Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074527.t1 | RHN50467.1 | 76.7 | 554 | 51 | 4 | 1 | 484 | 158 | 703 | 1.50E-228 | 802.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074527.t1 | Q3M3Q5 | 36.1 | 169 | 100 | 2 | 322 | 485 | 27 | 192 | 4.3e-22 | 107.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074527.t1 | A0A072U6K3 | 76.7 | 554 | 51 | 4 | 1 | 484 | 99 | 644 | 1.1e-228 | 802.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene074527 | 0.828747 | 7.57E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene074527 | 0.814505 | 1.49E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene074527 | 0.816662 | 4.93E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene074527 | 0.833839 | 4.23E-56 | -1.69E-46 |
| MS.gene050228 | MS.gene074527 | 0.831634 | 1.49E-55 | -1.69E-46 |
| MS.gene050303 | MS.gene074527 | 0.822197 | 2.70E-53 | -1.69E-46 |
| MS.gene050330 | MS.gene074527 | -0.817589 | 3.05E-52 | -1.69E-46 |
| MS.gene050438 | MS.gene074527 | 0.836547 | 8.78E-57 | -1.69E-46 |
| MS.gene050442 | MS.gene074527 | 0.824143 | 9.47E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene074527 | -0.827131 | 1.85E-54 | -1.69E-46 |
| MS.gene050719 | MS.gene074527 | 0.831982 | 1.23E-55 | -1.69E-46 |
| MS.gene050721 | MS.gene074527 | 0.833584 | 4.90E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene074527 | 0.814106 | 1.82E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene074527 | 0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene074527 | 0.818328 | 2.08E-52 | -1.69E-46 |
| MS.gene051662 | MS.gene074527 | 0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene074527 | 0.802133 | 6.48E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene074527 | 0.808085 | 3.68E-50 | -1.69E-46 |
| MS.gene052302 | MS.gene074527 | 0.813366 | 2.65E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene074527 | 0.831736 | 1.41E-55 | -1.69E-46 |
| MS.gene052778 | MS.gene074527 | 0.810842 | 9.43E-51 | -1.69E-46 |
| MS.gene052856 | MS.gene074527 | 0.825883 | 3.68E-54 | -1.69E-46 |
| MS.gene052858 | MS.gene074527 | 0.831432 | 1.67E-55 | -1.69E-46 |
| MS.gene052860 | MS.gene074527 | 0.834689 | 2.59E-56 | -1.69E-46 |
| MS.gene053084 | MS.gene074527 | 0.801977 | 6.98E-49 | -1.69E-46 |
| MS.gene053085 | MS.gene074527 | 0.817578 | 3.07E-52 | -1.69E-46 |
| MS.gene053630 | MS.gene074527 | 0.838891 | 2.20E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene074527 | 0.811699 | 6.14E-51 | -1.69E-46 |
| MS.gene054596 | MS.gene074527 | 0.801012 | 1.10E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene074527 | 0.803874 | 2.83E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene074527 | 0.826432 | 2.72E-54 | -1.69E-46 |
| MS.gene055608 | MS.gene074527 | 0.825301 | 5.05E-54 | -1.69E-46 |
| MS.gene055778 | MS.gene074527 | 0.821866 | 3.22E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene074527 | 0.820559 | 6.44E-53 | -1.69E-46 |
| MS.gene056498 | MS.gene074527 | 0.824544 | 7.62E-54 | -1.69E-46 |
| MS.gene056760 | MS.gene074527 | 0.811655 | 6.28E-51 | -1.69E-46 |
| MS.gene056875 | MS.gene074527 | 0.822428 | 2.38E-53 | -1.69E-46 |
| MS.gene057260 | MS.gene074527 | 0.834665 | 2.63E-56 | -1.69E-46 |
| MS.gene057414 | MS.gene074527 | 0.801361 | 9.33E-49 | -1.69E-46 |
| MS.gene057750 | MS.gene074527 | 0.808923 | 2.44E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene074527 | 0.803015 | 4.26E-49 | -1.69E-46 |
| MS.gene05795 | MS.gene074527 | 0.802536 | 5.36E-49 | -1.69E-46 |
| MS.gene057967 | MS.gene074527 | 0.810382 | 1.19E-50 | -1.69E-46 |
| MS.gene057980 | MS.gene074527 | 0.812779 | 3.57E-51 | -1.69E-46 |
| MS.gene058084 | MS.gene074527 | 0.822049 | 2.92E-53 | -1.69E-46 |
| MS.gene058139 | MS.gene074527 | 0.815209 | 1.04E-51 | -1.69E-46 |
| MS.gene058146 | MS.gene074527 | 0.808333 | 3.26E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene074527 | 0.819272 | 1.27E-52 | -1.69E-46 |
| MS.gene058906 | MS.gene074527 | 0.804929 | 1.71E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene074527 | 0.803021 | 4.25E-49 | -1.69E-46 |
| MS.gene059220 | MS.gene074527 | 0.803926 | 2.76E-49 | -1.69E-46 |
| MS.gene059569 | MS.gene074527 | 0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene074527 | 0.806706 | 7.22E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene074527 | 0.801488 | 8.80E-49 | -1.69E-46 |
| MS.gene060476 | MS.gene074527 | 0.805265 | 1.45E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene074527 | 0.833749 | 4.46E-56 | -1.69E-46 |
| MS.gene060685 | MS.gene074527 | 0.830213 | 3.33E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene074527 | 0.808945 | 2.41E-50 | -1.69E-46 |
| MS.gene060907 | MS.gene074527 | 0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene060918 | MS.gene074527 | 0.808575 | 2.90E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene074527 | 0.820363 | 7.13E-53 | -1.69E-46 |
| MS.gene061040 | MS.gene074527 | -0.811695 | 6.15E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074527.t1 | MTR_6g018680 | 81.522 | 276 | 43 | 2 | 1 | 276 | 99 | 366 | 1.02e-146 | 441 |
| MS.gene074527.t1 | MTR_6g018680 | 93.897 | 213 | 9 | 1 | 276 | 484 | 432 | 644 | 2.66e-137 | 416 |
| MS.gene074527.t1 | MTR_8g009680 | 40.000 | 175 | 90 | 4 | 323 | 484 | 120 | 292 | 4.62e-33 | 129 |
| MS.gene074527.t1 | MTR_8g009700 | 37.714 | 175 | 94 | 4 | 323 | 484 | 83 | 255 | 2.86e-29 | 117 |
| MS.gene074527.t1 | MTR_2g066110 | 27.208 | 283 | 188 | 8 | 2 | 276 | 95 | 367 | 2.85e-19 | 91.7 |
| MS.gene074527.t1 | MTR_2g066120 | 27.341 | 267 | 173 | 7 | 2 | 259 | 22 | 276 | 3.37e-16 | 81.6 |
| MS.gene074527.t1 | MTR_2g066130 | 26.966 | 267 | 174 | 7 | 2 | 259 | 22 | 276 | 1.04e-15 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074527.t1 | AT5G17660 | 40.476 | 168 | 93 | 3 | 324 | 484 | 116 | 283 | 2.43e-31 | 124 |
| MS.gene074527.t1 | AT3G12780 | 28.014 | 282 | 187 | 7 | 2 | 276 | 97 | 369 | 1.14e-20 | 95.9 |
| MS.gene074527.t1 | AT1G56190 | 27.660 | 282 | 188 | 7 | 2 | 276 | 21 | 293 | 1.46e-19 | 92.0 |
| MS.gene074527.t1 | AT1G56190 | 27.660 | 282 | 188 | 7 | 2 | 276 | 94 | 366 | 4.24e-19 | 91.3 |
| MS.gene074527.t1 | AT1G79550 | 24.912 | 285 | 192 | 8 | 2 | 276 | 22 | 294 | 8.01e-16 | 80.5 |
| MS.gene074527.t1 | AT1G79550 | 24.912 | 285 | 192 | 8 | 2 | 276 | 22 | 294 | 8.01e-16 | 80.5 |
Find 124 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTCTTGTGGTTGATAT+TGG | 0.219246 | 6.3:-14630578 | MS.gene074527:CDS |
| AGGAAAGATTTGAACTTTCT+TGG | 0.253177 | 6.3:-14630380 | MS.gene074527:CDS |
| GACTACAAGGAGGGGAAGTA+TGG | 0.272959 | 6.3:-14627201 | MS.gene074527:CDS |
| AAGAAAGCTCCCTGGTGTTT+TGG | 0.283155 | 6.3:-14631088 | MS.gene074527:CDS |
| ATGAAAACCCATTTGGAGTT+AGG | 0.283264 | 6.3:-14629057 | MS.gene074527:intron |
| TTGCAAGGGTAAGCTTGTTT+TGG | 0.290168 | 6.3:-14629104 | MS.gene074527:CDS |
| GACATGCTCCTTGGAGTTCC+AGG | 0.300717 | 6.3:-14627389 | MS.gene074527:intron |
| TGGAGAATGGCCAAAGTAAT+TGG | 0.313536 | 6.3:-14629084 | MS.gene074527:CDS |
| GCGTCACCATTCTTTCTCTA+TGG | 0.321254 | 6.3:+14626768 | None:intergenic |
| TGAAATCTGATTGATTCTTC+TGG | 0.327378 | 6.3:+14632808 | None:intergenic |
| CAAATGGATTTGTTGAGTAT+TGG | 0.328366 | 6.3:-14626816 | MS.gene074527:CDS |
| AAATGGATTTGTTGAGTATT+GGG | 0.337932 | 6.3:-14626815 | MS.gene074527:CDS |
| AGATTTGAACTTTCTTGGTT+TGG | 0.339411 | 6.3:-14630375 | MS.gene074527:CDS |
| TTCGGATATGCTTGTTTAGC+TGG | 0.347272 | 6.3:-14632352 | MS.gene074527:CDS |
| CTATGCTATAGATTTCTTAT+CGG | 0.350176 | 6.3:-14632611 | MS.gene074527:CDS |
| CAATTGCTACATATGGCTTC+TGG | 0.361472 | 6.3:+14632278 | None:intergenic |
| GTTAAATTGTTGACGACAAA+TGG | 0.362002 | 6.3:-14626832 | MS.gene074527:CDS |
| CCCCTCCTTGTAGTCGTCTA+AGG | 0.371706 | 6.3:+14627209 | None:intergenic |
| TGGCTTGATGAAAACCCATT+TGG | 0.372419 | 6.3:-14629064 | MS.gene074527:CDS |
| TTTCAAATAATGCATGCATT+AGG | 0.383644 | 6.3:-14632106 | MS.gene074527:CDS |
| CCCTCGACTACCACCAAGTC+AGG | 0.386465 | 6.3:+14627428 | None:intergenic |
| CAATCTGACCTAACTCCAAA+TGG | 0.392554 | 6.3:+14629049 | None:intergenic |
| CAACAGTTTGACATAAAGAA+TGG | 0.396181 | 6.3:-14630211 | MS.gene074527:CDS |
| AGATCATCCTAGTCATTGAT+TGG | 0.401738 | 6.3:-14632743 | MS.gene074527:CDS |
| CATATCCTTTCGAAATCAAC+TGG | 0.403303 | 6.3:-14630625 | MS.gene074527:CDS |
| TCAATAAACCTGAAAATAGA+TGG | 0.404433 | 6.3:-14629699 | MS.gene074527:CDS |
| ATACAAGTTCATCCACTTCA+AGG | 0.411257 | 6.3:-14632577 | MS.gene074527:CDS |
| AGTACCGGTTCCTATTGATT+TGG | 0.416766 | 6.3:-14632083 | MS.gene074527:CDS |
| TTGAGAATGCTTCGGTTGTA+TGG | 0.416857 | 6.3:-14631125 | MS.gene074527:CDS |
| TTCAGAACTTCACACAAAAT+CGG | 0.418847 | 6.3:-14632709 | MS.gene074527:CDS |
| GGTTTATTGAAATCAGGGTT+TGG | 0.423467 | 6.3:+14629712 | None:intergenic |
| ACCGTTGGTGTTACTCGTTT+CGG | 0.425072 | 6.3:-14632370 | MS.gene074527:CDS |
| AGGCATACAATTGCTACATA+TGG | 0.435249 | 6.3:+14632271 | None:intergenic |
| TTTCATCAAGCCAATTACTT+TGG | 0.437930 | 6.3:+14629074 | None:intergenic |
| TTACGGTCCACCAAATCAAT+AGG | 0.453766 | 6.3:+14632073 | None:intergenic |
| AGTTATTCACCGGTTATCTT+CGG | 0.455289 | 6.3:-14632177 | MS.gene074527:CDS |
| GTGGTGGATCTTCTAGCATC+TGG | 0.456954 | 6.3:-14629646 | MS.gene074527:CDS |
| TGCATGTTCTATGGAACAAA+AGG | 0.457878 | 6.3:-14626872 | MS.gene074527:CDS |
| ACCGGTTCCTATTGATTTGG+TGG | 0.460226 | 6.3:-14632080 | MS.gene074527:CDS |
| TCCTCTAGCCCCTTTGAACT+AGG | 0.461960 | 6.3:-14627503 | MS.gene074527:intron |
| CACATGTTTGACATGCTCCT+TGG | 0.462951 | 6.3:-14627398 | MS.gene074527:CDS |
| TATGCTAGAGAATTATCTTC+AGG | 0.463431 | 6.3:-14632448 | MS.gene074527:CDS |
| GACTAGGATGATCTTTGCTC+CGG | 0.465566 | 6.3:+14632752 | None:intergenic |
| AAATATGCTTGAGAATGCTT+CGG | 0.467472 | 6.3:-14631133 | MS.gene074527:CDS |
| CTTCACACAAAATCGGTTGC+AGG | 0.474397 | 6.3:-14632702 | MS.gene074527:intron |
| ATTAAATATTTACATGAAGC+CGG | 0.475318 | 6.3:-14632771 | MS.gene074527:CDS |
| TTCTTCTTGAAATGGCGAAA+AGG | 0.475726 | 6.3:-14630403 | MS.gene074527:CDS |
| TTTCAGGTTTATTGAAATCA+GGG | 0.480490 | 6.3:+14629707 | None:intergenic |
| TGAGAATGAACTTTCTAGAA+TGG | 0.480938 | 6.3:-14627133 | MS.gene074527:CDS |
| CATGCAAAATCATAATCAAC+AGG | 0.482665 | 6.3:+14626889 | None:intergenic |
| AACAGTTTGACATAAAGAAT+GGG | 0.487062 | 6.3:-14630210 | MS.gene074527:intron |
| CAACAATGACCTAGTTCAAA+GGG | 0.488004 | 6.3:+14627494 | None:intergenic |
| TTCTTCTTACCCTGGAGAGT+TGG | 0.490193 | 6.3:-14629999 | MS.gene074527:CDS |
| CCCTGACTTGGTGGTAGTCG+AGG | 0.490751 | 6.3:-14627429 | MS.gene074527:CDS |
| GATCATCCTAGTCATTGATT+GGG | 0.501390 | 6.3:-14632742 | MS.gene074527:CDS |
| TCCACCAAATCAATAGGAAC+CGG | 0.505581 | 6.3:+14632079 | None:intergenic |
| GGATTTGTTGAGTATTGGGA+AGG | 0.509269 | 6.3:-14626811 | MS.gene074527:CDS |
| ACTTCACGACTCCCCTGACT+TGG | 0.509929 | 6.3:-14627441 | MS.gene074527:CDS |
| TCACGACTCCCCTGACTTGG+TGG | 0.510129 | 6.3:-14627438 | MS.gene074527:CDS |
| GAGCTTCACTAAATGCCTTA+CGG | 0.512317 | 6.3:+14632056 | None:intergenic |
| TATTGATTTGGTGGACCGTA+AGG | 0.513262 | 6.3:-14632071 | MS.gene074527:CDS |
| TGGTTTGGAGATGAATGAAA+AGG | 0.513271 | 6.3:-14630360 | MS.gene074527:intron |
| CTGTTTCCCAATCAATGACT+AGG | 0.517579 | 6.3:+14632736 | None:intergenic |
| TGCTACATATGGCTTCTGGT+TGG | 0.520046 | 6.3:+14632282 | None:intergenic |
| GATACAAGAACCAACTCTCC+AGG | 0.523598 | 6.3:+14629989 | None:intergenic |
| ATCTTTAATTGAAGCAGTGG+TGG | 0.525354 | 6.3:-14629662 | MS.gene074527:CDS |
| GTCCGTCCTCACATTGAAAG+AGG | 0.525437 | 6.3:+14627471 | None:intergenic |
| ACAAAAGGCGGTGAAAATAG+AGG | 0.529603 | 6.3:-14626857 | MS.gene074527:CDS |
| AACTTTATGAGAGTTTGAAA+AGG | 0.535791 | 6.3:+14632402 | None:intergenic |
| GATTTGTTGAGTATTGGGAA+GGG | 0.548631 | 6.3:-14626810 | MS.gene074527:CDS |
| CTATCAAGAGCCAAAACACC+AGG | 0.549378 | 6.3:+14631078 | None:intergenic |
| TTATTCCAGTTGATTTCGAA+AGG | 0.549578 | 6.3:+14630620 | None:intergenic |
| GAAGACCTTAGACGACTACA+AGG | 0.550927 | 6.3:-14627214 | MS.gene074527:CDS |
| AATGCATGCATTAGGAGTAC+CGG | 0.555270 | 6.3:-14632098 | MS.gene074527:CDS |
| TGAGAATGCTTCGGTTGTAT+GGG | 0.559606 | 6.3:-14631124 | MS.gene074527:CDS |
| ATTTGTTGAGTATTGGGAAG+GGG | 0.559635 | 6.3:-14626809 | MS.gene074527:CDS |
| CTTGTGGTTGATATTGGAAG+TGG | 0.560186 | 6.3:-14630572 | MS.gene074527:intron |
| GAAGGGGAAGAGTATTGCCT+TGG | 0.560488 | 6.3:-14626793 | MS.gene074527:CDS |
| AATCTGACCTAACTCCAAAT+GGG | 0.561481 | 6.3:+14629050 | None:intergenic |
| TGCCTCTTTCAATGTGAGGA+CGG | 0.565251 | 6.3:-14627473 | MS.gene074527:CDS |
| TCAATCGTTTCTTCTTACCC+TGG | 0.565462 | 6.3:-14630007 | MS.gene074527:CDS |
| CCTGACTTGGTGGTAGTCGA+GGG | 0.565662 | 6.3:-14627428 | MS.gene074527:CDS |
| CTCAAAGGAAGAAAGCTCCC+TGG | 0.567863 | 6.3:-14631096 | MS.gene074527:CDS |
| AAATCATAATCAACAGGCGG+TGG | 0.567933 | 6.3:+14626895 | None:intergenic |
| TTGTTGCCTCTTTCAATGTG+AGG | 0.569083 | 6.3:-14627477 | MS.gene074527:CDS |
| GAGATCTTTAATTGAAGCAG+TGG | 0.570067 | 6.3:-14629665 | MS.gene074527:CDS |
| ACCTTAGACGACTACAAGGA+GGG | 0.574159 | 6.3:-14627210 | MS.gene074527:CDS |
| TCATACGAAAAGCCTTGAAG+TGG | 0.574424 | 6.3:+14632565 | None:intergenic |
| AGAGGAGGCTCTCACGACTC+CGG | 0.575391 | 6.3:+14627163 | None:intergenic |
| GCAACAATGACCTAGTTCAA+AGG | 0.581165 | 6.3:+14627493 | None:intergenic |
| TCTTCTAGCATCTGGTGGAA+AGG | 0.588936 | 6.3:-14629638 | MS.gene074527:intron |
| TTCTTGAAATGGCGAAAAGG+AGG | 0.590119 | 6.3:-14630400 | MS.gene074527:CDS |
| CGTGAGAGCCTCCTCTGTGG+CGG | 0.590231 | 6.3:-14627156 | MS.gene074527:CDS |
| GTGGATCTTCTAGCATCTGG+TGG | 0.592765 | 6.3:-14629643 | MS.gene074527:CDS |
| TCTATCGATATGAGATCTTG+AGG | 0.593722 | 6.3:+14632199 | None:intergenic |
| GTTGTATGGGAATTTCTCAA+AGG | 0.594111 | 6.3:-14631111 | MS.gene074527:CDS |
| TGACGCAACTCAATCTCTTG+TGG | 0.604729 | 6.3:-14630588 | MS.gene074527:CDS |
| TTGGTGCCATAGAGAAAGAA+TGG | 0.608449 | 6.3:-14626774 | MS.gene074527:CDS |
| CATTCTCACCGCCACAGAGG+AGG | 0.609718 | 6.3:+14627148 | None:intergenic |
| CCTCGACTACCACCAAGTCA+GGG | 0.611912 | 6.3:+14627429 | None:intergenic |
| ACTACAAGGAGGGGAAGTAT+GGG | 0.614258 | 6.3:-14627200 | MS.gene074527:CDS |
| ATACAAGAACCAACTCTCCA+GGG | 0.618263 | 6.3:+14629990 | None:intergenic |
| ATATCGATAGAGTTATTCAC+CGG | 0.619479 | 6.3:-14632187 | MS.gene074527:CDS |
| CCATCCAAAAGTCCTTGAGA+AGG | 0.622630 | 6.3:+14631932 | None:intergenic |
| AACAAAACCCTGACATCTGG+AGG | 0.622684 | 6.3:+14632147 | None:intergenic |
| ATGGGTGCAGCTATAACCAC+CGG | 0.623181 | 6.3:-14627182 | MS.gene074527:CDS |
| CCTTAGACGACTACAAGGAG+GGG | 0.639504 | 6.3:-14627209 | MS.gene074527:CDS |
| TGACATAACCTGGAACTCCA+AGG | 0.641744 | 6.3:+14627381 | None:intergenic |
| ATTATGGTGATGAAGTGAAG+AGG | 0.646128 | 6.3:-14627236 | MS.gene074527:intron |
| CAAGGAGCATGTCAAACATG+TGG | 0.652659 | 6.3:+14627399 | None:intergenic |
| CTCGACTACCACCAAGTCAG+GGG | 0.653638 | 6.3:+14627430 | None:intergenic |
| GGAGGCTCTCACGACTCCGG+TGG | 0.657052 | 6.3:+14627166 | None:intergenic |
| GACCTTAGACGACTACAAGG+AGG | 0.658093 | 6.3:-14627211 | MS.gene074527:CDS |
| ATGTTCTATGGAACAAAAGG+CGG | 0.667404 | 6.3:-14626869 | MS.gene074527:CDS |
| ATTCTTTCTCTATGGCACCA+AGG | 0.667610 | 6.3:+14626776 | None:intergenic |
| AAAGTTCTAGCACCAACCGT+TGG | 0.668159 | 6.3:-14632385 | MS.gene074527:CDS |
| AAACGAGTAACACCAACGGT+TGG | 0.677443 | 6.3:+14632373 | None:intergenic |
| AGTCGTGAGAGCCTCCTCTG+TGG | 0.683664 | 6.3:-14627159 | MS.gene074527:CDS |
| AAAGGCGGTGAAAATAGAGG+AGG | 0.696933 | 6.3:-14626854 | MS.gene074527:CDS |
| GCAAAATCATAATCAACAGG+CGG | 0.703530 | 6.3:+14626892 | None:intergenic |
| AACAATGACCTAGTTCAAAG+GGG | 0.716146 | 6.3:+14627495 | None:intergenic |
| TATCAAGAGCCAAAACACCA+GGG | 0.722460 | 6.3:+14631079 | None:intergenic |
| TCCGAAACGAGTAACACCAA+CGG | 0.722877 | 6.3:+14632369 | None:intergenic |
| GTTCATTCTCACCGCCACAG+AGG | 0.757160 | 6.3:+14627145 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTAACTAAGAAATTAA+AGG | + | chr6.3:14631335-14631354 | None:intergenic | 10.0% |
| !! | TCAATATATTATAATATGTT+TGG | + | chr6.3:14631555-14631574 | None:intergenic | 10.0% |
| !! | TTTCTTAGTTAATTATAAAA+AGG | - | chr6.3:14631339-14631358 | MS.gene074527:intron | 10.0% |
| !!! | AATCAAAATGTAATAAATTT+TGG | + | chr6.3:14629674-14629693 | None:intergenic | 10.0% |
| !!! | AATTTGATTATAAATTTTGA+CGG | - | chr6.3:14627906-14627925 | MS.gene074527:intron | 10.0% |
| !!! | ATCAAAATGTAATAAATTTT+GGG | + | chr6.3:14629673-14629692 | None:intergenic | 10.0% |
| !!! | CCTTTTTATAATTTTATTTT+CGG | + | chr6.3:14631300-14631319 | None:intergenic | 10.0% |
| !! | AAAAATATAGATAAGTAAAG+AGG | + | chr6.3:14629337-14629356 | None:intergenic | 15.0% |
| !! | AAAATATAGATAAGTAAAGA+GGG | + | chr6.3:14629336-14629355 | None:intergenic | 15.0% |
| !! | AATAAAAAATTGTAAAATCG+AGG | - | chr6.3:14630850-14630869 | MS.gene074527:intron | 15.0% |
| !! | ATAAATGAAGTTATTCTATT+TGG | - | chr6.3:14627733-14627752 | MS.gene074527:intron | 15.0% |
| !! | ATCAAATACAGAAAATAATT+TGG | - | chr6.3:14628306-14628325 | MS.gene074527:intron | 15.0% |
| !! | CCGAAAATAAAATTATAAAA+AGG | - | chr6.3:14631297-14631316 | MS.gene074527:intron | 15.0% |
| !! | TGAATCATAAAATAAGAAAT+AGG | - | chr6.3:14631618-14631637 | MS.gene074527:intron | 15.0% |
| !!! | ATATTTTCATTTTAAGATCA+TGG | - | chr6.3:14628230-14628249 | MS.gene074527:intron | 15.0% |
| !!! | CTAACATCTATTTTTTTTAT+TGG | - | chr6.3:14631748-14631767 | MS.gene074527:intron | 15.0% |
| !!! | TACAATTTTTTTCTCTATAA+AGG | + | chr6.3:14631723-14631742 | None:intergenic | 15.0% |
| !!! | TCTTTTTTTTTTTTTTGTAG+AGG | - | chr6.3:14631645-14631664 | MS.gene074527:intron | 15.0% |
| !!! | TGATTTTGAAAATGTTAAAT+AGG | - | chr6.3:14631162-14631181 | MS.gene074527:CDS | 15.0% |
| !!! | TTTCTTGATTTATCTATTTT+AGG | - | chr6.3:14629557-14629576 | MS.gene074527:intron | 15.0% |
| !!! | TTTGTGTATATTTTTTACAT+TGG | - | chr6.3:14631021-14631040 | MS.gene074527:intron | 15.0% |
| !! | AATGATTTAGAAGATTAATC+GGG | + | chr6.3:14630078-14630097 | None:intergenic | 20.0% |
| !! | ACAACTCAAAATGTTAATTA+TGG | + | chr6.3:14631137-14631156 | None:intergenic | 20.0% |
| !! | ACATTATTGCACATTAAATT+TGG | + | chr6.3:14630963-14630982 | None:intergenic | 20.0% |
| !! | AGATCATACAAATTCATATA+TGG | - | chr6.3:14631107-14631126 | MS.gene074527:CDS | 20.0% |
| !! | ATACAGAAAATAATTTGGAT+TGG | - | chr6.3:14628311-14628330 | MS.gene074527:intron | 20.0% |
| !! | ATCTTTCAATATATTCGTAA+AGG | - | chr6.3:14631977-14631996 | MS.gene074527:CDS | 20.0% |
| !! | ATGATTTAGAAAACATCATT+CGG | + | chr6.3:14630636-14630655 | None:intergenic | 20.0% |
| !! | ATTAAATATTTACATGAAGC+CGG | - | chr6.3:14626852-14626871 | MS.gene074527:CDS | 20.0% |
| !! | ATTCAAAGAATAAAGTTAGA+TGG | + | chr6.3:14628288-14628307 | None:intergenic | 20.0% |
| !! | CAATGATTTAGAAGATTAAT+CGG | + | chr6.3:14630079-14630098 | None:intergenic | 20.0% |
| !! | GTTTATCACAATTAATAAGT+AGG | + | chr6.3:14629785-14629804 | None:intergenic | 20.0% |
| !! | TACCTTACAAATTTATTTAC+AGG | + | chr6.3:14627845-14627864 | None:intergenic | 20.0% |
| !! | TTTATTGGATGAAATCAATA+TGG | - | chr6.3:14631763-14631782 | MS.gene074527:intron | 20.0% |
| !! | TTTGAGCTTTCATATTAAAT+AGG | - | chr6.3:14626980-14626999 | MS.gene074527:intron | 20.0% |
| !!! | AATGATGTTTTCTAAATCAT+TGG | - | chr6.3:14630636-14630655 | MS.gene074527:intron | 20.0% |
| !!! | ATTGCATGTACAATTAATTT+TGG | - | chr6.3:14631081-14631100 | MS.gene074527:CDS | 20.0% |
| !!! | GTTAATGATGTTTAAAATCT+GGG | + | chr6.3:14628027-14628046 | None:intergenic | 20.0% |
| !!! | GTTTCATCATTGATTTATAA+AGG | - | chr6.3:14631270-14631289 | MS.gene074527:intron | 20.0% |
| !!! | TATTGTATCCAAAAGATTTT+TGG | - | chr6.3:14627629-14627648 | MS.gene074527:intron | 20.0% |
| !!! | TCTTATTTTATGATTCATGA+CGG | + | chr6.3:14631615-14631634 | None:intergenic | 20.0% |
| ! | AAATATCAGTGTTCAAATTC+TGG | + | chr6.3:14628193-14628212 | None:intergenic | 25.0% |
| ! | AACAGTTTGACATAAAGAAT+GGG | - | chr6.3:14629413-14629432 | MS.gene074527:intron | 25.0% |
| ! | AACTTTATGAGAGTTTGAAA+AGG | + | chr6.3:14627224-14627243 | None:intergenic | 25.0% |
| ! | AAGAAAGCTAAATTGTGATT+TGG | - | chr6.3:14631940-14631959 | MS.gene074527:CDS | 25.0% |
| ! | ACAAGCTAAAAATAAACCAA+CGG | + | chr6.3:14629370-14629389 | None:intergenic | 25.0% |
| ! | ATATTCTTGAGCATATCATT+CGG | - | chr6.3:14632685-14632704 | MS.gene074527:intron | 25.0% |
| ! | CTATGCTATAGATTTCTTAT+CGG | - | chr6.3:14627012-14627031 | MS.gene074527:intron | 25.0% |
| ! | GACCTGTAAATAAATTTGTA+AGG | - | chr6.3:14627840-14627859 | MS.gene074527:intron | 25.0% |
| ! | GAGAAAAAAGAAGAAATTAG+AGG | + | chr6.3:14631438-14631457 | None:intergenic | 25.0% |
| ! | GATAGTTTATGCAAAATTCA+AGG | + | chr6.3:14628833-14628852 | None:intergenic | 25.0% |
| ! | GATTAGACTTTAGTAATTGA+TGG | + | chr6.3:14629863-14629882 | None:intergenic | 25.0% |
| ! | TCAATAAACCTGAAAATAGA+TGG | - | chr6.3:14629924-14629943 | MS.gene074527:intron | 25.0% |
| ! | TGAATCATTATCCAGAAATA+TGG | + | chr6.3:14628596-14628615 | None:intergenic | 25.0% |
| ! | TTTCAAATAATGCATGCATT+AGG | - | chr6.3:14627517-14627536 | MS.gene074527:intron | 25.0% |
| !! | ATTGTGATTTGGAAATGTTA+TGG | - | chr6.3:14631951-14631970 | MS.gene074527:CDS | 25.0% |
| !! | CTAGTTTGTAAATTAGTGAA+TGG | - | chr6.3:14631686-14631705 | MS.gene074527:intron | 25.0% |
| !! | GAGGTATTCTAAGAAATTAA+AGG | + | chr6.3:14631419-14631438 | None:intergenic | 25.0% |
| !! | GGTTAATGATGTTTAAAATC+TGG | + | chr6.3:14628028-14628047 | None:intergenic | 25.0% |
| !! | TAGAAGGAAAATTGATGATT+GGG | + | chr6.3:14632311-14632330 | None:intergenic | 25.0% |
| !! | TCATCAATTTTCCTTCTAAA+TGG | - | chr6.3:14632313-14632332 | MS.gene074527:CDS | 25.0% |
| !! | TGAACATCCTTTTACAATAA+GGG | - | chr6.3:14630934-14630953 | MS.gene074527:intron | 25.0% |
| !! | TTAGAAGGAAAATTGATGAT+TGG | + | chr6.3:14632312-14632331 | None:intergenic | 25.0% |
| !! | TTATGATTTTGCATGTTCTA+TGG | - | chr6.3:14632742-14632761 | MS.gene074527:CDS | 25.0% |
| !! | TTATTTTCTACGATCTCAAT+TGG | - | chr6.3:14630279-14630298 | MS.gene074527:intron | 25.0% |
| !! | TTGAACATCCTTTTACAATA+AGG | - | chr6.3:14630933-14630952 | MS.gene074527:intron | 25.0% |
| !! | TTGTGATTTGGAAATGTTAT+GGG | - | chr6.3:14631952-14631971 | MS.gene074527:CDS | 25.0% |
| !!! | AAATGGATTTGTTGAGTATT+GGG | - | chr6.3:14632808-14632827 | MS.gene074527:CDS | 25.0% |
| !!! | ACAATTTTTGAGATATTGCA+AGG | - | chr6.3:14630504-14630523 | MS.gene074527:intron | 25.0% |
| !!! | CAATTTTTGAGATATTGCAA+GGG | - | chr6.3:14630505-14630524 | MS.gene074527:intron | 25.0% |
| !!! | TAATGTTGTTGCTTTCATAT+AGG | - | chr6.3:14629436-14629455 | MS.gene074527:intron | 25.0% |
| !!! | TTGCAAGAGTTTTAATCTTA+TGG | - | chr6.3:14628958-14628977 | MS.gene074527:intron | 25.0% |
| !!! | TTTCAGGTTTATTGAAATCA+GGG | + | chr6.3:14629919-14629938 | None:intergenic | 25.0% |
| !!! | TTTCTTTTAAAACAGTCCTT+AGG | - | chr6.3:14629147-14629166 | MS.gene074527:CDS | 25.0% |
| !!! | TTTTCAGGTTTATTGAAATC+AGG | + | chr6.3:14629920-14629939 | None:intergenic | 25.0% |
| !!! | TTTTTTACATGTTAGCATGA+GGG | + | chr6.3:14631897-14631916 | None:intergenic | 25.0% |
| AAATACGTGGTTAATTAGGT+TGG | - | chr6.3:14627938-14627957 | MS.gene074527:intron | 30.0% | |
| AAATATGCTTGAGAATGCTT+CGG | - | chr6.3:14628490-14628509 | MS.gene074527:intron | 30.0% | |
| AACTGCTTCAACCATTTAAA+TGG | - | chr6.3:14628057-14628076 | MS.gene074527:intron | 30.0% | |
| AACTGTGAAATAACTGTTGT+TGG | - | chr6.3:14628416-14628435 | MS.gene074527:intron | 30.0% | |
| AATACGTGGTTAATTAGGTT+GGG | - | chr6.3:14627939-14627958 | MS.gene074527:intron | 30.0% | |
| ACTATTCTACTCCATATTTC+TGG | - | chr6.3:14628582-14628601 | MS.gene074527:intron | 30.0% | |
| AGATTTGAACTTTCTTGGTT+TGG | - | chr6.3:14629248-14629267 | MS.gene074527:intron | 30.0% | |
| AGGAAAGATTTGAACTTTCT+TGG | - | chr6.3:14629243-14629262 | MS.gene074527:intron | 30.0% | |
| AGTAGGTTTGAATAAGTGAT+TGG | + | chr6.3:14629768-14629787 | None:intergenic | 30.0% | |
| ATATCGATAGAGTTATTCAC+CGG | - | chr6.3:14627436-14627455 | MS.gene074527:CDS | 30.0% | |
| ATTCTTGATGAACTAAGACA+AGG | - | chr6.3:14628392-14628411 | MS.gene074527:intron | 30.0% | |
| ATTGGAGATAACTGAAGTTT+CGG | - | chr6.3:14630654-14630673 | MS.gene074527:intron | 30.0% | |
| CAAATTTATTTACAGGTCCA+AGG | + | chr6.3:14627838-14627857 | None:intergenic | 30.0% | |
| CAACAGTTTGACATAAAGAA+TGG | - | chr6.3:14629412-14629431 | MS.gene074527:intron | 30.0% | |
| CAAGTTTGCAATAATTGCTA+TGG | + | chr6.3:14631579-14631598 | None:intergenic | 30.0% | |
| CATGCAAAATCATAATCAAC+AGG | + | chr6.3:14632737-14632756 | None:intergenic | 30.0% | |
| CTCATGCTAACATGTAAAAA+AGG | - | chr6.3:14631896-14631915 | MS.gene074527:intron | 30.0% | |
| CTTTAGTAATTGATGGAGAA+AGG | + | chr6.3:14629856-14629875 | None:intergenic | 30.0% | |
| GACTTTGACAACCATTTAAA+TGG | + | chr6.3:14628071-14628090 | None:intergenic | 30.0% | |
| GCACAATTTACCGAAATAAT+TGG | + | chr6.3:14628911-14628930 | None:intergenic | 30.0% | |
| GTTAAATTGTTGACGACAAA+TGG | - | chr6.3:14632791-14632810 | MS.gene074527:CDS | 30.0% | |
| GTTATAGCACTATAATGTAG+AGG | - | chr6.3:14630240-14630259 | MS.gene074527:CDS | 30.0% | |
| GTTCAAATACGTGGTTAATT+AGG | - | chr6.3:14627934-14627953 | MS.gene074527:intron | 30.0% | |
| TAAGGTCATACGTTAATCAA+TGG | - | chr6.3:14632092-14632111 | MS.gene074527:CDS | 30.0% | |
| TAGTGTATTATGACATAACC+TGG | + | chr6.3:14632255-14632274 | None:intergenic | 30.0% | |
| TATGCTAGAGAATTATCTTC+AGG | - | chr6.3:14627175-14627194 | MS.gene074527:CDS | 30.0% | |
| TCGCAGATATCGAAAAATAA+TGG | + | chr6.3:14628793-14628812 | None:intergenic | 30.0% | |
| TGTTTGGTAAAATATATCGC+TGG | + | chr6.3:14631539-14631558 | None:intergenic | 30.0% | |
| TTAATTCATCAACCCTTTGA+TGG | - | chr6.3:14630705-14630724 | MS.gene074527:intron | 30.0% | |
| TTAGATTCTCAACATTGATC+AGG | - | chr6.3:14630435-14630454 | MS.gene074527:intron | 30.0% | |
| TTCAGAACTTCACACAAAAT+CGG | - | chr6.3:14626914-14626933 | MS.gene074527:intron | 30.0% | |
| TTGTACTAAACAACGTATCA+TGG | + | chr6.3:14630192-14630211 | None:intergenic | 30.0% | |
| TTTCATCAAGCCAATTACTT+TGG | + | chr6.3:14630552-14630571 | None:intergenic | 30.0% | |
| ! | ATGTCATAATACACTAGCTT+TGG | - | chr6.3:14632259-14632278 | MS.gene074527:intron | 30.0% |
| ! | ATTTTTCTTACGTTAACCGT+TGG | - | chr6.3:14629351-14629370 | MS.gene074527:intron | 30.0% |
| ! | CTTTGATCAACGAATTTTAC+TGG | + | chr6.3:14628338-14628357 | None:intergenic | 30.0% |
| ! | GGAAAAACATGCAATTGTTT+TGG | + | chr6.3:14627673-14627692 | None:intergenic | 30.0% |
| ! | TCGATTTTTAACGTTGATCT+AGG | - | chr6.3:14627797-14627816 | MS.gene074527:intron | 30.0% |
| ! | TGAAATCTGATTGATTCTTC+TGG | + | chr6.3:14626818-14626837 | None:intergenic | 30.0% |
| ! | TGAGAATGAACTTTCTAGAA+TGG | - | chr6.3:14632490-14632509 | MS.gene074527:CDS | 30.0% |
| ! | TGTGATTTGGAAATGTTATG+GGG | - | chr6.3:14631953-14631972 | MS.gene074527:CDS | 30.0% |
| ! | TTATTCCAGTTGATTTCGAA+AGG | + | chr6.3:14629006-14629025 | None:intergenic | 30.0% |
| ! | TTCCTTTTCACAAAGTCAAA+AGG | - | chr6.3:14628260-14628279 | MS.gene074527:intron | 30.0% |
| ! | TTTTAACGTTGATCTAGGTT+GGG | - | chr6.3:14627802-14627821 | MS.gene074527:intron | 30.0% |
| ! | TTTTTAACGTTGATCTAGGT+TGG | - | chr6.3:14627801-14627820 | MS.gene074527:intron | 30.0% |
| ! | TTTTTACATGTTAGCATGAG+GGG | + | chr6.3:14631896-14631915 | None:intergenic | 30.0% |
| !! | CAAATGGATTTGTTGAGTAT+TGG | - | chr6.3:14632807-14632826 | MS.gene074527:CDS | 30.0% |
| !! | CTATGTTTTCAAGATGAGTA+AGG | + | chr6.3:14630046-14630065 | None:intergenic | 30.0% |
| !! | TATTTTTCGATATCTGCGAT+TGG | - | chr6.3:14628794-14628813 | MS.gene074527:intron | 30.0% |
| !! | TGGACTTTTTCTTCTTGAAA+TGG | - | chr6.3:14629212-14629231 | MS.gene074527:intron | 30.0% |
| !! | TGTCATAATACACTAGCTTT+GGG | - | chr6.3:14632260-14632279 | MS.gene074527:intron | 30.0% |
| !!! | AAAAACATGTTTTAGAGCGT+GGG | - | chr6.3:14630599-14630618 | MS.gene074527:CDS | 30.0% |
| !!! | CTTTTTTACATGTTAGCATG+AGG | + | chr6.3:14631898-14631917 | None:intergenic | 30.0% |
| !!! | TTCCTTTTGACTTTGTGAAA+AGG | + | chr6.3:14628265-14628284 | None:intergenic | 30.0% |
| !!! | TTTTGACTTTGTGAAAAGGA+AGG | + | chr6.3:14628261-14628280 | None:intergenic | 30.0% |
| AAAAACAAAACCCTGACATC+TGG | + | chr6.3:14627482-14627501 | None:intergenic | 35.0% | |
| AAAATAGATCCCACATGAAG+TGG | + | chr6.3:14631795-14631814 | None:intergenic | 35.0% | |
| AAAGTGTATCGCAGAAAGTA+TGG | + | chr6.3:14628699-14628718 | None:intergenic | 35.0% | |
| AAATCATTGCTCGTAGCATT+TGG | - | chr6.3:14630090-14630109 | MS.gene074527:intron | 35.0% | |
| AACAATACAGTTCAAGCACA+AGG | + | chr6.3:14628865-14628884 | None:intergenic | 35.0% | |
| AACAATGACCTAGTTCAAAG+GGG | + | chr6.3:14632131-14632150 | None:intergenic | 35.0% | |
| AACATCAACGTTGTCAATAG+CGG | - | chr6.3:14628628-14628647 | MS.gene074527:intron | 35.0% | |
| AATCATTGCTCGTAGCATTT+GGG | - | chr6.3:14630091-14630110 | MS.gene074527:intron | 35.0% | |
| AATCTGACCTAACTCCAAAT+GGG | + | chr6.3:14630576-14630595 | None:intergenic | 35.0% | |
| ACAATACAGTTCAAGCACAA+GGG | + | chr6.3:14628864-14628883 | None:intergenic | 35.0% | |
| ACTAAATGGGACCATTTAGA+AGG | + | chr6.3:14632327-14632346 | None:intergenic | 35.0% | |
| AGATCATCCTAGTCATTGAT+TGG | - | chr6.3:14626880-14626899 | MS.gene074527:CDS | 35.0% | |
| AGCTCAAAGTAATCCATCAA+AGG | + | chr6.3:14630721-14630740 | None:intergenic | 35.0% | |
| AGGCATACAATTGCTACATA+TGG | + | chr6.3:14627355-14627374 | None:intergenic | 35.0% | |
| ATACAAGTTCATCCACTTCA+AGG | - | chr6.3:14627046-14627065 | MS.gene074527:intron | 35.0% | |
| ATCTCGATGGCCAATTATTT+CGG | - | chr6.3:14628898-14628917 | MS.gene074527:intron | 35.0% | |
| ATCTTTAATTGAAGCAGTGG+TGG | - | chr6.3:14629961-14629980 | MS.gene074527:intron | 35.0% | |
| ATGTTCTATGGAACAAAAGG+CGG | - | chr6.3:14632754-14632773 | MS.gene074527:CDS | 35.0% | |
| CAACAATGACCTAGTTCAAA+GGG | + | chr6.3:14632132-14632151 | None:intergenic | 35.0% | |
| CATATCCTTTCGAAATCAAC+TGG | - | chr6.3:14628998-14629017 | MS.gene074527:intron | 35.0% | |
| GAAAACATCATTCGGTACAT+AGG | + | chr6.3:14630628-14630647 | None:intergenic | 35.0% | |
| GAGATCTTTAATTGAAGCAG+TGG | - | chr6.3:14629958-14629977 | MS.gene074527:intron | 35.0% | |
| GATCAAAGTGAACACACAAA+TGG | - | chr6.3:14628350-14628369 | MS.gene074527:intron | 35.0% | |
| GCAAAATCATAATCAACAGG+CGG | + | chr6.3:14632734-14632753 | None:intergenic | 35.0% | |
| GCTCAAAGTAATCCATCAAA+GGG | + | chr6.3:14630720-14630739 | None:intergenic | 35.0% | |
| GGTTTATTGAAATCAGGGTT+TGG | + | chr6.3:14629914-14629933 | None:intergenic | 35.0% | |
| GTTGAAGCAGTTCAAATTTG+TGG | + | chr6.3:14628049-14628068 | None:intergenic | 35.0% | |
| GTTGTATGGGAATTTCTCAA+AGG | - | chr6.3:14628512-14628531 | MS.gene074527:intron | 35.0% | |
| TAATGCAATAGCATCAGAAG+AGG | + | chr6.3:14627375-14627394 | None:intergenic | 35.0% | |
| TATGCATGATTCAACTCGTT+TGG | + | chr6.3:14630754-14630773 | None:intergenic | 35.0% | |
| TCATCACCATAATAAGCACT+GGG | + | chr6.3:14632380-14632399 | None:intergenic | 35.0% | |
| TCTATCGATATGAGATCTTG+AGG | + | chr6.3:14627427-14627446 | None:intergenic | 35.0% | |
| TGAAAAGCTCAAATGTCAAG+AGG | + | chr6.3:14629182-14629201 | None:intergenic | 35.0% | |
| TGAATAAGTGATTGGTGCAA+TGG | + | chr6.3:14629760-14629779 | None:intergenic | 35.0% | |
| TGATGTGAAATCCTCACATA+AGG | - | chr6.3:14632074-14632093 | MS.gene074527:CDS | 35.0% | |
| TGCATGTTCTATGGAACAAA+AGG | - | chr6.3:14632751-14632770 | MS.gene074527:CDS | 35.0% | |
| TTAACGTATGACCTTATGTG+AGG | + | chr6.3:14632088-14632107 | None:intergenic | 35.0% | |
| TTCATCACCATAATAAGCAC+TGG | + | chr6.3:14632381-14632400 | None:intergenic | 35.0% | |
| TTCTAAATGGTCCCATTTAG+TGG | - | chr6.3:14632326-14632345 | MS.gene074527:CDS | 35.0% | |
| TTCTTCTTGAAATGGCGAAA+AGG | - | chr6.3:14629220-14629239 | MS.gene074527:intron | 35.0% | |
| TTGGCATCCCTTATTGTAAA+AGG | + | chr6.3:14630944-14630963 | None:intergenic | 35.0% | |
| TTGTCAAATAGCAGCTATAG+TGG | - | chr6.3:14630141-14630160 | MS.gene074527:intron | 35.0% | |
| ! | ACATTTGAGCTTTTCATGAC+AGG | - | chr6.3:14629186-14629205 | MS.gene074527:intron | 35.0% |
| ! | AGCATTCTCCATCTATTTTC+AGG | + | chr6.3:14629935-14629954 | None:intergenic | 35.0% |
| ! | AGTTATTCACCGGTTATCTT+CGG | - | chr6.3:14627446-14627465 | MS.gene074527:CDS | 35.0% |
| ! | ATGAAAACCCATTTGGAGTT+AGG | - | chr6.3:14630566-14630585 | MS.gene074527:intron | 35.0% |
| ! | ATTATGGTGATGAAGTGAAG+AGG | - | chr6.3:14632387-14632406 | MS.gene074527:CDS | 35.0% |
| ! | ATTTAGACAGGAAGTACATC+AGG | + | chr6.3:14632518-14632537 | None:intergenic | 35.0% |
| ! | ATTTGGAGTTAGGTCAGATT+GGG | - | chr6.3:14630576-14630595 | MS.gene074527:CDS | 35.0% |
| ! | CAATCTCTTGTGGTTGATAT+TGG | - | chr6.3:14629045-14629064 | MS.gene074527:intron | 35.0% |
| ! | CACAAATGGAGCATCTAAAT+TGG | - | chr6.3:14628364-14628383 | MS.gene074527:intron | 35.0% |
| ! | GATCATCCTAGTCATTGATT+GGG | - | chr6.3:14626881-14626900 | MS.gene074527:CDS | 35.0% |
| ! | GGGATCTATTTTCAAAGTGT+GGG | - | chr6.3:14631803-14631822 | MS.gene074527:intron | 35.0% |
| ! | GGTTGCAGGTACATTTTTAA+AGG | - | chr6.3:14626935-14626954 | MS.gene074527:intron | 35.0% |
| ! | GTACATTTTGCTGCTATTGT+AGG | - | chr6.3:14632656-14632675 | MS.gene074527:intron | 35.0% |
| ! | GTTGGTTCTTGTATCAATAC+AGG | - | chr6.3:14629642-14629661 | MS.gene074527:CDS | 35.0% |
| ! | TGGGATCTATTTTCAAAGTG+TGG | - | chr6.3:14631802-14631821 | MS.gene074527:intron | 35.0% |
| ! | TGGTTTGGAGATGAATGAAA+AGG | - | chr6.3:14629263-14629282 | MS.gene074527:intron | 35.0% |
| ! | TTATGGTAGTCGAATTTTGC+AGG | - | chr6.3:14628975-14628994 | MS.gene074527:intron | 35.0% |
| ! | TTCCTGCACCAAAAATCTTT+TGG | + | chr6.3:14627640-14627659 | None:intergenic | 35.0% |
| ! | TTGCATGTTTTTCCTTCTCA+AGG | - | chr6.3:14627679-14627698 | MS.gene074527:intron | 35.0% |
| ! | TTTTATGATTCATGACGGCA+TGG | + | chr6.3:14631610-14631629 | None:intergenic | 35.0% |
| ! | TTTTCCTTCTCAAGGACTTT+TGG | - | chr6.3:14627687-14627706 | MS.gene074527:intron | 35.0% |
| !! | ATTTGTTGAGTATTGGGAAG+GGG | - | chr6.3:14632814-14632833 | MS.gene074527:CDS | 35.0% |
| !! | GATTTGTTGAGTATTGGGAA+GGG | - | chr6.3:14632813-14632832 | MS.gene074527:CDS | 35.0% |
| !! | GTCATAATACACTAGCTTTG+GGG | - | chr6.3:14632261-14632280 | MS.gene074527:intron | 35.0% |
| !! | TATATCGCTGGTTTCTTCAT+TGG | + | chr6.3:14631527-14631546 | None:intergenic | 35.0% |
| !! | TCATAATACACTAGCTTTGG+GGG | - | chr6.3:14632262-14632281 | MS.gene074527:intron | 35.0% |
| !! | TTGAACTATAGAGTTGATGG+AGG | - | chr6.3:14632014-14632033 | MS.gene074527:CDS | 35.0% |
| !!! | AAAACATGTTTTAGAGCGTG+GGG | - | chr6.3:14630600-14630619 | MS.gene074527:CDS | 35.0% |
| !!! | ATCCAAAAGATTTTTGGTGC+AGG | - | chr6.3:14627635-14627654 | MS.gene074527:intron | 35.0% |
| !!! | CAATTGGCAATACTGGTTTT+CGG | - | chr6.3:14630295-14630314 | MS.gene074527:intron | 35.0% |
| !!! | GAAAAACATGTTTTAGAGCG+TGG | - | chr6.3:14630598-14630617 | MS.gene074527:CDS | 35.0% |
| !!! | TGTCAGGGTTTTGTTTTTGT+TGG | - | chr6.3:14627484-14627503 | MS.gene074527:CDS | 35.0% |
| !!! | TTTAGCTGGTTTTCATTTCG+AGG | - | chr6.3:14627285-14627304 | MS.gene074527:intron | 35.0% |
| AAACTGCCATTGTGCTAAAC+GGG | + | chr6.3:14632555-14632574 | None:intergenic | 40.0% | |
| AAATCATAATCAACAGGCGG+TGG | + | chr6.3:14632731-14632750 | None:intergenic | 40.0% | |
| AAGTGTCCCAGTGCTTATTA+TGG | - | chr6.3:14632371-14632390 | MS.gene074527:CDS | 40.0% | |
| ACAAAAGGCGGTGAAAATAG+AGG | - | chr6.3:14632766-14632785 | MS.gene074527:CDS | 40.0% | |
| ACGATCTCAATTGGCAATAC+TGG | - | chr6.3:14630288-14630307 | MS.gene074527:intron | 40.0% | |
| AGCAAAAAAGGCTAGGAACA+AGG | + | chr6.3:14629312-14629331 | None:intergenic | 40.0% | |
| AGCTGATGTTGCATTTAGAC+AGG | + | chr6.3:14632530-14632549 | None:intergenic | 40.0% | |
| AGTAAAGAGGGCAGCAAAAA+AGG | + | chr6.3:14629324-14629343 | None:intergenic | 40.0% | |
| ATAAGTGATTGGTGCAATGG+TGG | + | chr6.3:14629757-14629776 | None:intergenic | 40.0% | |
| ATACAAGAACCAACTCTCCA+GGG | + | chr6.3:14629636-14629655 | None:intergenic | 40.0% | |
| ATCATTGCTCGTAGCATTTG+GGG | - | chr6.3:14630092-14630111 | MS.gene074527:intron | 40.0% | |
| ATTCTTTCTCTATGGCACCA+AGG | + | chr6.3:14632850-14632869 | None:intergenic | 40.0% | |
| CAAACTGCCATTGTGCTAAA+CGG | + | chr6.3:14632556-14632575 | None:intergenic | 40.0% | |
| CAAGAGGAACATGTAACCTA+AGG | + | chr6.3:14629166-14629185 | None:intergenic | 40.0% | |
| CAATACAGTTCAAGCACAAG+GGG | + | chr6.3:14628863-14628882 | None:intergenic | 40.0% | |
| CAATCTGACCTAACTCCAAA+TGG | + | chr6.3:14630577-14630596 | None:intergenic | 40.0% | |
| CAATTGCTACATATGGCTTC+TGG | + | chr6.3:14627348-14627367 | None:intergenic | 40.0% | |
| CGATATAAAATGCAGCGTAG+CGG | - | chr6.3:14628755-14628774 | MS.gene074527:intron | 40.0% | |
| CGCTTGAACTATAGAGTTGA+TGG | - | chr6.3:14632011-14632030 | MS.gene074527:CDS | 40.0% | |
| CTGTTTCCCAATCAATGACT+AGG | + | chr6.3:14626890-14626909 | None:intergenic | 40.0% | |
| GAGCTTCACTAAATGCCTTA+CGG | + | chr6.3:14627570-14627589 | None:intergenic | 40.0% | |
| GATGGATACTTCTTCAGAAC+TGG | + | chr6.3:14630896-14630915 | None:intergenic | 40.0% | |
| GCAACAATGACCTAGTTCAA+AGG | + | chr6.3:14632133-14632152 | None:intergenic | 40.0% | |
| GGCTAAAAACCGAAGATAAC+CGG | + | chr6.3:14627458-14627477 | None:intergenic | 40.0% | |
| GTCGATGTGTTGTCAAATAG+TGG | - | chr6.3:14628142-14628161 | MS.gene074527:intron | 40.0% | |
| TAAATGGTCCCATTTAGTGG+CGG | - | chr6.3:14632329-14632348 | MS.gene074527:CDS | 40.0% | |
| TAATTGGCCATCGAGATTTC+TGG | + | chr6.3:14628895-14628914 | None:intergenic | 40.0% | |
| TATCAAGAGCCAAAACACCA+GGG | + | chr6.3:14628547-14628566 | None:intergenic | 40.0% | |
| TCAATCGTTTCTTCTTACCC+TGG | - | chr6.3:14629616-14629635 | MS.gene074527:intron | 40.0% | |
| TCATACGAAAAGCCTTGAAG+TGG | + | chr6.3:14627061-14627080 | None:intergenic | 40.0% | |
| TCCACCAAATCAATAGGAAC+CGG | + | chr6.3:14627547-14627566 | None:intergenic | 40.0% | |
| TGAGAATGCTTCGGTTGTAT+GGG | - | chr6.3:14628499-14628518 | MS.gene074527:intron | 40.0% | |
| TGGAGAATGGCCAAAGTAAT+TGG | - | chr6.3:14630539-14630558 | MS.gene074527:intron | 40.0% | |
| TGGCTTGATGAAAACCCATT+TGG | - | chr6.3:14630559-14630578 | MS.gene074527:intron | 40.0% | |
| TTACGGTCCACCAAATCAAT+AGG | + | chr6.3:14627553-14627572 | None:intergenic | 40.0% | |
| TTCGGATATGCTTGTTTAGC+TGG | - | chr6.3:14627271-14627290 | MS.gene074527:intron | 40.0% | |
| TTCTTGAAATGGCGAAAAGG+AGG | - | chr6.3:14629223-14629242 | MS.gene074527:intron | 40.0% | |
| TTGAGAATGCTTCGGTTGTA+TGG | - | chr6.3:14628498-14628517 | MS.gene074527:intron | 40.0% | |
| TTGAGCATATCATTCGGCTT+AGG | - | chr6.3:14632691-14632710 | MS.gene074527:intron | 40.0% | |
| TTGTTGCCTCTTTCAATGTG+AGG | - | chr6.3:14632146-14632165 | MS.gene074527:CDS | 40.0% | |
| ! | AATGCATGCATTAGGAGTAC+CGG | - | chr6.3:14627525-14627544 | MS.gene074527:intron | 40.0% |
| ! | CATTTGGAGTTAGGTCAGAT+TGG | - | chr6.3:14630575-14630594 | MS.gene074527:CDS | 40.0% |
| ! | CTTGTGGTTGATATTGGAAG+TGG | - | chr6.3:14629051-14629070 | MS.gene074527:intron | 40.0% |
| ! | GGTCTTTTTGCAATCTGATG+TGG | - | chr6.3:14630456-14630475 | MS.gene074527:intron | 40.0% |
| ! | TTGATGGAGGCCATGATTTT+TGG | - | chr6.3:14632027-14632046 | MS.gene074527:CDS | 40.0% |
| !! | AGTACCGGTTCCTATTGATT+TGG | - | chr6.3:14627540-14627559 | MS.gene074527:intron | 40.0% |
| !! | GGATTTGTTGAGTATTGGGA+AGG | - | chr6.3:14632812-14632831 | MS.gene074527:CDS | 40.0% |
| !! | TATTGATTTGGTGGACCGTA+AGG | - | chr6.3:14627552-14627571 | MS.gene074527:intron | 40.0% |
| !! | TGGTTTCTTCATTGGTTTGG+TGG | + | chr6.3:14631519-14631538 | None:intergenic | 40.0% |
| !! | TTGCAAGGGTAAGCTTGTTT+TGG | - | chr6.3:14630519-14630538 | MS.gene074527:intron | 40.0% |
| !! | TTGGTGCCATAGAGAAAGAA+TGG | - | chr6.3:14632849-14632868 | MS.gene074527:CDS | 40.0% |
| !! | TTTTTAGCCTCCAGATGTCA+GGG | - | chr6.3:14627469-14627488 | MS.gene074527:CDS | 40.0% |
| !!! | GGTAAGCTTGTTTTGGAGAA+TGG | - | chr6.3:14630526-14630545 | MS.gene074527:intron | 40.0% |
| AAAAAGGCTAGGAACAAGGC+AGG | + | chr6.3:14629308-14629327 | None:intergenic | 45.0% | |
| AAACGAGTAACACCAACGGT+TGG | + | chr6.3:14627253-14627272 | None:intergenic | 45.0% | |
| AAAGGCGGTGAAAATAGAGG+AGG | - | chr6.3:14632769-14632788 | MS.gene074527:CDS | 45.0% | |
| AAATGGTCCCATTTAGTGGC+GGG | - | chr6.3:14632330-14632349 | MS.gene074527:CDS | 45.0% | |
| AACAAAACCCTGACATCTGG+AGG | + | chr6.3:14627479-14627498 | None:intergenic | 45.0% | |
| AACTGCCATTGTGCTAAACG+GGG | + | chr6.3:14632554-14632573 | None:intergenic | 45.0% | |
| AATCTGTTCCCGCCACTAAA+TGG | + | chr6.3:14632341-14632360 | None:intergenic | 45.0% | |
| AATGGTGGCAGTGACATCAA+CGG | + | chr6.3:14629742-14629761 | None:intergenic | 45.0% | |
| ACCTTAGACGACTACAAGGA+GGG | - | chr6.3:14632413-14632432 | MS.gene074527:CDS | 45.0% | |
| ACGGCAAGAGTTCAAATACG+TGG | - | chr6.3:14627925-14627944 | MS.gene074527:intron | 45.0% | |
| AGATCCCACATGAAGTGGTA+GGG | + | chr6.3:14631790-14631809 | None:intergenic | 45.0% | |
| AGTATCCATCCAGCTAGCAT+TGG | - | chr6.3:14630906-14630925 | MS.gene074527:intron | 45.0% | |
| ATATCTGCGATTGGCAATGC+TGG | - | chr6.3:14628803-14628822 | MS.gene074527:intron | 45.0% | |
| ATCTGTTCCCGCCACTAAAT+GGG | + | chr6.3:14632340-14632359 | None:intergenic | 45.0% | |
| CACATGTTTGACATGCTCCT+TGG | - | chr6.3:14632225-14632244 | MS.gene074527:intron | 45.0% | |
| CATCAACGGAGACGTATACA+TGG | + | chr6.3:14629728-14629747 | None:intergenic | 45.0% | |
| CATCACACTTCATTGCCAAG+AGG | + | chr6.3:14632059-14632078 | None:intergenic | 45.0% | |
| CCAGTTTCGATCCATGGTTT+GGG | - | chr6.3:14631468-14631487 | MS.gene074527:intron | 45.0% | |
| CCATCCAAAAGTCCTTGAGA+AGG | + | chr6.3:14627694-14627713 | None:intergenic | 45.0% | |
| CGTATACATGGCAGCACTAA+TGG | + | chr6.3:14629716-14629735 | None:intergenic | 45.0% | |
| CTATCAAGAGCCAAAACACC+AGG | + | chr6.3:14628548-14628567 | None:intergenic | 45.0% | |
| CTCAACACTCACTCTTTCGT+TGG | + | chr6.3:14631845-14631864 | None:intergenic | 45.0% | |
| CTTCACACAAAATCGGTTGC+AGG | - | chr6.3:14626921-14626940 | MS.gene074527:intron | 45.0% | |
| GAAGACCTTAGACGACTACA+AGG | - | chr6.3:14632409-14632428 | MS.gene074527:CDS | 45.0% | |
| GACTAGGATGATCTTTGCTC+CGG | + | chr6.3:14626874-14626893 | None:intergenic | 45.0% | |
| GATACAAGAACCAACTCTCC+AGG | + | chr6.3:14629637-14629656 | None:intergenic | 45.0% | |
| GGCAGGTGATGTAACAAGTA+TGG | + | chr6.3:14629291-14629310 | None:intergenic | 45.0% | |
| TAAGCCACCAGAAATCTCGA+TGG | - | chr6.3:14628885-14628904 | MS.gene074527:intron | 45.0% | |
| TAGATCCCACATGAAGTGGT+AGG | + | chr6.3:14631791-14631810 | None:intergenic | 45.0% | |
| TCCGAAACGAGTAACACCAA+CGG | + | chr6.3:14627257-14627276 | None:intergenic | 45.0% | |
| TCTTCTAGCATCTGGTGGAA+AGG | - | chr6.3:14629985-14630004 | MS.gene074527:intron | 45.0% | |
| TGACATAACCTGGAACTCCA+AGG | + | chr6.3:14632245-14632264 | None:intergenic | 45.0% | |
| TGACGCAACTCAATCTCTTG+TGG | - | chr6.3:14629035-14629054 | MS.gene074527:intron | 45.0% | |
| TGCCTCTTTCAATGTGAGGA+CGG | - | chr6.3:14632150-14632169 | MS.gene074527:CDS | 45.0% | |
| TGCTACATATGGCTTCTGGT+TGG | + | chr6.3:14627344-14627363 | None:intergenic | 45.0% | |
| TTCAACTCTCCAATGCTAGC+TGG | + | chr6.3:14630918-14630937 | None:intergenic | 45.0% | |
| TTCTTCTTACCCTGGAGAGT+TGG | - | chr6.3:14629624-14629643 | MS.gene074527:intron | 45.0% | |
| TTTACAGGTCCAAGGTCAAC+AGG | + | chr6.3:14627830-14627849 | None:intergenic | 45.0% | |
| TTTGTTGACCTCCCAAACCA+TGG | + | chr6.3:14631482-14631501 | None:intergenic | 45.0% | |
| ! | AAAGTTCTAGCACCAACCGT+TGG | - | chr6.3:14627238-14627257 | MS.gene074527:intron | 45.0% |
| ! | AAGAAAGCTCCCTGGTGTTT+TGG | - | chr6.3:14628535-14628554 | MS.gene074527:intron | 45.0% |
| ! | ACTACAAGGAGGGGAAGTAT+GGG | - | chr6.3:14632423-14632442 | MS.gene074527:CDS | 45.0% |
| ! | CAACGAAAGAGTGAGTGTTG+AGG | - | chr6.3:14631843-14631862 | MS.gene074527:intron | 45.0% |
| ! | CAAGGAGCATGTCAAACATG+TGG | + | chr6.3:14632227-14632246 | None:intergenic | 45.0% |
| ! | CCTTCTCAAGGACTTTTGGA+TGG | - | chr6.3:14627691-14627710 | MS.gene074527:intron | 45.0% |
| ! | GAGCTTTTCATGACAGGCAA+TGG | - | chr6.3:14629192-14629211 | MS.gene074527:intron | 45.0% |
| !! | ACCGGTTCCTATTGATTTGG+TGG | - | chr6.3:14627543-14627562 | MS.gene074527:intron | 45.0% |
| !! | ACCGTTGGTGTTACTCGTTT+CGG | - | chr6.3:14627253-14627272 | MS.gene074527:intron | 45.0% |
| !! | CGCTGGTTTCTTCATTGGTT+TGG | + | chr6.3:14631522-14631541 | None:intergenic | 45.0% |
| !!! | GTTTTTAGCCTCCAGATGTC+AGG | - | chr6.3:14627468-14627487 | MS.gene074527:CDS | 45.0% |
| !!! | TTAGCTTGTTTTGCGCTGTC+TGG | - | chr6.3:14629381-14629400 | MS.gene074527:intron | 45.0% |
| !! | AATATATATAAATAAAGTTA+TGG | - | chr6.3:14631248-14631267 | MS.gene074527:intron | 5.0% |
| !! | TATAAAAATTATAAATTTCT+AGG | + | chr6.3:14631047-14631066 | None:intergenic | 5.0% |
| ACCTAGTTCAAAGGGGCTAG+AGG | + | chr6.3:14632124-14632143 | None:intergenic | 50.0% | |
| ACTCTCCAATGCTAGCTGGA+TGG | + | chr6.3:14630914-14630933 | None:intergenic | 50.0% | |
| AGAGGGCAGCAAAAAAGGCT+AGG | + | chr6.3:14629319-14629338 | None:intergenic | 50.0% | |
| AGCTACCCCGTTTAGCACAA+TGG | - | chr6.3:14632546-14632565 | MS.gene074527:CDS | 50.0% | |
| ATGGACCCTACCACTTCATG+TGG | - | chr6.3:14631782-14631801 | MS.gene074527:intron | 50.0% | |
| ATGGGTGCAGCTATAACCAC+CGG | - | chr6.3:14632441-14632460 | MS.gene074527:CDS | 50.0% | |
| CCATGGATCGAAACTGGCTA+AGG | + | chr6.3:14631465-14631484 | None:intergenic | 50.0% | |
| CCCAAACCATGGATCGAAAC+TGG | + | chr6.3:14631471-14631490 | None:intergenic | 50.0% | |
| CCTTAGACGACTACAAGGAG+GGG | - | chr6.3:14632414-14632433 | MS.gene074527:CDS | 50.0% | |
| CCTTAGCCAGTTTCGATCCA+TGG | - | chr6.3:14631462-14631481 | MS.gene074527:intron | 50.0% | |
| CTCAAAGGAAGAAAGCTCCC+TGG | - | chr6.3:14628527-14628546 | MS.gene074527:intron | 50.0% | |
| GACCTTAGACGACTACAAGG+AGG | - | chr6.3:14632412-14632431 | MS.gene074527:CDS | 50.0% | |
| GACTACAAGGAGGGGAAGTA+TGG | - | chr6.3:14632422-14632441 | MS.gene074527:CDS | 50.0% | |
| GCCAGTTTCGATCCATGGTT+TGG | - | chr6.3:14631467-14631486 | MS.gene074527:intron | 50.0% | |
| GTCCGTCCTCACATTGAAAG+AGG | + | chr6.3:14632155-14632174 | None:intergenic | 50.0% | |
| GTGGATCTTCTAGCATCTGG+TGG | - | chr6.3:14629980-14629999 | MS.gene074527:intron | 50.0% | |
| TCCTCTAGCCCCTTTGAACT+AGG | - | chr6.3:14632120-14632139 | MS.gene074527:CDS | 50.0% | |
| TGGACCCTACCACTTCATGT+GGG | - | chr6.3:14631783-14631802 | MS.gene074527:intron | 50.0% | |
| ! | GAGGCGTCAGCCAAAAATCA+TGG | + | chr6.3:14632040-14632059 | None:intergenic | 50.0% |
| ! | GTTTCGATCCATGGTTTGGG+AGG | - | chr6.3:14631471-14631490 | MS.gene074527:intron | 50.0% |
| ! | TTGGCCATCGAGATTTCTGG+TGG | + | chr6.3:14628892-14628911 | None:intergenic | 50.0% |
| !! | GAAGGGGAAGAGTATTGCCT+TGG | - | chr6.3:14632830-14632849 | MS.gene074527:CDS | 50.0% |
| !! | GTGGTGGATCTTCTAGCATC+TGG | - | chr6.3:14629977-14629996 | MS.gene074527:intron | 50.0% |
| !! | TAGCTTTGGGGGCTTCTCTA+GGG | - | chr6.3:14632273-14632292 | MS.gene074527:intron | 50.0% |
| !!! | GATTTTTGGCTGACGCCTCT+TGG | - | chr6.3:14632041-14632060 | MS.gene074527:CDS | 50.0% |
| ACTTCACGACTCCCCTGACT+TGG | - | chr6.3:14632182-14632201 | MS.gene074527:CDS | 55.0% | |
| CCCCTCCTTGTAGTCGTCTA+AGG | + | chr6.3:14632417-14632436 | None:intergenic | 55.0% | |
| CCTCGACTACCACCAAGTCA+GGG | + | chr6.3:14632197-14632216 | None:intergenic | 55.0% | |
| CTCGACTACCACCAAGTCAG+GGG | + | chr6.3:14632196-14632215 | None:intergenic | 55.0% | |
| GACATGCTCCTTGGAGTTCC+AGG | - | chr6.3:14632234-14632253 | MS.gene074527:intron | 55.0% | |
| GTTCATTCTCACCGCCACAG+AGG | + | chr6.3:14632481-14632500 | None:intergenic | 55.0% | |
| TGTACGAGTCGCACGAGTAG+AGG | + | chr6.3:14632641-14632660 | None:intergenic | 55.0% | |
| ! | GGCGGGAACAGATTTTCTCG+AGG | - | chr6.3:14632347-14632366 | MS.gene074527:CDS | 55.0% |
| !! | CCTGACTTGGTGGTAGTCGA+GGG | - | chr6.3:14632195-14632214 | MS.gene074527:CDS | 55.0% |
| !! | CTAGCTTTGGGGGCTTCTCT+AGG | - | chr6.3:14632272-14632291 | MS.gene074527:intron | 55.0% |
| AGAGGAGGCTCTCACGACTC+CGG | + | chr6.3:14632463-14632482 | None:intergenic | 60.0% | |
| AGTCGTGAGAGCCTCCTCTG+TGG | - | chr6.3:14632464-14632483 | MS.gene074527:CDS | 60.0% | |
| CATTCTCACCGCCACAGAGG+AGG | + | chr6.3:14632478-14632497 | None:intergenic | 60.0% | |
| CCCTCGACTACCACCAAGTC+AGG | + | chr6.3:14632198-14632217 | None:intergenic | 60.0% | |
| GGTTGGGTGCCTGTTGACCT+TGG | - | chr6.3:14627818-14627837 | MS.gene074527:intron | 60.0% | |
| ! | GGGGGCTTCTCTAGGGATCT+AGG | - | chr6.3:14632280-14632299 | MS.gene074527:CDS | 60.0% |
| !! | CCCTGACTTGGTGGTAGTCG+AGG | - | chr6.3:14632194-14632213 | MS.gene074527:CDS | 60.0% |
| !! | TCACGACTCCCCTGACTTGG+TGG | - | chr6.3:14632185-14632204 | MS.gene074527:CDS | 60.0% |
| CGTGAGAGCCTCCTCTGTGG+CGG | - | chr6.3:14632467-14632486 | MS.gene074527:CDS | 65.0% | |
| GGAGGCTCTCACGACTCCGG+TGG | + | chr6.3:14632460-14632479 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 14626771 | 14632874 | 14626771 | ID=MS.gene074527 |
| chr6.3 | mRNA | 14626771 | 14632874 | 14626771 | ID=MS.gene074527.t1;Parent=MS.gene074527 |
| chr6.3 | exon | 14632703 | 14632874 | 14632703 | ID=MS.gene074527.t1.exon1;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14632703 | 14632874 | 14632703 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14632279 | 14632643 | 14632279 | ID=MS.gene074527.t1.exon2;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14632279 | 14632643 | 14632279 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14631933 | 14632221 | 14631933 | ID=MS.gene074527.t1.exon3;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14631933 | 14632221 | 14631933 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14631077 | 14631198 | 14631077 | ID=MS.gene074527.t1.exon4;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14631077 | 14631198 | 14631077 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14630573 | 14630648 | 14630573 | ID=MS.gene074527.t1.exon5;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14630573 | 14630648 | 14630573 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14630361 | 14630437 | 14630361 | ID=MS.gene074527.t1.exon6;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14630361 | 14630437 | 14630361 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14630211 | 14630260 | 14630211 | ID=MS.gene074527.t1.exon7;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14630211 | 14630260 | 14630211 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14629994 | 14630066 | 14629994 | ID=MS.gene074527.t1.exon8;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14629994 | 14630066 | 14629994 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14629639 | 14629737 | 14629639 | ID=MS.gene074527.t1.exon9;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14629639 | 14629737 | 14629639 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14629058 | 14629188 | 14629058 | ID=MS.gene074527.t1.exon10;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14629058 | 14629188 | 14629058 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14627390 | 14627517 | 14627390 | ID=MS.gene074527.t1.exon11;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14627390 | 14627517 | 14627390 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14627125 | 14627243 | 14627125 | ID=MS.gene074527.t1.exon12;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14627125 | 14627243 | 14627125 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| chr6.3 | exon | 14626771 | 14626932 | 14626771 | ID=MS.gene074527.t1.exon13;Parent=MS.gene074527.t1 |
| chr6.3 | CDS | 14626771 | 14626932 | 14626771 | ID=cds.MS.gene074527.t1;Parent=MS.gene074527.t1 |
| Gene Sequence |
| Protein sequence |
