Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072954.t1 | XP_024635368.1 | 95.2 | 461 | 19 | 1 | 1 | 461 | 1 | 458 | 8.30E-240 | 839.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072954.t1 | Q39071 | 50.1 | 467 | 173 | 7 | 2 | 461 | 11 | 424 | 1.3e-103 | 378.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072954.t1 | G7JBQ1 | 95.2 | 461 | 19 | 1 | 1 | 461 | 1 | 458 | 6.0e-240 | 839.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene072954 | 0.804529 | 2.07E-49 | -1.69E-46 |
| MS.gene04985 | MS.gene072954 | 0.813141 | 2.97E-51 | -1.69E-46 |
| MS.gene049989 | MS.gene072954 | 0.893098 | 8.63E-75 | -1.69E-46 |
| MS.gene050297 | MS.gene072954 | 0.877749 | 4.90E-69 | -1.69E-46 |
| MS.gene051094 | MS.gene072954 | 0.841094 | 5.85E-58 | -1.69E-46 |
| MS.gene05124 | MS.gene072954 | 0.814371 | 1.59E-51 | -1.69E-46 |
| MS.gene051263 | MS.gene072954 | 0.823399 | 1.41E-53 | -1.69E-46 |
| MS.gene051629 | MS.gene072954 | 0.836787 | 7.63E-57 | -1.69E-46 |
| MS.gene051742 | MS.gene072954 | 0.828808 | 7.32E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene072954 | 0.810924 | 9.05E-51 | -1.69E-46 |
| MS.gene051955 | MS.gene072954 | 0.858332 | 8.86E-63 | -1.69E-46 |
| MS.gene052143 | MS.gene072954 | 0.854223 | 1.42E-61 | -1.69E-46 |
| MS.gene052308 | MS.gene072954 | 0.821719 | 3.48E-53 | -1.69E-46 |
| MS.gene052367 | MS.gene072954 | 0.885143 | 1.05E-71 | -1.69E-46 |
| MS.gene053173 | MS.gene072954 | 0.836943 | 6.96E-57 | -1.69E-46 |
| MS.gene053348 | MS.gene072954 | 0.850649 | 1.48E-60 | -1.69E-46 |
| MS.gene053416 | MS.gene072954 | 0.871217 | 8.09E-67 | -1.69E-46 |
| MS.gene053417 | MS.gene072954 | 0.869202 | 3.70E-66 | -1.69E-46 |
| MS.gene05369 | MS.gene072954 | 0.823023 | 1.73E-53 | -1.69E-46 |
| MS.gene053929 | MS.gene072954 | 0.811437 | 7.00E-51 | -1.69E-46 |
| MS.gene054551 | MS.gene072954 | 0.850808 | 1.34E-60 | -1.69E-46 |
| MS.gene054552 | MS.gene072954 | 0.806457 | 8.15E-50 | -1.69E-46 |
| MS.gene054593 | MS.gene072954 | 0.841947 | 3.49E-58 | -1.69E-46 |
| MS.gene054643 | MS.gene072954 | 0.835732 | 1.41E-56 | -1.69E-46 |
| MS.gene055308 | MS.gene072954 | 0.83361 | 4.83E-56 | -1.69E-46 |
| MS.gene055411 | MS.gene072954 | 0.82309 | 1.67E-53 | -1.69E-46 |
| MS.gene055578 | MS.gene072954 | 0.842608 | 2.33E-58 | -1.69E-46 |
| MS.gene055579 | MS.gene072954 | 0.830743 | 2.47E-55 | -1.69E-46 |
| MS.gene055781 | MS.gene072954 | 0.803309 | 3.71E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene072954 | 0.860077 | 2.66E-63 | -1.69E-46 |
| MS.gene056041 | MS.gene072954 | 0.914564 | 1.65E-84 | -1.69E-46 |
| MS.gene056042 | MS.gene072954 | 0.887636 | 1.20E-72 | -1.69E-46 |
| MS.gene05640 | MS.gene072954 | 0.827797 | 1.28E-54 | -1.69E-46 |
| MS.gene056526 | MS.gene072954 | 0.885217 | 9.84E-72 | -1.69E-46 |
| MS.gene056528 | MS.gene072954 | 0.834799 | 2.43E-56 | -1.69E-46 |
| MS.gene057358 | MS.gene072954 | 0.809345 | 1.98E-50 | -1.69E-46 |
| MS.gene057458 | MS.gene072954 | 0.829641 | 4.59E-55 | -1.69E-46 |
| MS.gene057483 | MS.gene072954 | 0.807406 | 5.13E-50 | -1.69E-46 |
| MS.gene058196 | MS.gene072954 | 0.866711 | 2.34E-65 | -1.69E-46 |
| MS.gene058197 | MS.gene072954 | 0.873125 | 1.87E-67 | -1.69E-46 |
| MS.gene058198 | MS.gene072954 | 0.867972 | 9.22E-66 | -1.69E-46 |
| MS.gene058818 | MS.gene072954 | 0.824691 | 7.04E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene072954 | 0.805511 | 1.29E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene072954 | 0.814148 | 1.79E-51 | -1.69E-46 |
| MS.gene059300 | MS.gene072954 | 0.880201 | 6.67E-70 | -1.69E-46 |
| MS.gene059553 | MS.gene072954 | 0.857436 | 1.63E-62 | -1.69E-46 |
| MS.gene060473 | MS.gene072954 | 0.890605 | 8.47E-74 | -1.69E-46 |
| MS.gene060492 | MS.gene072954 | 0.821197 | 4.59E-53 | -1.69E-46 |
| MS.gene060565 | MS.gene072954 | 0.897535 | 1.28E-76 | -1.69E-46 |
| MS.gene06057 | MS.gene072954 | 0.892828 | 1.11E-74 | -1.69E-46 |
| MS.gene06093 | MS.gene072954 | 0.84236 | 2.71E-58 | -1.69E-46 |
| MS.gene061099 | MS.gene072954 | 0.885117 | 1.07E-71 | -1.69E-46 |
| MS.gene061260 | MS.gene072954 | 0.853694 | 2.02E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072954 | MS.gene044085 | PPI |
| MS.gene072954 | MS.gene00478 | PPI |
| MS.gene072954 | MS.gene62819 | PPI |
| MS.gene072954 | MS.gene033401 | PPI |
| MS.gene89090 | MS.gene072954 | PPI |
| MS.gene28739 | MS.gene072954 | PPI |
| MS.gene00474 | MS.gene072954 | PPI |
| MS.gene072954 | MS.gene09785 | PPI |
| MS.gene36424 | MS.gene072954 | PPI |
| MS.gene072954 | MS.gene68361 | PPI |
| MS.gene65301 | MS.gene072954 | PPI |
| MS.gene072954 | MS.gene00063 | PPI |
| MS.gene072954 | MS.gene007485 | PPI |
| MS.gene072954 | MS.gene71260 | PPI |
| MS.gene072954 | MS.gene64859 | PPI |
| MS.gene007487 | MS.gene072954 | PPI |
| MS.gene018518 | MS.gene072954 | PPI |
| MS.gene36271 | MS.gene072954 | PPI |
| MS.gene072954 | MS.gene37226 | PPI |
| MS.gene67884 | MS.gene072954 | PPI |
| MS.gene36273 | MS.gene072954 | PPI |
| MS.gene065314 | MS.gene072954 | PPI |
| MS.gene072954 | MS.gene24450 | PPI |
| MS.gene35086 | MS.gene072954 | PPI |
| MS.gene67555 | MS.gene072954 | PPI |
| MS.gene22482 | MS.gene072954 | PPI |
| MS.gene061932 | MS.gene072954 | PPI |
| MS.gene007486 | MS.gene072954 | PPI |
| MS.gene072954 | MS.gene028366 | PPI |
| MS.gene011448 | MS.gene072954 | PPI |
| MS.gene55900 | MS.gene072954 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072954.t1 | MTR_3g107970 | 95.228 | 461 | 19 | 1 | 1 | 461 | 1 | 458 | 0.0 | 905 |
| MS.gene072954.t1 | MTR_1g011470 | 57.494 | 447 | 134 | 7 | 17 | 461 | 14 | 406 | 3.41e-173 | 493 |
| MS.gene072954.t1 | MTR_2g102520 | 48.401 | 469 | 210 | 12 | 11 | 461 | 8 | 462 | 1.64e-126 | 376 |
| MS.gene072954.t1 | MTR_2g102550 | 43.469 | 467 | 200 | 7 | 3 | 461 | 2 | 412 | 1.49e-119 | 356 |
| MS.gene072954.t1 | MTR_3g088415 | 55.939 | 261 | 115 | 0 | 201 | 461 | 225 | 485 | 5.54e-102 | 314 |
| MS.gene072954.t1 | MTR_3g088405 | 53.788 | 264 | 120 | 1 | 200 | 461 | 227 | 490 | 2.32e-101 | 312 |
| MS.gene072954.t1 | MTR_3g088415 | 58.986 | 217 | 89 | 0 | 200 | 416 | 224 | 440 | 1.03e-90 | 283 |
| MS.gene072954.t1 | MTR_1g018680 | 51.737 | 259 | 123 | 1 | 205 | 461 | 80 | 338 | 6.52e-89 | 275 |
| MS.gene072954.t1 | MTR_3g102530 | 48.134 | 268 | 137 | 1 | 196 | 461 | 64 | 331 | 1.74e-82 | 258 |
| MS.gene072954.t1 | MTR_3g102510 | 46.245 | 253 | 136 | 0 | 209 | 461 | 67 | 319 | 8.54e-78 | 246 |
| MS.gene072954.t1 | MTR_3g102520 | 46.743 | 261 | 137 | 1 | 203 | 461 | 78 | 338 | 2.49e-77 | 246 |
| MS.gene072954.t1 | MTR_3g102560 | 51.055 | 237 | 109 | 2 | 221 | 455 | 69 | 300 | 8.05e-73 | 233 |
| MS.gene072954.t1 | MTR_3g088415 | 62.805 | 164 | 61 | 0 | 200 | 363 | 224 | 387 | 1.51e-71 | 232 |
| MS.gene072954.t1 | MTR_3g102540 | 51.429 | 245 | 108 | 6 | 220 | 460 | 13 | 250 | 9.23e-69 | 221 |
| MS.gene072954.t1 | MTR_5g088980 | 41.473 | 258 | 142 | 6 | 202 | 457 | 150 | 400 | 1.45e-56 | 193 |
| MS.gene072954.t1 | MTR_5g023790 | 43.966 | 232 | 122 | 4 | 201 | 431 | 156 | 380 | 2.95e-55 | 189 |
| MS.gene072954.t1 | MTR_5g023790 | 40.840 | 262 | 147 | 4 | 201 | 461 | 156 | 410 | 4.86e-55 | 189 |
| MS.gene072954.t1 | MTR_7g089080 | 40.996 | 261 | 145 | 7 | 201 | 457 | 183 | 438 | 9.33e-53 | 191 |
| MS.gene072954.t1 | MTR_8g074000 | 39.431 | 246 | 142 | 3 | 216 | 461 | 176 | 414 | 3.21e-52 | 182 |
| MS.gene072954.t1 | MTR_5g023790 | 44.643 | 168 | 91 | 2 | 201 | 367 | 156 | 322 | 1.31e-39 | 146 |
| MS.gene072954.t1 | MTR_3g060770 | 30.556 | 252 | 160 | 7 | 185 | 431 | 2 | 243 | 1.37e-25 | 106 |
| MS.gene072954.t1 | MTR_3g061680 | 30.638 | 235 | 149 | 6 | 202 | 431 | 8 | 233 | 7.32e-25 | 103 |
| MS.gene072954.t1 | MTR_3g060410 | 34.375 | 192 | 117 | 5 | 245 | 431 | 131 | 318 | 9.30e-25 | 105 |
| MS.gene072954.t1 | MTR_3g060400 | 31.250 | 224 | 140 | 6 | 213 | 431 | 25 | 239 | 1.02e-24 | 103 |
| MS.gene072954.t1 | MTR_3g460990 | 31.250 | 224 | 140 | 6 | 213 | 431 | 25 | 239 | 1.02e-24 | 103 |
| MS.gene072954.t1 | MTR_3g060820 | 30.204 | 245 | 151 | 7 | 192 | 431 | 4 | 233 | 7.08e-24 | 101 |
| MS.gene072954.t1 | MTR_1g032850 | 35.359 | 181 | 103 | 5 | 234 | 411 | 362 | 531 | 1.11e-18 | 89.0 |
| MS.gene072954.t1 | MTR_5g044040 | 40.260 | 77 | 46 | 0 | 271 | 347 | 7 | 83 | 8.98e-17 | 77.0 |
| MS.gene072954.t1 | MTR_5g011900 | 29.730 | 148 | 101 | 2 | 242 | 388 | 95 | 240 | 2.73e-15 | 75.9 |
| MS.gene072954.t1 | MTR_3g100710 | 28.571 | 182 | 117 | 4 | 228 | 400 | 74 | 251 | 2.61e-14 | 74.7 |
| MS.gene072954.t1 | MTR_6g045270 | 28.958 | 259 | 151 | 11 | 208 | 455 | 38 | 274 | 7.23e-13 | 69.7 |
| MS.gene072954.t1 | MTR_4g080990 | 26.816 | 179 | 124 | 4 | 228 | 400 | 69 | 246 | 1.43e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072954.t1 | AT5G25380 | 51.304 | 460 | 162 | 9 | 10 | 461 | 19 | 424 | 1.77e-142 | 415 |
| MS.gene072954.t1 | AT5G25380 | 50.327 | 459 | 162 | 7 | 10 | 461 | 19 | 418 | 5.71e-141 | 410 |
| MS.gene072954.t1 | AT5G25380 | 50.327 | 459 | 162 | 7 | 10 | 461 | 19 | 418 | 1.15e-140 | 410 |
| MS.gene072954.t1 | AT5G25380 | 50.327 | 459 | 162 | 7 | 10 | 461 | 19 | 418 | 1.15e-140 | 410 |
| MS.gene072954.t1 | AT5G11300 | 50.773 | 453 | 162 | 9 | 13 | 461 | 22 | 417 | 1.61e-140 | 410 |
| MS.gene072954.t1 | AT1G80370 | 47.018 | 436 | 191 | 6 | 31 | 461 | 42 | 442 | 1.31e-126 | 375 |
| MS.gene072954.t1 | AT1G15570 | 48.522 | 406 | 179 | 6 | 62 | 461 | 52 | 433 | 2.57e-122 | 364 |
| MS.gene072954.t1 | AT5G11300 | 49.392 | 411 | 147 | 9 | 13 | 419 | 22 | 375 | 4.07e-119 | 355 |
| MS.gene072954.t1 | AT1G44110 | 55.263 | 266 | 119 | 0 | 196 | 461 | 174 | 439 | 4.26e-108 | 328 |
| MS.gene072954.t1 | AT5G43080 | 53.077 | 260 | 122 | 0 | 202 | 461 | 73 | 332 | 1.51e-97 | 297 |
| MS.gene072954.t1 | AT5G43080 | 53.462 | 260 | 116 | 1 | 202 | 461 | 73 | 327 | 1.92e-96 | 294 |
| MS.gene072954.t1 | AT1G47210 | 49.825 | 285 | 139 | 2 | 179 | 461 | 67 | 349 | 7.14e-96 | 294 |
| MS.gene072954.t1 | AT1G77390 | 53.435 | 262 | 122 | 0 | 200 | 461 | 162 | 423 | 3.55e-95 | 294 |
| MS.gene072954.t1 | AT1G47220 | 52.672 | 262 | 122 | 1 | 202 | 461 | 42 | 303 | 1.73e-90 | 278 |
| MS.gene072954.t1 | AT1G47230 | 49.810 | 263 | 130 | 1 | 201 | 461 | 80 | 342 | 1.45e-88 | 275 |
| MS.gene072954.t1 | AT1G47230 | 49.621 | 264 | 130 | 2 | 201 | 461 | 80 | 343 | 8.98e-87 | 270 |
| MS.gene072954.t1 | AT5G06150 | 40.602 | 266 | 149 | 5 | 193 | 457 | 158 | 415 | 8.19e-56 | 192 |
| MS.gene072954.t1 | AT1G20610 | 42.672 | 232 | 125 | 4 | 201 | 431 | 161 | 385 | 9.72e-54 | 186 |
| MS.gene072954.t1 | AT1G76310 | 43.404 | 235 | 124 | 5 | 199 | 431 | 159 | 386 | 2.00e-52 | 181 |
| MS.gene072954.t1 | AT3G11520 | 44.351 | 239 | 124 | 5 | 201 | 438 | 143 | 373 | 2.18e-52 | 181 |
| MS.gene072954.t1 | AT1G76310 | 40.377 | 265 | 149 | 5 | 199 | 461 | 159 | 416 | 2.25e-52 | 182 |
| MS.gene072954.t1 | AT2G26760 | 40.769 | 260 | 143 | 7 | 201 | 457 | 114 | 365 | 2.88e-52 | 181 |
| MS.gene072954.t1 | AT3G11520 | 44.397 | 232 | 120 | 5 | 201 | 431 | 143 | 366 | 6.54e-52 | 181 |
| MS.gene072954.t1 | AT1G16330 | 39.669 | 242 | 139 | 3 | 216 | 457 | 395 | 629 | 1.15e-48 | 177 |
| MS.gene072954.t1 | AT4G37490 | 37.736 | 265 | 150 | 8 | 200 | 457 | 148 | 404 | 9.25e-48 | 170 |
| MS.gene072954.t1 | AT1G76310 | 36.519 | 293 | 149 | 6 | 199 | 461 | 159 | 444 | 2.02e-46 | 167 |
| MS.gene072954.t1 | AT4G35620 | 42.672 | 232 | 125 | 4 | 201 | 431 | 156 | 380 | 4.64e-46 | 164 |
| MS.gene072954.t1 | AT2G17620 | 40.458 | 262 | 148 | 4 | 201 | 461 | 155 | 409 | 7.80e-46 | 165 |
| MS.gene072954.t1 | AT4G35620 | 39.695 | 262 | 150 | 4 | 201 | 461 | 156 | 410 | 8.22e-46 | 165 |
| MS.gene072954.t1 | AT5G06150 | 42.045 | 176 | 99 | 3 | 193 | 367 | 158 | 331 | 4.85e-39 | 144 |
| MS.gene072954.t1 | AT1G76310 | 45.029 | 171 | 91 | 3 | 199 | 367 | 159 | 328 | 7.97e-39 | 144 |
| MS.gene072954.t1 | AT1G20590 | 43.312 | 157 | 83 | 2 | 275 | 431 | 63 | 213 | 3.23e-34 | 129 |
| MS.gene072954.t1 | AT1G47210 | 49.219 | 128 | 61 | 2 | 179 | 304 | 67 | 192 | 2.31e-32 | 122 |
| MS.gene072954.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 234 | 387 | 5.86e-22 | 98.6 |
| MS.gene072954.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.39e-22 | 98.6 |
| MS.gene072954.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.39e-22 | 98.6 |
| MS.gene072954.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.39e-22 | 98.6 |
| MS.gene072954.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.39e-22 | 98.6 |
| MS.gene072954.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 245 | 398 | 6.47e-22 | 98.6 |
| MS.gene072954.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 245 | 398 | 6.47e-22 | 98.6 |
| MS.gene072954.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.95e-22 | 98.6 |
| MS.gene072954.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 7.61e-22 | 98.6 |
| MS.gene072954.t1 | AT1G14750 | 34.969 | 163 | 96 | 4 | 247 | 405 | 384 | 540 | 5.12e-16 | 80.9 |
| MS.gene072954.t1 | AT1G14750 | 34.969 | 163 | 96 | 4 | 247 | 405 | 384 | 540 | 6.94e-16 | 80.5 |
| MS.gene072954.t1 | AT1G14750 | 34.969 | 163 | 96 | 4 | 247 | 405 | 216 | 372 | 6.95e-16 | 79.7 |
| MS.gene072954.t1 | AT1G14750 | 34.969 | 163 | 95 | 5 | 247 | 405 | 216 | 371 | 1.02e-14 | 76.3 |
| MS.gene072954.t1 | AT5G65420 | 25.957 | 235 | 157 | 8 | 182 | 403 | 5 | 235 | 8.99e-11 | 63.2 |
Find 87 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTAAAGGATTCTCAAATT+TGG | 0.182649 | 3.1:+85656964 | MS.gene072954:CDS |
| CAGATCAAGGGCAAAGGTTT+TGG | 0.191093 | 3.1:+85655447 | MS.gene072954:CDS |
| TGGGATTTATACCTGAAAAT+TGG | 0.195568 | 3.1:-85655644 | None:intergenic |
| CGAACTTTGTTGTATATATC+AGG | 0.212202 | 3.1:-85656999 | None:intergenic |
| CTGCAACTTCTCCATGTAAT+TGG | 0.276568 | 3.1:-85657377 | None:intergenic |
| TACATACCTGAGAAATGTTT+TGG | 0.301501 | 3.1:-85658357 | None:intergenic |
| GAGTGGACGCTCTTCATCTT+TGG | 0.302032 | 3.1:-85655416 | None:intergenic |
| TATTGAAATAAACCTTTGTT+TGG | 0.308273 | 3.1:-85656675 | None:intergenic |
| TCTTGCTGAACTGGAATTCC+TGG | 0.315133 | 3.1:+85658841 | MS.gene072954:CDS |
| ACAGGTTCCTCTTGCTGAAC+TGG | 0.342894 | 3.1:+85658832 | MS.gene072954:intron |
| TTCTCCATGTAATTGGTTGA+TGG | 0.359361 | 3.1:-85657370 | None:intergenic |
| CACCATTGCTGCAGTAACTT+TGG | 0.388234 | 3.1:+85656536 | MS.gene072954:CDS |
| TGCAAGTAACACCAAGCAAC+TGG | 0.415916 | 3.1:-85657829 | None:intergenic |
| CAAAACCTTTGCCCTTGATC+TGG | 0.423251 | 3.1:-85655446 | None:intergenic |
| AATAAACCTTTGTTTGGACT+TGG | 0.425078 | 3.1:-85656669 | None:intergenic |
| TCTTCCAGTGCAAGAACAAC+TGG | 0.426769 | 3.1:-85659120 | None:intergenic |
| ACAGTAAGGTAAAGAGTGTC+TGG | 0.432601 | 3.1:-85657755 | None:intergenic |
| AAGAGCAACAGCTTCCAAAA+AGG | 0.433513 | 3.1:+85655498 | MS.gene072954:CDS |
| TGAGTGGTTGAGGGTCCATC+TGG | 0.438657 | 3.1:-85658951 | None:intergenic |
| TGCGTGGAATTCTGATTGAT+TGG | 0.439226 | 3.1:+85657419 | MS.gene072954:CDS |
| ATATATGCAGACTACAACTC+TGG | 0.439974 | 3.1:+85659062 | MS.gene072954:intron |
| TAGCTCTGAAGCTTTGTAGT+TGG | 0.450188 | 3.1:-85659094 | None:intergenic |
| AACATGGTCACTTATGTTGT+TGG | 0.450701 | 3.1:-85656586 | None:intergenic |
| TATCGATGTCTACAAAGGTC+AGG | 0.459319 | 3.1:-85656938 | None:intergenic |
| ATGGATGTTCTGAGTGGTTG+AGG | 0.460808 | 3.1:-85658961 | None:intergenic |
| CTGCTGTATTCCTTGCCAGA+TGG | 0.472091 | 3.1:+85658936 | MS.gene072954:CDS |
| CCACAACCAAAACATTTCTC+AGG | 0.475913 | 3.1:+85658351 | MS.gene072954:CDS |
| ATCAGAATTCCACGCATGCT+TGG | 0.476428 | 3.1:-85657412 | None:intergenic |
| CACTCAGAATTACCAGATCA+AGG | 0.485115 | 3.1:+85655434 | MS.gene072954:CDS |
| TTGTGCTGATGAAACTTCAA+TGG | 0.487200 | 3.1:-85656451 | None:intergenic |
| GATCAATGAGGTTCACAGTA+AGG | 0.489451 | 3.1:-85657769 | None:intergenic |
| TGTAAGAAGATTGTGCTGCT+TGG | 0.497059 | 3.1:-85658473 | None:intergenic |
| ATGTTCCTCACCGTAAAAGA+AGG | 0.498778 | 3.1:+85655560 | MS.gene072954:CDS |
| AAAACCAGTTGTTCTTGCAC+TGG | 0.503437 | 3.1:+85659116 | MS.gene072954:CDS |
| CCTCACCGTAAAAGAAGGGC+AGG | 0.504738 | 3.1:+85655565 | MS.gene072954:CDS |
| GGTTTCTGAGGAATATAAGC+TGG | 0.509301 | 3.1:+85657730 | MS.gene072954:intron |
| GAACTTTGTTGTATATATCA+GGG | 0.514973 | 3.1:-85656998 | None:intergenic |
| AATTCTGATTGATTGGCTTG+TGG | 0.519075 | 3.1:+85657426 | MS.gene072954:CDS |
| CATAAATATGATTTGTGAGA+AGG | 0.520200 | 3.1:+85656899 | MS.gene072954:CDS |
| TGAAGTTTCATCAGCACAAG+AGG | 0.526624 | 3.1:+85656455 | MS.gene072954:CDS |
| AGCATGGAGAGAACAACCTT+TGG | 0.528068 | 3.1:-85659157 | None:intergenic |
| TTACTGTGAACCTCATTGAT+CGG | 0.529430 | 3.1:+85657771 | MS.gene072954:CDS |
| TATATTTCTCACGTATAGCA+TGG | 0.531941 | 3.1:-85659173 | None:intergenic |
| TGGATGTTCTGAGTGGTTGA+GGG | 0.532302 | 3.1:-85658960 | None:intergenic |
| TCAACCACTCAGAACATCCA+TGG | 0.534173 | 3.1:+85658963 | MS.gene072954:CDS |
| AAACACAGGCTCCAGTTGCT+TGG | 0.536048 | 3.1:+85657818 | MS.gene072954:CDS |
| AGAATTGTCTACCATAAAGA+TGG | 0.537932 | 3.1:+85656500 | MS.gene072954:CDS |
| GCAGAAGCAGCCACACGAGA+AGG | 0.540170 | 3.1:-85658917 | None:intergenic |
| TTGGACATACAATGTTCAGT+TGG | 0.549012 | 3.1:-85656567 | None:intergenic |
| GGACCCTCTTCGGAAAATGA+AGG | 0.550131 | 3.1:+85655472 | MS.gene072954:CDS |
| ACCTTTGTTTGGACTTGGAG+AGG | 0.555698 | 3.1:-85656664 | None:intergenic |
| AACCAAAGTTACTGCAGCAA+TGG | 0.556672 | 3.1:-85656538 | None:intergenic |
| AAGACCATCAACCAATTACA+TGG | 0.561852 | 3.1:+85657366 | MS.gene072954:CDS |
| TTGTGAGAAGGTAGGAGCCT+CGG | 0.564379 | 3.1:+85656911 | MS.gene072954:CDS |
| CAAGTTTGATTCAGAAACAC+AGG | 0.567317 | 3.1:+85657804 | MS.gene072954:CDS |
| ACAAGAGGATGTTAAAGAGA+AGG | 0.567620 | 3.1:+85656470 | MS.gene072954:CDS |
| AGCAGCACAATCTTCTTACA+AGG | 0.568751 | 3.1:+85658476 | MS.gene072954:CDS |
| GCTCTGCTAAATAATTTGCC+AGG | 0.570353 | 3.1:-85658859 | None:intergenic |
| AACTTTGTTGTATATATCAG+GGG | 0.581055 | 3.1:-85656997 | None:intergenic |
| TGTTTAACACGTTTATCATG+TGG | 0.581458 | 3.1:-85655619 | None:intergenic |
| TGAGAAATATAAACATGAGA+AGG | 0.585853 | 3.1:+85659185 | MS.gene072954:CDS |
| GACCCTCTTCGGAAAATGAA+GGG | 0.596652 | 3.1:+85655473 | MS.gene072954:CDS |
| GATCTGCAACTTAATACCAA+AGG | 0.597942 | 3.1:+85659141 | MS.gene072954:CDS |
| ACAGTTTCTACCTTCTCGTG+TGG | 0.603003 | 3.1:+85658907 | MS.gene072954:CDS |
| TCTGATTGATTGGCTTGTGG+AGG | 0.610856 | 3.1:+85657429 | MS.gene072954:CDS |
| TACAAAGGTCAGGCGATCCG+AGG | 0.611523 | 3.1:-85656928 | None:intergenic |
| TAATACATACACAAAAGAAG+AGG | 0.613454 | 3.1:+85658274 | MS.gene072954:CDS |
| GGTTGAGGGTCCATCTGGCA+AGG | 0.616376 | 3.1:-85658946 | None:intergenic |
| AATTACCAGATCAAGGGCAA+AGG | 0.620424 | 3.1:+85655441 | MS.gene072954:CDS |
| TTGAGAGAAACCGATCAATG+AGG | 0.621952 | 3.1:-85657781 | None:intergenic |
| AGGAATTCCAGTTCAGCAAG+AGG | 0.623808 | 3.1:-85658839 | None:intergenic |
| CAGATAACTGAAAACGCAGA+AGG | 0.624641 | 3.1:-85658325 | None:intergenic |
| ACTCAGAATTACCAGATCAA+GGG | 0.628344 | 3.1:+85655435 | MS.gene072954:CDS |
| ATGCAAGAATGTGTGAACTC+TGG | 0.628364 | 3.1:+85656630 | MS.gene072954:CDS |
| AAGCAAAATTCTTCCACTCG+AGG | 0.634099 | 3.1:-85658242 | None:intergenic |
| CAACCACTCAGAACATCCAT+GGG | 0.636239 | 3.1:+85658964 | MS.gene072954:CDS |
| ACATTCTTGCATTGAAAGTG+TGG | 0.640397 | 3.1:-85656619 | None:intergenic |
| TGTTCCTCACCGTAAAAGAA+GGG | 0.641902 | 3.1:+85655561 | MS.gene072954:CDS |
| AATATGATTTGTGAGAAGGT+AGG | 0.642690 | 3.1:+85656903 | MS.gene072954:CDS |
| GATATTTCTCCAAGCATGCG+TGG | 0.654313 | 3.1:+85657403 | MS.gene072954:CDS |
| CTTGATCTGGTAATTCTGAG+TGG | 0.660376 | 3.1:-85655433 | None:intergenic |
| ACCTCTCCAAGTCCAAACAA+AGG | 0.667488 | 3.1:+85656663 | MS.gene072954:CDS |
| ATACCCATGGATGTTCTGAG+TGG | 0.668616 | 3.1:-85658967 | None:intergenic |
| AGAGATGTGTGCTCCTCGAG+TGG | 0.670751 | 3.1:+85658229 | MS.gene072954:CDS |
| GTGTGGTGTCTGTCATAACA+TGG | 0.706964 | 3.1:-85656602 | None:intergenic |
| CTCACCGTAAAAGAAGGGCA+GGG | 0.713304 | 3.1:+85655566 | MS.gene072954:CDS |
| CAACAAAGTTCGAGTCACCG+AGG | 0.719869 | 3.1:+85657010 | MS.gene072954:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATAAAAAAAGTTACT+AGG | + | chr3.1:85656786-85656805 | MS.gene072954:intron | 10.0% |
| !!! | TAATGAAAATTTTATGTTTT+GGG | - | chr3.1:85656076-85656095 | None:intergenic | 10.0% |
| !!! | TATAATTTAAAACATGAATT+TGG | - | chr3.1:85655679-85655698 | None:intergenic | 10.0% |
| !! | GATTGTTTAATAATGAATTA+CGG | - | chr3.1:85657041-85657060 | None:intergenic | 15.0% |
| !! | TATTTATATCTTCTAAACAA+AGG | - | chr3.1:85659017-85659036 | None:intergenic | 15.0% |
| !!! | AATTGGTACATTTTATTTTA+TGG | - | chr3.1:85655970-85655989 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTATATTATCCAA+AGG | - | chr3.1:85656782-85656801 | None:intergenic | 15.0% |
| !!! | CTTTTTTTATATTATCCAAA+GGG | - | chr3.1:85656781-85656800 | None:intergenic | 15.0% |
| !!! | GTAATGAAAATTTTATGTTT+TGG | - | chr3.1:85656077-85656096 | None:intergenic | 15.0% |
| !! | ATCAATATCACCATATAATT+AGG | + | chr3.1:85655698-85655717 | MS.gene072954:intron | 20.0% |
| !! | TATGATAGAATAGAACATTA+TGG | + | chr3.1:85655781-85655800 | MS.gene072954:intron | 20.0% |
| !! | TATTGAAATAAACCTTTGTT+TGG | - | chr3.1:85656678-85656697 | None:intergenic | 20.0% |
| !! | TCTATTCTTAGTACAAAAAT+AGG | - | chr3.1:85657278-85657297 | None:intergenic | 20.0% |
| !!! | AAAACATTGATGATAAGTTT+TGG | + | chr3.1:85657321-85657340 | MS.gene072954:intron | 20.0% |
| !!! | AAATCTTTCTGATAGTTTTT+AGG | - | chr3.1:85655731-85655750 | None:intergenic | 20.0% |
| !!! | AAGATTTGAAATTAATGAGT+TGG | + | chr3.1:85655744-85655763 | MS.gene072954:intron | 20.0% |
| !!! | AATTTAACTTAGTATGTGTT+TGG | + | chr3.1:85658525-85658544 | MS.gene072954:intron | 20.0% |
| !!! | ACTAGTATAAAACATGTTTT+AGG | + | chr3.1:85656715-85656734 | MS.gene072954:intron | 20.0% |
| !!! | GTAAGTACTATTTTTTGTAA+TGG | + | chr3.1:85657865-85657884 | MS.gene072954:intron | 20.0% |
| !!! | TAAACTTTATCTTGTTATAC+AGG | + | chr3.1:85658814-85658833 | MS.gene072954:intron | 20.0% |
| ! | AAAAGAAGAGGTAGTAAAAA+TGG | + | chr3.1:85658286-85658305 | MS.gene072954:CDS | 25.0% |
| ! | AAATTGTAGAATCTCATCTT+AGG | + | chr3.1:85656154-85656173 | MS.gene072954:intron | 25.0% |
| ! | ACTATCATTTCCTAATGATA+TGG | - | chr3.1:85655867-85655886 | None:intergenic | 25.0% |
| ! | ACTTCAACAAACTGTAATTA+AGG | - | chr3.1:85657658-85657677 | None:intergenic | 25.0% |
| ! | AGAATTCTTTGATAAGGTTA+TGG | - | chr3.1:85657522-85657541 | None:intergenic | 25.0% |
| ! | AGACATCGATAAAAAGTTAA+AGG | + | chr3.1:85656950-85656969 | MS.gene072954:CDS | 25.0% |
| ! | AGTTAAAGGATTCTCAAATT+TGG | + | chr3.1:85656964-85656983 | MS.gene072954:CDS | 25.0% |
| ! | ATAGGATATATACAATGTGA+TGG | + | chr3.1:85657578-85657597 | MS.gene072954:intron | 25.0% |
| ! | CAAAAACATAGTTGAATGAT+AGG | + | chr3.1:85657560-85657579 | MS.gene072954:intron | 25.0% |
| ! | CTAAGTTAAATTGTAGATAG+TGG | - | chr3.1:85658517-85658536 | None:intergenic | 25.0% |
| ! | CTGTAAAATGGATAACTAAT+CGG | - | chr3.1:85656382-85656401 | None:intergenic | 25.0% |
| ! | GTACAAAAATAGGATTACTT+TGG | - | chr3.1:85657268-85657287 | None:intergenic | 25.0% |
| ! | TAAAATGTACCAATTGAACT+TGG | + | chr3.1:85655975-85655994 | MS.gene072954:intron | 25.0% |
| ! | TAATACATACACAAAAGAAG+AGG | + | chr3.1:85658274-85658293 | MS.gene072954:CDS | 25.0% |
| ! | TAGATGAGAATTCTTTGATA+AGG | - | chr3.1:85657528-85657547 | None:intergenic | 25.0% |
| ! | TTGATCTATTATTGTCTTTC+AGG | + | chr3.1:85658442-85658461 | MS.gene072954:intron | 25.0% |
| !! | AACTTTGTTGTATATATCAG+GGG | - | chr3.1:85657000-85657019 | None:intergenic | 25.0% |
| !! | ATGAATTTGGTGACAAAATT+GGG | - | chr3.1:85655666-85655685 | None:intergenic | 25.0% |
| !! | CATAAATATGATTTGTGAGA+AGG | + | chr3.1:85656899-85656918 | MS.gene072954:CDS | 25.0% |
| !! | GAACTTTGTTGTATATATCA+GGG | - | chr3.1:85657001-85657020 | None:intergenic | 25.0% |
| !! | TAAAGAGAAAAGTAGCATTT+TGG | - | chr3.1:85658052-85658071 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGACTAAAATA+TGG | + | chr3.1:85655756-85655775 | MS.gene072954:intron | 25.0% |
| !! | TCTTTTTGAACTATGAACTA+AGG | + | chr3.1:85657943-85657962 | MS.gene072954:intron | 25.0% |
| !! | TGTTAAACAATCCAATTTTC+AGG | + | chr3.1:85655633-85655652 | MS.gene072954:CDS | 25.0% |
| !!! | CAACTATGTTTTTGATTGAA+AGG | - | chr3.1:85657554-85657573 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCCCAATATCATT+CGG | + | chr3.1:85658163-85658182 | MS.gene072954:intron | 25.0% |
| !!! | TTAGCTTTGTGTTTTTCTTT+TGG | - | chr3.1:85656419-85656438 | None:intergenic | 25.0% |
| AAGAATAGAGCAGAATCATT+AGG | + | chr3.1:85657289-85657308 | MS.gene072954:intron | 30.0% | |
| AAGATTGTCCAATAGTTAAG+AGG | + | chr3.1:85656231-85656250 | MS.gene072954:intron | 30.0% | |
| AATAGATTTGCCTTCAAAGT+TGG | + | chr3.1:85656012-85656031 | MS.gene072954:intron | 30.0% | |
| ACTATGAACTAAGGATATCT+AGG | + | chr3.1:85657952-85657971 | MS.gene072954:intron | 30.0% | |
| AGAATTGTCTACCATAAAGA+TGG | + | chr3.1:85656500-85656519 | MS.gene072954:CDS | 30.0% | |
| AGACAACATGACAGTAATTA+TGG | - | chr3.1:85656862-85656881 | None:intergenic | 30.0% | |
| AGGTCTTCTTCCTAATTATA+TGG | - | chr3.1:85655711-85655730 | None:intergenic | 30.0% | |
| ATAGATTTGCCTTCAAAGTT+GGG | + | chr3.1:85656013-85656032 | MS.gene072954:intron | 30.0% | |
| ATCTTAGACCGAATGATATT+GGG | - | chr3.1:85658174-85658193 | None:intergenic | 30.0% | |
| GATTGATCTATCTAGGTAAT+TGG | + | chr3.1:85655917-85655936 | MS.gene072954:intron | 30.0% | |
| GGTGAAATATCTTAGAAGTT+TGG | + | chr3.1:85656833-85656852 | MS.gene072954:intron | 30.0% | |
| GGTTATAGTTGCATTTGAAA+TGG | + | chr3.1:85657627-85657646 | MS.gene072954:intron | 30.0% | |
| GTTGTTATCACCATATCATT+AGG | + | chr3.1:85655854-85655873 | MS.gene072954:intron | 30.0% | |
| TAACTATCACCAAATGCATT+CGG | - | chr3.1:85658110-85658129 | None:intergenic | 30.0% | |
| TACAACTCTTTATGATGATC+AGG | + | chr3.1:85657606-85657625 | MS.gene072954:intron | 30.0% | |
| TATATTTCTCACGTATAGCA+TGG | - | chr3.1:85659176-85659195 | None:intergenic | 30.0% | |
| TCAATGTAAGCAAGTATTCT+AGG | + | chr3.1:85657168-85657187 | MS.gene072954:intron | 30.0% | |
| TCATTTAATCCGAATGCATT+TGG | + | chr3.1:85658098-85658117 | MS.gene072954:intron | 30.0% | |
| TGACATTGCAATTTAGCATA+TGG | - | chr3.1:85656750-85656769 | None:intergenic | 30.0% | |
| TGATAAGGTTATGGACAAAA+AGG | - | chr3.1:85657513-85657532 | None:intergenic | 30.0% | |
| TGGGATTTATACCTGAAAAT+TGG | - | chr3.1:85655647-85655666 | None:intergenic | 30.0% | |
| TGTTTAACACGTTTATCATG+TGG | - | chr3.1:85655622-85655641 | None:intergenic | 30.0% | |
| ! | AATAAACCTTTGTTTGGACT+TGG | - | chr3.1:85656672-85656691 | None:intergenic | 30.0% |
| ! | AATATGATTTGTGAGAAGGT+AGG | + | chr3.1:85656903-85656922 | MS.gene072954:CDS | 30.0% |
| ! | CATGAATTTGGTGACAAAAT+TGG | - | chr3.1:85655667-85655686 | None:intergenic | 30.0% |
| ! | CGAACTTTGTTGTATATATC+AGG | - | chr3.1:85657002-85657021 | None:intergenic | 30.0% |
| ! | CTTTTTATCGATGTCTACAA+AGG | - | chr3.1:85656946-85656965 | None:intergenic | 30.0% |
| ! | TACATACCTGAGAAATGTTT+TGG | - | chr3.1:85658360-85658379 | None:intergenic | 30.0% |
| ! | TTTCTTTTGGTAAACTCCTT+TGG | - | chr3.1:85656406-85656425 | None:intergenic | 30.0% |
| !! | AAGCTATAAATCCTAGCTTT+TGG | - | chr3.1:85658666-85658685 | None:intergenic | 30.0% |
| !! | ATGGATTTTGACATGTTTGA+TGG | + | chr3.1:85658588-85658607 | MS.gene072954:intron | 30.0% |
| !! | CGATTAGTTATCCATTTTAC+AGG | + | chr3.1:85656380-85656399 | MS.gene072954:intron | 30.0% |
| !! | CTATGTTTTTGATTGAAAGG+CGG | - | chr3.1:85657551-85657570 | None:intergenic | 30.0% |
| !! | TTTTGACTCTACCATCTTTA+TGG | - | chr3.1:85656514-85656533 | None:intergenic | 30.0% |
| !!! | AAGCTTTTTTCAACTAAGTG+GGG | - | chr3.1:85655830-85655849 | None:intergenic | 30.0% |
| !!! | ACTATTTTTTGTAATGGTCC+TGG | + | chr3.1:85657871-85657890 | MS.gene072954:intron | 30.0% |
| !!! | CAAGCTTTTTTCAACTAAGT+GGG | - | chr3.1:85655831-85655850 | None:intergenic | 30.0% |
| AACATGGTCACTTATGTTGT+TGG | - | chr3.1:85656589-85656608 | None:intergenic | 35.0% | |
| AAGACCATCAACCAATTACA+TGG | + | chr3.1:85657366-85657385 | MS.gene072954:CDS | 35.0% | |
| AATGAATTACGGACAAACCT+CGG | - | chr3.1:85657030-85657049 | None:intergenic | 35.0% | |
| AATGTCATAAGATTGCCCTT+TGG | + | chr3.1:85656763-85656782 | MS.gene072954:intron | 35.0% | |
| ACAAGAGGATGTTAAAGAGA+AGG | + | chr3.1:85656470-85656489 | MS.gene072954:CDS | 35.0% | |
| ACATGCAGATTGATCTATCT+AGG | + | chr3.1:85655910-85655929 | MS.gene072954:intron | 35.0% | |
| ACATTCTTGCATTGAAAGTG+TGG | - | chr3.1:85656622-85656641 | None:intergenic | 35.0% | |
| ACTCAGAATTACCAGATCAA+GGG | + | chr3.1:85655435-85655454 | MS.gene072954:CDS | 35.0% | |
| ACTTACATACCCAACTTTGA+AGG | - | chr3.1:85656025-85656044 | None:intergenic | 35.0% | |
| AGAATTCTAACTCTGAGCAA+CGG | - | chr3.1:85657910-85657929 | None:intergenic | 35.0% | |
| AGAGGTAGTAAAAATGGAGA+AGG | + | chr3.1:85658292-85658311 | MS.gene072954:CDS | 35.0% | |
| AGTGATTCTAACCAAAAGCT+AGG | + | chr3.1:85658652-85658671 | MS.gene072954:intron | 35.0% | |
| ATATATGCAGACTACAACTC+TGG | + | chr3.1:85659062-85659081 | MS.gene072954:intron | 35.0% | |
| ATTATGGCGTAATTTGATCC+TGG | + | chr3.1:85655797-85655816 | MS.gene072954:intron | 35.0% | |
| CAAGTTTGATTCAGAAACAC+AGG | + | chr3.1:85657804-85657823 | MS.gene072954:CDS | 35.0% | |
| CATCTTAGACCGAATGATAT+TGG | - | chr3.1:85658175-85658194 | None:intergenic | 35.0% | |
| CCACTTAGTTGAAAAAAGCT+TGG | + | chr3.1:85655829-85655848 | MS.gene072954:intron | 35.0% | |
| CTAACCTACTCTCTTTACTA+GGG | - | chr3.1:85656207-85656226 | None:intergenic | 35.0% | |
| GATCTGCAACTTAATACCAA+AGG | + | chr3.1:85659141-85659160 | MS.gene072954:CDS | 35.0% | |
| TAGTCAACATTTCATACCCA+TGG | - | chr3.1:85658983-85659002 | None:intergenic | 35.0% | |
| TATTCCTCAGAAACCTGAAA+AGG | - | chr3.1:85657725-85657744 | None:intergenic | 35.0% | |
| TCAGAAACCTGAAAAGGAAT+AGG | - | chr3.1:85657719-85657738 | None:intergenic | 35.0% | |
| TCTAACCTACTCTCTTTACT+AGG | - | chr3.1:85656208-85656227 | None:intergenic | 35.0% | |
| TCTCTTCACCTCTTAACTAT+TGG | - | chr3.1:85656242-85656261 | None:intergenic | 35.0% | |
| TGCAAAATGAAATATGCTCC+TGG | - | chr3.1:85657198-85657217 | None:intergenic | 35.0% | |
| TTACTGTGAACCTCATTGAT+CGG | + | chr3.1:85657771-85657790 | MS.gene072954:CDS | 35.0% | |
| TTCTCCATGTAATTGGTTGA+TGG | - | chr3.1:85657373-85657392 | None:intergenic | 35.0% | |
| TTGGACATACAATGTTCAGT+TGG | - | chr3.1:85656570-85656589 | None:intergenic | 35.0% | |
| TTGGTTAGAATCACTTCTTG+AGG | - | chr3.1:85658647-85658666 | None:intergenic | 35.0% | |
| TTGTAGAATCTCATCTTAGG+TGG | + | chr3.1:85656157-85656176 | MS.gene072954:intron | 35.0% | |
| ! | AGATGCACTTCTTTTCTTCA+TGG | + | chr3.1:85658190-85658209 | MS.gene072954:intron | 35.0% |
| ! | CTCAGAAGAAACAACCTTTT+TGG | - | chr3.1:85655515-85655534 | None:intergenic | 35.0% |
| ! | TTACCATCAAGCTTTTGTTG+TGG | + | chr3.1:85657678-85657697 | MS.gene072954:intron | 35.0% |
| ! | TTAGTATGTGTTTGGTTTCG+TGG | + | chr3.1:85658533-85658552 | MS.gene072954:intron | 35.0% |
| ! | TTATCCATTTTACAGGCCAA+AGG | + | chr3.1:85656387-85656406 | MS.gene072954:intron | 35.0% |
| ! | TTGTGCTGATGAAACTTCAA+TGG | - | chr3.1:85656454-85656473 | None:intergenic | 35.0% |
| !! | AAGTGGTTCTAGACACAAAA+TGG | + | chr3.1:85658569-85658588 | MS.gene072954:intron | 35.0% |
| !! | AATTCTGATTGATTGGCTTG+TGG | + | chr3.1:85657426-85657445 | MS.gene072954:CDS | 35.0% |
| !! | CTGGATTATTTTATGCTGAC+AGG | + | chr3.1:85658771-85658790 | MS.gene072954:intron | 35.0% |
| !! | TTTGTGTCTAGAACCACTTT+TGG | - | chr3.1:85658568-85658587 | None:intergenic | 35.0% |
| !! | TTTTGTTGTGGCTTTGCTAA+AGG | + | chr3.1:85657690-85657709 | MS.gene072954:intron | 35.0% |
| !!! | CCAAGCTTTTTTCAACTAAG+TGG | - | chr3.1:85655832-85655851 | None:intergenic | 35.0% |
| !!! | CTGAGAAATGTTTTGGTTGT+GGG | - | chr3.1:85658353-85658372 | None:intergenic | 35.0% |
| !!! | TATTCCTTTTCAGGTTTCTG+AGG | + | chr3.1:85657718-85657737 | MS.gene072954:intron | 35.0% |
| !!! | TTTTTTCAACTAAGTGGGGT+CGG | - | chr3.1:85655826-85655845 | None:intergenic | 35.0% |
| AAAACCAGTTGTTCTTGCAC+TGG | + | chr3.1:85659116-85659135 | MS.gene072954:CDS | 40.0% | |
| AACCAAAGTTACTGCAGCAA+TGG | - | chr3.1:85656541-85656560 | None:intergenic | 40.0% | |
| AACGGGAACTTATGTTAACC+AGG | - | chr3.1:85657892-85657911 | None:intergenic | 40.0% | |
| AACTCCTTTGGCCTGTAAAA+TGG | - | chr3.1:85656394-85656413 | None:intergenic | 40.0% | |
| AAGAGCAACAGCTTCCAAAA+AGG | + | chr3.1:85655498-85655517 | MS.gene072954:CDS | 40.0% | |
| AAGCAAAATTCTTCCACTCG+AGG | - | chr3.1:85658245-85658264 | None:intergenic | 40.0% | |
| AAGCCACAACAAAAGCTTGA+TGG | - | chr3.1:85657684-85657703 | None:intergenic | 40.0% | |
| AAGCCACTAACTCACTAGAA+AGG | + | chr3.1:85656812-85656831 | MS.gene072954:intron | 40.0% | |
| AAGTCAGCTGAAATTGCTAG+AGG | + | chr3.1:85656041-85656060 | MS.gene072954:intron | 40.0% | |
| AATTACCAGATCAAGGGCAA+AGG | + | chr3.1:85655441-85655460 | MS.gene072954:CDS | 40.0% | |
| ACAGTAAACTGAGGATCGAA+AGG | - | chr3.1:85658011-85658030 | None:intergenic | 40.0% | |
| AGCAGCACAATCTTCTTACA+AGG | + | chr3.1:85658476-85658495 | MS.gene072954:CDS | 40.0% | |
| AGTCAGCTGAAATTGCTAGA+GGG | + | chr3.1:85656042-85656061 | MS.gene072954:intron | 40.0% | |
| ATCATCTCCACAGTAAACTG+AGG | - | chr3.1:85658020-85658039 | None:intergenic | 40.0% | |
| ATGCAAGAATGTGTGAACTC+TGG | + | chr3.1:85656630-85656649 | MS.gene072954:CDS | 40.0% | |
| ATGTTCCTCACCGTAAAAGA+AGG | + | chr3.1:85655560-85655579 | MS.gene072954:CDS | 40.0% | |
| CACTCAGAATTACCAGATCA+AGG | + | chr3.1:85655434-85655453 | MS.gene072954:CDS | 40.0% | |
| CAGATAACTGAAAACGCAGA+AGG | - | chr3.1:85658328-85658347 | None:intergenic | 40.0% | |
| CATTGCAAAATCAAACACGC+TGG | + | chr3.1:85658752-85658771 | MS.gene072954:intron | 40.0% | |
| CCACAACCAAAACATTTCTC+AGG | + | chr3.1:85658351-85658370 | MS.gene072954:CDS | 40.0% | |
| CTGCAACTTCTCCATGTAAT+TGG | - | chr3.1:85657380-85657399 | None:intergenic | 40.0% | |
| CTTGATCTGGTAATTCTGAG+TGG | - | chr3.1:85655436-85655455 | None:intergenic | 40.0% | |
| GAATTCTAACTCTGAGCAAC+GGG | - | chr3.1:85657909-85657928 | None:intergenic | 40.0% | |
| GATCAATGAGGTTCACAGTA+AGG | - | chr3.1:85657772-85657791 | None:intergenic | 40.0% | |
| GTGGTAGAGATAACCAAAAG+TGG | + | chr3.1:85658552-85658571 | MS.gene072954:intron | 40.0% | |
| TATCGATGTCTACAAAGGTC+AGG | - | chr3.1:85656941-85656960 | None:intergenic | 40.0% | |
| TGAAGTTTCATCAGCACAAG+AGG | + | chr3.1:85656455-85656474 | MS.gene072954:CDS | 40.0% | |
| TGCGTGGAATTCTGATTGAT+TGG | + | chr3.1:85657419-85657438 | MS.gene072954:CDS | 40.0% | |
| TGTTCCTCACCGTAAAAGAA+GGG | + | chr3.1:85655561-85655580 | MS.gene072954:CDS | 40.0% | |
| TTGAGAGAAACCGATCAATG+AGG | - | chr3.1:85657784-85657803 | None:intergenic | 40.0% | |
| TTTCGATCCTCAGTTTACTG+TGG | + | chr3.1:85658010-85658029 | MS.gene072954:intron | 40.0% | |
| TTTGCTCGACCAAGTTCAAT+TGG | - | chr3.1:85655987-85656006 | None:intergenic | 40.0% | |
| ! | AGATCAAGGGCAAAGGTTTT+GGG | + | chr3.1:85655448-85655467 | MS.gene072954:CDS | 40.0% |
| ! | GCTCTGCTAAATAATTTGCC+AGG | - | chr3.1:85658862-85658881 | None:intergenic | 40.0% |
| ! | GGTTTCTGAGGAATATAAGC+TGG | + | chr3.1:85657730-85657749 | MS.gene072954:intron | 40.0% |
| ! | TCACCTTTCTAGTGAGTTAG+TGG | - | chr3.1:85656818-85656837 | None:intergenic | 40.0% |
| ! | TGTAAGAAGATTGTGCTGCT+TGG | - | chr3.1:85658476-85658495 | None:intergenic | 40.0% |
| ! | TTCCCTTCATTTTCCGAAGA+GGG | - | chr3.1:85655478-85655497 | None:intergenic | 40.0% |
| ! | TTTCCCTTCATTTTCCGAAG+AGG | - | chr3.1:85655479-85655498 | None:intergenic | 40.0% |
| !! | AAGGTGTCCTATTCCTTTTC+AGG | + | chr3.1:85657709-85657728 | MS.gene072954:intron | 40.0% |
| !! | ACAGTAAGGTAAAGAGTGTC+TGG | - | chr3.1:85657758-85657777 | None:intergenic | 40.0% |
| !! | TAGCTCTGAAGCTTTGTAGT+TGG | - | chr3.1:85659097-85659116 | None:intergenic | 40.0% |
| !!! | CCTGAGAAATGTTTTGGTTG+TGG | - | chr3.1:85658354-85658373 | None:intergenic | 40.0% |
| ACAGTTTCTACCTTCTCGTG+TGG | + | chr3.1:85658907-85658926 | MS.gene072954:CDS | 45.0% | |
| ACCTCTCCAAGTCCAAACAA+AGG | + | chr3.1:85656663-85656682 | MS.gene072954:CDS | 45.0% | |
| AGCATGGAGAGAACAACCTT+TGG | - | chr3.1:85659160-85659179 | None:intergenic | 45.0% | |
| AGGAATTCCAGTTCAGCAAG+AGG | - | chr3.1:85658842-85658861 | None:intergenic | 45.0% | |
| ATCAGAATTCCACGCATGCT+TGG | - | chr3.1:85657415-85657434 | None:intergenic | 45.0% | |
| CAAAACCTTTGCCCTTGATC+TGG | - | chr3.1:85655449-85655468 | None:intergenic | 45.0% | |
| CAACCACTCAGAACATCCAT+GGG | + | chr3.1:85658964-85658983 | MS.gene072954:CDS | 45.0% | |
| CACCATTGCTGCAGTAACTT+TGG | + | chr3.1:85656536-85656555 | MS.gene072954:CDS | 45.0% | |
| GACCCTCTTCGGAAAATGAA+GGG | + | chr3.1:85655473-85655492 | MS.gene072954:CDS | 45.0% | |
| GAGACCCTAGTAAAGAGAGT+AGG | + | chr3.1:85656200-85656219 | MS.gene072954:intron | 45.0% | |
| GATATTTCTCCAAGCATGCG+TGG | + | chr3.1:85657403-85657422 | MS.gene072954:CDS | 45.0% | |
| GTCAGCTGAAATTGCTAGAG+GGG | + | chr3.1:85656043-85656062 | MS.gene072954:intron | 45.0% | |
| GTGTGGTGTCTGTCATAACA+TGG | - | chr3.1:85656605-85656624 | None:intergenic | 45.0% | |
| TCAACCACTCAGAACATCCA+TGG | + | chr3.1:85658963-85658982 | MS.gene072954:CDS | 45.0% | |
| TCTTCCAGTGCAAGAACAAC+TGG | - | chr3.1:85659123-85659142 | None:intergenic | 45.0% | |
| TCTTGCTGAACTGGAATTCC+TGG | + | chr3.1:85658841-85658860 | MS.gene072954:CDS | 45.0% | |
| TGCAAGTAACACCAAGCAAC+TGG | - | chr3.1:85657832-85657851 | None:intergenic | 45.0% | |
| TTAGGTGGTAGAGACATGTG+TGG | + | chr3.1:85656172-85656191 | MS.gene072954:intron | 45.0% | |
| ! | ACCTTTGTTTGGACTTGGAG+AGG | - | chr3.1:85656667-85656686 | None:intergenic | 45.0% |
| ! | ATACCCATGGATGTTCTGAG+TGG | - | chr3.1:85658970-85658989 | None:intergenic | 45.0% |
| ! | ATGGATGTTCTGAGTGGTTG+AGG | - | chr3.1:85658964-85658983 | None:intergenic | 45.0% |
| ! | CAGATCAAGGGCAAAGGTTT+TGG | + | chr3.1:85655447-85655466 | MS.gene072954:CDS | 45.0% |
| ! | CTTTTACGGTGAGGAACATC+AGG | - | chr3.1:85655559-85655578 | None:intergenic | 45.0% |
| ! | TAAGCCCTGCCCTTCTTTTA+CGG | - | chr3.1:85655573-85655592 | None:intergenic | 45.0% |
| ! | TGGATGTTCTGAGTGGTTGA+GGG | - | chr3.1:85658963-85658982 | None:intergenic | 45.0% |
| !! | GCAAGTATTCTAGGATAGCC+AGG | + | chr3.1:85657177-85657196 | MS.gene072954:intron | 45.0% |
| !! | TCTGATTGATTGGCTTGTGG+AGG | + | chr3.1:85657429-85657448 | MS.gene072954:CDS | 45.0% |
| !! | ATTATTATTACTTTATAATA+GGG | + | chr3.1:85657121-85657140 | MS.gene072954:intron | 5.0% |
| !! | TATTATTATTACTTTATAAT+AGG | + | chr3.1:85657120-85657139 | MS.gene072954:intron | 5.0% |
| AAACACAGGCTCCAGTTGCT+TGG | + | chr3.1:85657818-85657837 | MS.gene072954:CDS | 50.0% | |
| ACAGGTTCCTCTTGCTGAAC+TGG | + | chr3.1:85658832-85658851 | MS.gene072954:intron | 50.0% | |
| CAACAAAGTTCGAGTCACCG+AGG | + | chr3.1:85657010-85657029 | MS.gene072954:CDS | 50.0% | |
| CTCACCGTAAAAGAAGGGCA+GGG | + | chr3.1:85655566-85655585 | MS.gene072954:CDS | 50.0% | |
| CTGCTGTATTCCTTGCCAGA+TGG | + | chr3.1:85658936-85658955 | MS.gene072954:CDS | 50.0% | |
| GAGTGGACGCTCTTCATCTT+TGG | - | chr3.1:85655419-85655438 | None:intergenic | 50.0% | |
| GGACCCTCTTCGGAAAATGA+AGG | + | chr3.1:85655472-85655491 | MS.gene072954:CDS | 50.0% | |
| TTGTGAGAAGGTAGGAGCCT+CGG | + | chr3.1:85656911-85656930 | MS.gene072954:CDS | 50.0% | |
| !!! | TCAAGGGCAAAGGTTTTGGG+AGG | + | chr3.1:85655451-85655470 | MS.gene072954:CDS | 50.0% |
| AGAGATGTGTGCTCCTCGAG+TGG | + | chr3.1:85658229-85658248 | MS.gene072954:CDS | 55.0% | |
| CCTCACCGTAAAAGAAGGGC+AGG | + | chr3.1:85655565-85655584 | MS.gene072954:CDS | 55.0% | |
| GCTTGTGGAGGTCAGTCTTG+TGG | + | chr3.1:85657441-85657460 | MS.gene072954:intron | 55.0% | |
| TACAAAGGTCAGGCGATCCG+AGG | - | chr3.1:85656931-85656950 | None:intergenic | 55.0% | |
| TGAGTGGTTGAGGGTCCATC+TGG | - | chr3.1:85658954-85658973 | None:intergenic | 55.0% | |
| ! | CCTGCCCTTCTTTTACGGTG+AGG | - | chr3.1:85655568-85655587 | None:intergenic | 55.0% |
| ! | GGAGGTCAGTCTTGTGGCAT+TGG | + | chr3.1:85657447-85657466 | MS.gene072954:intron | 55.0% |
| !!! | GGTTTTGGGAGGACCCTCTT+CGG | + | chr3.1:85655462-85655481 | MS.gene072954:CDS | 55.0% |
| ACTAAGTGGGGTCGGCTACC+AGG | - | chr3.1:85655818-85655837 | None:intergenic | 60.0% | |
| GCAGAAGCAGCCACACGAGA+AGG | - | chr3.1:85658920-85658939 | None:intergenic | 60.0% | |
| GGTTGAGGGTCCATCTGGCA+AGG | - | chr3.1:85658949-85658968 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 85655388 | 85659206 | 85655388 | ID=MS.gene072954 |
| chr3.1 | mRNA | 85655388 | 85659206 | 85655388 | ID=MS.gene072954.t1;Parent=MS.gene072954 |
| chr3.1 | exon | 85655388 | 85655654 | 85655388 | ID=MS.gene072954.t1.exon1;Parent=MS.gene072954.t1 |
| chr3.1 | CDS | 85655388 | 85655654 | 85655388 | ID=cds.MS.gene072954.t1;Parent=MS.gene072954.t1 |
| chr3.1 | exon | 85656402 | 85656684 | 85656402 | ID=MS.gene072954.t1.exon2;Parent=MS.gene072954.t1 |
| chr3.1 | CDS | 85656402 | 85656684 | 85656402 | ID=cds.MS.gene072954.t1;Parent=MS.gene072954.t1 |
| chr3.1 | exon | 85656898 | 85657031 | 85656898 | ID=MS.gene072954.t1.exon3;Parent=MS.gene072954.t1 |
| chr3.1 | CDS | 85656898 | 85657031 | 85656898 | ID=cds.MS.gene072954.t1;Parent=MS.gene072954.t1 |
| chr3.1 | exon | 85657358 | 85657450 | 85657358 | ID=MS.gene072954.t1.exon4;Parent=MS.gene072954.t1 |
| chr3.1 | CDS | 85657358 | 85657450 | 85657358 | ID=cds.MS.gene072954.t1;Parent=MS.gene072954.t1 |
| chr3.1 | exon | 85657731 | 85657864 | 85657731 | ID=MS.gene072954.t1.exon5;Parent=MS.gene072954.t1 |
| chr3.1 | CDS | 85657731 | 85657864 | 85657731 | ID=cds.MS.gene072954.t1;Parent=MS.gene072954.t1 |
| chr3.1 | exon | 85658220 | 85658372 | 85658220 | ID=MS.gene072954.t1.exon6;Parent=MS.gene072954.t1 |
| chr3.1 | CDS | 85658220 | 85658372 | 85658220 | ID=cds.MS.gene072954.t1;Parent=MS.gene072954.t1 |
| chr3.1 | exon | 85658464 | 85658497 | 85658464 | ID=MS.gene072954.t1.exon7;Parent=MS.gene072954.t1 |
| chr3.1 | CDS | 85658464 | 85658497 | 85658464 | ID=cds.MS.gene072954.t1;Parent=MS.gene072954.t1 |
| chr3.1 | exon | 85658836 | 85658985 | 85658836 | ID=MS.gene072954.t1.exon8;Parent=MS.gene072954.t1 |
| chr3.1 | CDS | 85658836 | 85658985 | 85658836 | ID=cds.MS.gene072954.t1;Parent=MS.gene072954.t1 |
| chr3.1 | exon | 85659072 | 85659206 | 85659072 | ID=MS.gene072954.t1.exon9;Parent=MS.gene072954.t1 |
| chr3.1 | CDS | 85659072 | 85659206 | 85659072 | ID=cds.MS.gene072954.t1;Parent=MS.gene072954.t1 |
| Gene Sequence |
| Protein sequence |
