS.gene49003:intron | 50.0% | |
| TGCCAGGTGAAGACTCATCA+TGG | + | chr3.2:83193633-83193652 | MS.gene49003:CDS | 50.0% | |
| TGCCTCTATTGGAAGGCCTT+TGG | + | chr3.2:83194078-83194097 | MS.gene49003:CDS | 50.0% | |
| ! | CTCACCGCTTGAGTTAGCTT+TGG | + | chr3.2:83193211-83193230 | MS.gene49003:intron | 50.0% |
| !! | ACCGCTTGAGTTAGCTTTGG+AGG | + | chr3.2:83193214-83193233 | MS.gene49003:intron | 50.0% |
| !! | CTGTTACTTGGTGGTGGAAC+TGG | - | chr3.2:83191477-83191496 | None:intergenic | 50.0% |
| !! | TCTCTGAGGCCATAACCACT+TGG | - | chr3.2:83194379-83194398 | None:intergenic | 50.0% |
| ACTGCGGGAACAAGACGAAC+TGG | + | chr3.2:83191876-83191895 | MS.gene49003:intron | 55.0% | |
| CACTCCCCATTGGGCAATCT+TGG | - | chr3.2:83194286-83194305 | None:intergenic | 55.0% | |
| CTGCGGGAACAAGACGAACT+GGG | + | chr3.2:83191877-83191896 | MS.gene49003:intron | 55.0% | |
| GGCTAGGTGCCTCTATTGGA+AGG | + | chr3.2:83194071-83194090 | MS.gene49003:CDS | 55.0% | |
| TGCTGCTGGTATTCTGTGCC+AGG | + | chr3.2:83193617-83193636 | MS.gene49003:CDS | 55.0% | |
| TGTCCAAGGGTCTTCGGCAT+TGG | + | chr3.2:83192555-83192574 | MS.gene49003:intron | 55.0% | |
| !! | ATTGCCCAATGGGGAGTGTC+CGG | + | chr3.2:83194288-83194307 | MS.gene49003:CDS | 55.0% |
| GCACCAATGCCGAAGACCCT+TGG | - | chr3.2:83192561-83192580 | None:intergenic | 60.0% | |
| !! | CACGGGCTAGGTGCCTCTAT+TGG | + | chr3.2:83194067-83194086 | MS.gene49003:CDS | 60.0% |
| !! | GTCTTCGGCATTGGTGCCAG+TGG | + | chr3.2:83192564-83192583 | MS.gene49003:intron | 60.0% |
| !! | TAGAGGCACCTAGCCCGTGA+AGG | - | chr3.2:83194066-83194085 | None:intergenic | 60.0% |
| AGCTGTGGCCTTCACGGGCT+AGG | + | chr3.2:83194055-83194074 | MS.gene49003:CDS | 65.0% | |
| CCAGCCGGACACTCCCCATT+GGG | - | chr3.2:83194295-83194314 | None:intergenic | 65.0% | |
| TCCAGCCGGACACTCCCCAT+TGG | - | chr3.2:83194296-83194315 | None:intergenic | 65.0% | |
| !! | CCCAATGGGGAGTGTCCGGC+TGG | + | chr3.2:83194292-83194311 | MS.gene49003:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 83191468 | 83195336 | 83191468 | ID=MS.gene49003 |
| chr3.2 | mRNA | 83191468 | 83195336 | 83191468 | ID=MS.gene49003.t1;Parent=MS.gene49003 |
| chr3.2 | exon | 83191468 | 83191506 | 83191468 | ID=MS.gene49003.t1.exon1;Parent=MS.gene49003.t1 |
| chr3.2 | CDS | 83191468 | 83191506 | 83191468 | ID=cds.MS.gene49003.t1;Parent=MS.gene49003.t1 |
| chr3.2 | exon | 83192835 | 83192949 | 83192835 | ID=MS.gene49003.t1.exon2;Parent=MS.gene49003.t1 |
| chr3.2 | CDS | 83192835 | 83192949 | 83192835 | ID=cds.MS.gene49003.t1;Parent=MS.gene49003.t1 |
| chr3.2 | exon | 83193505 | 83193742 | 83193505 | ID=MS.gene49003.t1.exon3;Parent=MS.gene49003.t1 |
| chr3.2 | CDS | 83193505 | 83193742 | 83193505 | ID=cds.MS.gene49003.t1;Parent=MS.gene49003.t1 |
| chr3.2 | exon | 83193946 | 83194137 | 83193946 | ID=MS.gene49003.t1.exon4;Parent=MS.gene49003.t1 |
| chr3.2 | CDS | 83193946 | 83194137 | 83193946 | ID=cds.MS.gene49003.t1;Parent=MS.gene49003.t1 |
| chr3.2 | exon | 83194225 | 83194545 | 83194225 | ID=MS.gene49003.t1.exon5;Parent=MS.gene49003.t1 |
| chr3.2 | CDS | 83194225 | 83194545 | 83194225 | ID=cds.MS.gene49003.t1;Parent=MS.gene49003.t1 |
| chr3.2 | exon | 83195134 | 83195336 | 83195134 | ID=MS.gene49003.t1.exon6;Parent=MS.gene49003.t1 |
| chr3.2 | CDS | 83195134 | 83195336 | 83195134 | ID=cds.MS.gene49003.t1;Parent=MS.gene49003.t1 |
| Gene Sequence |
| Protein sequence |
