Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064522.t1 | XP_003616291.1 | 92.8 | 883 | 62 | 1 | 1 | 883 | 106 | 986 | 0.00E+00 | 1441 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064522.t1 | Q0WNW4 | 43.5 | 441 | 196 | 10 | 425 | 861 | 272 | 663 | 7.9e-46 | 187.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064522.t1 | G7K1Q1 | 92.8 | 883 | 62 | 1 | 1 | 883 | 106 | 986 | 0.0e+00 | 1441.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene064522 | 0.82715 | 1.83E-54 | -1.69E-46 |
| MS.gene049350 | MS.gene064522 | 0.813886 | 2.04E-51 | -1.69E-46 |
| MS.gene049418 | MS.gene064522 | 0.806807 | 6.87E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene064522 | 0.828148 | 1.06E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene064522 | 0.809361 | 1.97E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene064522 | 0.805748 | 1.15E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene064522 | 0.81708 | 3.97E-52 | -1.69E-46 |
| MS.gene051018 | MS.gene064522 | 0.820682 | 6.03E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene064522 | 0.803907 | 2.79E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene064522 | 0.821236 | 4.50E-53 | -1.69E-46 |
| MS.gene051388 | MS.gene064522 | 0.8293 | 5.56E-55 | -1.69E-46 |
| MS.gene05157 | MS.gene064522 | 0.816012 | 6.89E-52 | -1.69E-46 |
| MS.gene051664 | MS.gene064522 | 0.80702 | 6.20E-50 | -1.69E-46 |
| MS.gene051700 | MS.gene064522 | 0.820169 | 7.91E-53 | -1.69E-46 |
| MS.gene051719 | MS.gene064522 | 0.8342 | 3.44E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene064522 | 0.84282 | 2.05E-58 | -1.69E-46 |
| MS.gene051744 | MS.gene064522 | 0.809949 | 1.47E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene064522 | 0.823197 | 1.58E-53 | -1.69E-46 |
| MS.gene052732 | MS.gene064522 | 0.830503 | 2.83E-55 | -1.69E-46 |
| MS.gene053122 | MS.gene064522 | 0.800169 | 1.64E-48 | -1.69E-46 |
| MS.gene053144 | MS.gene064522 | 0.862213 | 5.94E-64 | -1.69E-46 |
| MS.gene053226 | MS.gene064522 | 0.819336 | 1.22E-52 | -1.69E-46 |
| MS.gene053536 | MS.gene064522 | 0.812134 | 4.94E-51 | -1.69E-46 |
| MS.gene053538 | MS.gene064522 | 0.806803 | 6.89E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene064522 | 0.807119 | 5.91E-50 | -1.69E-46 |
| MS.gene053621 | MS.gene064522 | 0.801311 | 9.56E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene064522 | 0.87698 | 9.07E-69 | -1.69E-46 |
| MS.gene055465 | MS.gene064522 | 0.863166 | 3.02E-64 | -1.69E-46 |
| MS.gene055466 | MS.gene064522 | 0.86047 | 2.02E-63 | -1.69E-46 |
| MS.gene055468 | MS.gene064522 | 0.853429 | 2.40E-61 | -1.69E-46 |
| MS.gene055469 | MS.gene064522 | 0.862823 | 3.86E-64 | -1.69E-46 |
| MS.gene055513 | MS.gene064522 | 0.820904 | 5.36E-53 | -1.69E-46 |
| MS.gene055537 | MS.gene064522 | 0.880808 | 4.05E-70 | -1.69E-46 |
| MS.gene055580 | MS.gene064522 | -0.862314 | 5.53E-64 | -1.69E-46 |
| MS.gene055891 | MS.gene064522 | 0.811906 | 5.54E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene064522 | -0.84925 | 3.65E-60 | -1.69E-46 |
| MS.gene056308 | MS.gene064522 | 0.834549 | 2.81E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene064522 | 0.808563 | 2.91E-50 | -1.69E-46 |
| MS.gene057294 | MS.gene064522 | 0.819 | 1.46E-52 | -1.69E-46 |
| MS.gene057915 | MS.gene064522 | 0.815097 | 1.10E-51 | -1.69E-46 |
| MS.gene058087 | MS.gene064522 | 0.828801 | 7.35E-55 | -1.69E-46 |
| MS.gene058339 | MS.gene064522 | 0.808036 | 3.77E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene064522 | 0.802746 | 4.85E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene064522 | 0.845638 | 3.59E-59 | -1.69E-46 |
| MS.gene05894 | MS.gene064522 | 0.801489 | 8.79E-49 | -1.69E-46 |
| MS.gene059426 | MS.gene064522 | 0.828922 | 6.87E-55 | -1.69E-46 |
| MS.gene059570 | MS.gene064522 | 0.808697 | 2.73E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene064522 | 0.810124 | 1.35E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene064522 | 0.828488 | 8.74E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064522.t1 | MTR_5g078300 | 96.829 | 883 | 26 | 1 | 1 | 883 | 106 | 986 | 0.0 | 1726 |
| MS.gene064522.t1 | MTR_1g070350 | 35.606 | 396 | 219 | 12 | 476 | 862 | 496 | 864 | 1.43e-39 | 158 |
| MS.gene064522.t1 | MTR_7g115350 | 34.336 | 399 | 215 | 14 | 475 | 862 | 504 | 866 | 4.86e-34 | 141 |
| MS.gene064522.t1 | MTR_0168s0060 | 61.616 | 99 | 38 | 0 | 514 | 612 | 331 | 429 | 5.91e-23 | 104 |
| MS.gene064522.t1 | MTR_4g107310 | 48.611 | 144 | 68 | 3 | 469 | 612 | 290 | 427 | 4.56e-16 | 82.8 |
| MS.gene064522.t1 | MTR_4g011540 | 49.485 | 97 | 49 | 0 | 514 | 610 | 286 | 382 | 5.48e-16 | 82.0 |
| MS.gene064522.t1 | MTR_4g011550 | 48.352 | 91 | 47 | 0 | 521 | 611 | 281 | 371 | 7.10e-16 | 82.4 |
| MS.gene064522.t1 | MTR_4g093150 | 37.037 | 108 | 68 | 0 | 509 | 616 | 68 | 175 | 2.15e-14 | 73.6 |
| MS.gene064522.t1 | MTR_7g107000 | 37.097 | 124 | 75 | 1 | 497 | 620 | 53 | 173 | 2.81e-14 | 77.0 |
| MS.gene064522.t1 | MTR_1g054835 | 28.191 | 376 | 201 | 13 | 517 | 853 | 65 | 410 | 4.55e-14 | 76.3 |
| MS.gene064522.t1 | MTR_4g130400 | 40.952 | 105 | 62 | 0 | 514 | 618 | 6 | 110 | 1.41e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064522.t1 | AT5G16720 | 46.212 | 396 | 170 | 7 | 467 | 861 | 310 | 663 | 1.57e-87 | 293 |
| MS.gene064522.t1 | AT1G70750 | 47.453 | 373 | 155 | 11 | 496 | 861 | 400 | 738 | 4.29e-73 | 255 |
| MS.gene064522.t1 | AT1G08800 | 54.015 | 137 | 57 | 3 | 476 | 612 | 858 | 988 | 5.45e-30 | 128 |
| MS.gene064522.t1 | AT1G08800 | 54.015 | 137 | 57 | 3 | 476 | 612 | 858 | 988 | 5.45e-30 | 128 |
| MS.gene064522.t1 | AT1G08800 | 54.015 | 137 | 57 | 3 | 476 | 612 | 858 | 988 | 5.45e-30 | 128 |
| MS.gene064522.t1 | AT1G08800 | 54.015 | 137 | 57 | 3 | 476 | 612 | 858 | 988 | 5.45e-30 | 128 |
| MS.gene064522.t1 | AT2G30690 | 60.784 | 102 | 40 | 0 | 514 | 615 | 613 | 714 | 4.28e-27 | 118 |
| MS.gene064522.t1 | AT2G30690 | 60.784 | 102 | 40 | 0 | 514 | 615 | 613 | 714 | 4.28e-27 | 118 |
| MS.gene064522.t1 | AT1G74830 | 40.000 | 210 | 118 | 2 | 514 | 723 | 302 | 503 | 8.01e-26 | 113 |
| MS.gene064522.t1 | AT1G18990 | 60.185 | 108 | 41 | 1 | 503 | 610 | 292 | 397 | 1.34e-21 | 100 |
| MS.gene064522.t1 | AT4G13630 | 41.135 | 141 | 69 | 3 | 481 | 617 | 195 | 325 | 1.09e-17 | 88.2 |
| MS.gene064522.t1 | AT4G13630 | 41.135 | 141 | 69 | 3 | 481 | 617 | 195 | 325 | 1.09e-17 | 88.2 |
| MS.gene064522.t1 | AT5G06560 | 40.000 | 100 | 60 | 0 | 517 | 616 | 74 | 173 | 6.99e-16 | 82.0 |
| MS.gene064522.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 520 | 620 | 77 | 177 | 2.11e-15 | 80.1 |
| MS.gene064522.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 520 | 620 | 77 | 177 | 2.11e-15 | 80.1 |
| MS.gene064522.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 520 | 620 | 77 | 177 | 2.11e-15 | 80.1 |
| MS.gene064522.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 520 | 620 | 77 | 177 | 2.11e-15 | 80.1 |
| MS.gene064522.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 520 | 620 | 29 | 129 | 2.51e-15 | 79.3 |
| MS.gene064522.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 520 | 620 | 29 | 129 | 2.51e-15 | 79.3 |
| MS.gene064522.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 520 | 620 | 29 | 129 | 2.51e-15 | 79.3 |
| MS.gene064522.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 520 | 620 | 29 | 129 | 2.51e-15 | 79.3 |
| MS.gene064522.t1 | AT1G04890 | 42.969 | 128 | 70 | 2 | 486 | 611 | 82 | 208 | 2.15e-14 | 76.6 |
| MS.gene064522.t1 | AT4G13160 | 47.872 | 94 | 49 | 0 | 517 | 610 | 117 | 210 | 1.96e-13 | 72.4 |
Find 123 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTGTTGAAGCCTTCT+TGG | 0.160198 | 5.2:-66430500 | MS.gene064522:CDS |
| GTGAAAATTGCTTGGCTTCT+AGG | 0.206836 | 5.2:-66430674 | MS.gene064522:CDS |
| CTTGTTCTTCCATCATTCTT+TGG | 0.217588 | 5.2:+66428276 | None:intergenic |
| AAGCAACCAATTGTTCTTCT+TGG | 0.220911 | 5.2:+66427744 | None:intergenic |
| ACAGATAAGGAGGGTAAATT+TGG | 0.246430 | 5.2:+66430514 | None:intergenic |
| TGTTTACCTTGTGCATTATC+TGG | 0.252484 | 5.2:+66429769 | None:intergenic |
| TCTGCTGACCTAGGAGTTTC+AGG | 0.253809 | 5.2:+66428587 | None:intergenic |
| ATCCGACAATGACAGAAATT+TGG | 0.280174 | 5.2:-66429452 | MS.gene064522:CDS |
| CAGAAATTTGGAAGCAGATA+TGG | 0.283479 | 5.2:-66429440 | MS.gene064522:CDS |
| TTCTCTGCTTCATCTAAATA+TGG | 0.289720 | 5.2:+66427705 | None:intergenic |
| CAATGTGAAACCTGCATAAT+AGG | 0.290320 | 5.2:+66430171 | None:intergenic |
| ATAGAATCTATTAGCTTAAC+AGG | 0.302400 | 5.2:+66430075 | None:intergenic |
| CATGAGAAACATGATGAAAA+TGG | 0.306053 | 5.2:-66430582 | MS.gene064522:CDS |
| GATGGAGCTTGAAGAAAGTT+TGG | 0.320863 | 5.2:-66429890 | MS.gene064522:CDS |
| AGAATTTCTCCAACATTGTA+TGG | 0.334868 | 5.2:-66427511 | MS.gene064522:CDS |
| ATCACTTGAAATCATCAATA+TGG | 0.336778 | 5.2:-66430139 | MS.gene064522:CDS |
| AGAGGAAGTATTGATCAAAA+TGG | 0.367658 | 5.2:-66429938 | MS.gene064522:CDS |
| AGAAGGAATTGGAAGAGTAT+AGG | 0.372537 | 5.2:-66428178 | MS.gene064522:CDS |
| TGATGATACCGTTTCTAACT+TGG | 0.372874 | 5.2:-66427985 | MS.gene064522:CDS |
| CTATCCATTTCACTTATCAT+AGG | 0.373876 | 5.2:+66427603 | None:intergenic |
| GAAGGAATTGGAAGAGTATA+GGG | 0.377022 | 5.2:-66428177 | MS.gene064522:CDS |
| AGAGGAAAAGATAATTTCAT+TGG | 0.377885 | 5.2:-66427859 | MS.gene064522:CDS |
| TGAATTACGCCTTAAGAACT+TGG | 0.379118 | 5.2:-66427409 | MS.gene064522:CDS |
| GCAAGAACTTGAGAAGGAAT+TGG | 0.385367 | 5.2:-66428189 | MS.gene064522:CDS |
| CACAAAGAAGACTATTCTAA+TGG | 0.388166 | 5.2:-66427789 | MS.gene064522:CDS |
| AAAATGGAGAGAGTTTAAAT+AGG | 0.391672 | 5.2:-66430566 | MS.gene064522:CDS |
| GTAGTTCAAATTTCTGTGAA+TGG | 0.392563 | 5.2:-66429823 | MS.gene064522:CDS |
| CATGAAACTGAAAACTCATT+TGG | 0.392989 | 5.2:-66430642 | MS.gene064522:CDS |
| AGATCAACTCAAAGCATTAG+AGG | 0.392996 | 5.2:-66427877 | MS.gene064522:CDS |
| GATCATTGTCCAAGTTCTTA+AGG | 0.394095 | 5.2:+66427400 | None:intergenic |
| TTGTAATCATTGCCATTGTT+TGG | 0.398108 | 5.2:+66428345 | None:intergenic |
| TTCCAAATTTCTGTCATTGT+CGG | 0.401114 | 5.2:+66429450 | None:intergenic |
| AAACTTGAACTCTGATGAAA+AGG | 0.403932 | 5.2:-66430265 | MS.gene064522:CDS |
| TGTATGGGATCCATACAAAA+TGG | 0.406925 | 5.2:-66427495 | MS.gene064522:CDS |
| TTCTGATGCTCCTATTATGC+AGG | 0.413743 | 5.2:-66430181 | MS.gene064522:CDS |
| CTCTTTGAGAAAACAGAATC+AGG | 0.416556 | 5.2:-66428533 | MS.gene064522:CDS |
| AGTTCCTATGATAAGTGAAA+TGG | 0.425926 | 5.2:-66427607 | MS.gene064522:CDS |
| TCTATATCTTTAGAAGTTGA+AGG | 0.427647 | 5.2:-66429862 | MS.gene064522:CDS |
| AAGAAGAACAATTGGTTGCT+TGG | 0.429766 | 5.2:-66427742 | MS.gene064522:CDS |
| ACGCTTGATTGCGGTTCAAT+CGG | 0.430956 | 5.2:+66429967 | None:intergenic |
| ATTTGCATTTGATAGAGAAT+TGG | 0.437319 | 5.2:-66427664 | MS.gene064522:CDS |
| TATTAACCGTTCAACGTCAA+TGG | 0.441249 | 5.2:+66430098 | None:intergenic |
| GTTAGAAACGGTATCATCAT+TGG | 0.443026 | 5.2:+66427989 | None:intergenic |
| TGCACACAAGAAGATGAATC+TGG | 0.444733 | 5.2:-66429559 | MS.gene064522:CDS |
| TAGTACTTTAGAAGAATTTG+AGG | 0.444834 | 5.2:-66427919 | MS.gene064522:CDS |
| CAGTGTAAATGATAATGAAA+TGG | 0.445770 | 5.2:-66428705 | MS.gene064522:CDS |
| AGCCGGTCGATTGTTAAAAC+CGG | 0.449648 | 5.2:+66428458 | None:intergenic |
| TGAGGATCTAGAGGAGGAGA+AGG | 0.452240 | 5.2:-66430019 | MS.gene064522:CDS |
| TTGAAGCCTTCTTGGTATGA+TGG | 0.459164 | 5.2:-66430492 | MS.gene064522:CDS |
| TTCACCAAGCAAAGACTTGT+AGG | 0.462618 | 5.2:-66427355 | None:intergenic |
| CAATCTCCAAGAAGAACAAT+TGG | 0.464940 | 5.2:-66427750 | MS.gene064522:CDS |
| AAGATAATTTCATTGGAAGA+TGG | 0.470072 | 5.2:-66427852 | MS.gene064522:CDS |
| CGGTTCAATCGGTGACTCAC+TGG | 0.470776 | 5.2:+66429978 | None:intergenic |
| TGAATCATGCAAATTGAATG+AGG | 0.474317 | 5.2:-66430037 | MS.gene064522:CDS |
| GATGAGAGTTCATCAAGATA+TGG | 0.474936 | 5.2:-66427816 | MS.gene064522:CDS |
| AGCACTGAGAGCTCTTTGTT+CGG | 0.478445 | 5.2:+66428418 | None:intergenic |
| TATGCCTACAAGTCTTTGCT+TGG | 0.481502 | 5.2:+66427351 | None:intergenic |
| AACTGAACTCGATCGATCCT+CGG | 0.488164 | 5.2:+66430290 | None:intergenic |
| CAAGAAGGCTTCAACAGATA+AGG | 0.490047 | 5.2:+66430501 | None:intergenic |
| ACTCATTTGGTATGAGACAT+AGG | 0.495233 | 5.2:-66430629 | MS.gene064522:CDS |
| AGAAGAACATGATCATGATC+AGG | 0.495368 | 5.2:-66430379 | MS.gene064522:CDS |
| TACAAGGCTGCAGGAAGAAA+AGG | 0.495890 | 5.2:-66428327 | MS.gene064522:CDS |
| TGAATGCAACTTAACTATAG+TGG | 0.498253 | 5.2:+66427374 | None:intergenic |
| GAGTAGGTTGGTTCTTCAGA+TGG | 0.507610 | 5.2:+66428977 | None:intergenic |
| ATGTTGAGAAGAATGAAAGA+TGG | 0.509499 | 5.2:-66428116 | MS.gene064522:CDS |
| ATAAACTTCCTGAAACTCCT+AGG | 0.514133 | 5.2:-66428595 | MS.gene064522:CDS |
| TCTTGTTCTTGTTGCAACAC+CGG | 0.514596 | 5.2:-66428071 | MS.gene064522:CDS |
| GGCAATGATTACAAGGCTGC+AGG | 0.518083 | 5.2:-66428336 | MS.gene064522:CDS |
| AGGTTGATCGCGTTTATGAC+AGG | 0.518142 | 5.2:-66427557 | MS.gene064522:CDS |
| TGATACCGTTTCTAACTTGG+AGG | 0.518834 | 5.2:-66427982 | MS.gene064522:CDS |
| ATACAAAATGGTGGTGATGA+AGG | 0.519176 | 5.2:-66427483 | MS.gene064522:CDS |
| TGCATTATCTGGTTCTTCTG+TGG | 0.527662 | 5.2:+66429780 | None:intergenic |
| TGACAGTTCATCGGTGTAGC+CGG | 0.531224 | 5.2:+66428052 | None:intergenic |
| AGAAAAGGCGGCAATGCAGA+TGG | 0.535335 | 5.2:-66428312 | MS.gene064522:CDS |
| CATTTCATTATCATTTACAC+TGG | 0.540128 | 5.2:+66428706 | None:intergenic |
| CCATCAATCATCAAAATGCT+CGG | 0.540613 | 5.2:-66428639 | MS.gene064522:CDS |
| CTATATCTTTAGAAGTTGAA+GGG | 0.544204 | 5.2:-66429861 | MS.gene064522:CDS |
| GTATGGATCCCATACAATGT+TGG | 0.545411 | 5.2:+66427502 | None:intergenic |
| TGCAGAGAAAACAAACATGA+TGG | 0.549690 | 5.2:-66429908 | MS.gene064522:CDS |
| AGAGAAGCAAGAACTTGAGA+AGG | 0.550787 | 5.2:-66428195 | MS.gene064522:CDS |
| GAAAGTGTGTATTGAAGAAG+AGG | 0.550976 | 5.2:-66427577 | MS.gene064522:CDS |
| TCAATAGAAGATGACAAAGA+AGG | 0.551727 | 5.2:-66430435 | MS.gene064522:CDS |
| AAATGGTGGTGATGAAGGAA+AGG | 0.555471 | 5.2:-66427478 | MS.gene064522:CDS |
| GGATGGTAGCGTTGCAAGTG+AGG | 0.560662 | 5.2:-66428495 | MS.gene064522:CDS |
| ATTGAATTTGAGATAAACAA+TGG | 0.561453 | 5.2:-66430402 | MS.gene064522:CDS |
| GATGGAAACTATTTAAGCAA+AGG | 0.562706 | 5.2:-66430474 | MS.gene064522:CDS |
| TATTCTCAGAGAGGTGGCCG+AGG | 0.563232 | 5.2:-66430307 | MS.gene064522:CDS |
| ATTACAATACCAAAGAATGA+TGG | 0.564697 | 5.2:-66428285 | MS.gene064522:CDS |
| GAATTTCTCCAACATTGTAT+GGG | 0.568122 | 5.2:-66427510 | MS.gene064522:CDS |
| ACAAAGCCATTGACGTTGAA+CGG | 0.568420 | 5.2:-66430104 | MS.gene064522:CDS |
| ATAAAATCATCAACAGCACT+TGG | 0.569946 | 5.2:+66430213 | None:intergenic |
| TTTGGTATGAGACATAGGAT+TGG | 0.570047 | 5.2:-66430624 | MS.gene064522:CDS |
| TGAGGTAGAATACAGCGATC+CGG | 0.570543 | 5.2:-66428477 | MS.gene064522:CDS |
| TATCTCCTCCAAGTTAGAAA+CGG | 0.572085 | 5.2:+66427977 | None:intergenic |
| TAGTTTCCATCATACCAAGA+AGG | 0.574251 | 5.2:+66430486 | None:intergenic |
| TGCAACTTAACTATAGTGGA+TGG | 0.575938 | 5.2:+66427378 | None:intergenic |
| TAGCATGTGTGAAAATTGCT+TGG | 0.580838 | 5.2:-66430682 | None:intergenic |
| CAAATTGAATGAGGATCTAG+AGG | 0.582974 | 5.2:-66430028 | MS.gene064522:CDS |
| TGACATGCATTGACTTGAGT+AGG | 0.583561 | 5.2:+66428961 | None:intergenic |
| GAAGGCTTCAACAGATAAGG+AGG | 0.588495 | 5.2:+66430504 | None:intergenic |
| GCAATCAAGCGTCTTAGAAG+AGG | 0.588801 | 5.2:-66429956 | MS.gene064522:CDS |
| AAACAATGGCAATGATTACA+AGG | 0.589570 | 5.2:-66428343 | MS.gene064522:CDS |
| ACTTGCAACGCTACCATCCA+CGG | 0.593320 | 5.2:+66428499 | None:intergenic |
| TGATCATGATCAGGATGAAG+AGG | 0.593848 | 5.2:-66430370 | MS.gene064522:CDS |
| TTGGTTAGTAGCTATTGCTG+AGG | 0.595521 | 5.2:+66428364 | None:intergenic |
| ATGCATTGACTTGAGTAGGT+TGG | 0.596080 | 5.2:+66428965 | None:intergenic |
| AAGATCAACTGACAGTTCAT+CGG | 0.602771 | 5.2:+66428043 | None:intergenic |
| TCTTCTAAGACGCTTGATTG+CGG | 0.606157 | 5.2:+66429958 | None:intergenic |
| TAGGTTGGTTCTTCAGATGG+AGG | 0.608490 | 5.2:+66428980 | None:intergenic |
| TGCATTGCATCTGCTGACCT+AGG | 0.622751 | 5.2:+66428578 | None:intergenic |
| TGTTTCTCATGACTTAACCA+TGG | 0.628154 | 5.2:+66430594 | None:intergenic |
| GGAGCAGAAGAATCCGTGGA+TGG | 0.629443 | 5.2:-66428512 | MS.gene064522:CDS |
| ATGCAATGCACTACATGCAG+AGG | 0.632820 | 5.2:-66428565 | MS.gene064522:CDS |
| ATCAGGAGCAGAAGAATCCG+TGG | 0.633581 | 5.2:-66428516 | MS.gene064522:CDS |
| AATAGCTACTAACCAAACAA+TGG | 0.642191 | 5.2:-66428357 | MS.gene064522:CDS |
| ATCTTCTTCAAGTGACAGTG+AGG | 0.656914 | 5.2:-66428930 | MS.gene064522:CDS |
| TGGATCAAGTGATGATGATG+AGG | 0.658998 | 5.2:-66429539 | MS.gene064522:CDS |
| ATTGAATGAGGATCTAGAGG+AGG | 0.663122 | 5.2:-66430025 | MS.gene064522:CDS |
| GAACAAGAAAATGCTCCACC+AGG | 0.665638 | 5.2:-66429415 | MS.gene064522:intron |
| AAGGCTTCAACAGATAAGGA+GGG | 0.667591 | 5.2:+66430505 | None:intergenic |
| AAGGCTGCAGGAAGAAAAGG+CGG | 0.674245 | 5.2:-66428324 | MS.gene064522:CDS |
| GAAGAACCAGATAATGCACA+AGG | 0.705101 | 5.2:-66429775 | MS.gene064522:intron |
| ATGGGATCCATACAAAATGG+TGG | 0.735054 | 5.2:-66427492 | MS.gene064522:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTAGATAGATTGAAAAA+AGG | + | chr5.2:66429274-66429293 | None:intergenic | 20.0% |
| !! | GAATGATCATATTAGATATA+TGG | - | chr5.2:66428375-66428394 | MS.gene064522:CDS | 20.0% |
| !! | TTATGAAATTTGCAAATTCT+TGG | - | chr5.2:66428401-66428420 | MS.gene064522:CDS | 20.0% |
| !!! | ATTGAATTTGAGATAAACAA+TGG | - | chr5.2:66427632-66427651 | MS.gene064522:CDS | 20.0% |
| ! | AAAATGGAGAGAGTTTAAAT+AGG | - | chr5.2:66427468-66427487 | MS.gene064522:CDS | 25.0% |
| ! | AAGATAATTTCATTGGAAGA+TGG | - | chr5.2:66430182-66430201 | MS.gene064522:CDS | 25.0% |
| ! | AATAAACTGAAAACAGTCTA+TGG | + | chr5.2:66428825-66428844 | None:intergenic | 25.0% |
| ! | AATATCAGCTGAAAAAATTG+AGG | - | chr5.2:66429362-66429381 | MS.gene064522:intron | 25.0% |
| ! | AGAGGAAAAGATAATTTCAT+TGG | - | chr5.2:66430175-66430194 | MS.gene064522:CDS | 25.0% |
| ! | ATCACTTGAAATCATCAATA+TGG | - | chr5.2:66427895-66427914 | MS.gene064522:CDS | 25.0% |
| ! | ATTACAATACCAAAGAATGA+TGG | - | chr5.2:66429749-66429768 | MS.gene064522:intron | 25.0% |
| ! | ATTTGCATTTGATAGAGAAT+TGG | - | chr5.2:66430370-66430389 | MS.gene064522:CDS | 25.0% |
| ! | CATGAATTATTAATACCGTT+TGG | + | chr5.2:66429004-66429023 | None:intergenic | 25.0% |
| ! | CATTTCATTATCATTTACAC+TGG | + | chr5.2:66429331-66429350 | None:intergenic | 25.0% |
| ! | CTTAATTTATCACACATGTT+TGG | - | chr5.2:66428727-66428746 | MS.gene064522:intron | 25.0% |
| ! | GTACTAGATATAAAAACTCA+CGG | + | chr5.2:66429182-66429201 | None:intergenic | 25.0% |
| ! | TGATCATATTAGATATATGG+TGG | - | chr5.2:66428378-66428397 | MS.gene064522:CDS | 25.0% |
| !! | ATAGAATCTATTAGCTTAAC+AGG | + | chr5.2:66427962-66427981 | None:intergenic | 25.0% |
| !! | CAGTGTAAATGATAATGAAA+TGG | - | chr5.2:66429329-66429348 | MS.gene064522:intron | 25.0% |
| !! | CTATATCTTTAGAAGTTGAA+GGG | - | chr5.2:66428173-66428192 | MS.gene064522:CDS | 25.0% |
| !! | TAGTACTTTAGAAGAATTTG+AGG | - | chr5.2:66430115-66430134 | MS.gene064522:CDS | 25.0% |
| !! | TCTATATCTTTAGAAGTTGA+AGG | - | chr5.2:66428172-66428191 | MS.gene064522:CDS | 25.0% |
| !! | TTTTCAGTTTCATGATGATT+TGG | + | chr5.2:66427386-66427405 | None:intergenic | 25.0% |
| !!! | ATCATTTACACTGGTTTTAT+CGG | + | chr5.2:66429322-66429341 | None:intergenic | 25.0% |
| !!! | CTGAGAAATGAATTTTTCAA+AGG | + | chr5.2:66428536-66428555 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAAACTATTC+TGG | + | chr5.2:66428860-66428879 | None:intergenic | 25.0% |
| AAACAATGGCAATGATTACA+AGG | - | chr5.2:66429691-66429710 | MS.gene064522:intron | 30.0% | |
| AAACTTGAACTCTGATGAAA+AGG | - | chr5.2:66427769-66427788 | MS.gene064522:CDS | 30.0% | |
| AACAGAAACATGTTATGCAA+AGG | + | chr5.2:66428355-66428374 | None:intergenic | 30.0% | |
| AATAGCTACTAACCAAACAA+TGG | - | chr5.2:66429677-66429696 | MS.gene064522:intron | 30.0% | |
| AATTCAGATGTTCATCCAAA+CGG | - | chr5.2:66428986-66429005 | MS.gene064522:CDS | 30.0% | |
| AGAATTTCTCCAACATTGTA+TGG | - | chr5.2:66430523-66430542 | MS.gene064522:CDS | 30.0% | |
| AGAGTATAGGGAAAAAGTTA+TGG | - | chr5.2:66429869-66429888 | MS.gene064522:CDS | 30.0% | |
| AGTTCCTATGATAAGTGAAA+TGG | - | chr5.2:66430427-66430446 | MS.gene064522:CDS | 30.0% | |
| ATAAAATCATCAACAGCACT+TGG | + | chr5.2:66427824-66427843 | None:intergenic | 30.0% | |
| ATGTTGAGAAGAATGAAAGA+TGG | - | chr5.2:66429918-66429937 | MS.gene064522:CDS | 30.0% | |
| CACAAAGAAGACTATTCTAA+TGG | - | chr5.2:66430245-66430264 | MS.gene064522:CDS | 30.0% | |
| CATGAAACTGAAAACTCATT+TGG | - | chr5.2:66427392-66427411 | MS.gene064522:CDS | 30.0% | |
| CATGAGAAACATGATGAAAA+TGG | - | chr5.2:66427452-66427471 | MS.gene064522:CDS | 30.0% | |
| CTATCCATTTCACTTATCAT+AGG | + | chr5.2:66430434-66430453 | None:intergenic | 30.0% | |
| GAATTTCTCCAACATTGTAT+GGG | - | chr5.2:66430524-66430543 | MS.gene064522:CDS | 30.0% | |
| GATGGAAACTATTTAAGCAA+AGG | - | chr5.2:66427560-66427579 | MS.gene064522:CDS | 30.0% | |
| GTAGTTCAAATTTCTGTGAA+TGG | - | chr5.2:66428211-66428230 | MS.gene064522:CDS | 30.0% | |
| TCAATAGAAGATGACAAAGA+AGG | - | chr5.2:66427599-66427618 | MS.gene064522:CDS | 30.0% | |
| TGAATCATGCAAATTGAATG+AGG | - | chr5.2:66427997-66428016 | MS.gene064522:CDS | 30.0% | |
| TGAATGCAACTTAACTATAG+TGG | + | chr5.2:66430663-66430682 | None:intergenic | 30.0% | |
| TTCCAAATTTCTGTCATTGT+CGG | + | chr5.2:66428587-66428606 | None:intergenic | 30.0% | |
| TTCTCTGCTTCATCTAAATA+TGG | + | chr5.2:66430332-66430351 | None:intergenic | 30.0% | |
| TTGTAATCATTGCCATTGTT+TGG | + | chr5.2:66429692-66429711 | None:intergenic | 30.0% | |
| TTTATCACACATGTTTGGAT+CGG | - | chr5.2:66428732-66428751 | MS.gene064522:intron | 30.0% | |
| ! | TGCTTGATGTATAGAGTTTT+TGG | - | chr5.2:66428293-66428312 | MS.gene064522:CDS | 30.0% |
| ! | TTCAGCTGATATTGTTTTCT+CGG | + | chr5.2:66429355-66429374 | None:intergenic | 30.0% |
| !! | AGAGGAAGTATTGATCAAAA+TGG | - | chr5.2:66428096-66428115 | MS.gene064522:CDS | 30.0% |
| !!! | ATAGGATTGGTTTTATTCCA+TGG | - | chr5.2:66427423-66427442 | MS.gene064522:CDS | 30.0% |
| !!! | TGAAAGTTTTATTCTCAGAG+AGG | - | chr5.2:66427718-66427737 | MS.gene064522:CDS | 30.0% |
| AAGAAGAACAATTGGTTGCT+TGG | - | chr5.2:66430292-66430311 | MS.gene064522:CDS | 35.0% | |
| AAGATCAACTGACAGTTCAT+CGG | + | chr5.2:66429994-66430013 | None:intergenic | 35.0% | |
| AAGCAACCAATTGTTCTTCT+TGG | + | chr5.2:66430293-66430312 | None:intergenic | 35.0% | |
| ACAGATAAGGAGGGTAAATT+TGG | + | chr5.2:66427523-66427542 | None:intergenic | 35.0% | |
| ACTCATTTGGTATGAGACAT+AGG | - | chr5.2:66427405-66427424 | MS.gene064522:CDS | 35.0% | |
| AGAAGAACATGATCATGATC+AGG | - | chr5.2:66427655-66427674 | MS.gene064522:CDS | 35.0% | |
| AGAATTGAGTGCTTCACAAT+TGG | + | chr5.2:66429232-66429251 | None:intergenic | 35.0% | |
| ATAAACTTCCTGAAACTCCT+AGG | - | chr5.2:66429439-66429458 | MS.gene064522:CDS | 35.0% | |
| ATCAGCTGAAAAAATTGAGG+AGG | - | chr5.2:66429365-66429384 | MS.gene064522:intron | 35.0% | |
| ATCCGACAATGACAGAAATT+TGG | - | chr5.2:66428582-66428601 | MS.gene064522:CDS | 35.0% | |
| CAAATTGAATGAGGATCTAG+AGG | - | chr5.2:66428006-66428025 | MS.gene064522:CDS | 35.0% | |
| CAATCTCCAAGAAGAACAAT+TGG | - | chr5.2:66430284-66430303 | MS.gene064522:CDS | 35.0% | |
| CAATGTGAAACCTGCATAAT+AGG | + | chr5.2:66427866-66427885 | None:intergenic | 35.0% | |
| CAGAAATTTGGAAGCAGATA+TGG | - | chr5.2:66428594-66428613 | MS.gene064522:CDS | 35.0% | |
| CCATCAATCATCAAAATGCT+CGG | - | chr5.2:66429395-66429414 | MS.gene064522:intron | 35.0% | |
| CTTGTTCTTCCATCATTCTT+TGG | + | chr5.2:66429761-66429780 | None:intergenic | 35.0% | |
| GATCATTGTCCAAGTTCTTA+AGG | + | chr5.2:66430637-66430656 | None:intergenic | 35.0% | |
| GATGAGAGTTCATCAAGATA+TGG | - | chr5.2:66430218-66430237 | MS.gene064522:CDS | 35.0% | |
| GTTAGAAACGGTATCATCAT+TGG | + | chr5.2:66430048-66430067 | None:intergenic | 35.0% | |
| TAGTTTCCATCATACCAAGA+AGG | + | chr5.2:66427551-66427570 | None:intergenic | 35.0% | |
| TATCTCCTCCAAGTTAGAAA+CGG | + | chr5.2:66430060-66430079 | None:intergenic | 35.0% | |
| TATTAACCGTTCAACGTCAA+TGG | + | chr5.2:66427939-66427958 | None:intergenic | 35.0% | |
| TGAATTACGCCTTAAGAACT+TGG | - | chr5.2:66430625-66430644 | MS.gene064522:CDS | 35.0% | |
| TGATGATACCGTTTCTAACT+TGG | - | chr5.2:66430049-66430068 | MS.gene064522:CDS | 35.0% | |
| TGCAGAGAAAACAAACATGA+TGG | - | chr5.2:66428126-66428145 | MS.gene064522:CDS | 35.0% | |
| TGTATGGGATCCATACAAAA+TGG | - | chr5.2:66430539-66430558 | MS.gene064522:CDS | 35.0% | |
| TGTTTACCTTGTGCATTATC+TGG | + | chr5.2:66428268-66428287 | None:intergenic | 35.0% | |
| TGTTTCTCATGACTTAACCA+TGG | + | chr5.2:66427443-66427462 | None:intergenic | 35.0% | |
| TTATGCAAAGGAAAGATCGA+TGG | + | chr5.2:66428343-66428362 | None:intergenic | 35.0% | |
| TTTGGTATGAGACATAGGAT+TGG | - | chr5.2:66427410-66427429 | MS.gene064522:CDS | 35.0% | |
| ! | AGAAGGAATTGGAAGAGTAT+AGG | - | chr5.2:66429856-66429875 | MS.gene064522:CDS | 35.0% |
| ! | AGATCAACTCAAAGCATTAG+AGG | - | chr5.2:66430157-66430176 | MS.gene064522:CDS | 35.0% |
| ! | ATACAAAATGGTGGTGATGA+AGG | - | chr5.2:66430551-66430570 | MS.gene064522:CDS | 35.0% |
| ! | CTCTTTGAGAAAACAGAATC+AGG | - | chr5.2:66429501-66429520 | MS.gene064522:CDS | 35.0% |
| ! | GAAAGTGTGTATTGAAGAAG+AGG | - | chr5.2:66430457-66430476 | MS.gene064522:CDS | 35.0% |
| ! | GAAGGAATTGGAAGAGTATA+GGG | - | chr5.2:66429857-66429876 | MS.gene064522:CDS | 35.0% |
| ! | TGCAACTTAACTATAGTGGA+TGG | + | chr5.2:66430659-66430678 | None:intergenic | 35.0% |
| ! | TTCATCACCACCATTTTGTA+TGG | + | chr5.2:66430552-66430571 | None:intergenic | 35.0% |
| !!! | AAGTTTTATTCTCAGAGAGG+TGG | - | chr5.2:66427721-66427740 | MS.gene064522:CDS | 35.0% |
| AAGGCTTCAACAGATAAGGA+GGG | + | chr5.2:66427532-66427551 | None:intergenic | 40.0% | |
| ACAAAGCCATTGACGTTGAA+CGG | - | chr5.2:66427930-66427949 | MS.gene064522:CDS | 40.0% | |
| AGAGAAGCAAGAACTTGAGA+AGG | - | chr5.2:66429839-66429858 | MS.gene064522:CDS | 40.0% | |
| ATCTTCTTCAAGTGACAGTG+AGG | - | chr5.2:66429104-66429123 | MS.gene064522:intron | 40.0% | |
| ATGGGATCCATACAAAATGG+TGG | - | chr5.2:66430542-66430561 | MS.gene064522:CDS | 40.0% | |
| ATTGAATGAGGATCTAGAGG+AGG | - | chr5.2:66428009-66428028 | MS.gene064522:CDS | 40.0% | |
| CAAGAAGGCTTCAACAGATA+AGG | + | chr5.2:66427536-66427555 | None:intergenic | 40.0% | |
| CTTATCTGTTGAAGCCTTCT+TGG | - | chr5.2:66427534-66427553 | MS.gene064522:CDS | 40.0% | |
| GAAGAACCAGATAATGCACA+AGG | - | chr5.2:66428259-66428278 | MS.gene064522:CDS | 40.0% | |
| GAGTGCTTCACAATTGGATA+TGG | + | chr5.2:66429226-66429245 | None:intergenic | 40.0% | |
| GATGGAGCTTGAAGAAAGTT+TGG | - | chr5.2:66428144-66428163 | MS.gene064522:CDS | 40.0% | |
| GCAAGAACTTGAGAAGGAAT+TGG | - | chr5.2:66429845-66429864 | MS.gene064522:CDS | 40.0% | |
| GGATGCAGAAAAAGATGAGA+AGG | - | chr5.2:66427790-66427809 | MS.gene064522:CDS | 40.0% | |
| GTATGGATCCCATACAATGT+TGG | + | chr5.2:66430535-66430554 | None:intergenic | 40.0% | |
| GTGAAAATTGCTTGGCTTCT+AGG | - | chr5.2:66427360-66427379 | MS.gene064522:CDS | 40.0% | |
| TCTTGTTCTTGTTGCAACAC+CGG | - | chr5.2:66429963-66429982 | MS.gene064522:CDS | 40.0% | |
| TGATACCGTTTCTAACTTGG+AGG | - | chr5.2:66430052-66430071 | MS.gene064522:CDS | 40.0% | |
| TGATCATGATCAGGATGAAG+AGG | - | chr5.2:66427664-66427683 | MS.gene064522:CDS | 40.0% | |
| TGCACACAAGAAGATGAATC+TGG | - | chr5.2:66428475-66428494 | MS.gene064522:CDS | 40.0% | |
| TTCTGATGCTCCTATTATGC+AGG | - | chr5.2:66427853-66427872 | MS.gene064522:CDS | 40.0% | |
| TTGAAGCCTTCTTGGTATGA+TGG | - | chr5.2:66427542-66427561 | MS.gene064522:CDS | 40.0% | |
| TTGGTTAGTAGCTATTGCTG+AGG | + | chr5.2:66429673-66429692 | None:intergenic | 40.0% | |
| ! | AAATGGTGGTGATGAAGGAA+AGG | - | chr5.2:66430556-66430575 | MS.gene064522:CDS | 40.0% |
| ! | AGCTCTTTGTTCGGCTTTTA+GGG | + | chr5.2:66429610-66429629 | None:intergenic | 40.0% |
| ! | TGGATCAAGTGATGATGATG+AGG | - | chr5.2:66428495-66428514 | MS.gene064522:CDS | 40.0% |
| !! | ATCCGGTTTTAACAATCGAC+CGG | - | chr5.2:66429574-66429593 | MS.gene064522:CDS | 40.0% |
| !! | ATGCATTGACTTGAGTAGGT+TGG | + | chr5.2:66429072-66429091 | None:intergenic | 40.0% |
| !! | CCGAGCATTTTGATGATTGA+TGG | + | chr5.2:66429398-66429417 | None:intergenic | 40.0% |
| !! | CTTTTAGGGATGCTTTTAGC+CGG | + | chr5.2:66429596-66429615 | None:intergenic | 40.0% |
| !! | TCTTCTAAGACGCTTGATTG+CGG | + | chr5.2:66428079-66428098 | None:intergenic | 40.0% |
| !! | TGACATGCATTGACTTGAGT+AGG | + | chr5.2:66429076-66429095 | None:intergenic | 40.0% |
| !! | TGCATTATCTGGTTCTTCTG+TGG | + | chr5.2:66428257-66428276 | None:intergenic | 40.0% |
| AACTGAACTCGATCGATCCT+CGG | + | chr5.2:66427747-66427766 | None:intergenic | 45.0% | |
| ACGCTTGATTGCGGTTCAAT+CGG | + | chr5.2:66428070-66428089 | None:intergenic | 45.0% | |
| AGCCGGTCGATTGTTAAAAC+CGG | + | chr5.2:66429579-66429598 | None:intergenic | 45.0% | |
| ATGCAATGCACTACATGCAG+AGG | - | chr5.2:66429469-66429488 | MS.gene064522:CDS | 45.0% | |
| GAACAAGAAAATGCTCCACC+AGG | - | chr5.2:66428619-66428638 | MS.gene064522:CDS | 45.0% | |
| GAAGGCTTCAACAGATAAGG+AGG | + | chr5.2:66427533-66427552 | None:intergenic | 45.0% | |
| GCAATCAAGCGTCTTAGAAG+AGG | - | chr5.2:66428078-66428097 | MS.gene064522:CDS | 45.0% | |
| TACAAGGCTGCAGGAAGAAA+AGG | - | chr5.2:66429707-66429726 | MS.gene064522:intron | 45.0% | |
| TGAGGTAGAATACAGCGATC+CGG | - | chr5.2:66429557-66429576 | MS.gene064522:CDS | 45.0% | |
| ! | AGCACTGAGAGCTCTTTGTT+CGG | + | chr5.2:66429619-66429638 | None:intergenic | 45.0% |
| ! | AGGTTGATCGCGTTTATGAC+AGG | - | chr5.2:66430477-66430496 | MS.gene064522:CDS | 45.0% |
| ! | GAGCTCTTTGTTCGGCTTTT+AGG | + | chr5.2:66429611-66429630 | None:intergenic | 45.0% |
| !! | GAGTAGGTTGGTTCTTCAGA+TGG | + | chr5.2:66429060-66429079 | None:intergenic | 45.0% |
| !! | TAGGTTGGTTCTTCAGATGG+AGG | + | chr5.2:66429057-66429076 | None:intergenic | 45.0% |
| AAGGCTGCAGGAAGAAAAGG+CGG | - | chr5.2:66429710-66429729 | MS.gene064522:intron | 50.0% | |
| ACTTGCAACGCTACCATCCA+CGG | + | chr5.2:66429538-66429557 | None:intergenic | 50.0% | |
| AGAAAAGGCGGCAATGCAGA+TGG | - | chr5.2:66429722-66429741 | MS.gene064522:intron | 50.0% | |
| ATCAGGAGCAGAAGAATCCG+TGG | - | chr5.2:66429518-66429537 | MS.gene064522:CDS | 50.0% | |
| CCAGGTACAAAGACAGTGCA+TGG | - | chr5.2:66428637-66428656 | MS.gene064522:CDS | 50.0% | |
| CCATGCACTGTCTTTGTACC+TGG | + | chr5.2:66428640-66428659 | None:intergenic | 50.0% | |
| GGCAATGATTACAAGGCTGC+AGG | - | chr5.2:66429698-66429717 | MS.gene064522:intron | 50.0% | |
| TCTGCTGACCTAGGAGTTTC+AGG | + | chr5.2:66429450-66429469 | None:intergenic | 50.0% | |
| TGACAGTTCATCGGTGTAGC+CGG | + | chr5.2:66429985-66430004 | None:intergenic | 50.0% | |
| TGAGGATCTAGAGGAGGAGA+AGG | - | chr5.2:66428015-66428034 | MS.gene064522:CDS | 50.0% | |
| TGCACTGTCTTTGTACCTGG+TGG | + | chr5.2:66428637-66428656 | None:intergenic | 50.0% | |
| TGCATTGCATCTGCTGACCT+AGG | + | chr5.2:66429459-66429478 | None:intergenic | 50.0% | |
| CGGTTCAATCGGTGACTCAC+TGG | + | chr5.2:66428059-66428078 | None:intergenic | 55.0% | |
| GGAGCAGAAGAATCCGTGGA+TGG | - | chr5.2:66429522-66429541 | MS.gene064522:CDS | 55.0% | |
| TATTCTCAGAGAGGTGGCCG+AGG | - | chr5.2:66427727-66427746 | MS.gene064522:CDS | 55.0% | |
| ! | GGATGGTAGCGTTGCAAGTG+AGG | - | chr5.2:66429539-66429558 | MS.gene064522:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 66427356 | 66430700 | 66427356 | ID=MS.gene064522 |
| chr5.2 | mRNA | 66427356 | 66430700 | 66427356 | ID=MS.gene064522.t1;Parent=MS.gene064522 |
| chr5.2 | exon | 66429776 | 66430700 | 66429776 | ID=MS.gene064522.t1.exon1;Parent=MS.gene064522.t1 |
| chr5.2 | CDS | 66429776 | 66430700 | 66429776 | ID=cds.MS.gene064522.t1;Parent=MS.gene064522.t1 |
| chr5.2 | exon | 66429416 | 66429622 | 66429416 | ID=MS.gene064522.t1.exon2;Parent=MS.gene064522.t1 |
| chr5.2 | CDS | 66429416 | 66429622 | 66429416 | ID=cds.MS.gene064522.t1;Parent=MS.gene064522.t1 |
| chr5.2 | exon | 66428876 | 66429010 | 66428876 | ID=MS.gene064522.t1.exon3;Parent=MS.gene064522.t1 |
| chr5.2 | CDS | 66428876 | 66429010 | 66428876 | ID=cds.MS.gene064522.t1;Parent=MS.gene064522.t1 |
| chr5.2 | exon | 66427356 | 66428740 | 66427356 | ID=MS.gene064522.t1.exon4;Parent=MS.gene064522.t1 |
| chr5.2 | CDS | 66427356 | 66428740 | 66427356 | ID=cds.MS.gene064522.t1;Parent=MS.gene064522.t1 |
| Gene Sequence |
| Protein sequence |
