Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061775.t1 | XP_013442186.1 | 99.8 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.00E+00 | 1223.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061775.t1 | Q6DGE9 | 37.5 | 88 | 52 | 1 | 408 | 495 | 12 | 96 | 8.4e-07 | 57.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061775.t1 | A0A072TG43 | 99.8 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.0e+00 | 1223.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene061775 | 0.802848 | 4.62E-49 | -1.69E-46 |
| MS.gene050009 | MS.gene061775 | 0.808516 | 2.98E-50 | -1.69E-46 |
| MS.gene050071 | MS.gene061775 | 0.823401 | 1.41E-53 | -1.69E-46 |
| MS.gene050297 | MS.gene061775 | 0.816375 | 5.71E-52 | -1.69E-46 |
| MS.gene050818 | MS.gene061775 | 0.843101 | 1.72E-58 | -1.69E-46 |
| MS.gene050864 | MS.gene061775 | 0.804547 | 2.05E-49 | -1.69E-46 |
| MS.gene050894 | MS.gene061775 | 0.82524 | 5.22E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene061775 | 0.829678 | 4.50E-55 | -1.69E-46 |
| MS.gene051885 | MS.gene061775 | 0.808531 | 2.96E-50 | -1.69E-46 |
| MS.gene052150 | MS.gene061775 | 0.806725 | 7.15E-50 | -1.69E-46 |
| MS.gene052151 | MS.gene061775 | 0.801689 | 8.00E-49 | -1.69E-46 |
| MS.gene054585 | MS.gene061775 | 0.803731 | 3.03E-49 | -1.69E-46 |
| MS.gene054614 | MS.gene061775 | 0.809439 | 1.89E-50 | -1.69E-46 |
| MS.gene054999 | MS.gene061775 | 0.863276 | 2.80E-64 | -1.69E-46 |
| MS.gene055251 | MS.gene061775 | 0.878715 | 2.24E-69 | -1.69E-46 |
| MS.gene055331 | MS.gene061775 | 0.872978 | 2.10E-67 | -1.69E-46 |
| MS.gene056266 | MS.gene061775 | -0.845252 | 4.56E-59 | -1.69E-46 |
| MS.gene058210 | MS.gene061775 | 0.813376 | 2.64E-51 | -1.69E-46 |
| MS.gene058382 | MS.gene061775 | 0.813766 | 2.17E-51 | -1.69E-46 |
| MS.gene058386 | MS.gene061775 | 0.811328 | 7.40E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene061775 | 0.805447 | 1.33E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene061775 | 0.814379 | 1.59E-51 | -1.69E-46 |
| MS.gene060076 | MS.gene061775 | 0.821073 | 4.90E-53 | -1.69E-46 |
| MS.gene06042 | MS.gene061775 | 0.819138 | 1.36E-52 | -1.69E-46 |
| MS.gene061044 | MS.gene061775 | 0.843047 | 1.78E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061775.t1 | MTR_0276s0010 | 99.834 | 602 | 1 | 0 | 1 | 602 | 1 | 602 | 0.0 | 1250 |
| MS.gene061775.t1 | MTR_3g102680 | 51.532 | 555 | 255 | 6 | 8 | 556 | 36 | 582 | 0.0 | 566 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061775.t1 | AT5G10200 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| MS.gene061775.t1 | AT5G10200 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| MS.gene061775.t1 | AT5G10200 | 87.201 | 586 | 66 | 2 | 1 | 585 | 1 | 578 | 0.0 | 1069 |
| MS.gene061775.t1 | AT5G43120 | 45.361 | 582 | 294 | 9 | 11 | 581 | 23 | 591 | 2.56e-174 | 508 |
| MS.gene061775.t1 | AT5G43120 | 46.570 | 554 | 272 | 9 | 11 | 553 | 23 | 563 | 1.26e-173 | 506 |
| MS.gene061775.t1 | AT3G50030 | 43.173 | 542 | 246 | 8 | 8 | 544 | 9 | 493 | 3.58e-139 | 414 |
Find 152 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCATCTGGAAATATTTC+TGG | 0.102747 | 4.3:+10101051 | MS.gene061775:CDS |
| TTTACCTTGTGACATGTATT+TGG | 0.181144 | 4.3:-10100024 | None:intergenic |
| AATAAGGAATGTATATATTT+TGG | 0.230293 | 4.3:-10099345 | None:intergenic |
| AACTAATCGCTCAGCGTAAT+CGG | 0.242598 | 4.3:-10101385 | None:intergenic |
| GTTAGCAAAAGAAAGTTTAT+TGG | 0.248766 | 4.3:+10101290 | MS.gene061775:CDS |
| CCAAGGAACTCATTGCTAAT+TGG | 0.253973 | 4.3:-10099585 | None:intergenic |
| TGCTCGCCTCCAGAGACTTT+TGG | 0.259141 | 4.3:-10101247 | None:intergenic |
| ATTCCCAGCTCTATGAATTC+AGG | 0.267825 | 4.3:-10099259 | None:intergenic |
| CACCACCGTCACCCTGATTA+TGG | 0.279873 | 4.3:-10101467 | None:intergenic |
| GTTCGAAGCAGAGATTAAAA+TGG | 0.285308 | 4.3:+10100950 | MS.gene061775:CDS |
| GAGAACAACTCTCTCCTTCT+TGG | 0.301124 | 4.3:-10101121 | None:intergenic |
| ATGATATGAGCTGCATAATA+AGG | 0.301312 | 4.3:-10099361 | None:intergenic |
| TGGCTATTGATTGTCTTCTA+TGG | 0.301791 | 4.3:+10099989 | MS.gene061775:CDS |
| TTCTCCCTATCAGTGGTCTT+TGG | 0.309537 | 4.3:+10099209 | MS.gene061775:CDS |
| GACAGCTAGTGAAAGTGATA+TGG | 0.315697 | 4.3:+10101527 | MS.gene061775:CDS |
| GCATGGTGGCGTCCATAATC+AGG | 0.330107 | 4.3:+10101455 | MS.gene061775:CDS |
| CTTAATATGTAGATCTTCCT+TGG | 0.340124 | 4.3:-10100986 | None:intergenic |
| TGGTTCCTACACAATGAATA+TGG | 0.343437 | 4.3:+10099384 | MS.gene061775:CDS |
| TTCAGATGATTGGCAGTATA+TGG | 0.344104 | 4.3:+10099969 | MS.gene061775:CDS |
| TTTACCAATATGTTGATAGA+AGG | 0.350454 | 4.3:+10099626 | MS.gene061775:CDS |
| GAGGGTAGCAGTTAGAGCTT+TGG | 0.371302 | 4.3:+10099492 | MS.gene061775:CDS |
| TATTATGCAGCTCATATCAT+TGG | 0.378316 | 4.3:+10099364 | MS.gene061775:CDS |
| CGGCATGGGCGGTGTTGAAA+TGG | 0.381441 | 4.3:+10099678 | MS.gene061775:CDS |
| TTAGCCTTCTATCAACATAT+TGG | 0.382403 | 4.3:-10099630 | None:intergenic |
| GAAAATTCACCAGCTGGTAT+TGG | 0.383617 | 4.3:+10099853 | MS.gene061775:CDS |
| TAGAAATTCTTGCTTGCATA+TGG | 0.385235 | 4.3:-10099794 | None:intergenic |
| GTCTAGGAAGGCCGAGGAAT+GGG | 0.391308 | 4.3:+10099702 | MS.gene061775:CDS |
| AGGGTAGCAGTTAGAGCTTT+GGG | 0.392182 | 4.3:+10099493 | MS.gene061775:CDS |
| CATATGGTAGGAAGAAATTC+CGG | 0.398197 | 4.3:-10099778 | None:intergenic |
| TTGCTCGCTCTTCAGATGAT+TGG | 0.408759 | 4.3:+10099959 | MS.gene061775:CDS |
| GCGATGATGACGACGGTGAT+TGG | 0.412821 | 4.3:+10101565 | MS.gene061775:CDS |
| TTCTAAGAGGTAGGTTGACT+TGG | 0.413383 | 4.3:+10099461 | MS.gene061775:CDS |
| CTCGAGAATTTCACCGTGAC+TGG | 0.417747 | 4.3:-10099554 | None:intergenic |
| CCAATTAGCAATGAGTTCCT+TGG | 0.422140 | 4.3:+10099585 | MS.gene061775:CDS |
| CACAATGCTTCAATAATTCC+AGG | 0.425354 | 4.3:-10099931 | None:intergenic |
| ACTAATCGCTCAGCGTAATC+GGG | 0.426153 | 4.3:-10101384 | None:intergenic |
| ATCGTCATGCCAAAAGTCTC+TGG | 0.426995 | 4.3:+10101238 | MS.gene061775:CDS |
| AATGCATGTCTGCTCTCATA+TGG | 0.429025 | 4.3:+10099287 | MS.gene061775:CDS |
| ACACTTGCTCTGCGTTTGCT+TGG | 0.430357 | 4.3:-10099139 | None:intergenic |
| GTGTTCCAAAGACCACTGAT+AGG | 0.430593 | 4.3:-10099214 | None:intergenic |
| AAATATTTCCAGATGAGAAA+AGG | 0.437915 | 4.3:-10101047 | None:intergenic |
| TGCACGGGTAGCATCACTTA+TGG | 0.449721 | 4.3:-10101193 | None:intergenic |
| CGACGATGACAGGAAAGAAT+AGG | 0.453401 | 4.3:+10101593 | MS.gene061775:CDS |
| GGACCTGTTGCTAGTTGCCC+TGG | 0.461427 | 4.3:+10099913 | MS.gene061775:CDS |
| GGTGACGGTGGTGATATATA+TGG | 0.463445 | 4.3:+10101477 | MS.gene061775:CDS |
| GAGTTGTTCTCTATAGCAAT+CGG | 0.470290 | 4.3:+10101133 | MS.gene061775:CDS |
| CCTTTAGTTGAGCTTCTAAG+AGG | 0.473520 | 4.3:+10099448 | MS.gene061775:CDS |
| TATGTAGGTAATTGATAAAG+TGG | 0.475329 | 4.3:+10100768 | MS.gene061775:intron |
| GCACTGGTTGTCAAGCTTGA+AGG | 0.477662 | 4.3:+10101018 | MS.gene061775:CDS |
| AATATTTCCAGATGAGAAAA+GGG | 0.478637 | 4.3:-10101046 | None:intergenic |
| GTTAATGAAAATTCACCAGC+TGG | 0.484392 | 4.3:+10099847 | MS.gene061775:CDS |
| TGACCCTGAATTCATAGAGC+TGG | 0.484686 | 4.3:+10099255 | MS.gene061775:CDS |
| TTCGAAGCAGAGATTAAAAT+GGG | 0.485000 | 4.3:+10100951 | MS.gene061775:CDS |
| AGAGATCAGGATCATTTGAC+TGG | 0.487652 | 4.3:-10101341 | None:intergenic |
| TATTAAGCAGGCTGCAGCAC+TGG | 0.488628 | 4.3:+10101002 | MS.gene061775:CDS |
| TTCCCAGCTCTATGAATTCA+GGG | 0.490784 | 4.3:-10099258 | None:intergenic |
| ATTCCAGGGCAACTAGCAAC+AGG | 0.491637 | 4.3:-10099916 | None:intergenic |
| CATTCCGAGTCATCAGTCTC+TGG | 0.491761 | 4.3:-10101501 | None:intergenic |
| CAAAAGAAGCATCCTGGGTA+TGG | 0.491996 | 4.3:-10099097 | None:intergenic |
| TTAATATGTAGATCTTCCTT+GGG | 0.495234 | 4.3:-10100985 | None:intergenic |
| GTGTCAAGATGATGATGGTC+AGG | 0.496111 | 4.3:+10099186 | MS.gene061775:CDS |
| GGGCTAGCCAACTGCAATGT+TGG | 0.498049 | 4.3:+10099722 | MS.gene061775:CDS |
| TGCATCGAGACACAAGGGTC+GGG | 0.498166 | 4.3:+10100877 | MS.gene061775:CDS |
| TCTATGAATTCAGGGTCATT+CGG | 0.498186 | 4.3:-10099250 | None:intergenic |
| ACAATTTGTCATCAGAAGCT+TGG | 0.499520 | 4.3:+10099886 | MS.gene061775:CDS |
| GAAAGTGATATGGGAAATGA+TGG | 0.499970 | 4.3:+10101537 | MS.gene061775:CDS |
| TGATCTTCTTACACGCGGCA+TGG | 0.501426 | 4.3:+10099663 | MS.gene061775:CDS |
| AGAGACTGATGACTCGGAAT+GGG | 0.505401 | 4.3:+10101503 | MS.gene061775:CDS |
| ATGACACAAAAGAAGCATCC+TGG | 0.509285 | 4.3:-10099103 | None:intergenic |
| ACAGCTAGTGAAAGTGATAT+GGG | 0.510559 | 4.3:+10101528 | MS.gene061775:CDS |
| CTCTCCTTCTTGGATCTCAT+AGG | 0.510858 | 4.3:-10101111 | None:intergenic |
| TTCACCGTGACTGGCTAAAG+TGG | 0.511711 | 4.3:-10099545 | None:intergenic |
| GGCTAAAGTGGGAAAAGTGC+TGG | 0.517032 | 4.3:-10099533 | None:intergenic |
| GTTGACTTGGGTTGAGCAGA+GGG | 0.523039 | 4.3:+10099474 | MS.gene061775:CDS |
| CAGAGACTGATGACTCGGAA+TGG | 0.524761 | 4.3:+10101502 | MS.gene061775:CDS |
| GACCCTGAATTCATAGAGCT+GGG | 0.530003 | 4.3:+10099256 | MS.gene061775:CDS |
| AGAAGCAGATGCGTGCTGCT+TGG | 0.530091 | 4.3:+10101409 | MS.gene061775:CDS |
| CTTAATAAGCCAATACCAGC+TGG | 0.532024 | 4.3:-10099862 | None:intergenic |
| ATTGGAATAACGACGATGAC+AGG | 0.533512 | 4.3:+10101583 | MS.gene061775:CDS |
| GGAAGATCTACATATTAAGC+AGG | 0.534911 | 4.3:+10100990 | MS.gene061775:CDS |
| TTCTTCCATATTCATTGTGT+AGG | 0.537968 | 4.3:-10099389 | None:intergenic |
| TTTGTCATCAGAAGCTTGGT+AGG | 0.539277 | 4.3:+10099890 | MS.gene061775:CDS |
| GCACAAGCTTATGACATGCT+AGG | 0.540972 | 4.3:+10101267 | MS.gene061775:CDS |
| CTTCTTACACGCGGCATGGG+CGG | 0.541650 | 4.3:+10099667 | MS.gene061775:CDS |
| TCCGCAAGGTCAACTAATGC+AGG | 0.542050 | 4.3:-10100793 | None:intergenic |
| CCTCTTAGAAGCTCAACTAA+AGG | 0.542272 | 4.3:-10099448 | None:intergenic |
| GATCTTCTTACACGCGGCAT+GGG | 0.543576 | 4.3:+10099664 | MS.gene061775:CDS |
| TCTAAGAGGTAGGTTGACTT+GGG | 0.544283 | 4.3:+10099462 | MS.gene061775:CDS |
| ATCAAAATACTCAGAAGCAT+TGG | 0.544343 | 4.3:+10101080 | MS.gene061775:CDS |
| GATATGGGAAATGATGGAAT+TGG | 0.544935 | 4.3:+10101543 | MS.gene061775:CDS |
| CACAAGCTTATGACATGCTA+GGG | 0.553569 | 4.3:+10101268 | MS.gene061775:CDS |
| TTGTCATCAGAAGCTTGGTA+GGG | 0.554096 | 4.3:+10099891 | MS.gene061775:CDS |
| TGCTGCTTGGTTATTTCGAG+AGG | 0.554603 | 4.3:+10101422 | MS.gene061775:CDS |
| TAACAAAACTACCTGGCATG+TGG | 0.556418 | 4.3:+10099815 | MS.gene061775:CDS |
| AACAAAACTACCTGGCATGT+GGG | 0.557380 | 4.3:+10099816 | MS.gene061775:CDS |
| ACAAGACCACCCCACATGCC+AGG | 0.559253 | 4.3:-10099826 | None:intergenic |
| AGTCTAGGAAGGCCGAGGAA+TGG | 0.560531 | 4.3:+10099701 | MS.gene061775:CDS |
| CAAGATTGCATCGAGACACA+AGG | 0.563325 | 4.3:+10100871 | MS.gene061775:CDS |
| AGTTGTTCTCTATAGCAATC+GGG | 0.563923 | 4.3:+10101134 | MS.gene061775:CDS |
| TCGCACTAAAGAACAGATAG+AGG | 0.568924 | 4.3:+10100918 | MS.gene061775:CDS |
| CTTGCGGAGATTACAACTCT+AGG | 0.571036 | 4.3:+10100808 | MS.gene061775:CDS |
| TGTTCCAAAGACCACTGATA+GGG | 0.571674 | 4.3:-10099213 | None:intergenic |
| ATCTTGAAGAACACTGACAA+TGG | 0.574244 | 4.3:-10100854 | None:intergenic |
| TGTCATCAGAAGCTTGGTAG+GGG | 0.574943 | 4.3:+10099892 | MS.gene061775:CDS |
| TAGTTGAGCTTCTAAGAGGT+AGG | 0.575441 | 4.3:+10099452 | MS.gene061775:CDS |
| GTCTGTGGAGACATAGTGCA+CGG | 0.575568 | 4.3:-10101209 | None:intergenic |
| GGCGTCCATAATCAGGGTGA+CGG | 0.576294 | 4.3:+10101462 | MS.gene061775:CDS |
| GCAGAAAGTTCTGTGCATGC+TGG | 0.577817 | 4.3:+10099415 | MS.gene061775:CDS |
| CACTGTGATCTTCTTACACG+CGG | 0.580191 | 4.3:+10099658 | MS.gene061775:CDS |
| TGACACAAAAGAAGCATCCT+GGG | 0.582906 | 4.3:-10099102 | None:intergenic |
| AATTCTTGCTTGCATATGGT+AGG | 0.583132 | 4.3:-10099790 | None:intergenic |
| CGAGAGGCAGCTGTTAAGCA+TGG | 0.584903 | 4.3:+10101438 | MS.gene061775:CDS |
| GGTTGACTTGGGTTGAGCAG+AGG | 0.586421 | 4.3:+10099473 | MS.gene061775:CDS |
| CTTAGAAGCTCAACTAAAGG+AGG | 0.588830 | 4.3:-10099445 | None:intergenic |
| GAAGAGACCAACATTGCAGT+TGG | 0.590523 | 4.3:-10099729 | None:intergenic |
| CATGGTGGCGTCCATAATCA+GGG | 0.591600 | 4.3:+10101456 | MS.gene061775:CDS |
| AAGCATGGATAAAGTTTCAT+CGG | 0.592980 | 4.3:+10099069 | None:intergenic |
| GCGGTGTTGAAATGGAGTCT+AGG | 0.598414 | 4.3:+10099686 | MS.gene061775:CDS |
| CAGTTGGCTAGCCCATTCCT+CGG | 0.603223 | 4.3:-10099713 | None:intergenic |
| CTTCCGTGTCAAGATGATGA+TGG | 0.604349 | 4.3:+10099181 | MS.gene061775:CDS |
| TTGCATCGAGACACAAGGGT+CGG | 0.605332 | 4.3:+10100876 | MS.gene061775:CDS |
| TGTTGAAATGGAGTCTAGGA+AGG | 0.605706 | 4.3:+10099690 | MS.gene061775:CDS |
| GTGTCCTATGAGATCCAAGA+AGG | 0.606913 | 4.3:+10101107 | MS.gene061775:CDS |
| ACAATGCTTCAATAATTCCA+GGG | 0.608618 | 4.3:-10099930 | None:intergenic |
| GTGTGAATAAACTATTTCCA+AGG | 0.609966 | 4.3:-10099602 | None:intergenic |
| TTTCCCACTTTAGCCAGTCA+CGG | 0.611995 | 4.3:+10099541 | MS.gene061775:CDS |
| ACAAAACTACCTGGCATGTG+GGG | 0.615879 | 4.3:+10099817 | MS.gene061775:CDS |
| GGTCAGGTTCTCCCTATCAG+TGG | 0.617990 | 4.3:+10099202 | MS.gene061775:CDS |
| ATGTCTGCTCTCATATGGAA+AGG | 0.618281 | 4.3:+10099292 | MS.gene061775:CDS |
| AATGGAGTCTAGGAAGGCCG+AGG | 0.620005 | 4.3:+10099696 | MS.gene061775:CDS |
| GCATCACTTATGGCAGCCAA+AGG | 0.625977 | 4.3:-10101183 | None:intergenic |
| TCACCGTGACTGGCTAAAGT+GGG | 0.627571 | 4.3:-10099544 | None:intergenic |
| GAGATCAGGATCATTTGACT+GGG | 0.629493 | 4.3:-10101340 | None:intergenic |
| AAGGACTGAAGAATCGACGC+TGG | 0.632880 | 4.3:+10099311 | MS.gene061775:CDS |
| TGGTCCAGAGACTGATGACT+CGG | 0.634939 | 4.3:+10101497 | MS.gene061775:CDS |
| AAACTACCTGGCATGTGGGG+TGG | 0.640971 | 4.3:+10099820 | MS.gene061775:CDS |
| TGGTCTTTGGAACACAGCAA+TGG | 0.643301 | 4.3:+10099222 | MS.gene061775:CDS |
| GAATTTCTAACAAAACTACC+TGG | 0.643669 | 4.3:+10099808 | MS.gene061775:CDS |
| ATGGGAAAAGAATATGCCCA+AGG | 0.649974 | 4.3:+10100969 | MS.gene061775:CDS |
| GTCCATAATCAGGGTGACGG+TGG | 0.652767 | 4.3:+10101465 | MS.gene061775:CDS |
| TCATCGGACTGTCCATACCC+AGG | 0.655137 | 4.3:+10099085 | MS.gene061775:CDS |
| CTAGAGTTGTAATCTCCGCA+AGG | 0.661496 | 4.3:-10100807 | None:intergenic |
| GCCTGCATTAGTTGACCTTG+CGG | 0.662681 | 4.3:+10100792 | MS.gene061775:CDS |
| AGATCCAAATACATGTCACA+AGG | 0.671859 | 4.3:+10100020 | MS.gene061775:CDS |
| TCTGTGGAGACATAGTGCAC+GGG | 0.677330 | 4.3:-10101208 | None:intergenic |
| GAGGCAGCTGTTAAGCATGG+TGG | 0.678228 | 4.3:+10101441 | MS.gene061775:CDS |
| GTCATGCCAAAAGTCTCTGG+AGG | 0.684030 | 4.3:+10101241 | MS.gene061775:CDS |
| AAGATTGCATCGAGACACAA+GGG | 0.684193 | 4.3:+10100872 | MS.gene061775:CDS |
| CATGACGATTGACAGGTCTG+TGG | 0.690518 | 4.3:-10101224 | None:intergenic |
| TGACCATCATCATCTTGACA+CGG | 0.697231 | 4.3:-10099184 | None:intergenic |
| GGAATTGGCGATGATGACGA+CGG | 0.760960 | 4.3:+10101558 | MS.gene061775:CDS |
| ATGATCCTGATCTCTCACTG+AGG | 0.765682 | 4.3:+10101349 | MS.gene061775:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATATATAAAACAAAGAA+AGG | - | chr4.3:10100466-10100485 | None:intergenic | 10.0% |
| !! | ATTCATTTAGAAATAAAAGT+AGG | + | chr4.3:10100280-10100299 | MS.gene061775:intron | 15.0% |
| !!! | AATAAGGAATGTATATATTT+TGG | - | chr4.3:10099348-10099367 | None:intergenic | 15.0% |
| !! | ACTTTAATTCATCTAGAAAT+TGG | + | chr4.3:10100209-10100228 | MS.gene061775:intron | 20.0% |
| ! | AAATATTTCCAGATGAGAAA+AGG | - | chr4.3:10101050-10101069 | None:intergenic | 25.0% |
| ! | AATATTTCCAGATGAGAAAA+GGG | - | chr4.3:10101049-10101068 | None:intergenic | 25.0% |
| ! | ATGAAAGCAATGATCAAATA+AGG | - | chr4.3:10100661-10100680 | None:intergenic | 25.0% |
| ! | CATCTAAAAACATTGATGTA+TGG | + | chr4.3:10100502-10100521 | MS.gene061775:intron | 25.0% |
| ! | GTTAGCAAAAGAAAGTTTAT+TGG | + | chr4.3:10101290-10101309 | MS.gene061775:CDS | 25.0% |
| ! | TATGTAGGTAATTGATAAAG+TGG | + | chr4.3:10100768-10100787 | MS.gene061775:intron | 25.0% |
| ! | TTAATATGTAGATCTTCCTT+GGG | - | chr4.3:10100988-10101007 | None:intergenic | 25.0% |
| !! | TTTACCAATATGTTGATAGA+AGG | + | chr4.3:10099626-10099645 | MS.gene061775:CDS | 25.0% |
| !!! | CAATGTTTTTAGATGTTCAA+TGG | - | chr4.3:10100497-10100516 | None:intergenic | 25.0% |
| !!! | TAATTGCTTTGCTTTTAAAC+CGG | + | chr4.3:10099759-10099778 | MS.gene061775:CDS | 25.0% |
| AAAGCAATGATCAAATAAGG+AGG | - | chr4.3:10100658-10100677 | None:intergenic | 30.0% | |
| ACAATGCTTCAATAATTCCA+GGG | - | chr4.3:10099933-10099952 | None:intergenic | 30.0% | |
| ATGATATGAGCTGCATAATA+AGG | - | chr4.3:10099364-10099383 | None:intergenic | 30.0% | |
| ATGTATATATCTCGTAGTGA+AGG | - | chr4.3:10100346-10100365 | None:intergenic | 30.0% | |
| ATTTGCACTCTTGAACATTA+AGG | + | chr4.3:10100110-10100129 | MS.gene061775:intron | 30.0% | |
| ATTTGTTTACTTTAACGCCT+TGG | + | chr4.3:10100738-10100757 | MS.gene061775:intron | 30.0% | |
| CTTAAACTTAGTTATCACTG+CGG | + | chr4.3:10100561-10100580 | MS.gene061775:intron | 30.0% | |
| CTTAATATGTAGATCTTCCT+TGG | - | chr4.3:10100989-10101008 | None:intergenic | 30.0% | |
| GAAAAGGAGAAAACAAAGAA+AGG | + | chr4.3:10100406-10100425 | MS.gene061775:intron | 30.0% | |
| GAATTTCTAACAAAACTACC+TGG | + | chr4.3:10099808-10099827 | MS.gene061775:CDS | 30.0% | |
| GTGTGAATAAACTATTTCCA+AGG | - | chr4.3:10099605-10099624 | None:intergenic | 30.0% | |
| TACCTACATAATATATGCCA+AGG | - | chr4.3:10100758-10100777 | None:intergenic | 30.0% | |
| TAGAAATTCTTGCTTGCATA+TGG | - | chr4.3:10099797-10099816 | None:intergenic | 30.0% | |
| TATTATGCAGCTCATATCAT+TGG | + | chr4.3:10099364-10099383 | MS.gene061775:CDS | 30.0% | |
| TTCGAAGCAGAGATTAAAAT+GGG | + | chr4.3:10100951-10100970 | MS.gene061775:CDS | 30.0% | |
| TTCTCATCTGGAAATATTTC+TGG | + | chr4.3:10101051-10101070 | MS.gene061775:CDS | 30.0% | |
| TTCTTCCATATTCATTGTGT+AGG | - | chr4.3:10099392-10099411 | None:intergenic | 30.0% | |
| TTTACCTTGTGACATGTATT+TGG | - | chr4.3:10100027-10100046 | None:intergenic | 30.0% | |
| ! | AAGAGTGCAAATGAATACAT+TGG | - | chr4.3:10100102-10100121 | None:intergenic | 30.0% |
| ! | ATCAAAATACTCAGAAGCAT+TGG | + | chr4.3:10101080-10101099 | MS.gene061775:CDS | 30.0% |
| ! | TTAGCCTTCTATCAACATAT+TGG | - | chr4.3:10099633-10099652 | None:intergenic | 30.0% |
| ! | TTCTGTTTCTTAGTGTGAAA+AGG | + | chr4.3:10100390-10100409 | MS.gene061775:intron | 30.0% |
| AATTCTTGCTTGCATATGGT+AGG | - | chr4.3:10099793-10099812 | None:intergenic | 35.0% | |
| ACAATTTGTCATCAGAAGCT+TGG | + | chr4.3:10099886-10099905 | MS.gene061775:CDS | 35.0% | |
| ACAGCTAGTGAAAGTGATAT+GGG | + | chr4.3:10101528-10101547 | MS.gene061775:CDS | 35.0% | |
| ACTCAACAGTCTACAGAAAT+CGG | - | chr4.3:10100694-10100713 | None:intergenic | 35.0% | |
| AGATCCAAATACATGTCACA+AGG | + | chr4.3:10100020-10100039 | MS.gene061775:CDS | 35.0% | |
| AGTTGTTCTCTATAGCAATC+GGG | + | chr4.3:10101134-10101153 | MS.gene061775:CDS | 35.0% | |
| ATCTTGAAGAACACTGACAA+TGG | - | chr4.3:10100857-10100876 | None:intergenic | 35.0% | |
| CACAATGCTTCAATAATTCC+AGG | - | chr4.3:10099934-10099953 | None:intergenic | 35.0% | |
| CATATGGTAGGAAGAAATTC+CGG | - | chr4.3:10099781-10099800 | None:intergenic | 35.0% | |
| CTAGGTGATCATAAAAAGCT+TGG | + | chr4.3:10100826-10100845 | MS.gene061775:CDS | 35.0% | |
| GAAAGTGATATGGGAAATGA+TGG | + | chr4.3:10101537-10101556 | MS.gene061775:CDS | 35.0% | |
| GAACAAATGCAAGGTTACAA+AGG | - | chr4.3:10100051-10100070 | None:intergenic | 35.0% | |
| GAGTTGTTCTCTATAGCAAT+CGG | + | chr4.3:10101133-10101152 | MS.gene061775:CDS | 35.0% | |
| GGAAGATCTACATATTAAGC+AGG | + | chr4.3:10100990-10101009 | MS.gene061775:CDS | 35.0% | |
| GTTAATGAAAATTCACCAGC+TGG | + | chr4.3:10099847-10099866 | MS.gene061775:CDS | 35.0% | |
| GTTCGAAGCAGAGATTAAAA+TGG | + | chr4.3:10100950-10100969 | MS.gene061775:CDS | 35.0% | |
| TAATGATTCAGCTCATGTGT+AGG | + | chr4.3:10100535-10100554 | MS.gene061775:intron | 35.0% | |
| TATATACATATCACACCGCT+TGG | + | chr4.3:10100357-10100376 | MS.gene061775:intron | 35.0% | |
| TCTATGAATTCAGGGTCATT+CGG | - | chr4.3:10099253-10099272 | None:intergenic | 35.0% | |
| TGGTTCCTACACAATGAATA+TGG | + | chr4.3:10099384-10099403 | MS.gene061775:CDS | 35.0% | |
| TTCAGATGATTGGCAGTATA+TGG | + | chr4.3:10099969-10099988 | MS.gene061775:CDS | 35.0% | |
| ! | AAATTGGCTTAGCATGTGAA+TGG | + | chr4.3:10100225-10100244 | MS.gene061775:intron | 35.0% |
| ! | ATGCTTCTTTTGTGTCATGA+AGG | + | chr4.3:10099108-10099127 | MS.gene061775:CDS | 35.0% |
| ! | CAGTCTGTAGCTTTTCATTT+AGG | + | chr4.3:10100314-10100333 | MS.gene061775:intron | 35.0% |
| ! | GATATGGGAAATGATGGAAT+TGG | + | chr4.3:10101543-10101562 | MS.gene061775:CDS | 35.0% |
| ! | TGGCTATTGATTGTCTTCTA+TGG | + | chr4.3:10099989-10100008 | MS.gene061775:CDS | 35.0% |
| AACAAAACTACCTGGCATGT+GGG | + | chr4.3:10099816-10099835 | MS.gene061775:CDS | 40.0% | |
| AACTAATCGCTCAGCGTAAT+CGG | - | chr4.3:10101388-10101407 | None:intergenic | 40.0% | |
| AAGATTGCATCGAGACACAA+GGG | + | chr4.3:10100872-10100891 | MS.gene061775:CDS | 40.0% | |
| AATGCATGTCTGCTCTCATA+TGG | + | chr4.3:10099287-10099306 | MS.gene061775:CDS | 40.0% | |
| ACTGTTGAGTTCTCTTCACT+AGG | + | chr4.3:10100704-10100723 | MS.gene061775:intron | 40.0% | |
| AGAGATCAGGATCATTTGAC+TGG | - | chr4.3:10101344-10101363 | None:intergenic | 40.0% | |
| ATGGGAAAAGAATATGCCCA+AGG | + | chr4.3:10100969-10100988 | MS.gene061775:CDS | 40.0% | |
| ATGTCTGCTCTCATATGGAA+AGG | + | chr4.3:10099292-10099311 | MS.gene061775:CDS | 40.0% | |
| ATTCCCAGCTCTATGAATTC+AGG | - | chr4.3:10099262-10099281 | None:intergenic | 40.0% | |
| ATTGGAATAACGACGATGAC+AGG | + | chr4.3:10101583-10101602 | MS.gene061775:CDS | 40.0% | |
| CAAACATGTGAGTCCAAACA+TGG | - | chr4.3:10100597-10100616 | None:intergenic | 40.0% | |
| CACAAGCTTATGACATGCTA+GGG | + | chr4.3:10101268-10101287 | MS.gene061775:CDS | 40.0% | |
| CAGAAATATGTCACACCAAG+CGG | - | chr4.3:10100375-10100394 | None:intergenic | 40.0% | |
| CATGTTTGGACTCACATGTT+TGG | + | chr4.3:10100595-10100614 | MS.gene061775:intron | 40.0% | |
| CCAAGGAACTCATTGCTAAT+TGG | - | chr4.3:10099588-10099607 | None:intergenic | 40.0% | |
| CCAATTAGCAATGAGTTCCT+TGG | + | chr4.3:10099585-10099604 | MS.gene061775:CDS | 40.0% | |
| CCTCTTAGAAGCTCAACTAA+AGG | - | chr4.3:10099451-10099470 | None:intergenic | 40.0% | |
| CCTTTAGTTGAGCTTCTAAG+AGG | + | chr4.3:10099448-10099467 | MS.gene061775:CDS | 40.0% | |
| CGCCTTGGCATATATTATGT+AGG | + | chr4.3:10100753-10100772 | MS.gene061775:intron | 40.0% | |
| CTGTTGAGTTCTCTTCACTA+GGG | + | chr4.3:10100705-10100724 | MS.gene061775:intron | 40.0% | |
| CTTAATAAGCCAATACCAGC+TGG | - | chr4.3:10099865-10099884 | None:intergenic | 40.0% | |
| CTTAGAAGCTCAACTAAAGG+AGG | - | chr4.3:10099448-10099467 | None:intergenic | 40.0% | |
| GAAAATTCACCAGCTGGTAT+TGG | + | chr4.3:10099853-10099872 | MS.gene061775:CDS | 40.0% | |
| GACAGCTAGTGAAAGTGATA+TGG | + | chr4.3:10101527-10101546 | MS.gene061775:CDS | 40.0% | |
| GAGATCAGGATCATTTGACT+GGG | - | chr4.3:10101343-10101362 | None:intergenic | 40.0% | |
| TAACAAAACTACCTGGCATG+TGG | + | chr4.3:10099815-10099834 | MS.gene061775:CDS | 40.0% | |
| TCGCACTAAAGAACAGATAG+AGG | + | chr4.3:10100918-10100937 | MS.gene061775:CDS | 40.0% | |
| TGACCATCATCATCTTGACA+CGG | - | chr4.3:10099187-10099206 | None:intergenic | 40.0% | |
| TGTAACCTTGCATTTGTTCC+TGG | + | chr4.3:10100052-10100071 | MS.gene061775:intron | 40.0% | |
| TGTTCCAAAGACCACTGATA+GGG | - | chr4.3:10099216-10099235 | None:intergenic | 40.0% | |
| TGTTGAAATGGAGTCTAGGA+AGG | + | chr4.3:10099690-10099709 | MS.gene061775:CDS | 40.0% | |
| TTCCCAGCTCTATGAATTCA+GGG | - | chr4.3:10099261-10099280 | None:intergenic | 40.0% | |
| TTGTCATCAGAAGCTTGGTA+GGG | + | chr4.3:10099891-10099910 | MS.gene061775:CDS | 40.0% | |
| TTTGTCATCAGAAGCTTGGT+AGG | + | chr4.3:10099890-10099909 | MS.gene061775:CDS | 40.0% | |
| ! | GGAAATTCCCTTTTCTCATC+TGG | + | chr4.3:10101039-10101058 | MS.gene061775:CDS | 40.0% |
| ! | TAGTTGAGCTTCTAAGAGGT+AGG | + | chr4.3:10099452-10099471 | MS.gene061775:CDS | 40.0% |
| ! | TCTAAGAGGTAGGTTGACTT+GGG | + | chr4.3:10099462-10099481 | MS.gene061775:CDS | 40.0% |
| ! | TCTTTTGCTGCAACAACCTT+TGG | + | chr4.3:10101167-10101186 | MS.gene061775:CDS | 40.0% |
| ! | TTCTAAGAGGTAGGTTGACT+TGG | + | chr4.3:10099461-10099480 | MS.gene061775:CDS | 40.0% |
| !! | ATGACACAAAAGAAGCATCC+TGG | - | chr4.3:10099106-10099125 | None:intergenic | 40.0% |
| !! | TGACACAAAAGAAGCATCCT+GGG | - | chr4.3:10099105-10099124 | None:intergenic | 40.0% |
| ACAAAACTACCTGGCATGTG+GGG | + | chr4.3:10099817-10099836 | MS.gene061775:CDS | 45.0% | |
| ACTAATCGCTCAGCGTAATC+GGG | - | chr4.3:10101387-10101406 | None:intergenic | 45.0% | |
| AGGGTAGCAGTTAGAGCTTT+GGG | + | chr4.3:10099493-10099512 | MS.gene061775:CDS | 45.0% | |
| ATCGTCATGCCAAAAGTCTC+TGG | + | chr4.3:10101238-10101257 | MS.gene061775:CDS | 45.0% | |
| ATGATCCTGATCTCTCACTG+AGG | + | chr4.3:10101349-10101368 | MS.gene061775:CDS | 45.0% | |
| CAAGATTGCATCGAGACACA+AGG | + | chr4.3:10100871-10100890 | MS.gene061775:CDS | 45.0% | |
| CACTGTGATCTTCTTACACG+CGG | + | chr4.3:10099658-10099677 | MS.gene061775:CDS | 45.0% | |
| CAGAACCAGGAACAAATGCA+AGG | - | chr4.3:10100060-10100079 | None:intergenic | 45.0% | |
| CGGCAATTGCTAACCATGTT+TGG | + | chr4.3:10100581-10100600 | MS.gene061775:intron | 45.0% | |
| CTAGAGTTGTAATCTCCGCA+AGG | - | chr4.3:10100810-10100829 | None:intergenic | 45.0% | |
| CTCTCCTTCTTGGATCTCAT+AGG | - | chr4.3:10101114-10101133 | None:intergenic | 45.0% | |
| CTGTCTTAGGCATGAATGCT+TGG | + | chr4.3:10100144-10100163 | MS.gene061775:intron | 45.0% | |
| CTTCCGTGTCAAGATGATGA+TGG | + | chr4.3:10099181-10099200 | MS.gene061775:CDS | 45.0% | |
| CTTGCGGAGATTACAACTCT+AGG | + | chr4.3:10100808-10100827 | MS.gene061775:CDS | 45.0% | |
| GAAGAGACCAACATTGCAGT+TGG | - | chr4.3:10099732-10099751 | None:intergenic | 45.0% | |
| GACCCTGAATTCATAGAGCT+GGG | + | chr4.3:10099256-10099275 | MS.gene061775:CDS | 45.0% | |
| GAGAACAACTCTCTCCTTCT+TGG | - | chr4.3:10101124-10101143 | None:intergenic | 45.0% | |
| GCACAAGCTTATGACATGCT+AGG | + | chr4.3:10101267-10101286 | MS.gene061775:CDS | 45.0% | |
| GTGTCCTATGAGATCCAAGA+AGG | + | chr4.3:10101107-10101126 | MS.gene061775:CDS | 45.0% | |
| GTGTTCCAAAGACCACTGAT+AGG | - | chr4.3:10099217-10099236 | None:intergenic | 45.0% | |
| TGACCCTGAATTCATAGAGC+TGG | + | chr4.3:10099255-10099274 | MS.gene061775:CDS | 45.0% | |
| TGCTTGGCTTAGCATGTGAA+TGG | + | chr4.3:10100160-10100179 | MS.gene061775:intron | 45.0% | |
| TGTCATCAGAAGCTTGGTAG+GGG | + | chr4.3:10099892-10099911 | MS.gene061775:CDS | 45.0% | |
| TTCTCCCTATCAGTGGTCTT+TGG | + | chr4.3:10099209-10099228 | MS.gene061775:CDS | 45.0% | |
| TTGCTCGCTCTTCAGATGAT+TGG | + | chr4.3:10099959-10099978 | MS.gene061775:CDS | 45.0% | |
| TTTCCCACTTTAGCCAGTCA+CGG | + | chr4.3:10099541-10099560 | MS.gene061775:CDS | 45.0% | |
| ! | AGAGACTGATGACTCGGAAT+GGG | + | chr4.3:10101503-10101522 | MS.gene061775:CDS | 45.0% |
| ! | CTTTTGGCATGACGATTGAC+AGG | - | chr4.3:10101234-10101253 | None:intergenic | 45.0% |
| ! | GGAACTCTACTGACTGTCTT+AGG | + | chr4.3:10100131-10100150 | MS.gene061775:intron | 45.0% |
| ! | GGTGACGGTGGTGATATATA+TGG | + | chr4.3:10101477-10101496 | MS.gene061775:CDS | 45.0% |
| ! | TGCTGCTTGGTTATTTCGAG+AGG | + | chr4.3:10101422-10101441 | MS.gene061775:CDS | 45.0% |
| ! | TTTTGCCTCAGTGAGAGATC+AGG | - | chr4.3:10101357-10101376 | None:intergenic | 45.0% |
| !! | CAAAAGAAGCATCCTGGGTA+TGG | - | chr4.3:10099100-10099119 | None:intergenic | 45.0% |
| !! | GTGTCAAGATGATGATGGTC+AGG | + | chr4.3:10099186-10099205 | MS.gene061775:CDS | 45.0% |
| !! | TGGTCTTTGGAACACAGCAA+TGG | + | chr4.3:10099222-10099241 | MS.gene061775:CDS | 45.0% |
| AAGGACTGAAGAATCGACGC+TGG | + | chr4.3:10099311-10099330 | MS.gene061775:CDS | 50.0% | |
| ACACTTGCTCTGCGTTTGCT+TGG | - | chr4.3:10099142-10099161 | None:intergenic | 50.0% | |
| ATTCCAGGGCAACTAGCAAC+AGG | - | chr4.3:10099919-10099938 | None:intergenic | 50.0% | |
| CAGTCTACAGAAATCGGTGC+TGG | - | chr4.3:10100688-10100707 | None:intergenic | 50.0% | |
| CATGACGATTGACAGGTCTG+TGG | - | chr4.3:10101227-10101246 | None:intergenic | 50.0% | |
| CATTCCGAGTCATCAGTCTC+TGG | - | chr4.3:10101504-10101523 | None:intergenic | 50.0% | |
| CCAGTTGAAGTAGCAGAACC+AGG | - | chr4.3:10100073-10100092 | None:intergenic | 50.0% | |
| CTCGAGAATTTCACCGTGAC+TGG | - | chr4.3:10099557-10099576 | None:intergenic | 50.0% | |
| GAGGGTAGCAGTTAGAGCTT+TGG | + | chr4.3:10099492-10099511 | MS.gene061775:CDS | 50.0% | |
| GATCTTCTTACACGCGGCAT+GGG | + | chr4.3:10099664-10099683 | MS.gene061775:CDS | 50.0% | |
| GCAGAAAGTTCTGTGCATGC+TGG | + | chr4.3:10099415-10099434 | MS.gene061775:CDS | 50.0% | |
| GCATCACTTATGGCAGCCAA+AGG | - | chr4.3:10101186-10101205 | None:intergenic | 50.0% | |
| GCCTGCATTAGTTGACCTTG+CGG | + | chr4.3:10100792-10100811 | MS.gene061775:CDS | 50.0% | |
| GTCATGCCAAAAGTCTCTGG+AGG | + | chr4.3:10101241-10101260 | MS.gene061775:CDS | 50.0% | |
| GTCTGTGGAGACATAGTGCA+CGG | - | chr4.3:10101212-10101231 | None:intergenic | 50.0% | |
| TATTAAGCAGGCTGCAGCAC+TGG | + | chr4.3:10101002-10101021 | MS.gene061775:CDS | 50.0% | |
| TCCGCAAGGTCAACTAATGC+AGG | - | chr4.3:10100796-10100815 | None:intergenic | 50.0% | |
| TCTGTGGAGACATAGTGCAC+GGG | - | chr4.3:10101211-10101230 | None:intergenic | 50.0% | |
| TGATCTTCTTACACGCGGCA+TGG | + | chr4.3:10099663-10099682 | MS.gene061775:CDS | 50.0% | |
| TGCACGGGTAGCATCACTTA+TGG | - | chr4.3:10101196-10101215 | None:intergenic | 50.0% | |
| TGGTCCAGAGACTGATGACT+CGG | + | chr4.3:10101497-10101516 | MS.gene061775:CDS | 50.0% | |
| TTGCATCGAGACACAAGGGT+CGG | + | chr4.3:10100876-10100895 | MS.gene061775:CDS | 50.0% | |
| ! | CAGAGACTGATGACTCGGAA+TGG | + | chr4.3:10101502-10101521 | MS.gene061775:CDS | 50.0% |
| ! | CATGGTGGCGTCCATAATCA+GGG | + | chr4.3:10101456-10101475 | MS.gene061775:CDS | 50.0% |
| ! | GCGGTGTTGAAATGGAGTCT+AGG | + | chr4.3:10099686-10099705 | MS.gene061775:CDS | 50.0% |
| ! | GGAATTGGCGATGATGACGA+CGG | + | chr4.3:10101558-10101577 | MS.gene061775:CDS | 50.0% |
| ! | GGCTAAAGTGGGAAAAGTGC+TGG | - | chr4.3:10099536-10099555 | None:intergenic | 50.0% |
| ! | TCACCGTGACTGGCTAAAGT+GGG | - | chr4.3:10099547-10099566 | None:intergenic | 50.0% |
| ! | TTCACCGTGACTGGCTAAAG+TGG | - | chr4.3:10099548-10099567 | None:intergenic | 50.0% |
| !! | CCTGGTTCTGCTACTTCAAC+TGG | + | chr4.3:10100070-10100089 | MS.gene061775:intron | 50.0% |
| !! | GCACTGGTTGTCAAGCTTGA+AGG | + | chr4.3:10101018-10101037 | MS.gene061775:CDS | 50.0% |
| !! | GTTGACTTGGGTTGAGCAGA+GGG | + | chr4.3:10099474-10099493 | MS.gene061775:CDS | 50.0% |
| AAACTACCTGGCATGTGGGG+TGG | + | chr4.3:10099820-10099839 | MS.gene061775:CDS | 55.0% | |
| AATGGAGTCTAGGAAGGCCG+AGG | + | chr4.3:10099696-10099715 | MS.gene061775:CDS | 55.0% | |
| AGTCTAGGAAGGCCGAGGAA+TGG | + | chr4.3:10099701-10099720 | MS.gene061775:CDS | 55.0% | |
| CACCACCGTCACCCTGATTA+TGG | - | chr4.3:10101470-10101489 | None:intergenic | 55.0% | |
| CGAGAGGCAGCTGTTAAGCA+TGG | + | chr4.3:10101438-10101457 | MS.gene061775:CDS | 55.0% | |
| GAGGCAGCTGTTAAGCATGG+TGG | + | chr4.3:10101441-10101460 | MS.gene061775:CDS | 55.0% | |
| GGCGTCCATAATCAGGGTGA+CGG | + | chr4.3:10101462-10101481 | MS.gene061775:CDS | 55.0% | |
| GGTCAGGTTCTCCCTATCAG+TGG | + | chr4.3:10099202-10099221 | MS.gene061775:CDS | 55.0% | |
| GTCTAGGAAGGCCGAGGAAT+GGG | + | chr4.3:10099702-10099721 | MS.gene061775:CDS | 55.0% | |
| TCATCGGACTGTCCATACCC+AGG | + | chr4.3:10099085-10099104 | MS.gene061775:CDS | 55.0% | |
| TGCATCGAGACACAAGGGTC+GGG | + | chr4.3:10100877-10100896 | MS.gene061775:CDS | 55.0% | |
| ! | AGAAGCAGATGCGTGCTGCT+TGG | + | chr4.3:10101409-10101428 | MS.gene061775:CDS | 55.0% |
| ! | CAGTTGGCTAGCCCATTCCT+CGG | - | chr4.3:10099716-10099735 | None:intergenic | 55.0% |
| ! | GCATGGTGGCGTCCATAATC+AGG | + | chr4.3:10101455-10101474 | MS.gene061775:CDS | 55.0% |
| ! | GCGATGATGACGACGGTGAT+TGG | + | chr4.3:10101565-10101584 | MS.gene061775:CDS | 55.0% |
| ! | GTCCATAATCAGGGTGACGG+TGG | + | chr4.3:10101465-10101484 | MS.gene061775:CDS | 55.0% |
| ! | TGCTCGCCTCCAGAGACTTT+TGG | - | chr4.3:10101250-10101269 | None:intergenic | 55.0% |
| !! | GGGCTAGCCAACTGCAATGT+TGG | + | chr4.3:10099722-10099741 | MS.gene061775:CDS | 55.0% |
| !! | GGTTGACTTGGGTTGAGCAG+AGG | + | chr4.3:10099473-10099492 | MS.gene061775:CDS | 55.0% |
| ACAAGACCACCCCACATGCC+AGG | - | chr4.3:10099829-10099848 | None:intergenic | 60.0% | |
| CTTCTTACACGCGGCATGGG+CGG | + | chr4.3:10099667-10099686 | MS.gene061775:CDS | 60.0% | |
| GGACCTGTTGCTAGTTGCCC+TGG | + | chr4.3:10099913-10099932 | MS.gene061775:CDS | 60.0% | |
| ! | CGGCATGGGCGGTGTTGAAA+TGG | + | chr4.3:10099678-10099697 | MS.gene061775:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 10099073 | 10101614 | 10099073 | ID=MS.gene061775 |
| chr4.3 | mRNA | 10099073 | 10101614 | 10099073 | ID=MS.gene061775.t1;Parent=MS.gene061775 |
| chr4.3 | exon | 10099073 | 10100041 | 10099073 | ID=MS.gene061775.t1.exon1;Parent=MS.gene061775.t1 |
| chr4.3 | CDS | 10099073 | 10100041 | 10099073 | ID=cds.MS.gene061775.t1;Parent=MS.gene061775.t1 |
| chr4.3 | exon | 10100775 | 10101614 | 10100775 | ID=MS.gene061775.t1.exon2;Parent=MS.gene061775.t1 |
| chr4.3 | CDS | 10100775 | 10101614 | 10100775 | ID=cds.MS.gene061775.t1;Parent=MS.gene061775.t1 |
| Gene Sequence |
| Protein sequence |
