Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06161.t1 | XP_003630669.1 | 97.6 | 548 | 13 | 0 | 14 | 561 | 4 | 551 | 1.40E-294 | 1021.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06161.t1 | Q9SW96 | 71.2 | 549 | 156 | 1 | 15 | 561 | 24 | 572 | 1.6e-233 | 810.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06161.t1 | G7LJN2 | 97.6 | 548 | 13 | 0 | 14 | 561 | 4 | 551 | 1.0e-294 | 1021.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057884 | MS.gene06161 | PPI |
| MS.gene070492 | MS.gene06161 | PPI |
| MS.gene016742 | MS.gene06161 | PPI |
| MS.gene070510 | MS.gene06161 | PPI |
| MS.gene81622 | MS.gene06161 | PPI |
| MS.gene016743 | MS.gene06161 | PPI |
| MS.gene81617 | MS.gene06161 | PPI |
| MS.gene37911 | MS.gene06161 | PPI |
| MS.gene057883 | MS.gene06161 | PPI |
| MS.gene06161 | MS.gene070511 | PPI |
| MS.gene016758 | MS.gene06161 | PPI |
| MS.gene81620 | MS.gene06161 | PPI |
| MS.gene070505 | MS.gene06161 | PPI |
| MS.gene057886 | MS.gene06161 | PPI |
| MS.gene070509 | MS.gene06161 | PPI |
| MS.gene070503 | MS.gene06161 | PPI |
| MS.gene070507 | MS.gene06161 | PPI |
| MS.gene06161 | MS.gene67840 | PPI |
| MS.gene81615 | MS.gene06161 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06161.t1 | MTR_8g102050 | 97.993 | 548 | 11 | 0 | 14 | 561 | 4 | 551 | 0.0 | 1114 |
| MS.gene06161.t1 | MTR_7g101050 | 88.774 | 579 | 44 | 7 | 1 | 561 | 1 | 576 | 0.0 | 1028 |
| MS.gene06161.t1 | MTR_8g011530 | 46.369 | 537 | 280 | 5 | 25 | 560 | 103 | 632 | 1.72e-169 | 495 |
| MS.gene06161.t1 | MTR_4g100920 | 48.502 | 534 | 202 | 9 | 33 | 561 | 81 | 546 | 3.52e-167 | 486 |
| MS.gene06161.t1 | MTR_4g100920 | 61.453 | 179 | 65 | 2 | 279 | 456 | 266 | 441 | 6.41e-69 | 229 |
| MS.gene06161.t1 | MTR_4g100920 | 47.159 | 176 | 85 | 4 | 33 | 204 | 81 | 252 | 5.28e-43 | 160 |
| MS.gene06161.t1 | MTR_1g014140 | 30.605 | 281 | 175 | 8 | 285 | 558 | 271 | 538 | 1.20e-27 | 117 |
| MS.gene06161.t1 | MTR_5g028360 | 30.605 | 281 | 175 | 9 | 285 | 558 | 319 | 586 | 1.87e-27 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06161.t1 | AT5G56680 | 73.866 | 551 | 142 | 1 | 13 | 561 | 22 | 572 | 0.0 | 879 |
| MS.gene06161.t1 | AT1G70980 | 72.152 | 553 | 147 | 4 | 13 | 561 | 22 | 571 | 0.0 | 842 |
| MS.gene06161.t1 | AT4G17300 | 46.995 | 549 | 219 | 9 | 18 | 561 | 86 | 567 | 7.05e-167 | 486 |
| MS.gene06161.t1 | AT4G17300 | 46.995 | 549 | 219 | 9 | 18 | 561 | 106 | 587 | 8.68e-167 | 486 |
| MS.gene06161.t1 | AT3G07420 | 47.628 | 506 | 251 | 7 | 61 | 560 | 140 | 637 | 1.12e-165 | 485 |
| MS.gene06161.t1 | AT3G07420 | 44.935 | 385 | 198 | 7 | 61 | 439 | 140 | 516 | 5.41e-109 | 337 |
| MS.gene06161.t1 | AT4G31180 | 31.317 | 281 | 173 | 8 | 285 | 558 | 288 | 555 | 2.37e-28 | 119 |
| MS.gene06161.t1 | AT4G31180 | 31.317 | 281 | 173 | 8 | 285 | 558 | 288 | 555 | 2.37e-28 | 119 |
| MS.gene06161.t1 | AT1G68420 | 63.636 | 77 | 28 | 0 | 315 | 391 | 1 | 77 | 5.22e-28 | 107 |
| MS.gene06161.t1 | AT4G26870 | 29.242 | 277 | 176 | 9 | 285 | 554 | 262 | 525 | 3.38e-26 | 112 |
| MS.gene06161.t1 | AT5G38750 | 35.570 | 149 | 51 | 5 | 26 | 169 | 19 | 127 | 2.27e-15 | 73.6 |
Find 140 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGAGGATATGGAATTTA+TGG | 0.136941 | 4.2:-3208613 | MS.gene06161:CDS |
| CCAGGCATTTGGCTGAATTT+TGG | 0.190908 | 4.2:-3208988 | MS.gene06161:CDS |
| TAGAATGCTTTGATTTCTTT+TGG | 0.211540 | 4.2:+3208172 | None:intergenic |
| TTTCAGGTTGGAGAGTTAAT+TGG | 0.238466 | 4.2:-3207823 | MS.gene06161:intron |
| AATTTGAGAAAGAAGTAAAA+TGG | 0.264571 | 4.2:-3208470 | MS.gene06161:CDS |
| CCTCGGTTACGGTGGATAAT+TGG | 0.276758 | 4.2:+3210382 | None:intergenic |
| AGCTGCTAAGCTTGTTGTTC+AGG | 0.277489 | 4.2:-3209305 | MS.gene06161:CDS |
| TGACAACTGCCTTGAGGATA+TGG | 0.287783 | 4.2:-3208622 | MS.gene06161:CDS |
| GAAGCTTACCGTGTTGGTTC+TGG | 0.296078 | 4.2:+3209951 | None:intergenic |
| TTCAGGTTGGAGAGTTAATT+GGG | 0.300812 | 4.2:-3207822 | MS.gene06161:intron |
| CATCTCAAACTTCCTCCTTC+TGG | 0.307642 | 4.2:-3210102 | MS.gene06161:CDS |
| TTGCATTGATCGTTTGAAAA+TGG | 0.308329 | 4.2:-3208571 | MS.gene06161:CDS |
| TTCTCACACTTCCAGGCATT+TGG | 0.323004 | 4.2:-3208999 | MS.gene06161:CDS |
| GACGCTTCGCTTGCTGATCT+TGG | 0.338136 | 4.2:-3210165 | MS.gene06161:CDS |
| AAGTCTGCAAACGCAATTTC+AGG | 0.340094 | 4.2:+3208956 | None:intergenic |
| GATCGAGCTTCGCGCTGAAC+AGG | 0.346443 | 4.2:-3210067 | MS.gene06161:CDS |
| CCATAGCAGCCACTGTCTTT+AGG | 0.350322 | 4.2:+3208131 | None:intergenic |
| ATGTTACAGACTAGAGGATA+TGG | 0.353962 | 4.2:-3207627 | MS.gene06161:intron |
| CAGAGAATTCTCACACTTCC+AGG | 0.362661 | 4.2:-3209006 | MS.gene06161:CDS |
| TGAAATTGCGTTTGCAGACT+TGG | 0.364314 | 4.2:-3208954 | MS.gene06161:CDS |
| TCTGATACTTCACCTCTGTT+AGG | 0.364762 | 4.2:+3208218 | None:intergenic |
| CGCCGTGAAGACGGCGGATC+AGG | 0.364782 | 4.2:-3210312 | MS.gene06161:CDS |
| ATGGCCGACAAGTTTGATAA+AGG | 0.367425 | 4.2:-3208594 | MS.gene06161:CDS |
| TACAGAAGCTGTGGAAATAC+TGG | 0.367791 | 4.2:-3208517 | MS.gene06161:CDS |
| ATTTGAGAAAGAAGTAAAAT+GGG | 0.373720 | 4.2:-3208469 | MS.gene06161:CDS |
| AAAGGCGAAAGCGTCCTTAT+CGG | 0.375770 | 4.2:+3210236 | None:intergenic |
| GACGATAACTTGAAGGTTAC+CGG | 0.386145 | 4.2:+3210188 | None:intergenic |
| TACCATTCATATGGCTCAAC+AGG | 0.392016 | 4.2:+3207599 | None:intergenic |
| CTTAGTCGCGTGTATACATT+TGG | 0.394717 | 4.2:-3209043 | MS.gene06161:CDS |
| GGATATTTAGCAGGATCAAC+AGG | 0.402646 | 4.2:+3210030 | None:intergenic |
| TCCGTCCTTTCGAGGAATAC+CGG | 0.412212 | 4.2:+3209153 | None:intergenic |
| TTCAAAGCCAAGACCGAATC+CGG | 0.420519 | 4.2:+3207541 | None:intergenic |
| CAAGGATTCAAGAGTGAGTC+TGG | 0.425712 | 4.2:+3209996 | None:intergenic |
| TCCGTCGTTCAATTCCAAAA+AGG | 0.425770 | 4.2:+3210218 | None:intergenic |
| GCTGTCGGAGAATTCAGCTT+TGG | 0.429447 | 4.2:+3210356 | None:intergenic |
| TATCTGCTGTTGCTCGGATT+CGG | 0.429555 | 4.2:-3209519 | MS.gene06161:CDS |
| CATCATAACGCTCCTCCCTT+TGG | 0.431653 | 4.2:+3207794 | None:intergenic |
| AAACATGCCGGATTCGGTCT+TGG | 0.433671 | 4.2:-3207548 | MS.gene06161:CDS |
| TCCACCTTTCCGTCCTTTCG+AGG | 0.434861 | 4.2:+3209145 | None:intergenic |
| CTGTCGGAGAATTCAGCTTT+GGG | 0.435015 | 4.2:+3210357 | None:intergenic |
| ACAGTGAAACATGCCGGATT+CGG | 0.441656 | 4.2:-3207554 | MS.gene06161:CDS |
| CAATCACTAGTGGTGACAAT+TGG | 0.443292 | 4.2:+3209433 | None:intergenic |
| AGCTTTGGGAACCTCGGTTA+CGG | 0.446521 | 4.2:+3210371 | None:intergenic |
| CCAAAATTCAGCCAAATGCC+TGG | 0.449352 | 4.2:+3208988 | None:intergenic |
| CCTAAAGACAGTGGCTGCTA+TGG | 0.464078 | 4.2:-3208131 | MS.gene06161:CDS |
| GCAACCTTTATCAAACTTGT+CGG | 0.464855 | 4.2:+3208590 | None:intergenic |
| TCACTGTTCCATACCGCCTC+AGG | 0.466762 | 4.2:+3207570 | None:intergenic |
| AACCTGATCCGCCGTCTTCA+CGG | 0.469954 | 4.2:+3210310 | None:intergenic |
| GATTCGGTCTTGGCTTTGAA+AGG | 0.469967 | 4.2:-3207538 | MS.gene06161:CDS |
| CCGTCCTTTCGAGGAATACC+GGG | 0.472290 | 4.2:+3209154 | None:intergenic |
| GCCGTCTTCACGGCGGATGA+TGG | 0.473112 | 4.2:+3210320 | None:intergenic |
| CAGGCAAGAAAGCAAGAATC+GGG | 0.476509 | 4.2:-3210284 | MS.gene06161:CDS |
| TGTAGATCTTTCCACCAGCT+TGG | 0.481572 | 4.2:+3209183 | None:intergenic |
| ATTCCCTTCCCACGATATCC+TGG | 0.485303 | 4.2:-3207473 | MS.gene06161:CDS |
| AGGTCAATGTACCATTCATA+TGG | 0.485564 | 4.2:+3207590 | None:intergenic |
| AACCGGAAGAAAAGCCGATA+AGG | 0.487481 | 4.2:-3210250 | MS.gene06161:CDS |
| TGTATATGTAAGTCGAATGA+AGG | 0.488290 | 4.2:+3208536 | None:intergenic |
| GTTCAGTGAAGCAGAGAGGT+TGG | 0.488710 | 4.2:-3209374 | MS.gene06161:CDS |
| TTAGGCAAAGGATATTTAGC+AGG | 0.489337 | 4.2:+3210021 | None:intergenic |
| TCAACATCAGCTTCAGTTGG+AGG | 0.491857 | 4.2:+3209328 | None:intergenic |
| AAGCTTGTTGTTCAGGAGAA+GGG | 0.495167 | 4.2:-3209298 | MS.gene06161:CDS |
| GCTGAACAGGTTCTTCATGT+TGG | 0.497814 | 4.2:-3210054 | MS.gene06161:CDS |
| GGAACTTGTGTTGTTGTTGA+GGG | 0.498325 | 4.2:-3210126 | MS.gene06161:CDS |
| GGCGGATGATGGATTTGATC+AGG | 0.500013 | 4.2:+3210331 | None:intergenic |
| TGCAGATATCTGCTGTTGCT+CGG | 0.500801 | 4.2:-3209525 | MS.gene06161:intron |
| TACATTGACCTGAGGCGGTA+TGG | 0.502024 | 4.2:-3207578 | MS.gene06161:CDS |
| AATTCTCTGCACGAAATGTC+GGG | 0.502631 | 4.2:+3209020 | None:intergenic |
| AATCATAAATCTGCTCTGCC+AGG | 0.503281 | 4.2:+3207455 | None:intergenic |
| GGATAATTATAGACTATGAC+AGG | 0.507099 | 4.2:+3208193 | None:intergenic |
| ATCTGCAAAAGCAGATAAGA+AGG | 0.510339 | 4.2:-3209254 | MS.gene06161:CDS |
| CTTGGACAACTTGTTCAGAC+TGG | 0.510383 | 4.2:-3210147 | MS.gene06161:CDS |
| GACGGCGGATCAGGTTTAGC+AGG | 0.513325 | 4.2:-3210303 | MS.gene06161:CDS |
| GCAGGCAAGAAAGCAAGAAT+CGG | 0.515281 | 4.2:-3210285 | MS.gene06161:CDS |
| ATCTTCTGTTTCGCTCCAGA+AGG | 0.521124 | 4.2:+3210087 | None:intergenic |
| GCTTCAACATCAGCTTCAGT+TGG | 0.525178 | 4.2:+3209325 | None:intergenic |
| AAGCGTCGACGATAACTTGA+AGG | 0.525722 | 4.2:+3210181 | None:intergenic |
| AATTGCGTTTGCAGACTTGG+AGG | 0.525936 | 4.2:-3208951 | MS.gene06161:intron |
| TCCATCATCCGCCGTGAAGA+CGG | 0.526839 | 4.2:-3210321 | MS.gene06161:CDS |
| TAAGCTTGTTGTTCAGGAGA+AGG | 0.533592 | 4.2:-3209299 | MS.gene06161:CDS |
| TTGAACGACGGAAGCTGCGC+CGG | 0.541271 | 4.2:-3210207 | MS.gene06161:CDS |
| GAATTCTCTGCACGAAATGT+CGG | 0.541676 | 4.2:+3209019 | None:intergenic |
| CCGTGTTGGTTCTGGAACGA+AGG | 0.558261 | 4.2:+3209959 | None:intergenic |
| AGCTTGTTGTTCAGGAGAAG+GGG | 0.558894 | 4.2:-3209297 | MS.gene06161:CDS |
| TCTGCTCTGCCAGGATATCG+TGG | 0.559764 | 4.2:+3207464 | None:intergenic |
| TGGATAATTGGCCGGATGAG+AGG | 0.561575 | 4.2:+3210394 | None:intergenic |
| ACAATGTCAGACCTCTCATC+CGG | 0.561641 | 4.2:-3210405 | MS.gene06161:CDS |
| AAAAGAAAATGTATCCAAGC+TGG | 0.561643 | 4.2:-3209197 | MS.gene06161:CDS |
| TTCTGTTTCGCTCCAGAAGG+AGG | 0.561830 | 4.2:+3210090 | None:intergenic |
| TGAAGCAGAGAGGTTGGAGA+AGG | 0.562538 | 4.2:-3209368 | MS.gene06161:CDS |
| GAATTCAGCTTTGGGAACCT+CGG | 0.563789 | 4.2:+3210365 | None:intergenic |
| CCCGGTATTCCTCGAAAGGA+CGG | 0.564925 | 4.2:-3209154 | MS.gene06161:CDS |
| TCAGGTTGGAGAGTTAATTG+GGG | 0.567841 | 4.2:-3207821 | MS.gene06161:intron |
| TGGAACTTGTGTTGTTGTTG+AGG | 0.575683 | 4.2:-3210127 | MS.gene06161:CDS |
| ATTTAGCTTCTGAGCATGAA+AGG | 0.578456 | 4.2:-3208440 | MS.gene06161:intron |
| ACTAGTGATTGTGAGGGTGC+TGG | 0.579234 | 4.2:-3209421 | MS.gene06161:CDS |
| GTATATGTAAGTCGAATGAA+GGG | 0.579832 | 4.2:+3208537 | None:intergenic |
| ACATCAGCTTCAGTTGGAGG+CGG | 0.581956 | 4.2:+3209331 | None:intergenic |
| GGATTTGATCAGGACGCTGT+CGG | 0.584016 | 4.2:+3210341 | None:intergenic |
| CTGCCAGGATATCGTGGGAA+GGG | 0.584465 | 4.2:+3207470 | None:intergenic |
| AGAAAATGTATCCAAGCTGG+TGG | 0.588613 | 4.2:-3209194 | MS.gene06161:CDS |
| CTGGAAGAATCTGTGACGAA+TGG | 0.592469 | 4.2:-3208498 | MS.gene06161:CDS |
| TCCTCGAAAGGACGGAAAGG+TGG | 0.597542 | 4.2:-3209146 | MS.gene06161:CDS |
| GGTTACGGTGGATAATTGGC+CGG | 0.603196 | 4.2:+3210386 | None:intergenic |
| TATGGATGTTCTTGTGCCAA+AGG | 0.605646 | 4.2:-3208113 | MS.gene06161:intron |
| GAAGGAGATTAGTGCTGCTG+TGG | 0.610064 | 4.2:-3209236 | MS.gene06161:CDS |
| TCAGCCCGGTATTCCTCGAA+AGG | 0.611373 | 4.2:-3209158 | MS.gene06161:CDS |
| TATGGAACAGTGAAACATGC+CGG | 0.617944 | 4.2:-3207560 | MS.gene06161:CDS |
| GAAAGATCTACACTTCAGCC+CGG | 0.620865 | 4.2:-3209172 | MS.gene06161:CDS |
| CCATAAATTCCATATCCTCA+AGG | 0.622708 | 4.2:+3208613 | None:intergenic |
| TTTGAGAAAGAAGTAAAATG+GGG | 0.624348 | 4.2:-3208468 | MS.gene06161:CDS |
| CTGCTCTGCCAGGATATCGT+GGG | 0.624533 | 4.2:+3207465 | None:intergenic |
| CTTTGTTCAGTGAAGCAGAG+AGG | 0.632800 | 4.2:-3209378 | MS.gene06161:CDS |
| GTTATAATGTTACAGACTAG+AGG | 0.632976 | 4.2:-3207633 | MS.gene06161:intron |
| GGCAAGAAAGCAAGAATCGG+GGG | 0.633348 | 4.2:-3210282 | MS.gene06161:CDS |
| CAGGTTGGAGAGTTAATTGG+GGG | 0.635147 | 4.2:-3207820 | MS.gene06161:CDS |
| CCTTCGTTCCAGAACCAACA+CGG | 0.635811 | 4.2:-3209959 | MS.gene06161:intron |
| GCTTGTTGTTCAGGAGAAGG+GGG | 0.639836 | 4.2:-3209296 | MS.gene06161:CDS |
| TCTGCCAGGATATCGTGGGA+AGG | 0.640927 | 4.2:+3207469 | None:intergenic |
| GTTACTTGACAACTGCCTTG+AGG | 0.641332 | 4.2:-3208628 | MS.gene06161:CDS |
| CTGTCTTTAGGTCATCATTG+AGG | 0.642743 | 4.2:+3208143 | None:intergenic |
| CCAATTATCCACCGTAACCG+AGG | 0.644381 | 4.2:-3210382 | MS.gene06161:CDS |
| AATGGTACATTGACCTGAGG+CGG | 0.645218 | 4.2:-3207583 | MS.gene06161:CDS |
| ACTTACATATACAGAAGCTG+TGG | 0.652239 | 4.2:-3208526 | MS.gene06161:CDS |
| TATTCCTCGAAAGGACGGAA+AGG | 0.658806 | 4.2:-3209149 | MS.gene06161:CDS |
| ATCATCCGCCGTGAAGACGG+CGG | 0.659218 | 4.2:-3210318 | MS.gene06161:CDS |
| TGCCTGTTGAGCCATATGAA+TGG | 0.659840 | 4.2:-3207601 | MS.gene06161:CDS |
| TTTGGGAACCTCGGTTACGG+TGG | 0.663451 | 4.2:+3210374 | None:intergenic |
| GTTATGATGTCATTCAACAA+AGG | 0.665614 | 4.2:-3207780 | MS.gene06161:intron |
| AGCACCCTCACAATCACTAG+TGG | 0.672495 | 4.2:+3209423 | None:intergenic |
| AAGGTGAACGAAATCACGCA+AGG | 0.674910 | 4.2:+3209978 | None:intergenic |
| TGTCACCACTAGTGATTGTG+AGG | 0.675390 | 4.2:-3209428 | MS.gene06161:CDS |
| ATGAATGGTACATTGACCTG+AGG | 0.689555 | 4.2:-3207586 | MS.gene06161:CDS |
| AGGCAAGAAAGCAAGAATCG+GGG | 0.689745 | 4.2:-3210283 | MS.gene06161:CDS |
| CAATGATGACCTAAAGACAG+TGG | 0.699761 | 4.2:-3208140 | MS.gene06161:CDS |
| ATATGTAAGTCGAATGAAGG+GGG | 0.701471 | 4.2:+3208539 | None:intergenic |
| TATATGTAAGTCGAATGAAG+GGG | 0.702544 | 4.2:+3208538 | None:intergenic |
| GGATGATATGAAGTGCGCCG+AGG | 0.712177 | 4.2:-3208676 | MS.gene06161:CDS |
| CTGATCCGCCGTCTTCACGG+CGG | 0.741003 | 4.2:+3210313 | None:intergenic |
| GGTATGCAGATACCTAACAG+AGG | 0.750059 | 4.2:-3208230 | MS.gene06161:intron |
| GTCACCACTAGTGATTGTGA+GGG | 0.751157 | 4.2:-3209427 | MS.gene06161:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATATAAAAAGTTAAATT+CGG | - | chr4.2:3208171-3208190 | MS.gene06161:CDS | 10.0% |
| !! | TAATTACAATAATTCTTATT+CGG | - | chr4.2:3208207-3208226 | MS.gene06161:CDS | 10.0% |
| !!! | TTATAATTTCGTTAATTTTA+GGG | - | chr4.2:3208082-3208101 | MS.gene06161:intron | 10.0% |
| !!! | TTTATAATTTCGTTAATTTT+AGG | - | chr4.2:3208081-3208100 | MS.gene06161:intron | 10.0% |
| !! | TTATAAAATAATCCCTAAAT+TGG | + | chr4.2:3208068-3208087 | None:intergenic | 15.0% |
| !!! | AATTCAAATACTGTTTTTTA+GGG | - | chr4.2:3209048-3209067 | MS.gene06161:CDS | 15.0% |
| !!! | TTTTTATGCATGTTATTATT+GGG | - | chr4.2:3208309-3208328 | MS.gene06161:intron | 15.0% |
| !!! | TTTTTTATGCATGTTATTAT+TGG | - | chr4.2:3208308-3208327 | MS.gene06161:intron | 15.0% |
| !! | AAACAACACAATTTAATAAG+AGG | + | chr4.2:3209593-3209612 | None:intergenic | 20.0% |
| !! | AACTACATATCAAACTATTA+AGG | - | chr4.2:3209886-3209905 | MS.gene06161:intron | 20.0% |
| !! | AATAATTCTTATTCGGAATT+GGG | - | chr4.2:3208214-3208233 | MS.gene06161:CDS | 20.0% |
| !! | AATTTGAGAAAGAAGTAAAA+TGG | - | chr4.2:3209389-3209408 | MS.gene06161:CDS | 20.0% |
| !! | AGAATTATTGTAATTACCAA+AGG | + | chr4.2:3208203-3208222 | None:intergenic | 20.0% |
| !! | ATTTAATAAGAGGAATGATA+AGG | + | chr4.2:3209583-3209602 | None:intergenic | 20.0% |
| !! | ATTTGAGAAAGAAGTAAAAT+GGG | - | chr4.2:3209390-3209409 | MS.gene06161:CDS | 20.0% |
| !! | CATGTTAAAACAAAATATAC+AGG | + | chr4.2:3209779-3209798 | None:intergenic | 20.0% |
| !! | TAATATTTGCATTATTGTGT+AGG | - | chr4.2:3209162-3209181 | MS.gene06161:CDS | 20.0% |
| !! | TATTTATGAATTAGTGTAAG+CGG | + | chr4.2:3210118-3210137 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTAACATGTCTA+TGG | - | chr4.2:3209783-3209802 | MS.gene06161:intron | 20.0% |
| !!! | CAATTCAAATACTGTTTTTT+AGG | - | chr4.2:3209047-3209066 | MS.gene06161:CDS | 20.0% |
| !!! | GTGTTTTTTACGATTAATAT+TGG | - | chr4.2:3209485-3209504 | MS.gene06161:CDS | 20.0% |
| !!! | TACAATTTTAAGGATTGAAT+AGG | - | chr4.2:3208123-3208142 | MS.gene06161:CDS | 20.0% |
| !!! | TTTGTTATAAACCACATTAT+CGG | - | chr4.2:3209016-3209035 | MS.gene06161:CDS | 20.0% |
| ! | ACAGAAAAATCCTTTACAAA+AGG | + | chr4.2:3210166-3210185 | None:intergenic | 25.0% |
| ! | ACATTATAACAGTAGAAACA+AGG | + | chr4.2:3210216-3210235 | None:intergenic | 25.0% |
| ! | CAATAATTCTTATTCGGAAT+TGG | - | chr4.2:3208213-3208232 | MS.gene06161:CDS | 25.0% |
| ! | TCATCATTACTATACACAAT+TGG | + | chr4.2:3207968-3207987 | None:intergenic | 25.0% |
| ! | TTTGAGAAAGAAGTAAAATG+GGG | - | chr4.2:3209391-3209410 | MS.gene06161:CDS | 25.0% |
| !! | TTGGAACACATTAGTTTATT+TGG | + | chr4.2:3208040-3208059 | None:intergenic | 25.0% |
| !!! | AGTTTTTGAAATTGTCTTGA+AGG | + | chr4.2:3208005-3208024 | None:intergenic | 25.0% |
| !!! | ATACATTTTTCAACAAGCAT+GGG | - | chr4.2:3208385-3208404 | MS.gene06161:intron | 25.0% |
| !!! | ATTTCCTGTTGTTGTTTTAT+TGG | + | chr4.2:3208156-3208175 | None:intergenic | 25.0% |
| !!! | GTTTTTGAAATTGTCTTGAA+GGG | + | chr4.2:3208004-3208023 | None:intergenic | 25.0% |
| !!! | TAGAATGCTTTGATTTCTTT+TGG | + | chr4.2:3209690-3209709 | None:intergenic | 25.0% |
| AAAAGAAAATGTATCCAAGC+TGG | - | chr4.2:3208662-3208681 | MS.gene06161:CDS | 30.0% | |
| AATCCCTAAATTGGAAATCT+TGG | + | chr4.2:3208059-3208078 | None:intergenic | 30.0% | |
| ATATACAGGATACATACCTT+TGG | + | chr4.2:3209765-3209784 | None:intergenic | 30.0% | |
| CAAAAATTTCACATATGCCT+CGG | + | chr4.2:3209203-3209222 | None:intergenic | 30.0% | |
| GGATAATTATAGACTATGAC+AGG | + | chr4.2:3209669-3209688 | None:intergenic | 30.0% | |
| GTATATGTAAGTCGAATGAA+GGG | + | chr4.2:3209325-3209344 | None:intergenic | 30.0% | |
| GTTATAATGTTACAGACTAG+AGG | - | chr4.2:3210226-3210245 | MS.gene06161:CDS | 30.0% | |
| GTTATGATGTCATTCAACAA+AGG | - | chr4.2:3210079-3210098 | MS.gene06161:CDS | 30.0% | |
| GTTCCAAGATTTCCAATTTA+GGG | - | chr4.2:3208053-3208072 | MS.gene06161:intron | 30.0% | |
| TAATAAGAGGAATGATAAGG+TGG | + | chr4.2:3209580-3209599 | None:intergenic | 30.0% | |
| TATATGTAAGTCGAATGAAG+GGG | + | chr4.2:3209324-3209343 | None:intergenic | 30.0% | |
| TGTATATGTAAGTCGAATGA+AGG | + | chr4.2:3209326-3209345 | None:intergenic | 30.0% | |
| TGTTCCAAGATTTCCAATTT+AGG | - | chr4.2:3208052-3208071 | MS.gene06161:intron | 30.0% | |
| TTAAATTCGGAATGAACCTT+TGG | - | chr4.2:3208184-3208203 | MS.gene06161:CDS | 30.0% | |
| TTACTTATATGACACTGAGT+GGG | - | chr4.2:3209943-3209962 | MS.gene06161:intron | 30.0% | |
| TTTACTTATATGACACTGAG+TGG | - | chr4.2:3209942-3209961 | MS.gene06161:intron | 30.0% | |
| ! | ATGTGAAATTTTTGTGTCAG+TGG | - | chr4.2:3209209-3209228 | MS.gene06161:CDS | 30.0% |
| ! | GTAAAGGATTTTTCTGTTCA+TGG | - | chr4.2:3210169-3210188 | MS.gene06161:CDS | 30.0% |
| ! | TACTGTGTTTCCTTTTGTAA+AGG | - | chr4.2:3210153-3210172 | MS.gene06161:CDS | 30.0% |
| ! | TCACATCTCTAATATTTTCC+AGG | + | chr4.2:3210367-3210386 | None:intergenic | 30.0% |
| ! | TTGCATTGATCGTTTGAAAA+TGG | - | chr4.2:3209288-3209307 | MS.gene06161:CDS | 30.0% |
| !! | CATACATTTTTCAACAAGCA+TGG | - | chr4.2:3208384-3208403 | MS.gene06161:intron | 30.0% |
| AAAAAAGAAGCTTACCGTGT+TGG | + | chr4.2:3207917-3207936 | None:intergenic | 35.0% | |
| AAACAGTCAAAAACGCTTGA+CGG | + | chr4.2:3208761-3208780 | None:intergenic | 35.0% | |
| AATTGTAGAGACCAGACAAT+TGG | + | chr4.2:3208110-3208129 | None:intergenic | 35.0% | |
| ACTTACATATACAGAAGCTG+TGG | - | chr4.2:3209333-3209352 | MS.gene06161:CDS | 35.0% | |
| AGGTCAATGTACCATTCATA+TGG | + | chr4.2:3210272-3210291 | None:intergenic | 35.0% | |
| ATATGTAAGTCGAATGAAGG+GGG | + | chr4.2:3209323-3209342 | None:intergenic | 35.0% | |
| ATCTGCAAAAGCAGATAAGA+AGG | - | chr4.2:3208605-3208624 | MS.gene06161:CDS | 35.0% | |
| ATGTTACAGACTAGAGGATA+TGG | - | chr4.2:3210232-3210251 | MS.gene06161:CDS | 35.0% | |
| ATTGTAGAGACCAGACAATT+GGG | + | chr4.2:3208109-3208128 | None:intergenic | 35.0% | |
| CCATAAATTCCATATCCTCA+AGG | + | chr4.2:3209249-3209268 | None:intergenic | 35.0% | |
| CCTTGAGGATATGGAATTTA+TGG | - | chr4.2:3209246-3209265 | MS.gene06161:CDS | 35.0% | |
| CTCACCAATAAAACAACAAC+AGG | - | chr4.2:3208149-3208168 | MS.gene06161:CDS | 35.0% | |
| CTTGGGAAAAGAACTATAGA+AGG | - | chr4.2:3209808-3209827 | MS.gene06161:intron | 35.0% | |
| GAACGTGTAACTGTAATTTC+AGG | - | chr4.2:3210020-3210039 | MS.gene06161:CDS | 35.0% | |
| GCAACCTTTATCAAACTTGT+CGG | + | chr4.2:3209272-3209291 | None:intergenic | 35.0% | |
| TACTTATATGACACTGAGTG+GGG | - | chr4.2:3209944-3209963 | MS.gene06161:intron | 35.0% | |
| TTAACATGTCTATGGTGCTT+GGG | - | chr4.2:3209791-3209810 | MS.gene06161:intron | 35.0% | |
| TTAGGCAAAGGATATTTAGC+AGG | + | chr4.2:3207841-3207860 | None:intergenic | 35.0% | |
| TTTAACATGTCTATGGTGCT+TGG | - | chr4.2:3209790-3209809 | MS.gene06161:intron | 35.0% | |
| ! | AGGATGATTCTTTTTGCAAC+CGG | - | chr4.2:3210341-3210360 | MS.gene06161:CDS | 35.0% |
| ! | ATCTCTAATATTTTCCAGGC+CGG | + | chr4.2:3210363-3210382 | None:intergenic | 35.0% |
| ! | ATTTAGCTTCTGAGCATGAA+AGG | - | chr4.2:3209419-3209438 | MS.gene06161:CDS | 35.0% |
| ! | GTCTGGTCTCTACAATTTTA+AGG | - | chr4.2:3208113-3208132 | MS.gene06161:intron | 35.0% |
| ! | GTGTAACTGTAATTTCAGGT+TGG | - | chr4.2:3210024-3210043 | MS.gene06161:CDS | 35.0% |
| !! | ATTGTGTTGTTTGATGCCTT+TGG | - | chr4.2:3209601-3209620 | MS.gene06161:intron | 35.0% |
| !! | TTCAGGTTGGAGAGTTAATT+GGG | - | chr4.2:3210037-3210056 | MS.gene06161:CDS | 35.0% |
| !! | TTGTGTTGTTTGATGCCTTT+GGG | - | chr4.2:3209602-3209621 | MS.gene06161:intron | 35.0% |
| !! | TTTCAGGTTGGAGAGTTAAT+TGG | - | chr4.2:3210036-3210055 | MS.gene06161:CDS | 35.0% |
| AACAGTCAAAAACGCTTGAC+GGG | + | chr4.2:3208760-3208779 | None:intergenic | 40.0% | |
| AAGTCTGCAAACGCAATTTC+AGG | + | chr4.2:3208906-3208925 | None:intergenic | 40.0% | |
| AATTCTCTGCACGAAATGTC+GGG | + | chr4.2:3208842-3208861 | None:intergenic | 40.0% | |
| ACACTGCTTACTATGATGGT+AGG | + | chr4.2:3209834-3209853 | None:intergenic | 40.0% | |
| AGAAAATGTATCCAAGCTGG+TGG | - | chr4.2:3208665-3208684 | MS.gene06161:CDS | 40.0% | |
| ATCTGCATACCATAACCCAA+AGG | + | chr4.2:3209620-3209639 | None:intergenic | 40.0% | |
| ATGAATGGTACATTGACCTG+AGG | - | chr4.2:3210273-3210292 | MS.gene06161:CDS | 40.0% | |
| ATGGCCGACAAGTTTGATAA+AGG | - | chr4.2:3209265-3209284 | MS.gene06161:CDS | 40.0% | |
| CAATCACTAGTGGTGACAAT+TGG | + | chr4.2:3208429-3208448 | None:intergenic | 40.0% | |
| CAATGATGACCTAAAGACAG+TGG | - | chr4.2:3209719-3209738 | MS.gene06161:intron | 40.0% | |
| CTGTCTTTAGGTCATCATTG+AGG | + | chr4.2:3209719-3209738 | None:intergenic | 40.0% | |
| CTTAGTCGCGTGTATACATT+TGG | - | chr4.2:3208816-3208835 | MS.gene06161:intron | 40.0% | |
| GAATTCTCTGCACGAAATGT+CGG | + | chr4.2:3208843-3208862 | None:intergenic | 40.0% | |
| GACGATAACTTGAAGGTTAC+CGG | + | chr4.2:3207674-3207693 | None:intergenic | 40.0% | |
| GGATATTTAGCAGGATCAAC+AGG | + | chr4.2:3207832-3207851 | None:intergenic | 40.0% | |
| GTCTACACTGCTTACTATGA+TGG | + | chr4.2:3209838-3209857 | None:intergenic | 40.0% | |
| TACAGAAGCTGTGGAAATAC+TGG | - | chr4.2:3209342-3209361 | MS.gene06161:CDS | 40.0% | |
| TACCATTCATATGGCTCAAC+AGG | + | chr4.2:3210263-3210282 | None:intergenic | 40.0% | |
| TATGGAACAGTGAAACATGC+CGG | - | chr4.2:3210299-3210318 | MS.gene06161:CDS | 40.0% | |
| TATGGATGTTCTTGTGCCAA+AGG | - | chr4.2:3209746-3209765 | MS.gene06161:intron | 40.0% | |
| TCCGTCGTTCAATTCCAAAA+AGG | + | chr4.2:3207644-3207663 | None:intergenic | 40.0% | |
| TCTGATACTTCACCTCTGTT+AGG | + | chr4.2:3209644-3209663 | None:intergenic | 40.0% | |
| TGAAATTGCGTTTGCAGACT+TGG | - | chr4.2:3208905-3208924 | MS.gene06161:intron | 40.0% | |
| ! | GCATTTGGCTGAATTTTGGA+TGG | - | chr4.2:3208875-3208894 | MS.gene06161:intron | 40.0% |
| ! | GGAACTTGTGTTGTTGTTGA+GGG | - | chr4.2:3207733-3207752 | MS.gene06161:intron | 40.0% |
| ! | TGGAACTTGTGTTGTTGTTG+AGG | - | chr4.2:3207732-3207751 | MS.gene06161:intron | 40.0% |
| ! | TGTTTGATGCCTTTGGGTTA+TGG | - | chr4.2:3209608-3209627 | MS.gene06161:intron | 40.0% |
| !! | AAGCTTGTTGTTCAGGAGAA+GGG | - | chr4.2:3208561-3208580 | MS.gene06161:CDS | 40.0% |
| !! | ATTTTAGGGACCCAATTGTC+TGG | - | chr4.2:3208096-3208115 | MS.gene06161:intron | 40.0% |
| !! | CAAGCGTTTTTGACTGTTTC+TGG | - | chr4.2:3208762-3208781 | MS.gene06161:intron | 40.0% |
| !! | CTGTTACTTTCGTGAATGTG+TGG | - | chr4.2:3209508-3209527 | MS.gene06161:CDS | 40.0% |
| !! | GCTTTTGTGGTTGGTGTAAT+AGG | - | chr4.2:3209998-3210017 | MS.gene06161:CDS | 40.0% |
| !! | TAAGCTTGTTGTTCAGGAGA+AGG | - | chr4.2:3208560-3208579 | MS.gene06161:CDS | 40.0% |
| !! | TCAGGTTGGAGAGTTAATTG+GGG | - | chr4.2:3210038-3210057 | MS.gene06161:CDS | 40.0% |
| !!! | GCCTTTTTGGAATTGAACGA+CGG | - | chr4.2:3207640-3207659 | MS.gene06161:intron | 40.0% |
| !!! | GTTATACCCAGTTGCTTTTG+TGG | - | chr4.2:3209985-3210004 | MS.gene06161:CDS | 40.0% |
| !!! | TCAAGAGTGAGTCTGGTTTT+AGG | + | chr4.2:3207859-3207878 | None:intergenic | 40.0% |
| AACCGGAAGAAAAGCCGATA+AGG | - | chr4.2:3207609-3207628 | MS.gene06161:CDS | 45.0% | |
| AAGCACCAACCATAGGAGTA+GGG | + | chr4.2:3209119-3209138 | None:intergenic | 45.0% | |
| AAGGTGAACGAAATCACGCA+AGG | + | chr4.2:3207884-3207903 | None:intergenic | 45.0% | |
| AATGGTACATTGACCTGAGG+CGG | - | chr4.2:3210276-3210295 | MS.gene06161:CDS | 45.0% | |
| AATTGCGTTTGCAGACTTGG+AGG | - | chr4.2:3208908-3208927 | MS.gene06161:intron | 45.0% | |
| ACACCAACCACAAAAGCAAC+TGG | + | chr4.2:3209995-3210014 | None:intergenic | 45.0% | |
| ACAGTGAAACATGCCGGATT+CGG | - | chr4.2:3210305-3210324 | MS.gene06161:CDS | 45.0% | |
| AGAGGAATGATAAGGTGGCT+TGG | + | chr4.2:3209575-3209594 | None:intergenic | 45.0% | |
| AGGCAAGAAAGCAAGAATCG+GGG | - | chr4.2:3207576-3207595 | MS.gene06161:CDS | 45.0% | |
| AGTTAATTGGGGGAAGCCAA+AGG | - | chr4.2:3210049-3210068 | MS.gene06161:CDS | 45.0% | |
| ATCTTCTGTTTCGCTCCAGA+AGG | + | chr4.2:3207775-3207794 | None:intergenic | 45.0% | |
| CAAGGATTCAAGAGTGAGTC+TGG | + | chr4.2:3207866-3207885 | None:intergenic | 45.0% | |
| CACCAACCACAAAAGCAACT+GGG | + | chr4.2:3209994-3210013 | None:intergenic | 45.0% | |
| CAGAGAATTCTCACACTTCC+AGG | - | chr4.2:3208853-3208872 | MS.gene06161:intron | 45.0% | |
| CAGGCAAGAAAGCAAGAATC+GGG | - | chr4.2:3207575-3207594 | MS.gene06161:CDS | 45.0% | |
| CATCTCAAACTTCCTCCTTC+TGG | - | chr4.2:3207757-3207776 | MS.gene06161:intron | 45.0% | |
| CCAAAATTCAGCCAAATGCC+TGG | + | chr4.2:3208874-3208893 | None:intergenic | 45.0% | |
| CTGGAAGAATCTGTGACGAA+TGG | - | chr4.2:3209361-3209380 | MS.gene06161:CDS | 45.0% | |
| CTGTCGGAGAATTCAGCTTT+GGG | + | chr4.2:3207505-3207524 | None:intergenic | 45.0% | |
| CTTTGTTCAGTGAAGCAGAG+AGG | - | chr4.2:3208481-3208500 | MS.gene06161:CDS | 45.0% | |
| GAAAGATCTACACTTCAGCC+CGG | - | chr4.2:3208687-3208706 | MS.gene06161:intron | 45.0% | |
| GCAGGCAAGAAAGCAAGAAT+CGG | - | chr4.2:3207574-3207593 | MS.gene06161:CDS | 45.0% | |
| GCTGAACAGGTTCTTCATGT+TGG | - | chr4.2:3207805-3207824 | MS.gene06161:CDS | 45.0% | |
| GCTTCAACATCAGCTTCAGT+TGG | + | chr4.2:3208537-3208556 | None:intergenic | 45.0% | |
| GGTATGCAGATACCTAACAG+AGG | - | chr4.2:3209629-3209648 | MS.gene06161:intron | 45.0% | |
| GTCACCACTAGTGATTGTGA+GGG | - | chr4.2:3208432-3208451 | MS.gene06161:intron | 45.0% | |
| GTTAATTGGGGGAAGCCAAA+GGG | - | chr4.2:3210050-3210069 | MS.gene06161:CDS | 45.0% | |
| GTTACTTGACAACTGCCTTG+AGG | - | chr4.2:3209231-3209250 | MS.gene06161:CDS | 45.0% | |
| TATCTGCTGTTGCTCGGATT+CGG | - | chr4.2:3208340-3208359 | MS.gene06161:intron | 45.0% | |
| TATTCCTCGAAAGGACGGAA+AGG | - | chr4.2:3208710-3208729 | MS.gene06161:intron | 45.0% | |
| TCAACATCAGCTTCAGTTGG+AGG | + | chr4.2:3208534-3208553 | None:intergenic | 45.0% | |
| TGACAACTGCCTTGAGGATA+TGG | - | chr4.2:3209237-3209256 | MS.gene06161:CDS | 45.0% | |
| TGCAGATATCTGCTGTTGCT+CGG | - | chr4.2:3208334-3208353 | MS.gene06161:intron | 45.0% | |
| TGCCTGTTGAGCCATATGAA+TGG | - | chr4.2:3210258-3210277 | MS.gene06161:CDS | 45.0% | |
| TGTAGATCTTTCCACCAGCT+TGG | + | chr4.2:3208679-3208698 | None:intergenic | 45.0% | |
| TGTCACCACTAGTGATTGTG+AGG | - | chr4.2:3208431-3208450 | MS.gene06161:intron | 45.0% | |
| TTCAAAGCCAAGACCGAATC+CGG | + | chr4.2:3210321-3210340 | None:intergenic | 45.0% | |
| TTCTCACACTTCCAGGCATT+TGG | - | chr4.2:3208860-3208879 | MS.gene06161:intron | 45.0% | |
| TTGACACTCAGCCGATAATG+TGG | + | chr4.2:3209030-3209049 | None:intergenic | 45.0% | |
| ! | AAAGCACCAACCATAGGAGT+AGG | + | chr4.2:3209120-3209139 | None:intergenic | 45.0% |
| ! | CAGGTTGGAGAGTTAATTGG+GGG | - | chr4.2:3210039-3210058 | MS.gene06161:CDS | 45.0% |
| ! | CCAGGCATTTGGCTGAATTT+TGG | - | chr4.2:3208871-3208890 | MS.gene06161:intron | 45.0% |
| ! | CTTGGACAACTTGTTCAGAC+TGG | - | chr4.2:3207712-3207731 | MS.gene06161:intron | 45.0% |
| ! | TAAGGACGCTTTCGCCTTTT+TGG | - | chr4.2:3207627-3207646 | MS.gene06161:intron | 45.0% |
| !! | AAAGGCGAAAGCGTCCTTAT+CGG | + | chr4.2:3207626-3207645 | None:intergenic | 45.0% |
| !! | AAGCGTCGACGATAACTTGA+AGG | + | chr4.2:3207681-3207700 | None:intergenic | 45.0% |
| !! | ACAGCAAAAGCACCAACCAT+AGG | + | chr4.2:3209126-3209145 | None:intergenic | 45.0% |
| !! | AGCTGCTAAGCTTGTTGTTC+AGG | - | chr4.2:3208554-3208573 | MS.gene06161:CDS | 45.0% |
| !! | AGCTTGTTGTTCAGGAGAAG+GGG | - | chr4.2:3208562-3208581 | MS.gene06161:CDS | 45.0% |
| !! | GAATTCAGCTTTGGGAACCT+CGG | + | chr4.2:3207497-3207516 | None:intergenic | 45.0% |
| !! | GATTCGGTCTTGGCTTTGAA+AGG | - | chr4.2:3210321-3210340 | MS.gene06161:CDS | 45.0% |
| !! | TATGGTTGGTGCTTTTGCTG+TGG | - | chr4.2:3209125-3209144 | MS.gene06161:CDS | 45.0% |
| !!! | GTCCTTATCGGCTTTTCTTC+CGG | + | chr4.2:3207614-3207633 | None:intergenic | 45.0% |
| !!! | GTGAGTCTGGTTTTAGGCAA+AGG | + | chr4.2:3207853-3207872 | None:intergenic | 45.0% |
| !!! | TACCCAGTTGCTTTTGTGGT+TGG | - | chr4.2:3209989-3210008 | MS.gene06161:CDS | 45.0% |
| ACATCAGCTTCAGTTGGAGG+CGG | + | chr4.2:3208531-3208550 | None:intergenic | 50.0% | |
| AGAAAGCAAGAATCGGGGGA+TGG | - | chr4.2:3207581-3207600 | MS.gene06161:CDS | 50.0% | |
| AGCACCAACCATAGGAGTAG+GGG | + | chr4.2:3209118-3209137 | None:intergenic | 50.0% | |
| AGCACCCTCACAATCACTAG+TGG | + | chr4.2:3208439-3208458 | None:intergenic | 50.0% | |
| ATTCCCTTCCCACGATATCC+TGG | - | chr4.2:3210386-3210405 | MS.gene06161:CDS | 50.0% | |
| CAACTTCACCCCTACTCCTA+TGG | - | chr4.2:3209107-3209126 | MS.gene06161:CDS | 50.0% | |
| CATAGGAGTAGGGGTGAAGT+TGG | + | chr4.2:3209109-3209128 | None:intergenic | 50.0% | |
| CATCATAACGCTCCTCCCTT+TGG | + | chr4.2:3210068-3210087 | None:intergenic | 50.0% | |
| CCAATTATCCACCGTAACCG+AGG | - | chr4.2:3207477-3207496 | MS.gene06161:CDS | 50.0% | |
| CCATAGCAGCCACTGTCTTT+AGG | + | chr4.2:3209731-3209750 | None:intergenic | 50.0% | |
| CCTAAAGACAGTGGCTGCTA+TGG | - | chr4.2:3209728-3209747 | MS.gene06161:intron | 50.0% | |
| CCTCGGTTACGGTGGATAAT+TGG | + | chr4.2:3207480-3207499 | None:intergenic | 50.0% | |
| CCTTCGTTCCAGAACCAACA+CGG | - | chr4.2:3207900-3207919 | MS.gene06161:intron | 50.0% | |
| GAAAGCAAGAATCGGGGGAT+GGG | - | chr4.2:3207582-3207601 | MS.gene06161:CDS | 50.0% | |
| GCTGTCGGAGAATTCAGCTT+TGG | + | chr4.2:3207506-3207525 | None:intergenic | 50.0% | |
| GGATTTGATCAGGACGCTGT+CGG | + | chr4.2:3207521-3207540 | None:intergenic | 50.0% | |
| GGCAAGAAAGCAAGAATCGG+GGG | - | chr4.2:3207577-3207596 | MS.gene06161:CDS | 50.0% | |
| GGTTACGGTGGATAATTGGC+CGG | + | chr4.2:3207476-3207495 | None:intergenic | 50.0% | |
| GTTCAGTGAAGCAGAGAGGT+TGG | - | chr4.2:3208485-3208504 | MS.gene06161:CDS | 50.0% | |
| TACATTGACCTGAGGCGGTA+TGG | - | chr4.2:3210281-3210300 | MS.gene06161:CDS | 50.0% | |
| TCCGTCCTTTCGAGGAATAC+CGG | + | chr4.2:3208709-3208728 | None:intergenic | 50.0% | |
| TGAAGCAGAGAGGTTGGAGA+AGG | - | chr4.2:3208491-3208510 | MS.gene06161:CDS | 50.0% | |
| TGGATAATTGGCCGGATGAG+AGG | + | chr4.2:3207468-3207487 | None:intergenic | 50.0% | |
| TTCACCCCTACTCCTATGGT+TGG | - | chr4.2:3209111-3209130 | MS.gene06161:CDS | 50.0% | |
| TTCTGTTTCGCTCCAGAAGG+AGG | + | chr4.2:3207772-3207791 | None:intergenic | 50.0% | |
| ! | AAACATGCCGGATTCGGTCT+TGG | - | chr4.2:3210311-3210330 | MS.gene06161:CDS | 50.0% |
| ! | ACTAGTGATTGTGAGGGTGC+TGG | - | chr4.2:3208438-3208457 | MS.gene06161:intron | 50.0% |
| ! | CTTTGCATCGACACTCAGTC+TGG | + | chr4.2:3208257-3208276 | None:intergenic | 50.0% |
| ! | GAAGGAGATTAGTGCTGCTG+TGG | - | chr4.2:3208623-3208642 | MS.gene06161:CDS | 50.0% |
| ! | GATTCTTTTTGCAACCGGCC+TGG | - | chr4.2:3210346-3210365 | MS.gene06161:CDS | 50.0% |
| ! | GGAATGATAAGGTGGCTTGG+TGG | + | chr4.2:3209572-3209591 | None:intergenic | 50.0% |
| !! | AGCTTTGGGAACCTCGGTTA+CGG | + | chr4.2:3207491-3207510 | None:intergenic | 50.0% |
| !! | AGGTGGCTTGGTGGTTGAAT+AGG | + | chr4.2:3209563-3209582 | None:intergenic | 50.0% |
| !! | CAGACTGAGTGTCGATGCAA+AGG | - | chr4.2:3208255-3208274 | MS.gene06161:intron | 50.0% |
| !! | GAAGCTTACCGTGTTGGTTC+TGG | + | chr4.2:3207911-3207930 | None:intergenic | 50.0% |
| !! | GCTTGTTGTTCAGGAGAAGG+GGG | - | chr4.2:3208563-3208582 | MS.gene06161:CDS | 50.0% |
| !! | GGCGGATGATGGATTTGATC+AGG | + | chr4.2:3207531-3207550 | None:intergenic | 50.0% |
| !! | GGTGGCTTGGTGGTTGAATA+GGG | + | chr4.2:3209562-3209581 | None:intergenic | 50.0% |
| AACCTGATCCGCCGTCTTCA+CGG | + | chr4.2:3207552-3207571 | None:intergenic | 55.0% | |
| AATTGGGGGAAGCCAAAGGG+AGG | - | chr4.2:3210053-3210072 | MS.gene06161:CDS | 55.0% | |
| ATCGGGGGATGGGTGAAAAC+CGG | - | chr4.2:3207592-3207611 | MS.gene06161:CDS | 55.0% | |
| CCCGGTATTCCTCGAAAGGA+CGG | - | chr4.2:3208705-3208724 | MS.gene06161:intron | 55.0% | |
| CCGTCCTTTCGAGGAATACC+GGG | + | chr4.2:3208708-3208727 | None:intergenic | 55.0% | |
| CTGCCAGGATATCGTGGGAA+GGG | + | chr4.2:3210392-3210411 | None:intergenic | 55.0% | |
| CTGCTCTGCCAGGATATCGT+GGG | + | chr4.2:3210397-3210416 | None:intergenic | 55.0% | |
| GGATGATATGAAGTGCGCCG+AGG | - | chr4.2:3209183-3209202 | MS.gene06161:CDS | 55.0% | |
| TCACTGTTCCATACCGCCTC+AGG | + | chr4.2:3210292-3210311 | None:intergenic | 55.0% | |
| TCAGCCCGGTATTCCTCGAA+AGG | - | chr4.2:3208701-3208720 | MS.gene06161:intron | 55.0% | |
| TCCACCTTTCCGTCCTTTCG+AGG | + | chr4.2:3208717-3208736 | None:intergenic | 55.0% | |
| TCCATCATCCGCCGTGAAGA+CGG | - | chr4.2:3207538-3207557 | MS.gene06161:CDS | 55.0% | |
| TCCTCGAAAGGACGGAAAGG+TGG | - | chr4.2:3208713-3208732 | MS.gene06161:intron | 55.0% | |
| TCTGCCAGGATATCGTGGGA+AGG | + | chr4.2:3210393-3210412 | None:intergenic | 55.0% | |
| TCTGCTCTGCCAGGATATCG+TGG | + | chr4.2:3210398-3210417 | None:intergenic | 55.0% | |
| TGAATAGGGCGGAGCAGCAA+AGG | + | chr4.2:3209548-3209567 | None:intergenic | 55.0% | |
| TGTTGTTCAGGAGAAGGGGG+AGG | - | chr4.2:3208566-3208585 | MS.gene06161:CDS | 55.0% | |
| TTTGGGAACCTCGGTTACGG+TGG | + | chr4.2:3207488-3207507 | None:intergenic | 55.0% | |
| ! | GACGCTTCGCTTGCTGATCT+TGG | - | chr4.2:3207694-3207713 | MS.gene06161:intron | 55.0% |
| !! | CCGTGTTGGTTCTGGAACGA+AGG | + | chr4.2:3207903-3207922 | None:intergenic | 55.0% |
| !! | GGCTTGGTGGTTGAATAGGG+CGG | + | chr4.2:3209559-3209578 | None:intergenic | 55.0% |
| ATCATCCGCCGTGAAGACGG+CGG | - | chr4.2:3207541-3207560 | MS.gene06161:CDS | 60.0% | |
| GACGGCGGATCAGGTTTAGC+AGG | - | chr4.2:3207556-3207575 | MS.gene06161:CDS | 60.0% | |
| GATCGAGCTTCGCGCTGAAC+AGG | - | chr4.2:3207792-3207811 | MS.gene06161:CDS | 60.0% | |
| GGCGGAGCAGCAAAGGACAT+GGG | + | chr4.2:3209541-3209560 | None:intergenic | 60.0% | |
| TTGAACGACGGAAGCTGCGC+CGG | - | chr4.2:3207652-3207671 | MS.gene06161:intron | 60.0% | |
| CTGATCCGCCGTCTTCACGG+CGG | + | chr4.2:3207549-3207568 | None:intergenic | 65.0% | |
| GCCGTCTTCACGGCGGATGA+TGG | + | chr4.2:3207542-3207561 | None:intergenic | 65.0% | |
| GGGCGGAGCAGCAAAGGACA+TGG | + | chr4.2:3209542-3209561 | None:intergenic | 65.0% | |
| CGCCGTGAAGACGGCGGATC+AGG | - | chr4.2:3207547-3207566 | MS.gene06161:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 3207457 | 3210424 | 3207457 | ID=MS.gene06161 |
| chr4.2 | mRNA | 3207457 | 3210424 | 3207457 | ID=MS.gene06161.t1;Parent=MS.gene06161 |
| chr4.2 | exon | 3209960 | 3210424 | 3209960 | ID=MS.gene06161.t1.exon1;Parent=MS.gene06161.t1 |
| chr4.2 | CDS | 3209960 | 3210424 | 3209960 | ID=cds.MS.gene06161.t1;Parent=MS.gene06161.t1 |
| chr4.2 | exon | 3208952 | 3209542 | 3208952 | ID=MS.gene06161.t1.exon2;Parent=MS.gene06161.t1 |
| chr4.2 | CDS | 3208952 | 3209542 | 3208952 | ID=cds.MS.gene06161.t1;Parent=MS.gene06161.t1 |
| chr4.2 | exon | 3208441 | 3208697 | 3208441 | ID=MS.gene06161.t1.exon3;Parent=MS.gene06161.t1 |
| chr4.2 | CDS | 3208441 | 3208697 | 3208441 | ID=cds.MS.gene06161.t1;Parent=MS.gene06161.t1 |
| chr4.2 | exon | 3208114 | 3208243 | 3208114 | ID=MS.gene06161.t1.exon4;Parent=MS.gene06161.t1 |
| chr4.2 | CDS | 3208114 | 3208243 | 3208114 | ID=cds.MS.gene06161.t1;Parent=MS.gene06161.t1 |
| chr4.2 | exon | 3207781 | 3207839 | 3207781 | ID=MS.gene06161.t1.exon5;Parent=MS.gene06161.t1 |
| chr4.2 | CDS | 3207781 | 3207839 | 3207781 | ID=cds.MS.gene06161.t1;Parent=MS.gene06161.t1 |
| chr4.2 | exon | 3207457 | 3207640 | 3207457 | ID=MS.gene06161.t1.exon6;Parent=MS.gene06161.t1 |
| chr4.2 | CDS | 3207457 | 3207640 | 3207457 | ID=cds.MS.gene06161.t1;Parent=MS.gene06161.t1 |
| Gene Sequence |
| Protein sequence |
