Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78247.t1 | XP_003609680.1 | 91.3 | 446 | 39 | 0 | 1 | 446 | 1 | 446 | 3.50E-227 | 797.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78247.t1 | Q94F30 | 46.8 | 447 | 211 | 9 | 13 | 447 | 15 | 446 | 2.9e-97 | 357.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78247.t1 | G7JLI2 | 91.3 | 446 | 39 | 0 | 1 | 446 | 1 | 446 | 2.6e-227 | 797.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene78247 | 0.82535 | 4.92E-54 | -1.69E-46 |
| MS.gene049151 | MS.gene78247 | 0.847457 | 1.14E-59 | -1.69E-46 |
| MS.gene049153 | MS.gene78247 | 0.829289 | 5.60E-55 | -1.69E-46 |
| MS.gene049159 | MS.gene78247 | 0.804014 | 2.65E-49 | -1.69E-46 |
| MS.gene049230 | MS.gene78247 | 0.813076 | 3.07E-51 | -1.69E-46 |
| MS.gene049297 | MS.gene78247 | 0.822929 | 1.82E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene78247 | 0.869326 | 3.37E-66 | -1.69E-46 |
| MS.gene049382 | MS.gene78247 | 0.809295 | 2.03E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene78247 | 0.808188 | 3.50E-50 | -1.69E-46 |
| MS.gene049647 | MS.gene78247 | 0.813709 | 2.23E-51 | -1.69E-46 |
| MS.gene049756 | MS.gene78247 | 0.818086 | 2.35E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene78247 | 0.850866 | 1.29E-60 | -1.69E-46 |
| MS.gene04984 | MS.gene78247 | 0.817646 | 2.96E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene78247 | 0.827651 | 1.39E-54 | -1.69E-46 |
| MS.gene049915 | MS.gene78247 | 0.816746 | 4.72E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene78247 | 0.881305 | 2.68E-70 | -1.69E-46 |
| MS.gene050227 | MS.gene78247 | 0.891019 | 5.82E-74 | -1.69E-46 |
| MS.gene050228 | MS.gene78247 | 0.884062 | 2.64E-71 | -1.69E-46 |
| MS.gene050303 | MS.gene78247 | 0.814872 | 1.23E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene78247 | -0.80823 | 3.43E-50 | -1.69E-46 |
| MS.gene050438 | MS.gene78247 | 0.822765 | 1.99E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene78247 | 0.861139 | 1.26E-63 | -1.69E-46 |
| MS.gene050623 | MS.gene78247 | -0.897872 | 9.22E-77 | -1.69E-46 |
| MS.gene050629 | MS.gene78247 | -0.816075 | 6.67E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene78247 | 0.855782 | 5.01E-62 | -1.69E-46 |
| MS.gene050680 | MS.gene78247 | 0.800859 | 1.18E-48 | -1.69E-46 |
| MS.gene050719 | MS.gene78247 | 0.859588 | 3.73E-63 | -1.69E-46 |
| MS.gene050721 | MS.gene78247 | 0.861643 | 8.88E-64 | -1.69E-46 |
| MS.gene050724 | MS.gene78247 | 0.85594 | 4.50E-62 | -1.69E-46 |
| MS.gene050750 | MS.gene78247 | 0.805335 | 1.40E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene78247 | 0.847418 | 1.17E-59 | -1.69E-46 |
| MS.gene050763 | MS.gene78247 | 0.849621 | 2.87E-60 | -1.69E-46 |
| MS.gene050815 | MS.gene78247 | 0.810252 | 1.26E-50 | -1.69E-46 |
| MS.gene050820 | MS.gene78247 | 0.822944 | 1.81E-53 | -1.69E-46 |
| MS.gene050824 | MS.gene78247 | 0.846183 | 2.55E-59 | -1.69E-46 |
| MS.gene050953 | MS.gene78247 | 0.815869 | 7.41E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene78247 | -0.825734 | 3.99E-54 | -1.69E-46 |
| MS.gene051210 | MS.gene78247 | 0.826612 | 2.47E-54 | -1.69E-46 |
| MS.gene051257 | MS.gene78247 | 0.803212 | 3.88E-49 | -1.69E-46 |
| MS.gene051344 | MS.gene78247 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene051662 | MS.gene78247 | 0.822594 | 2.18E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene78247 | 0.829071 | 6.32E-55 | -1.69E-46 |
| MS.gene051790 | MS.gene78247 | 0.809003 | 2.34E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene78247 | 0.863645 | 2.15E-64 | -1.69E-46 |
| MS.gene051983 | MS.gene78247 | 0.871204 | 8.16E-67 | -1.69E-46 |
| MS.gene052012 | MS.gene78247 | 0.833727 | 4.52E-56 | -1.69E-46 |
| MS.gene052048 | MS.gene78247 | -0.808455 | 3.07E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene78247 | 0.830078 | 3.60E-55 | -1.69E-46 |
| MS.gene052176 | MS.gene78247 | 0.816161 | 6.38E-52 | -1.69E-46 |
| MS.gene052302 | MS.gene78247 | 0.812063 | 5.12E-51 | -1.69E-46 |
| MS.gene052309 | MS.gene78247 | -0.829757 | 4.31E-55 | -1.69E-46 |
| MS.gene052323 | MS.gene78247 | 0.823606 | 1.26E-53 | -1.69E-46 |
| MS.gene052376 | MS.gene78247 | 0.833664 | 4.68E-56 | -1.69E-46 |
| MS.gene052384 | MS.gene78247 | 0.828297 | 9.72E-55 | -1.69E-46 |
| MS.gene052426 | MS.gene78247 | 0.821184 | 4.62E-53 | -1.69E-46 |
| MS.gene052856 | MS.gene78247 | 0.821349 | 4.23E-53 | -1.69E-46 |
| MS.gene052858 | MS.gene78247 | 0.816705 | 4.82E-52 | -1.69E-46 |
| MS.gene052860 | MS.gene78247 | 0.816603 | 5.08E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene78247 | 0.809444 | 1.89E-50 | -1.69E-46 |
| MS.gene053184 | MS.gene78247 | 0.813522 | 2.45E-51 | -1.69E-46 |
| MS.gene053216 | MS.gene78247 | 0.81457 | 1.44E-51 | -1.69E-46 |
| MS.gene053381 | MS.gene78247 | 0.801578 | 8.43E-49 | -1.69E-46 |
| MS.gene053630 | MS.gene78247 | 0.805946 | 1.04E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene78247 | 0.870146 | 1.82E-66 | -1.69E-46 |
| MS.gene054184 | MS.gene78247 | 0.826133 | 3.21E-54 | -1.69E-46 |
| MS.gene054185 | MS.gene78247 | 0.836141 | 1.11E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene78247 | 0.860211 | 2.42E-63 | -1.69E-46 |
| MS.gene054405 | MS.gene78247 | 0.803937 | 2.75E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene78247 | 0.815057 | 1.12E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene78247 | 0.815684 | 8.15E-52 | -1.69E-46 |
| MS.gene054542 | MS.gene78247 | 0.819329 | 1.23E-52 | -1.69E-46 |
| MS.gene054658 | MS.gene78247 | 0.817474 | 3.24E-52 | -1.69E-46 |
| MS.gene054713 | MS.gene78247 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene78247 | 0.863998 | 1.67E-64 | -1.69E-46 |
| MS.gene054942 | MS.gene78247 | 0.838368 | 3.00E-57 | -1.69E-46 |
| MS.gene054983 | MS.gene78247 | 0.815873 | 7.39E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene78247 | 0.840054 | 1.10E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene78247 | 0.808956 | 2.40E-50 | -1.69E-46 |
| MS.gene055441 | MS.gene78247 | 0.809046 | 2.30E-50 | -1.69E-46 |
| MS.gene055608 | MS.gene78247 | 0.815797 | 7.69E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene78247 | 0.836861 | 7.30E-57 | -1.69E-46 |
| MS.gene055816 | MS.gene78247 | -0.805653 | 1.20E-49 | -1.69E-46 |
| MS.gene055924 | MS.gene78247 | 0.80349 | 3.40E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene78247 | -0.80421 | 2.41E-49 | -1.69E-46 |
| MS.gene056400 | MS.gene78247 | 0.823139 | 1.63E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene78247 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene056552 | MS.gene78247 | 0.837344 | 5.49E-57 | -1.69E-46 |
| MS.gene056760 | MS.gene78247 | 0.801106 | 1.05E-48 | -1.69E-46 |
| MS.gene056875 | MS.gene78247 | 0.843848 | 1.09E-58 | -1.69E-46 |
| MS.gene056979 | MS.gene78247 | 0.870527 | 1.36E-66 | -1.69E-46 |
| MS.gene057245 | MS.gene78247 | 0.801314 | 9.55E-49 | -1.69E-46 |
| MS.gene057260 | MS.gene78247 | 0.821205 | 4.57E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene78247 | 0.813379 | 2.64E-51 | -1.69E-46 |
| MS.gene05761 | MS.gene78247 | 0.841217 | 5.43E-58 | -1.69E-46 |
| MS.gene057665 | MS.gene78247 | 0.809396 | 1.93E-50 | -1.69E-46 |
| MS.gene057750 | MS.gene78247 | 0.816249 | 6.10E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene78247 | 0.817213 | 3.71E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene78247 | 0.812626 | 3.86E-51 | -1.69E-46 |
| MS.gene057967 | MS.gene78247 | 0.801419 | 9.08E-49 | -1.69E-46 |
| MS.gene057980 | MS.gene78247 | 0.817661 | 2.94E-52 | -1.69E-46 |
| MS.gene058084 | MS.gene78247 | 0.813645 | 2.30E-51 | -1.69E-46 |
| MS.gene05811 | MS.gene78247 | 0.804889 | 1.74E-49 | -1.69E-46 |
| MS.gene058139 | MS.gene78247 | 0.818091 | 2.35E-52 | -1.69E-46 |
| MS.gene058146 | MS.gene78247 | 0.840058 | 1.09E-57 | -1.69E-46 |
| MS.gene058168 | MS.gene78247 | 0.818305 | 2.10E-52 | -1.69E-46 |
| MS.gene058182 | MS.gene78247 | 0.826419 | 2.74E-54 | -1.69E-46 |
| MS.gene058399 | MS.gene78247 | 0.848084 | 7.68E-60 | -1.69E-46 |
| MS.gene058435 | MS.gene78247 | 0.807547 | 4.79E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene78247 | 0.805593 | 1.24E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene78247 | 0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene058710 | MS.gene78247 | 0.819045 | 1.43E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene78247 | 0.816822 | 4.54E-52 | -1.69E-46 |
| MS.gene058845 | MS.gene78247 | 0.813304 | 2.74E-51 | -1.69E-46 |
| MS.gene059124 | MS.gene78247 | 0.800596 | 1.34E-48 | -1.69E-46 |
| MS.gene059128 | MS.gene78247 | 0.827589 | 1.44E-54 | -1.69E-46 |
| MS.gene059220 | MS.gene78247 | 0.806734 | 7.12E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene78247 | 0.8255 | 4.53E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene78247 | 0.808853 | 2.53E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene78247 | 0.842394 | 2.66E-58 | -1.69E-46 |
| MS.gene060084 | MS.gene78247 | 0.851784 | 7.08E-61 | -1.69E-46 |
| MS.gene060137 | MS.gene78247 | -0.809037 | 2.31E-50 | -1.69E-46 |
| MS.gene060297 | MS.gene78247 | 0.829522 | 4.91E-55 | -1.69E-46 |
| MS.gene060404 | MS.gene78247 | 0.821338 | 4.26E-53 | -1.69E-46 |
| MS.gene060476 | MS.gene78247 | 0.818947 | 1.50E-52 | -1.69E-46 |
| MS.gene060480 | MS.gene78247 | 0.819283 | 1.26E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene78247 | 0.811419 | 7.07E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene78247 | 0.816723 | 4.77E-52 | -1.69E-46 |
| MS.gene060683 | MS.gene78247 | 0.852266 | 5.17E-61 | -1.69E-46 |
| MS.gene060685 | MS.gene78247 | 0.842151 | 3.08E-58 | -1.69E-46 |
| MS.gene060802 | MS.gene78247 | 0.847797 | 9.21E-60 | -1.69E-46 |
| MS.gene060803 | MS.gene78247 | 0.837863 | 4.04E-57 | -1.69E-46 |
| MS.gene060869 | MS.gene78247 | 0.80246 | 5.55E-49 | -1.69E-46 |
| MS.gene060942 | MS.gene78247 | 0.800686 | 1.28E-48 | -1.69E-46 |
| MS.gene060998 | MS.gene78247 | 0.846986 | 1.54E-59 | -1.69E-46 |
| MS.gene061040 | MS.gene78247 | -0.816238 | 6.13E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene78247 | 0.80757 | 4.74E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78247.t1 | MTR_4g119970 | 93.722 | 446 | 28 | 0 | 1 | 446 | 1 | 446 | 0.0 | 858 |
| MS.gene78247.t1 | MTR_4g119970 | 89.802 | 353 | 36 | 0 | 1 | 353 | 1 | 353 | 0.0 | 645 |
| MS.gene78247.t1 | MTR_2g436660 | 56.009 | 441 | 162 | 9 | 10 | 447 | 9 | 420 | 2.17e-158 | 456 |
| MS.gene78247.t1 | MTR_2g436660 | 54.680 | 406 | 152 | 9 | 10 | 412 | 9 | 385 | 7.68e-135 | 394 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78247.t1 | AT4G15880 | 47.651 | 447 | 207 | 9 | 13 | 447 | 15 | 446 | 7.52e-130 | 384 |
| MS.gene78247.t1 | AT4G15880 | 47.202 | 411 | 190 | 9 | 13 | 411 | 15 | 410 | 2.44e-113 | 339 |
| MS.gene78247.t1 | AT3G06910 | 45.792 | 404 | 194 | 8 | 56 | 447 | 69 | 459 | 2.05e-106 | 325 |
| MS.gene78247.t1 | AT4G00690 | 58.462 | 195 | 78 | 3 | 255 | 447 | 105 | 298 | 1.85e-77 | 245 |
| MS.gene78247.t1 | AT1G10570 | 31.944 | 144 | 80 | 5 | 255 | 387 | 296 | 432 | 2.06e-15 | 79.0 |
| MS.gene78247.t1 | AT1G10570 | 31.944 | 144 | 80 | 5 | 255 | 387 | 295 | 431 | 2.17e-15 | 79.0 |
| MS.gene78247.t1 | AT1G10570 | 31.944 | 144 | 80 | 5 | 255 | 387 | 165 | 301 | 2.36e-15 | 78.2 |
| MS.gene78247.t1 | AT1G60220 | 30.481 | 187 | 97 | 9 | 288 | 447 | 343 | 523 | 5.13e-14 | 74.7 |
Find 91 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCAAAGGTGGTTTGGTTT+TGG | 0.195128 | 8.4:+11983913 | None:intergenic |
| ATGGACTACTCAAAAGAAAT+TGG | 0.212207 | 8.4:-11981310 | MS.gene78247:CDS |
| TTTGCCTGATATCTCAATAT+TGG | 0.236687 | 8.4:+11983008 | None:intergenic |
| TTTGGTTTGTTTGGATAATA+AGG | 0.263540 | 8.4:-11983609 | MS.gene78247:CDS |
| ACCTCAACTAATTCCTTCTT+TGG | 0.266530 | 8.4:+11983362 | None:intergenic |
| GGTGCCTAAGGCCAGGTTTA+TGG | 0.267544 | 8.4:-11982978 | MS.gene78247:CDS |
| TTTGGGATAACGAGAAATTC+TGG | 0.275525 | 8.4:+11983931 | None:intergenic |
| TGATACCACTAATGAGTTAA+TGG | 0.287391 | 8.4:-11983798 | MS.gene78247:CDS |
| GAAGAATGGTTTGGTTTGTT+TGG | 0.294046 | 8.4:-11983618 | MS.gene78247:CDS |
| GGTTTGTTTCTACAGGAATA+AGG | 0.325846 | 8.4:-11983052 | MS.gene78247:intron |
| ACAAACCCGTTCATCTGTTC+AGG | 0.331816 | 8.4:+11979867 | None:intergenic |
| AGTACGAAGAATGATCTTTC+CGG | 0.343612 | 8.4:-11983503 | MS.gene78247:CDS |
| ACTCAAAAGAAATTGGGATA+TGG | 0.345849 | 8.4:-11981303 | MS.gene78247:CDS |
| GCAACAGTCAGCTTCATCTA+TGG | 0.349445 | 8.4:-11983561 | MS.gene78247:CDS |
| ATCAGAATCATCAAATTTGA+TGG | 0.363020 | 8.4:-11983825 | MS.gene78247:CDS |
| AAATCCAATATTGAGATATC+AGG | 0.376735 | 8.4:-11983012 | MS.gene78247:CDS |
| CAATGGATCCGCTGGTGAAT+AGG | 0.376943 | 8.4:+11981156 | None:intergenic |
| AGCATACTGGTTGGCAGAAA+AGG | 0.381237 | 8.4:+11983135 | None:intergenic |
| AAGATGTTGACATTAGTTCT+TGG | 0.382167 | 8.4:-11979914 | MS.gene78247:CDS |
| TACTATCTCTTATAGAGAAA+AGG | 0.383441 | 8.4:-11983741 | MS.gene78247:CDS |
| TTCTCTACGCAAAGGTGGTT+TGG | 0.383598 | 8.4:+11983907 | None:intergenic |
| AGATGTTGACATTAGTTCTT+GGG | 0.400870 | 8.4:-11979913 | MS.gene78247:CDS |
| CACGTTGAAGAAGAATGGTT+TGG | 0.426961 | 8.4:-11983627 | MS.gene78247:CDS |
| AGATATCAGGCAAAATGTTT+CGG | 0.428181 | 8.4:-11982999 | MS.gene78247:CDS |
| ACTATCTCTTATAGAGAAAA+GGG | 0.436696 | 8.4:-11983740 | MS.gene78247:CDS |
| CAACGGAGAGCCAGCGATAA+GGG | 0.436697 | 8.4:+11984059 | None:intergenic |
| ACCTTCCTGAACAGATGAAC+GGG | 0.447587 | 8.4:-11979872 | MS.gene78247:CDS |
| TGATTTGTTGCGTCCAAAGA+AGG | 0.465747 | 8.4:-11983375 | MS.gene78247:CDS |
| GACCACACGTTGAAGAAGAA+TGG | 0.467862 | 8.4:-11983632 | MS.gene78247:CDS |
| TGGACTACTCAAAAGAAATT+GGG | 0.476164 | 8.4:-11981309 | MS.gene78247:CDS |
| GCATTGGTGGTTAACGGTGG+TGG | 0.478666 | 8.4:+11983962 | None:intergenic |
| TTAACCATAAACCTGGCCTT+AGG | 0.479553 | 8.4:+11982974 | None:intergenic |
| GCAAAATGTTTCGGTGCCTA+AGG | 0.486727 | 8.4:-11982990 | MS.gene78247:CDS |
| CAGTATCTTGATTCACTGAA+AGG | 0.486962 | 8.4:-11981096 | MS.gene78247:CDS |
| AGGAATTGACACAGAAGTGC+TGG | 0.489471 | 8.4:-11981076 | MS.gene78247:CDS |
| ACAGTGGCATTGGTGGTTAA+CGG | 0.490877 | 8.4:+11983956 | None:intergenic |
| ATGTTTCGGTGCCTAAGGCC+AGG | 0.492932 | 8.4:-11982985 | MS.gene78247:CDS |
| AAGGTTGAGGTTGTGAATGG+TGG | 0.494421 | 8.4:-11983590 | MS.gene78247:CDS |
| TCTGGAAACAGTGGCATTGG+TGG | 0.495630 | 8.4:+11983949 | None:intergenic |
| GATGCTGGAGAATTGGGAAA+TGG | 0.495739 | 8.4:+11984025 | None:intergenic |
| CTATTCACCAGCGGATCCAT+TGG | 0.510190 | 8.4:-11981155 | MS.gene78247:CDS |
| CACAGAAGTGCTGGAAGTGC+TGG | 0.510690 | 8.4:-11981067 | MS.gene78247:intron |
| CTTAGCTGTTATCAATAAGA+AGG | 0.518552 | 8.4:-11981130 | MS.gene78247:CDS |
| AATTCTGGAAACAGTGGCAT+TGG | 0.522612 | 8.4:+11983946 | None:intergenic |
| TCAACGGAGAGCCAGCGATA+AGG | 0.525932 | 8.4:+11984058 | None:intergenic |
| CCGGAAAACGCCCTTATCGC+TGG | 0.526983 | 8.4:-11984069 | MS.gene78247:CDS |
| TTACTTTATCACATTCATGT+AGG | 0.528837 | 8.4:+11981280 | None:intergenic |
| TTGTTTGGATAATAAGGTTG+AGG | 0.533706 | 8.4:-11983603 | MS.gene78247:CDS |
| ATTACAAATCAGTGAGGAGA+TGG | 0.535794 | 8.4:-11981329 | MS.gene78247:CDS |
| TACAAAAGAGGAAGAAGTTG+AGG | 0.540820 | 8.4:-11983167 | MS.gene78247:CDS |
| AGAGGAACAAAAGGTTCCCT+TGG | 0.542394 | 8.4:+11983190 | None:intergenic |
| CCCTCTCTTTCAACAACTCA+AGG | 0.545252 | 8.4:+11982803 | None:intergenic |
| CTAAGCACCAATGGATCCGC+TGG | 0.549652 | 8.4:+11981148 | None:intergenic |
| TGATAACAGCTAAGCACCAA+TGG | 0.552962 | 8.4:+11981139 | None:intergenic |
| AATAAGGTTGAGGTTGTGAA+TGG | 0.554915 | 8.4:-11983593 | MS.gene78247:CDS |
| TTGAGGCTGTTGATAAGCGA+GGG | 0.558582 | 8.4:-11983457 | MS.gene78247:CDS |
| CCTTGAGTTGTTGAAAGAGA+GGG | 0.568969 | 8.4:-11982803 | MS.gene78247:CDS |
| GATGAAGTGAAGGACAAGAC+TGG | 0.569563 | 8.4:-11979939 | MS.gene78247:CDS |
| GGTTGATGCTGCAAAGATGT+TGG | 0.573236 | 8.4:-11983540 | MS.gene78247:CDS |
| ACCTTGAGTTGTTGAAAGAG+AGG | 0.577475 | 8.4:-11982804 | MS.gene78247:CDS |
| AACCATTCTTCTTCAACGTG+TGG | 0.578501 | 8.4:+11983630 | None:intergenic |
| AAATGGACGGTTGTGATCAA+CGG | 0.583963 | 8.4:+11984042 | None:intergenic |
| AGGTTGAGGTTGTGAATGGT+GGG | 0.591031 | 8.4:-11983589 | MS.gene78247:CDS |
| CTTGAGGCTGTTGATAAGCG+AGG | 0.592351 | 8.4:-11983458 | MS.gene78247:CDS |
| TTCAGCTTAATGAAAAGCGC+AGG | 0.595029 | 8.4:-11983406 | MS.gene78247:CDS |
| GACCTTCCTGAACAGATGAA+CGG | 0.595781 | 8.4:-11979873 | MS.gene78247:CDS |
| TCATCGTTTAACCATAAACC+TGG | 0.601097 | 8.4:+11982967 | None:intergenic |
| TCCAAAGAAGGAATTAGTTG+AGG | 0.602320 | 8.4:-11983363 | MS.gene78247:intron |
| TGCTTACAAGAAGTTGCTTG+AGG | 0.604509 | 8.4:-11983474 | MS.gene78247:CDS |
| ATGGCTTTCAGGAAGTGCCA+AGG | 0.610342 | 8.4:-11983207 | MS.gene78247:intron |
| TTGCGCGGTCTACTACTACA+TGG | 0.610691 | 8.4:+11983875 | None:intergenic |
| TGGCTTTCAGGAAGTGCCAA+GGG | 0.623774 | 8.4:-11983206 | MS.gene78247:intron |
| CTCTTATAGAGAAAAGGGAA+AGG | 0.629786 | 8.4:-11983735 | MS.gene78247:CDS |
| AGGTTTATGGTTAAACGATG+AGG | 0.636211 | 8.4:-11982965 | MS.gene78247:intron |
| GCATGAATTTCTCTACGCAA+AGG | 0.636731 | 8.4:+11983899 | None:intergenic |
| TGACATTTCAGAAACTTGTG+TGG | 0.642554 | 8.4:+11982769 | None:intergenic |
| TGAATTTCTCTACGCAAAGG+TGG | 0.645648 | 8.4:+11983902 | None:intergenic |
| GCTATCATAACACATCTCAC+CGG | 0.646662 | 8.4:-11984088 | MS.gene78247:CDS |
| GATAAGCGAGGGGATACACT+TGG | 0.649380 | 8.4:-11983446 | MS.gene78247:CDS |
| CTTCTTGTAAGCACAAACAC+CGG | 0.649797 | 8.4:+11983484 | None:intergenic |
| ACCCGTTCATCTGTTCAGGA+AGG | 0.656409 | 8.4:+11979871 | None:intergenic |
| ACGAGAAATTCTGGAAACAG+TGG | 0.658340 | 8.4:+11983940 | None:intergenic |
| GTTGATAAATCGAATTTGCG+CGG | 0.668061 | 8.4:+11983860 | None:intergenic |
| TATTTGTACCTATTCACCAG+CGG | 0.679102 | 8.4:-11981164 | MS.gene78247:CDS |
| CTGGAGAATTGGGAAATGGA+CGG | 0.680864 | 8.4:+11984029 | None:intergenic |
| TGTAGAAGAATTGCTGTCTG+TGG | 0.692470 | 8.4:-11983660 | MS.gene78247:CDS |
| AGCGAGGGGATACACTTGGT+AGG | 0.692775 | 8.4:-11983442 | MS.gene78247:CDS |
| TGAGGCTGTTGATAAGCGAG+GGG | 0.694085 | 8.4:-11983456 | MS.gene78247:CDS |
| TGGACGCAACAAATCAAATG+CGG | 0.702476 | 8.4:+11983382 | None:intergenic |
| GTGGCATTGGTGGTTAACGG+TGG | 0.732937 | 8.4:+11983959 | None:intergenic |
| GTTATGATTACAAATCAGTG+AGG | 0.738606 | 8.4:-11981335 | MS.gene78247:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAAAAATAATCAAATAT+CGG | - | chr8.4:11982174-11982193 | MS.gene78247:intron | 10.0% |
| !!! | ATACAAAATGTTTTAAAAAT+AGG | + | chr8.4:11981860-11981879 | None:intergenic | 10.0% |
| !!! | TACAAAATGTTTTAAAAATA+GGG | + | chr8.4:11981859-11981878 | None:intergenic | 10.0% |
| !!! | TATTTTTAAAACATTTTGTA+TGG | - | chr8.4:11981859-11981878 | MS.gene78247:intron | 10.0% |
| !!! | TTTTATTAACCTTATAAAAT+GGG | - | chr8.4:11981242-11981261 | MS.gene78247:intron | 10.0% |
| !!! | TTTTATTATAACCAATTAAT+GGG | - | chr8.4:11982722-11982741 | MS.gene78247:intron | 10.0% |
| !!! | TTTTTATTAACCTTATAAAA+TGG | - | chr8.4:11981241-11981260 | MS.gene78247:intron | 10.0% |
| !!! | TTTTTATTATAACCAATTAA+TGG | - | chr8.4:11982721-11982740 | MS.gene78247:intron | 10.0% |
| !! | AAAGGAAAAAGATAATATTA+AGG | - | chr8.4:11980234-11980253 | MS.gene78247:intron | 15.0% |
| !! | CTAAAATCAATTTAGAAATT+TGG | + | chr8.4:11981888-11981907 | None:intergenic | 15.0% |
| !!! | ATGTTTTATAGATTTCTTTT+AGG | - | chr8.4:11981319-11981338 | MS.gene78247:CDS | 15.0% |
| !!! | TGTATGATAATTATTTTCAT+TGG | - | chr8.4:11983675-11983694 | MS.gene78247:CDS | 15.0% |
| !! | AACATCACTTAATATGAAAT+AGG | - | chr8.4:11983174-11983193 | MS.gene78247:CDS | 20.0% |
| !! | AATGACAAATAATATAAGAC+AGG | + | chr8.4:11982968-11982987 | None:intergenic | 20.0% |
| !! | ATAAGAAGTAATACTTTCTA+TGG | + | chr8.4:11981439-11981458 | None:intergenic | 20.0% |
| !! | CATAAAACAAAAGAAAATAG+AGG | + | chr8.4:11981977-11981996 | None:intergenic | 20.0% |
| !! | CATAAGTAAAAGTAAAAACA+AGG | + | chr8.4:11983755-11983774 | None:intergenic | 20.0% |
| !! | TAAGAAGTAATACTTTCTAT+GGG | + | chr8.4:11981438-11981457 | None:intergenic | 20.0% |
| !! | TATGTATTCACGTATATATA+GGG | + | chr8.4:11981639-11981658 | None:intergenic | 20.0% |
| !! | TATTGAACTATAACATTATC+TGG | - | chr8.4:11981064-11981083 | MS.gene78247:intron | 20.0% |
| !! | TTAGAATACAAAATTACCTT+TGG | - | chr8.4:11982988-11983007 | MS.gene78247:CDS | 20.0% |
| !! | TTCATATTAAGTGATGTTTA+AGG | + | chr8.4:11983172-11983191 | None:intergenic | 20.0% |
| !! | TTTCAACTAAAATCAAATAG+CGG | + | chr8.4:11981823-11981842 | None:intergenic | 20.0% |
| !!! | AAATTGATTTTAGTGCATTT+TGG | - | chr8.4:11981895-11981914 | MS.gene78247:intron | 20.0% |
| !!! | AATTGATTTTAGTGCATTTT+GGG | - | chr8.4:11981896-11981915 | MS.gene78247:intron | 20.0% |
| !!! | ACAATAAATAGAAGTATTAG+TGG | + | chr8.4:11983032-11983051 | None:intergenic | 20.0% |
| !!! | CAATACCTTTTTCTATAAAA+AGG | - | chr8.4:11981211-11981230 | MS.gene78247:intron | 20.0% |
| !!! | CACTTCATTTTAAATCTTTA+TGG | - | chr8.4:11983299-11983318 | MS.gene78247:intron | 20.0% |
| !!! | CTCTATTTTCTTTTGTTTTA+TGG | - | chr8.4:11981975-11981994 | MS.gene78247:intron | 20.0% |
| !!! | TTATTTCTCATTAGAATAGT+GGG | - | chr8.4:11983415-11983434 | MS.gene78247:CDS | 20.0% |
| !!! | TTTATTTCTCATTAGAATAG+TGG | - | chr8.4:11983414-11983433 | MS.gene78247:CDS | 20.0% |
| !!! | TTTTAAAAATAGGGTCAATT+TGG | + | chr8.4:11981850-11981869 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTTCAAACTTGT+TGG | - | chr8.4:11983631-11983650 | MS.gene78247:CDS | 20.0% |
| ! | AAATACAAATTATCTACGTG+TGG | + | chr8.4:11980633-11980652 | None:intergenic | 25.0% |
| ! | AAATCCAATATTGAGATATC+AGG | - | chr8.4:11980939-11980958 | MS.gene78247:intron | 25.0% |
| ! | AAATGTAACTAATACTCCAA+AGG | + | chr8.4:11983007-11983026 | None:intergenic | 25.0% |
| ! | AATACAAATTATCTACGTGT+GGG | + | chr8.4:11980632-11980651 | None:intergenic | 25.0% |
| ! | ACTAACTACTTCATTGATAA+AGG | - | chr8.4:11983075-11983094 | MS.gene78247:intron | 25.0% |
| ! | ACTATCTCTTATAGAGAAAA+GGG | - | chr8.4:11980211-11980230 | MS.gene78247:intron | 25.0% |
| ! | AGAAATAAATCACACTGTAT+TGG | + | chr8.4:11983403-11983422 | None:intergenic | 25.0% |
| ! | AGTTAAGGTGATAAAACAAA+AGG | + | chr8.4:11983376-11983395 | None:intergenic | 25.0% |
| ! | ATATTGCTTTATAAAAGTGG+TGG | - | chr8.4:11983225-11983244 | MS.gene78247:intron | 25.0% |
| ! | ATCAGAATCATCAAATTTGA+TGG | - | chr8.4:11980126-11980145 | MS.gene78247:intron | 25.0% |
| ! | CAAACCAAACAAATATGATT+TGG | - | chr8.4:11983811-11983830 | MS.gene78247:CDS | 25.0% |
| ! | CAAACCAAATCATATTTGTT+TGG | + | chr8.4:11983818-11983837 | None:intergenic | 25.0% |
| ! | CAGTTAATAAACAGCAAAAA+TGG | - | chr8.4:11982594-11982613 | MS.gene78247:intron | 25.0% |
| ! | CTGTTTATTAACTGTTTCAT+TGG | + | chr8.4:11982588-11982607 | None:intergenic | 25.0% |
| ! | GGAAGTCATAAAAGTTTATT+CGG | - | chr8.4:11983246-11983265 | MS.gene78247:intron | 25.0% |
| ! | GTATGTATTCACGTATATAT+AGG | + | chr8.4:11981640-11981659 | None:intergenic | 25.0% |
| ! | GTTAAGGTGATAAAACAAAA+GGG | + | chr8.4:11983375-11983394 | None:intergenic | 25.0% |
| ! | TAAAAAATCAGCCCATTAAT+TGG | + | chr8.4:11982736-11982755 | None:intergenic | 25.0% |
| ! | TACATATACTTGCATAGATA+TGG | - | chr8.4:11982291-11982310 | MS.gene78247:intron | 25.0% |
| ! | TACTATCTCTTATAGAGAAA+AGG | - | chr8.4:11980210-11980229 | MS.gene78247:intron | 25.0% |
| ! | TAGCCAATCCTTTAATAATT+GGG | - | chr8.4:11981517-11981536 | MS.gene78247:intron | 25.0% |
| ! | TATTAACCTTATAAAATGGG+CGG | - | chr8.4:11981245-11981264 | MS.gene78247:intron | 25.0% |
| ! | TGCATATTGCTTTATAAAAG+TGG | - | chr8.4:11983222-11983241 | MS.gene78247:intron | 25.0% |
| ! | TGCTTATTGTTGAATTTATG+TGG | - | chr8.4:11981027-11981046 | MS.gene78247:intron | 25.0% |
| ! | TTACTTTATCACATTCATGT+AGG | + | chr8.4:11982674-11982693 | None:intergenic | 25.0% |
| ! | TTTATCAATGAAGTAGTTAG+TGG | + | chr8.4:11983076-11983095 | None:intergenic | 25.0% |
| ! | TTTCAATGCAGAACATTTAA+AGG | + | chr8.4:11981403-11981422 | None:intergenic | 25.0% |
| !! | CACTACCTTTTTATAGAAAA+AGG | + | chr8.4:11981219-11981238 | None:intergenic | 25.0% |
| !! | CTTTTACTTATGTTGTTAGT+TGG | - | chr8.4:11983763-11983782 | MS.gene78247:CDS | 25.0% |
| !! | TTTTTCCATTAACTCATTAG+TGG | + | chr8.4:11980161-11980180 | None:intergenic | 25.0% |
| !!! | ATTGATTTTAGTGCATTTTG+GGG | - | chr8.4:11981897-11981916 | MS.gene78247:intron | 25.0% |
| !!! | CAAACAAATATGATTTGGTT+TGG | - | chr8.4:11983816-11983835 | MS.gene78247:CDS | 25.0% |
| !!! | TTCCTCTATCTTTTGTTTTT+TGG | - | chr8.4:11982031-11982050 | MS.gene78247:intron | 25.0% |
| !!! | TTTGGTTTGTTTGGATAATA+AGG | - | chr8.4:11980342-11980361 | MS.gene78247:intron | 25.0% |
| !!! | TTTTTTTATTAATGTCTCCC+AGG | - | chr8.4:11983975-11983994 | MS.gene78247:CDS | 25.0% |
| AAGCAAATCAAATCAAACCT+GGG | - | chr8.4:11983467-11983486 | MS.gene78247:CDS | 30.0% | |
| AATCAAATAAGTTCAGCATC+CGG | - | chr8.4:11981493-11981512 | MS.gene78247:intron | 30.0% | |
| ACATACATAGTAGTTAAGAG+CGG | - | chr8.4:11981654-11981673 | MS.gene78247:intron | 30.0% | |
| ACTCAAAAGAAATTGGGATA+TGG | - | chr8.4:11982648-11982667 | MS.gene78247:intron | 30.0% | |
| AGATAAAACACATAACATGC+AGG | + | chr8.4:11982500-11982519 | None:intergenic | 30.0% | |
| AGATATCAGGCAAAATGTTT+CGG | - | chr8.4:11980952-11980971 | MS.gene78247:intron | 30.0% | |
| ATACAAATTATCTACGTGTG+GGG | + | chr8.4:11980631-11980650 | None:intergenic | 30.0% | |
| CAAATATGTGACACTTGATA+TGG | + | chr8.4:11982945-11982964 | None:intergenic | 30.0% | |
| CACCAAAAAACAAAAGATAG+AGG | + | chr8.4:11982036-11982055 | None:intergenic | 30.0% | |
| CACGTATATATAGGGAATTT+GGG | + | chr8.4:11981631-11981650 | None:intergenic | 30.0% | |
| CACTGTATTGGATATAGTTA+AGG | + | chr8.4:11983391-11983410 | None:intergenic | 30.0% | |
| CCAAATTGACTATGTTTGTA+TGG | - | chr8.4:11981930-11981949 | MS.gene78247:intron | 30.0% | |
| CCATACAAACATAGTCAATT+TGG | + | chr8.4:11981933-11981952 | None:intergenic | 30.0% | |
| CTTAGCTGTTATCAATAAGA+AGG | - | chr8.4:11982821-11982840 | MS.gene78247:intron | 30.0% | |
| GATAAAACACATAACATGCA+GGG | + | chr8.4:11982499-11982518 | None:intergenic | 30.0% | |
| GTAGCCAATCCTTTAATAAT+TGG | - | chr8.4:11981516-11981535 | MS.gene78247:intron | 30.0% | |
| GTATTCATAGTAGTCAATCT+CGG | + | chr8.4:11982274-11982293 | None:intergenic | 30.0% | |
| GTGAATAGGTACAAATATCT+GGG | + | chr8.4:11982784-11982803 | None:intergenic | 30.0% | |
| GTTATGATTACAAATCAGTG+AGG | - | chr8.4:11982616-11982635 | MS.gene78247:intron | 30.0% | |
| TCACGTATATATAGGGAATT+TGG | + | chr8.4:11981632-11981651 | None:intergenic | 30.0% | |
| TGAATCATCTAAGTGTCAAA+TGG | + | chr8.4:11983608-11983627 | None:intergenic | 30.0% | |
| TGATACCACTAATGAGTTAA+TGG | - | chr8.4:11980153-11980172 | MS.gene78247:intron | 30.0% | |
| TGGACTACTCAAAAGAAATT+GGG | - | chr8.4:11982642-11982661 | MS.gene78247:intron | 30.0% | |
| TTGTTTGGATAATAAGGTTG+AGG | - | chr8.4:11980348-11980367 | MS.gene78247:intron | 30.0% | |
| TTTGCCTGATATCTCAATAT+TGG | + | chr8.4:11980946-11980965 | None:intergenic | 30.0% | |
| ! | AAATTAAGTCTGGAATGAGA+TGG | + | chr8.4:11983898-11983917 | None:intergenic | 30.0% |
| ! | AAGATGTTGACATTAGTTCT+TGG | - | chr8.4:11984037-11984056 | MS.gene78247:CDS | 30.0% |
| ! | AATTTTCAAAGCATACTGGT+TGG | + | chr8.4:11980828-11980847 | None:intergenic | 30.0% |
| ! | AGATGTTGACATTAGTTCTT+GGG | - | chr8.4:11984038-11984057 | MS.gene78247:CDS | 30.0% |
| ! | ATCTTGTGTTTTATCTTTGC+AGG | - | chr8.4:11981112-11981131 | MS.gene78247:CDS | 30.0% |
| ! | ATGGACTACTCAAAAGAAAT+TGG | - | chr8.4:11982641-11982660 | MS.gene78247:intron | 30.0% |
| ! | CATTCCAGACTTAATTTGAT+CGG | - | chr8.4:11983901-11983920 | MS.gene78247:CDS | 30.0% |
| ! | GTATTTTGTAGATGAAGTGA+AGG | - | chr8.4:11984002-11984021 | MS.gene78247:CDS | 30.0% |
| ! | TCTTTTGTAAGAGGAACAAA+AGG | + | chr8.4:11980773-11980792 | None:intergenic | 30.0% |
| ! | TGAACGGGTTTGTAATTTAA+TGG | - | chr8.4:11984094-11984113 | MS.gene78247:CDS | 30.0% |
| ! | TGTTGATGTTTTCTGTCTTT+TGG | + | chr8.4:11979951-11979970 | None:intergenic | 30.0% |
| ! | TTTTGTTCCTCTTACAAAAG+AGG | - | chr8.4:11980772-11980791 | MS.gene78247:intron | 30.0% |
| !! | AACTTGTTGGAATTTACTTC+TGG | - | chr8.4:11983644-11983663 | MS.gene78247:CDS | 30.0% |
| !! | AATTTGGCTATGTGCTATTT+AGG | - | chr8.4:11980844-11980863 | MS.gene78247:intron | 30.0% |
| !! | ACCAGTATGCTTTGAAAATT+TGG | - | chr8.4:11980828-11980847 | MS.gene78247:intron | 30.0% |
| !!! | GACTTTTGTTTTGAACAAAC+AGG | - | chr8.4:11981575-11981594 | MS.gene78247:intron | 30.0% |
| AAACATGCCTCAAAAGCTTA+AGG | + | chr8.4:11981305-11981324 | None:intergenic | 35.0% | |
| AAATCAAATAGCGGTTGAAG+CGG | + | chr8.4:11981814-11981833 | None:intergenic | 35.0% | |
| AACAAACCATCGATCAGATA+TGG | + | chr8.4:11980887-11980906 | None:intergenic | 35.0% | |
| AATAAGGTTGAGGTTGTGAA+TGG | - | chr8.4:11980358-11980377 | MS.gene78247:intron | 35.0% | |
| ACCTCAACTAATTCCTTCTT+TGG | + | chr8.4:11980592-11980611 | None:intergenic | 35.0% | |
| AGAAAAGGAAGATCTAAGGA+GGG | + | chr8.4:11982339-11982358 | None:intergenic | 35.0% | |
| AGGTTTATGGTTAAACGATG+AGG | - | chr8.4:11980986-11981005 | MS.gene78247:intron | 35.0% | |
| AGTACGAAGAATGATCTTTC+CGG | - | chr8.4:11980448-11980467 | MS.gene78247:intron | 35.0% | |
| AGTCAACAGAAACAAAAGCT+TGG | + | chr8.4:11981559-11981578 | None:intergenic | 35.0% | |
| ATCAAATAAGTTCAGCATCC+GGG | - | chr8.4:11981494-11981513 | MS.gene78247:intron | 35.0% | |
| ATCCTTTAATAATTGGGAGC+CGG | - | chr8.4:11981523-11981542 | MS.gene78247:intron | 35.0% | |
| ATCTACAAAATACCTTGCCT+GGG | + | chr8.4:11983995-11984014 | None:intergenic | 35.0% | |
| ATTACAAATCAGTGAGGAGA+TGG | - | chr8.4:11982622-11982641 | MS.gene78247:intron | 35.0% | |
| CAAGAGAAAAGGAAGATCTA+AGG | + | chr8.4:11982343-11982362 | None:intergenic | 35.0% | |
| CACAAGATAACTCAACTTCA+TGG | + | chr8.4:11981100-11981119 | None:intergenic | 35.0% | |
| CAGTATCTTGATTCACTGAA+AGG | - | chr8.4:11982855-11982874 | MS.gene78247:intron | 35.0% | |
| CATAGAAAGCAACATACTGT+TGG | - | chr8.4:11981354-11981373 | MS.gene78247:CDS | 35.0% | |
| CTCTTATAGAGAAAAGGGAA+AGG | - | chr8.4:11980216-11980235 | MS.gene78247:intron | 35.0% | |
| GAAGCAAATCAAATCAAACC+TGG | - | chr8.4:11983466-11983485 | MS.gene78247:CDS | 35.0% | |
| GACTCAGTTTGATCATTGAT+CGG | - | chr8.4:11983534-11983553 | MS.gene78247:CDS | 35.0% | |
| GCTCCCAATTATTAAAGGAT+TGG | + | chr8.4:11981523-11981542 | None:intergenic | 35.0% | |
| GGTGAATAGGTACAAATATC+TGG | + | chr8.4:11982785-11982804 | None:intergenic | 35.0% | |
| GTTTCCGATCAAATTAAGTC+TGG | + | chr8.4:11983908-11983927 | None:intergenic | 35.0% | |
| TAACTGACAAAGTCTTGCTA+TGG | - | chr8.4:11980725-11980744 | MS.gene78247:intron | 35.0% | |
| TACAAAAGAGGAAGAAGTTG+AGG | - | chr8.4:11980784-11980803 | MS.gene78247:intron | 35.0% | |
| TATAGCGGTATGACAAATAG+CGG | + | chr8.4:11982203-11982222 | None:intergenic | 35.0% | |
| TATTTGTACCTATTCACCAG+CGG | - | chr8.4:11982787-11982806 | MS.gene78247:CDS | 35.0% | |
| TCATCGTTTAACCATAAACC+TGG | + | chr8.4:11980987-11981006 | None:intergenic | 35.0% | |
| TCCAAAGAAGGAATTAGTTG+AGG | - | chr8.4:11980588-11980607 | MS.gene78247:intron | 35.0% | |
| TGACATTTCAGAAACTTGTG+TGG | + | chr8.4:11981185-11981204 | None:intergenic | 35.0% | |
| ! | ACTTCTTCCTCTTTTGTAAG+AGG | + | chr8.4:11980782-11980801 | None:intergenic | 35.0% |
| ! | GCCAAATTTTCAAAGCATAC+TGG | + | chr8.4:11980832-11980851 | None:intergenic | 35.0% |
| ! | GTTGATAAATCGAATTTGCG+CGG | + | chr8.4:11980094-11980113 | None:intergenic | 35.0% |
| ! | TTTGGGATAACGAGAAATTC+TGG | + | chr8.4:11980023-11980042 | None:intergenic | 35.0% |
| !! | AATATGATTTGGTTTGGTCC+AGG | - | chr8.4:11983822-11983841 | MS.gene78247:CDS | 35.0% |
| !! | ATGTTGTTAGTTGGTCTTGT+TGG | - | chr8.4:11983772-11983791 | MS.gene78247:CDS | 35.0% |
| !! | GAAGAATGGTTTGGTTTGTT+TGG | - | chr8.4:11980333-11980352 | MS.gene78247:intron | 35.0% |
| !! | GGTTTGTTTCTACAGGAATA+AGG | - | chr8.4:11980899-11980918 | MS.gene78247:intron | 35.0% |
| !! | TCATTAGAATAGTGGGTCAA+TGG | - | chr8.4:11983422-11983441 | MS.gene78247:CDS | 35.0% |
| !! | TTATTAAAGGATTGGCTACC+CGG | + | chr8.4:11981515-11981534 | None:intergenic | 35.0% |
| !!! | GGAAGTGCTGGTAATATTTT+TGG | - | chr8.4:11982896-11982915 | MS.gene78247:intron | 35.0% |
| AAATGGACGGTTGTGATCAA+CGG | + | chr8.4:11979912-11979931 | None:intergenic | 40.0% | |
| AACCATTCTTCTTCAACGTG+TGG | + | chr8.4:11980324-11980343 | None:intergenic | 40.0% | |
| AATATCTGGGAACGACAAGT+CGG | + | chr8.4:11982771-11982790 | None:intergenic | 40.0% | |
| AGTGTCAAATGGTCAACAGA+TGG | + | chr8.4:11983597-11983616 | None:intergenic | 40.0% | |
| CACGTTGAAGAAGAATGGTT+TGG | - | chr8.4:11980324-11980343 | MS.gene78247:intron | 40.0% | |
| CATCTACAAAATACCTTGCC+TGG | + | chr8.4:11983996-11984015 | None:intergenic | 40.0% | |
| CTCAAAAGCTTAAGGAATCC+CGG | + | chr8.4:11981297-11981316 | None:intergenic | 40.0% | |
| CTTATGCTTTGACAACAGAG+TGG | + | chr8.4:11980685-11980704 | None:intergenic | 40.0% | |
| CTTCTTGTAAGCACAAACAC+CGG | + | chr8.4:11980470-11980489 | None:intergenic | 40.0% | |
| GAGAAAAGGAAGATCTAAGG+AGG | + | chr8.4:11982340-11982359 | None:intergenic | 40.0% | |
| GCATGAATTTCTCTACGCAA+AGG | + | chr8.4:11980055-11980074 | None:intergenic | 40.0% | |
| GCTATCATAACACATCTCAC+CGG | - | chr8.4:11979863-11979882 | MS.gene78247:CDS | 40.0% | |
| GTTGTACCATATCTGATCGA+TGG | - | chr8.4:11980878-11980897 | MS.gene78247:intron | 40.0% | |
| TAGTGGAGCTATTAGAGTGA+CGG | + | chr8.4:11983059-11983078 | None:intergenic | 40.0% | |
| TGAATTTCTCTACGCAAAGG+TGG | + | chr8.4:11980052-11980071 | None:intergenic | 40.0% | |
| TGATAACAGCTAAGCACCAA+TGG | + | chr8.4:11982815-11982834 | None:intergenic | 40.0% | |
| TGCTTACAAGAAGTTGCTTG+AGG | - | chr8.4:11980477-11980496 | MS.gene78247:intron | 40.0% | |
| TGGACGCAACAAATCAAATG+CGG | + | chr8.4:11980572-11980591 | None:intergenic | 40.0% | |
| TGTAGAAGAATTGCTGTCTG+TGG | - | chr8.4:11980291-11980310 | MS.gene78247:intron | 40.0% | |
| TGTGAACTACATGAAGCAGT+GGG | + | chr8.4:11982395-11982414 | None:intergenic | 40.0% | |
| TTATTAATGTCTCCCAGGCA+AGG | - | chr8.4:11983980-11983999 | MS.gene78247:CDS | 40.0% | |
| ! | AAAGTCTTGCTATGGCTTTC+AGG | - | chr8.4:11980733-11980752 | MS.gene78247:intron | 40.0% |
| ! | AACCGGCTCCCAATTATTAA+AGG | + | chr8.4:11981528-11981547 | None:intergenic | 40.0% |
| ! | AATTCTGGAAACAGTGGCAT+TGG | + | chr8.4:11980008-11980027 | None:intergenic | 40.0% |
| ! | ACCTTGAGTTGTTGAAAGAG+AGG | - | chr8.4:11981147-11981166 | MS.gene78247:CDS | 40.0% |
| ! | ACGAGAAATTCTGGAAACAG+TGG | + | chr8.4:11980014-11980033 | None:intergenic | 40.0% |
| ! | CAAACACCGCCCATTTTATA+AGG | + | chr8.4:11981254-11981273 | None:intergenic | 40.0% |
| ! | CCTTGAGTTGTTGAAAGAGA+GGG | - | chr8.4:11981148-11981167 | MS.gene78247:CDS | 40.0% |
| ! | CTTTTGGATGCTGGAGAATT+GGG | + | chr8.4:11979935-11979954 | None:intergenic | 40.0% |
| ! | GTTTTCTGTCTTTTGGATGC+TGG | + | chr8.4:11979944-11979963 | None:intergenic | 40.0% |
| ! | TCTTTTGGATGCTGGAGAAT+TGG | + | chr8.4:11979936-11979955 | None:intergenic | 40.0% |
| ! | TTAACCATAAACCTGGCCTT+AGG | + | chr8.4:11980980-11980999 | None:intergenic | 40.0% |
| ! | TTCAGCTTAATGAAAAGCGC+AGG | - | chr8.4:11980545-11980564 | MS.gene78247:intron | 40.0% |
| !! | ACATGACGTTGACTTACTTG+TGG | - | chr8.4:11983716-11983735 | MS.gene78247:CDS | 40.0% |
| !! | GATCGATGGTTTGTTTCTAC+AGG | - | chr8.4:11980892-11980911 | MS.gene78247:intron | 40.0% |
| !! | TGATTTGTTGCGTCCAAAGA+AGG | - | chr8.4:11980576-11980595 | MS.gene78247:intron | 40.0% |
| AAAAGCTTAAGGAATCCCGG+TGG | + | chr8.4:11981294-11981313 | None:intergenic | 45.0% | |
| AAGGTTGAGGTTGTGAATGG+TGG | - | chr8.4:11980361-11980380 | MS.gene78247:intron | 45.0% | |
| ACAAACCCGTTCATCTGTTC+AGG | + | chr8.4:11984087-11984106 | None:intergenic | 45.0% | |
| ACAACATCTTGCATGATCCC+AGG | + | chr8.4:11983487-11983506 | None:intergenic | 45.0% | |
| ACAGAAACAAAAGCTTGGCG+AGG | + | chr8.4:11981554-11981573 | None:intergenic | 45.0% | |
| ACCTTCCTGAACAGATGAAC+GGG | - | chr8.4:11984079-11984098 | MS.gene78247:CDS | 45.0% | |
| AGAGGAACAAAAGGTTCCCT+TGG | + | chr8.4:11980764-11980783 | None:intergenic | 45.0% | |
| AGGTTGAGGTTGTGAATGGT+GGG | - | chr8.4:11980362-11980381 | MS.gene78247:intron | 45.0% | |
| CAGTTGTTTGTCCAGTTTCC+AGG | - | chr8.4:11983571-11983590 | MS.gene78247:CDS | 45.0% | |
| CCCTCTCTTTCAACAACTCA+AGG | + | chr8.4:11981151-11981170 | None:intergenic | 45.0% | |
| CTGGAGAATTGGGAAATGGA+CGG | + | chr8.4:11979925-11979944 | None:intergenic | 45.0% | |
| GACCACACGTTGAAGAAGAA+TGG | - | chr8.4:11980319-11980338 | MS.gene78247:intron | 45.0% | |
| GACCTTCCTGAACAGATGAA+CGG | - | chr8.4:11984078-11984097 | MS.gene78247:CDS | 45.0% | |
| GATGAAGTGAAGGACAAGAC+TGG | - | chr8.4:11984012-11984031 | MS.gene78247:CDS | 45.0% | |
| GATGCTGGAGAATTGGGAAA+TGG | + | chr8.4:11979929-11979948 | None:intergenic | 45.0% | |
| GCAACAGTCAGCTTCATCTA+TGG | - | chr8.4:11980390-11980409 | MS.gene78247:intron | 45.0% | |
| GTGTGAACTACATGAAGCAG+TGG | + | chr8.4:11982396-11982415 | None:intergenic | 45.0% | |
| TAGTAGTCAATCTCGGAGAG+CGG | + | chr8.4:11982267-11982286 | None:intergenic | 45.0% | |
| TTCTCTACGCAAAGGTGGTT+TGG | + | chr8.4:11980047-11980066 | None:intergenic | 45.0% | |
| ! | AGCATACTGGTTGGCAGAAA+AGG | + | chr8.4:11980819-11980838 | None:intergenic | 45.0% |
| ! | AGGAATTGACACAGAAGTGC+TGG | - | chr8.4:11982875-11982894 | MS.gene78247:intron | 45.0% |
| ! | CGGGATTCCTTAAGCTTTTG+AGG | - | chr8.4:11981295-11981314 | MS.gene78247:CDS | 45.0% |
| ! | GATCTTCCTTTTCTCTTGCG+AGG | - | chr8.4:11982345-11982364 | MS.gene78247:intron | 45.0% |
| ! | GATGTTGTTGCAGAAAGCGT+TGG | - | chr8.4:11983499-11983518 | MS.gene78247:CDS | 45.0% |
| ! | GGTTGATGCTGCAAAGATGT+TGG | - | chr8.4:11980411-11980430 | MS.gene78247:intron | 45.0% |
| ! | TTGAGGCTGTTGATAAGCGA+GGG | - | chr8.4:11980494-11980513 | MS.gene78247:intron | 45.0% |
| !! | ACAGTGGCATTGGTGGTTAA+CGG | + | chr8.4:11979998-11980017 | None:intergenic | 45.0% |
| !! | GCAAAATGTTTCGGTGCCTA+AGG | - | chr8.4:11980961-11980980 | MS.gene78247:intron | 45.0% |
| !!! | ACGCAAAGGTGGTTTGGTTT+TGG | + | chr8.4:11980041-11980060 | None:intergenic | 45.0% |
| !!! | CGCAAAGGTGGTTTGGTTTT+GGG | + | chr8.4:11980040-11980059 | None:intergenic | 45.0% |
| AAAGCTTGGCGAGGAGTAAC+CGG | + | chr8.4:11981545-11981564 | None:intergenic | 50.0% | |
| ACCCGTTCATCTGTTCAGGA+AGG | + | chr8.4:11984083-11984102 | None:intergenic | 50.0% | |
| CAAATGGTCAACAGATGGCC+TGG | + | chr8.4:11983592-11983611 | None:intergenic | 50.0% | |
| CAATGGATCCGCTGGTGAAT+AGG | + | chr8.4:11982798-11982817 | None:intergenic | 50.0% | |
| CACCTCTATAGCAGCAGAAG+CGG | + | chr8.4:11981768-11981787 | None:intergenic | 50.0% | |
| CTATTCACCAGCGGATCCAT+TGG | - | chr8.4:11982796-11982815 | MS.gene78247:CDS | 50.0% | |
| GATAAGCGAGGGGATACACT+TGG | - | chr8.4:11980505-11980524 | MS.gene78247:intron | 50.0% | |
| TAGTTAAGAGCGGCCGATAG+CGG | - | chr8.4:11981664-11981683 | MS.gene78247:intron | 50.0% | |
| TCAACAGATGGCCTGGAAAC+TGG | + | chr8.4:11983585-11983604 | None:intergenic | 50.0% | |
| TCTACGCCTCGCAAGAGAAA+AGG | + | chr8.4:11982354-11982373 | None:intergenic | 50.0% | |
| TCTCTTGCGAGGCGTAGAAA+TGG | - | chr8.4:11982356-11982375 | MS.gene78247:intron | 50.0% | |
| TGCTACGCTAATCGTCGTAG+CGG | - | chr8.4:11981724-11981743 | MS.gene78247:intron | 50.0% | |
| TGGCAAGTGACCATCTTCAG+AGG | + | chr8.4:11983878-11983897 | None:intergenic | 50.0% | |
| TTGCGAGGCGTAGAAATGGA+AGG | - | chr8.4:11982360-11982379 | MS.gene78247:intron | 50.0% | |
| TTGCGCGGTCTACTACTACA+TGG | + | chr8.4:11980079-11980098 | None:intergenic | 50.0% | |
| ! | ACAAAAGCGTGCATGTCCAC+CGG | - | chr8.4:11981275-11981294 | MS.gene78247:intron | 50.0% |
| ! | AGCGGTTCGGAATGAGATAG+CGG | - | chr8.4:11981742-11981761 | MS.gene78247:intron | 50.0% |
| ! | CCATCTTCAGAGGCACACTT+AGG | + | chr8.4:11983868-11983887 | None:intergenic | 50.0% |
| ! | CCTAAGTGTGCCTCTGAAGA+TGG | - | chr8.4:11983865-11983884 | MS.gene78247:CDS | 50.0% |
| ! | CTGCTGCTATAGAGGTGTAG+CGG | - | chr8.4:11981771-11981790 | MS.gene78247:intron | 50.0% |
| ! | CTTGAGGCTGTTGATAAGCG+AGG | - | chr8.4:11980493-11980512 | MS.gene78247:intron | 50.0% |
| ! | TCTGGAAACAGTGGCATTGG+TGG | + | chr8.4:11980005-11980024 | None:intergenic | 50.0% |
| ! | TGAGGCTGTTGATAAGCGAG+GGG | - | chr8.4:11980495-11980514 | MS.gene78247:intron | 50.0% |
| !! | ATGGCTTTCAGGAAGTGCCA+AGG | - | chr8.4:11980744-11980763 | MS.gene78247:intron | 50.0% |
| !! | TATCCCGCTACCCCACTTTT+GGG | - | chr8.4:11982226-11982245 | MS.gene78247:intron | 50.0% |
| !! | TGGCTTTCAGGAAGTGCCAA+GGG | - | chr8.4:11980745-11980764 | MS.gene78247:intron | 50.0% |
| AGCGAGGGGATACACTTGGT+AGG | - | chr8.4:11980509-11980528 | MS.gene78247:intron | 55.0% | |
| CAACGGAGAGCCAGCGATAA+GGG | + | chr8.4:11979895-11979914 | None:intergenic | 55.0% | |
| CGACAAGTCGGCAGCAAATC+AGG | + | chr8.4:11982759-11982778 | None:intergenic | 55.0% | |
| CGCTAATCGTCGTAGCGGTT+CGG | - | chr8.4:11981729-11981748 | MS.gene78247:intron | 55.0% | |
| CTAAGCACCAATGGATCCGC+TGG | + | chr8.4:11982806-11982825 | None:intergenic | 55.0% | |
| GGTGCCTAAGGCCAGGTTTA+TGG | - | chr8.4:11980973-11980992 | MS.gene78247:intron | 55.0% | |
| TCAACGGAGAGCCAGCGATA+AGG | + | chr8.4:11979896-11979915 | None:intergenic | 55.0% | |
| ! | CAAAAGCGTGCATGTCCACC+GGG | - | chr8.4:11981276-11981295 | MS.gene78247:intron | 55.0% |
| ! | CTATCCCGCTACCCCACTTT+TGG | - | chr8.4:11982225-11982244 | MS.gene78247:intron | 55.0% |
| ! | GCATTGGTGGTTAACGGTGG+TGG | + | chr8.4:11979992-11980011 | None:intergenic | 55.0% |
| !! | ATCCCGCTACCCCACTTTTG+GGG | - | chr8.4:11982227-11982246 | MS.gene78247:intron | 55.0% |
| !! | ATGTTTCGGTGCCTAAGGCC+AGG | - | chr8.4:11980966-11980985 | MS.gene78247:intron | 55.0% |
| !! | CACAGAAGTGCTGGAAGTGC+TGG | - | chr8.4:11982884-11982903 | MS.gene78247:intron | 55.0% |
| !! | GGTAGCGGGATAGCGTATAG+CGG | + | chr8.4:11982218-11982237 | None:intergenic | 55.0% |
| !! | GTGGCATTGGTGGTTAACGG+TGG | + | chr8.4:11979995-11980014 | None:intergenic | 55.0% |
| !!! | CCAGCGATAAGGGCGTTTTC+CGG | + | chr8.4:11979885-11979904 | None:intergenic | 55.0% |
| AGCGGTCATGCGTAGCGTAG+CGG | - | chr8.4:11981693-11981712 | MS.gene78247:intron | 60.0% | |
| CCGGAAAACGCCCTTATCGC+TGG | - | chr8.4:11979882-11979901 | MS.gene78247:CDS | 60.0% | |
| CGACCCCAAAAGTGGGGTAG+CGG | + | chr8.4:11982233-11982252 | None:intergenic | 60.0% | |
| GACCCCAAAAGTGGGGTAGC+GGG | + | chr8.4:11982232-11982251 | None:intergenic | 60.0% | |
| GACCGCTATAGCGCCGCTAT+CGG | + | chr8.4:11981680-11981699 | None:intergenic | 60.0% | |
| GGCCGCTTCTGCTGCTATAG+AGG | - | chr8.4:11981763-11981782 | MS.gene78247:intron | 60.0% | |
| TAGCGGAGCAGAGCGGATAG+CGG | - | chr8.4:11981788-11981807 | MS.gene78247:intron | 60.0% | |
| TAGCGGCCGACCCCAAAAGT+GGG | + | chr8.4:11982240-11982259 | None:intergenic | 60.0% | |
| ! | AGAGGTGTAGCGGAGCAGAG+CGG | - | chr8.4:11981781-11981800 | MS.gene78247:intron | 60.0% |
| !!! | CGCTACCCCACTTTTGGGGT+CGG | - | chr8.4:11982231-11982250 | MS.gene78247:intron | 60.0% |
| AGCGGCCGACCCCAAAAGTG+GGG | + | chr8.4:11982239-11982258 | None:intergenic | 65.0% | |
| GTAGCGGCCGACCCCAAAAG+TGG | + | chr8.4:11982241-11982260 | None:intergenic | 65.0% | |
| TCTCGGAGAGCGGTGCGTAG+CGG | + | chr8.4:11982257-11982276 | None:intergenic | 65.0% | |
| ! | GGCCGATAGCGGCGCTATAG+CGG | - | chr8.4:11981675-11981694 | MS.gene78247:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 11979860 | 11984113 | 11979860 | ID=MS.gene78247 |
| chr8.4 | mRNA | 11979860 | 11984113 | 11979860 | ID=MS.gene78247.t1;Parent=MS.gene78247 |
| chr8.4 | exon | 11983364 | 11984113 | 11983364 | ID=MS.gene78247.t1.exon1;Parent=MS.gene78247.t1 |
| chr8.4 | CDS | 11983364 | 11984113 | 11983364 | ID=cds.MS.gene78247.t1;Parent=MS.gene78247.t1 |
| chr8.4 | exon | 11983142 | 11983218 | 11983142 | ID=MS.gene78247.t1.exon2;Parent=MS.gene78247.t1 |
| chr8.4 | CDS | 11983142 | 11983218 | 11983142 | ID=cds.MS.gene78247.t1;Parent=MS.gene78247.t1 |
| chr8.4 | exon | 11982966 | 11983059 | 11982966 | ID=MS.gene78247.t1.exon3;Parent=MS.gene78247.t1 |
| chr8.4 | CDS | 11982966 | 11983059 | 11982966 | ID=cds.MS.gene78247.t1;Parent=MS.gene78247.t1 |
| chr8.4 | exon | 11982741 | 11982839 | 11982741 | ID=MS.gene78247.t1.exon4;Parent=MS.gene78247.t1 |
| chr8.4 | CDS | 11982741 | 11982839 | 11982741 | ID=cds.MS.gene78247.t1;Parent=MS.gene78247.t1 |
| chr8.4 | exon | 11981284 | 11981376 | 11981284 | ID=MS.gene78247.t1.exon5;Parent=MS.gene78247.t1 |
| chr8.4 | CDS | 11981284 | 11981376 | 11981284 | ID=cds.MS.gene78247.t1;Parent=MS.gene78247.t1 |
| chr8.4 | exon | 11981068 | 11981187 | 11981068 | ID=MS.gene78247.t1.exon6;Parent=MS.gene78247.t1 |
| chr8.4 | CDS | 11981068 | 11981187 | 11981068 | ID=cds.MS.gene78247.t1;Parent=MS.gene78247.t1 |
| chr8.4 | exon | 11979860 | 11979976 | 11979860 | ID=MS.gene78247.t1.exon7;Parent=MS.gene78247.t1 |
| chr8.4 | CDS | 11979860 | 11979976 | 11979860 | ID=cds.MS.gene78247.t1;Parent=MS.gene78247.t1 |
| Gene Sequence |
| Protein sequence |
