Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067144.t1 | XP_024635368.1 | 95.4 | 481 | 19 | 1 | 1 | 481 | 1 | 478 | 2.20E-251 | 877.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067144.t1 | Q147G5 | 51.3 | 470 | 167 | 9 | 13 | 477 | 22 | 434 | 2.6e-107 | 390.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067144.t1 | G7JBQ1 | 95.4 | 481 | 19 | 1 | 1 | 481 | 1 | 478 | 1.6e-251 | 877.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049397 | MS.gene067144 | 0.81122 | 7.81E-51 | -1.69E-46 |
MS.gene049418 | MS.gene067144 | 0.808634 | 2.81E-50 | -1.69E-46 |
MS.gene049596 | MS.gene067144 | 0.80711 | 5.93E-50 | -1.69E-46 |
MS.gene049622 | MS.gene067144 | 0.810648 | 1.04E-50 | -1.69E-46 |
MS.gene04985 | MS.gene067144 | 0.809693 | 1.67E-50 | -1.69E-46 |
MS.gene049989 | MS.gene067144 | 0.899363 | 2.13E-77 | -1.69E-46 |
MS.gene050297 | MS.gene067144 | 0.881452 | 2.37E-70 | -1.69E-46 |
MS.gene05054 | MS.gene067144 | 0.804751 | 1.86E-49 | -1.69E-46 |
MS.gene051094 | MS.gene067144 | 0.837661 | 4.56E-57 | -1.69E-46 |
MS.gene05124 | MS.gene067144 | 0.818353 | 2.05E-52 | -1.69E-46 |
MS.gene051263 | MS.gene067144 | 0.827198 | 1.79E-54 | -1.69E-46 |
MS.gene051629 | MS.gene067144 | 0.83924 | 1.78E-57 | -1.69E-46 |
MS.gene051742 | MS.gene067144 | 0.829116 | 6.16E-55 | -1.69E-46 |
MS.gene051816 | MS.gene067144 | 0.81614 | 6.45E-52 | -1.69E-46 |
MS.gene051955 | MS.gene067144 | 0.870863 | 1.06E-66 | -1.69E-46 |
MS.gene052143 | MS.gene067144 | 0.864778 | 9.52E-65 | -1.69E-46 |
MS.gene052308 | MS.gene067144 | 0.826509 | 2.61E-54 | -1.69E-46 |
MS.gene052367 | MS.gene067144 | 0.89056 | 8.83E-74 | -1.69E-46 |
MS.gene053173 | MS.gene067144 | 0.841334 | 5.06E-58 | -1.69E-46 |
MS.gene053348 | MS.gene067144 | 0.849146 | 3.90E-60 | -1.69E-46 |
MS.gene053416 | MS.gene067144 | 0.872974 | 2.11E-67 | -1.69E-46 |
MS.gene053417 | MS.gene067144 | 0.871272 | 7.75E-67 | -1.69E-46 |
MS.gene053500 | MS.gene067144 | 0.80243 | 5.63E-49 | -1.69E-46 |
MS.gene05369 | MS.gene067144 | 0.828107 | 1.08E-54 | -1.69E-46 |
MS.gene053929 | MS.gene067144 | 0.814305 | 1.65E-51 | -1.69E-46 |
MS.gene054551 | MS.gene067144 | 0.855956 | 4.45E-62 | -1.69E-46 |
MS.gene054552 | MS.gene067144 | 0.812301 | 4.54E-51 | -1.69E-46 |
MS.gene054593 | MS.gene067144 | 0.84759 | 1.05E-59 | -1.69E-46 |
MS.gene054643 | MS.gene067144 | 0.836597 | 8.53E-57 | -1.69E-46 |
MS.gene055308 | MS.gene067144 | 0.840931 | 6.46E-58 | -1.69E-46 |
MS.gene055411 | MS.gene067144 | 0.831725 | 1.42E-55 | -1.69E-46 |
MS.gene055578 | MS.gene067144 | 0.854065 | 1.58E-61 | -1.69E-46 |
MS.gene055579 | MS.gene067144 | 0.8327 | 8.14E-56 | -1.69E-46 |
MS.gene055781 | MS.gene067144 | 0.800598 | 1.34E-48 | -1.69E-46 |
MS.gene055957 | MS.gene067144 | 0.870344 | 1.57E-66 | -1.69E-46 |
MS.gene056041 | MS.gene067144 | 0.922943 | 5.09E-89 | -1.69E-46 |
MS.gene056042 | MS.gene067144 | 0.88676 | 2.58E-72 | -1.69E-46 |
MS.gene056335 | MS.gene067144 | 0.812056 | 5.14E-51 | -1.69E-46 |
MS.gene05640 | MS.gene067144 | 0.829841 | 4.11E-55 | -1.69E-46 |
MS.gene056526 | MS.gene067144 | 0.889963 | 1.51E-73 | -1.69E-46 |
MS.gene056528 | MS.gene067144 | 0.845456 | 4.02E-59 | -1.69E-46 |
MS.gene057358 | MS.gene067144 | 0.815049 | 1.13E-51 | -1.69E-46 |
MS.gene057359 | MS.gene067144 | 0.802185 | 6.32E-49 | -1.69E-46 |
MS.gene057458 | MS.gene067144 | 0.83807 | 3.58E-57 | -1.69E-46 |
MS.gene057483 | MS.gene067144 | 0.813216 | 2.86E-51 | -1.69E-46 |
MS.gene058196 | MS.gene067144 | 0.873509 | 1.39E-67 | -1.69E-46 |
MS.gene058197 | MS.gene067144 | 0.879876 | 8.71E-70 | -1.69E-46 |
MS.gene058198 | MS.gene067144 | 0.875484 | 2.97E-68 | -1.69E-46 |
MS.gene058818 | MS.gene067144 | 0.827934 | 1.19E-54 | -1.69E-46 |
MS.gene058827 | MS.gene067144 | 0.805524 | 1.28E-49 | -1.69E-46 |
MS.gene058853 | MS.gene067144 | 0.819857 | 9.32E-53 | -1.69E-46 |
MS.gene059300 | MS.gene067144 | 0.887651 | 1.18E-72 | -1.69E-46 |
MS.gene059553 | MS.gene067144 | 0.861173 | 1.24E-63 | -1.69E-46 |
MS.gene060473 | MS.gene067144 | 0.897061 | 2.03E-76 | -1.69E-46 |
MS.gene060492 | MS.gene067144 | 0.828181 | 1.04E-54 | -1.69E-46 |
MS.gene060565 | MS.gene067144 | 0.900647 | 5.94E-78 | -1.69E-46 |
MS.gene06057 | MS.gene067144 | 0.901063 | 3.91E-78 | -1.69E-46 |
MS.gene06093 | MS.gene067144 | 0.844605 | 6.82E-59 | -1.69E-46 |
MS.gene061099 | MS.gene067144 | 0.890644 | 8.18E-74 | -1.69E-46 |
MS.gene061260 | MS.gene067144 | 0.862029 | 6.77E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene28739 | MS.gene067144 | PPI |
MS.gene067144 | MS.gene028366 | PPI |
MS.gene36273 | MS.gene067144 | PPI |
MS.gene65301 | MS.gene067144 | PPI |
MS.gene35086 | MS.gene067144 | PPI |
MS.gene007487 | MS.gene067144 | PPI |
MS.gene018518 | MS.gene067144 | PPI |
MS.gene067144 | MS.gene00478 | PPI |
MS.gene067144 | MS.gene62819 | PPI |
MS.gene36271 | MS.gene067144 | PPI |
MS.gene67884 | MS.gene067144 | PPI |
MS.gene067144 | MS.gene033401 | PPI |
MS.gene065314 | MS.gene067144 | PPI |
MS.gene067144 | MS.gene044085 | PPI |
MS.gene67555 | MS.gene067144 | PPI |
MS.gene067144 | MS.gene09785 | PPI |
MS.gene22482 | MS.gene067144 | PPI |
MS.gene061932 | MS.gene067144 | PPI |
MS.gene067144 | MS.gene00063 | PPI |
MS.gene067144 | MS.gene007485 | PPI |
MS.gene067144 | MS.gene71260 | PPI |
MS.gene007486 | MS.gene067144 | PPI |
MS.gene067144 | MS.gene37226 | PPI |
MS.gene89090 | MS.gene067144 | PPI |
MS.gene011448 | MS.gene067144 | PPI |
MS.gene55900 | MS.gene067144 | PPI |
MS.gene067144 | MS.gene68361 | PPI |
MS.gene067144 | MS.gene24450 | PPI |
MS.gene00474 | MS.gene067144 | PPI |
MS.gene36424 | MS.gene067144 | PPI |
MS.gene067144 | MS.gene64859 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067144.t1 | MTR_3g107970 | 95.426 | 481 | 19 | 1 | 1 | 481 | 1 | 478 | 0.0 | 947 |
MS.gene067144.t1 | MTR_1g011470 | 58.099 | 463 | 138 | 7 | 17 | 477 | 14 | 422 | 0.0 | 518 |
MS.gene067144.t1 | MTR_2g102520 | 48.354 | 486 | 218 | 13 | 11 | 477 | 8 | 479 | 1.01e-130 | 387 |
MS.gene067144.t1 | MTR_2g102550 | 44.000 | 475 | 202 | 7 | 3 | 469 | 2 | 420 | 9.68e-124 | 368 |
MS.gene067144.t1 | MTR_3g088415 | 54.643 | 280 | 125 | 2 | 201 | 478 | 225 | 504 | 1.08e-103 | 319 |
MS.gene067144.t1 | MTR_3g088405 | 53.704 | 270 | 123 | 1 | 200 | 467 | 227 | 496 | 3.71e-103 | 318 |
MS.gene067144.t1 | MTR_1g018680 | 51.095 | 274 | 132 | 1 | 205 | 476 | 80 | 353 | 3.15e-91 | 282 |
MS.gene067144.t1 | MTR_3g088415 | 58.986 | 217 | 89 | 0 | 200 | 416 | 224 | 440 | 2.11e-90 | 283 |
MS.gene067144.t1 | MTR_3g102530 | 48.029 | 279 | 143 | 1 | 196 | 472 | 64 | 342 | 9.03e-86 | 268 |
MS.gene067144.t1 | MTR_3g102510 | 46.212 | 264 | 142 | 0 | 209 | 472 | 67 | 330 | 8.32e-81 | 254 |
MS.gene067144.t1 | MTR_3g102520 | 46.324 | 272 | 144 | 1 | 203 | 472 | 78 | 349 | 2.80e-79 | 251 |
MS.gene067144.t1 | MTR_3g102560 | 50.787 | 254 | 118 | 2 | 221 | 472 | 69 | 317 | 1.10e-73 | 235 |
MS.gene067144.t1 | MTR_3g102540 | 50.781 | 256 | 116 | 5 | 220 | 472 | 13 | 261 | 2.74e-72 | 230 |
MS.gene067144.t1 | MTR_3g088415 | 62.805 | 164 | 61 | 0 | 200 | 363 | 224 | 387 | 2.44e-71 | 232 |
MS.gene067144.t1 | MTR_5g023790 | 40.959 | 271 | 152 | 4 | 201 | 470 | 156 | 419 | 1.54e-57 | 196 |
MS.gene067144.t1 | MTR_5g088980 | 40.590 | 271 | 152 | 6 | 202 | 470 | 150 | 413 | 2.58e-57 | 196 |
MS.gene067144.t1 | MTR_5g023790 | 43.966 | 232 | 122 | 4 | 201 | 431 | 156 | 380 | 4.14e-55 | 189 |
MS.gene067144.t1 | MTR_8g074000 | 39.608 | 255 | 147 | 3 | 216 | 470 | 176 | 423 | 6.32e-55 | 190 |
MS.gene067144.t1 | MTR_7g089080 | 40.511 | 274 | 154 | 7 | 201 | 470 | 183 | 451 | 2.44e-54 | 197 |
MS.gene067144.t1 | MTR_5g023790 | 44.643 | 168 | 91 | 2 | 201 | 367 | 156 | 322 | 1.56e-39 | 146 |
MS.gene067144.t1 | MTR_3g060770 | 30.556 | 252 | 160 | 7 | 185 | 431 | 2 | 243 | 1.56e-25 | 106 |
MS.gene067144.t1 | MTR_3g061680 | 30.638 | 235 | 149 | 6 | 202 | 431 | 8 | 233 | 8.05e-25 | 104 |
MS.gene067144.t1 | MTR_3g060410 | 34.375 | 192 | 117 | 5 | 245 | 431 | 131 | 318 | 1.00e-24 | 105 |
MS.gene067144.t1 | MTR_3g060400 | 31.250 | 224 | 140 | 6 | 213 | 431 | 25 | 239 | 1.27e-24 | 103 |
MS.gene067144.t1 | MTR_3g460990 | 31.250 | 224 | 140 | 6 | 213 | 431 | 25 | 239 | 1.27e-24 | 103 |
MS.gene067144.t1 | MTR_3g060820 | 30.204 | 245 | 151 | 7 | 192 | 431 | 4 | 233 | 7.76e-24 | 101 |
MS.gene067144.t1 | MTR_1g032850 | 35.359 | 181 | 103 | 5 | 234 | 411 | 362 | 531 | 1.43e-18 | 89.0 |
MS.gene067144.t1 | MTR_5g044040 | 40.260 | 77 | 46 | 0 | 271 | 347 | 7 | 83 | 8.53e-17 | 77.0 |
MS.gene067144.t1 | MTR_5g011900 | 29.730 | 148 | 101 | 2 | 242 | 388 | 95 | 240 | 3.02e-15 | 75.9 |
MS.gene067144.t1 | MTR_3g100710 | 28.571 | 182 | 117 | 4 | 228 | 400 | 74 | 251 | 2.83e-14 | 74.7 |
MS.gene067144.t1 | MTR_6g045270 | 27.972 | 286 | 171 | 13 | 208 | 481 | 38 | 300 | 2.53e-13 | 71.2 |
MS.gene067144.t1 | MTR_4g080990 | 26.816 | 179 | 124 | 4 | 228 | 400 | 69 | 246 | 1.92e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067144.t1 | AT5G25380 | 51.363 | 477 | 169 | 10 | 10 | 477 | 19 | 441 | 6.39e-147 | 427 |
MS.gene067144.t1 | AT5G11300 | 51.489 | 470 | 166 | 10 | 13 | 477 | 22 | 434 | 6.70e-147 | 427 |
MS.gene067144.t1 | AT5G25380 | 50.420 | 476 | 169 | 8 | 10 | 477 | 19 | 435 | 1.79e-145 | 424 |
MS.gene067144.t1 | AT5G25380 | 50.420 | 476 | 169 | 8 | 10 | 477 | 19 | 435 | 1.79e-145 | 424 |
MS.gene067144.t1 | AT5G25380 | 50.327 | 459 | 162 | 7 | 10 | 461 | 19 | 418 | 6.31e-141 | 411 |
MS.gene067144.t1 | AT1G80370 | 47.072 | 444 | 195 | 6 | 31 | 469 | 42 | 450 | 6.78e-129 | 382 |
MS.gene067144.t1 | AT1G15570 | 48.463 | 423 | 187 | 7 | 62 | 477 | 52 | 450 | 4.51e-126 | 374 |
MS.gene067144.t1 | AT5G11300 | 49.392 | 411 | 147 | 9 | 13 | 419 | 22 | 375 | 8.64e-119 | 355 |
MS.gene067144.t1 | AT1G44110 | 55.147 | 272 | 122 | 0 | 196 | 467 | 174 | 445 | 5.09e-110 | 334 |
MS.gene067144.t1 | AT5G43080 | 52.399 | 271 | 129 | 0 | 202 | 472 | 73 | 343 | 6.86e-100 | 304 |
MS.gene067144.t1 | AT5G43080 | 52.768 | 271 | 123 | 1 | 202 | 472 | 73 | 338 | 5.72e-99 | 301 |
MS.gene067144.t1 | AT1G47210 | 49.324 | 296 | 146 | 2 | 179 | 472 | 67 | 360 | 3.32e-98 | 300 |
MS.gene067144.t1 | AT1G77390 | 52.500 | 280 | 131 | 2 | 200 | 477 | 162 | 441 | 1.18e-96 | 299 |
MS.gene067144.t1 | AT1G47220 | 52.416 | 269 | 126 | 1 | 202 | 468 | 42 | 310 | 1.45e-92 | 284 |
MS.gene067144.t1 | AT1G47230 | 48.905 | 274 | 138 | 1 | 201 | 472 | 80 | 353 | 1.51e-90 | 280 |
MS.gene067144.t1 | AT1G47230 | 48.727 | 275 | 138 | 2 | 201 | 472 | 80 | 354 | 1.06e-88 | 276 |
MS.gene067144.t1 | AT5G06150 | 40.278 | 288 | 161 | 6 | 193 | 479 | 158 | 435 | 6.52e-59 | 201 |
MS.gene067144.t1 | AT1G20610 | 39.114 | 271 | 157 | 4 | 201 | 470 | 161 | 424 | 1.24e-55 | 191 |
MS.gene067144.t1 | AT1G76310 | 40.146 | 274 | 155 | 5 | 199 | 470 | 159 | 425 | 3.63e-55 | 190 |
MS.gene067144.t1 | AT3G11520 | 40.959 | 271 | 151 | 5 | 201 | 470 | 143 | 405 | 1.73e-53 | 185 |
MS.gene067144.t1 | AT1G76310 | 43.404 | 235 | 124 | 5 | 199 | 431 | 159 | 386 | 2.46e-52 | 182 |
MS.gene067144.t1 | AT3G11520 | 44.351 | 239 | 124 | 5 | 201 | 438 | 143 | 373 | 2.69e-52 | 181 |
MS.gene067144.t1 | AT2G26760 | 40.769 | 260 | 143 | 7 | 201 | 457 | 114 | 365 | 4.02e-52 | 181 |
MS.gene067144.t1 | AT1G16330 | 39.216 | 255 | 148 | 3 | 216 | 470 | 395 | 642 | 1.04e-49 | 180 |
MS.gene067144.t1 | AT1G76310 | 36.424 | 302 | 155 | 6 | 199 | 470 | 159 | 453 | 2.59e-49 | 175 |
MS.gene067144.t1 | AT4G37490 | 37.050 | 278 | 160 | 8 | 200 | 470 | 148 | 417 | 5.99e-49 | 174 |
MS.gene067144.t1 | AT2G17620 | 40.672 | 268 | 151 | 4 | 201 | 467 | 155 | 415 | 3.36e-48 | 172 |
MS.gene067144.t1 | AT4G35620 | 39.700 | 267 | 153 | 4 | 201 | 466 | 156 | 415 | 1.63e-47 | 170 |
MS.gene067144.t1 | AT4G35620 | 42.672 | 232 | 125 | 4 | 201 | 431 | 156 | 380 | 6.28e-46 | 164 |
MS.gene067144.t1 | AT5G06150 | 42.045 | 176 | 99 | 3 | 193 | 367 | 158 | 331 | 4.67e-39 | 145 |
MS.gene067144.t1 | AT1G76310 | 45.029 | 171 | 91 | 3 | 199 | 367 | 159 | 328 | 9.31e-39 | 144 |
MS.gene067144.t1 | AT1G20590 | 43.312 | 157 | 83 | 2 | 275 | 431 | 63 | 213 | 3.91e-34 | 129 |
MS.gene067144.t1 | AT1G47210 | 49.219 | 128 | 61 | 2 | 179 | 304 | 67 | 192 | 3.57e-32 | 122 |
MS.gene067144.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 234 | 387 | 5.45e-22 | 99.0 |
MS.gene067144.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.08e-22 | 99.0 |
MS.gene067144.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.08e-22 | 99.0 |
MS.gene067144.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.08e-22 | 99.0 |
MS.gene067144.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.08e-22 | 99.0 |
MS.gene067144.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 6.36e-22 | 99.0 |
MS.gene067144.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 245 | 398 | 6.55e-22 | 99.0 |
MS.gene067144.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 245 | 398 | 6.55e-22 | 99.0 |
MS.gene067144.t1 | AT1G34460 | 34.091 | 176 | 93 | 4 | 193 | 367 | 248 | 401 | 8.30e-22 | 98.6 |
MS.gene067144.t1 | AT1G14750 | 34.969 | 163 | 96 | 4 | 247 | 405 | 384 | 540 | 6.52e-16 | 80.9 |
MS.gene067144.t1 | AT1G14750 | 34.969 | 163 | 96 | 4 | 247 | 405 | 384 | 540 | 8.47e-16 | 80.5 |
MS.gene067144.t1 | AT1G14750 | 34.969 | 163 | 96 | 4 | 247 | 405 | 216 | 372 | 9.17e-16 | 79.7 |
MS.gene067144.t1 | AT1G14750 | 34.969 | 163 | 95 | 5 | 247 | 405 | 216 | 371 | 1.51e-14 | 75.9 |
MS.gene067144.t1 | AT5G65420 | 25.957 | 235 | 157 | 8 | 182 | 403 | 5 | 235 | 8.98e-11 | 63.5 |
Find 94 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTTAAAGGATTCTCAAATT+TGG | 0.182649 | 3.1:+85670929 | MS.gene067144:CDS |
CAGATCAAGGGCAAAGGTTT+TGG | 0.191093 | 3.1:+85669412 | MS.gene067144:CDS |
TGGGATTTATACCTGAAAAT+TGG | 0.195568 | 3.1:-85669609 | None:intergenic |
CGAACTTTGTTGTATATATC+AGG | 0.212202 | 3.1:-85670964 | None:intergenic |
AACAGTGACTGCACCGGTTT+TGG | 0.269524 | 3.1:-85673840 | None:intergenic |
CTGCAACTTCTCCATGTAAT+TGG | 0.276568 | 3.1:-85671342 | None:intergenic |
TACATACCTGAGAAATGTTT+TGG | 0.301501 | 3.1:-85672322 | None:intergenic |
GAGTGGACGCTCTTCATCTT+TGG | 0.302032 | 3.1:-85669381 | None:intergenic |
TATTGAAATAAACCTTTGTT+TGG | 0.308273 | 3.1:-85670640 | None:intergenic |
TCTTGCTGAACTGGAATTCC+TGG | 0.315133 | 3.1:+85672806 | MS.gene067144:CDS |
ACCGGTGCAGTCACTGTTCC+AGG | 0.328369 | 3.1:+85673845 | MS.gene067144:CDS |
ACAGGTTCCTCTTGCTGAAC+TGG | 0.342894 | 3.1:+85672797 | MS.gene067144:intron |
TTCTCCATGTAATTGGTTGA+TGG | 0.359361 | 3.1:-85671335 | None:intergenic |
CACCATTGCTGCAGTAACTT+TGG | 0.388234 | 3.1:+85670501 | MS.gene067144:CDS |
TGCAAGTAACACCAAGCAAC+TGG | 0.415916 | 3.1:-85671794 | None:intergenic |
CAAAACCTTTGCCCTTGATC+TGG | 0.423251 | 3.1:-85669411 | None:intergenic |
AATAAACCTTTGTTTGGACT+TGG | 0.425078 | 3.1:-85670634 | None:intergenic |
TCTTCCAGTGCAAGAACAAC+TGG | 0.426769 | 3.1:-85673085 | None:intergenic |
ACAGTAAGGTAAAGAGTGTC+TGG | 0.432601 | 3.1:-85671720 | None:intergenic |
AAGAGCAACAGCTTCCAAAA+AGG | 0.433513 | 3.1:+85669463 | MS.gene067144:CDS |
TGAGTGGTTGAGGGTCCATC+TGG | 0.438657 | 3.1:-85672916 | None:intergenic |
TGCGTGGAATTCTGATTGAT+TGG | 0.439226 | 3.1:+85671384 | MS.gene067144:CDS |
ATATATGCAGACTACAACTC+TGG | 0.439974 | 3.1:+85673027 | MS.gene067144:intron |
GGCAAAACTGTCTCCAAAAC+CGG | 0.446811 | 3.1:+85673827 | MS.gene067144:CDS |
TAGCTCTGAAGCTTTGTAGT+TGG | 0.450188 | 3.1:-85673059 | None:intergenic |
AACATGGTCACTTATGTTGT+TGG | 0.450701 | 3.1:-85670551 | None:intergenic |
TATCGATGTCTACAAAGGTC+AGG | 0.459319 | 3.1:-85670903 | None:intergenic |
ATGGATGTTCTGAGTGGTTG+AGG | 0.460808 | 3.1:-85672926 | None:intergenic |
CATAAATTTACACTTGAGCC+TGG | 0.467011 | 3.1:-85673863 | None:intergenic |
CTGCTGTATTCCTTGCCAGA+TGG | 0.472091 | 3.1:+85672901 | MS.gene067144:CDS |
CCACAACCAAAACATTTCTC+AGG | 0.475913 | 3.1:+85672316 | MS.gene067144:CDS |
ATCAGAATTCCACGCATGCT+TGG | 0.476428 | 3.1:-85671377 | None:intergenic |
CACTCAGAATTACCAGATCA+AGG | 0.485115 | 3.1:+85669399 | MS.gene067144:CDS |
TTGTGCTGATGAAACTTCAA+TGG | 0.487200 | 3.1:-85670416 | None:intergenic |
GATCAATGAGGTTCACAGTA+AGG | 0.489451 | 3.1:-85671734 | None:intergenic |
TGCTTCATGTGACAGTTCAA+TGG | 0.489558 | 3.1:+85673801 | MS.gene067144:intron |
TGTAAGAAGATTGTGCTGCT+TGG | 0.497059 | 3.1:-85672438 | None:intergenic |
ATGTTCCTCACCGTAAAAGA+AGG | 0.498778 | 3.1:+85669525 | MS.gene067144:CDS |
AAAACCAGTTGTTCTTGCAC+TGG | 0.503437 | 3.1:+85673081 | MS.gene067144:CDS |
CCTCACCGTAAAAGAAGGGC+AGG | 0.504738 | 3.1:+85669530 | MS.gene067144:CDS |
GGTTTCTGAGGAATATAAGC+TGG | 0.509301 | 3.1:+85671695 | MS.gene067144:intron |
GAACTTTGTTGTATATATCA+GGG | 0.514973 | 3.1:-85670963 | None:intergenic |
AATTCTGATTGATTGGCTTG+TGG | 0.519075 | 3.1:+85671391 | MS.gene067144:CDS |
CATAAATATGATTTGTGAGA+AGG | 0.520200 | 3.1:+85670864 | MS.gene067144:CDS |
TGAAGTTTCATCAGCACAAG+AGG | 0.526624 | 3.1:+85670420 | MS.gene067144:CDS |
AGCATGGAGAGAACAACCTT+TGG | 0.528068 | 3.1:-85673122 | None:intergenic |
TTACTGTGAACCTCATTGAT+CGG | 0.529430 | 3.1:+85671736 | MS.gene067144:CDS |
TATATTTCTCACGTATAGCA+TGG | 0.531941 | 3.1:-85673138 | None:intergenic |
TGGATGTTCTGAGTGGTTGA+GGG | 0.532302 | 3.1:-85672925 | None:intergenic |
TCAACCACTCAGAACATCCA+TGG | 0.534173 | 3.1:+85672928 | MS.gene067144:CDS |
AAACACAGGCTCCAGTTGCT+TGG | 0.536048 | 3.1:+85671783 | MS.gene067144:CDS |
AGAATTGTCTACCATAAAGA+TGG | 0.537932 | 3.1:+85670465 | MS.gene067144:CDS |
GCAGAAGCAGCCACACGAGA+AGG | 0.540170 | 3.1:-85672882 | None:intergenic |
TTGGACATACAATGTTCAGT+TGG | 0.549012 | 3.1:-85670532 | None:intergenic |
GGACCCTCTTCGGAAAATGA+AGG | 0.550131 | 3.1:+85669437 | MS.gene067144:CDS |
ACCTTTGTTTGGACTTGGAG+AGG | 0.555698 | 3.1:-85670629 | None:intergenic |
AACCAAAGTTACTGCAGCAA+TGG | 0.556672 | 3.1:-85670503 | None:intergenic |
AAGACCATCAACCAATTACA+TGG | 0.561852 | 3.1:+85671331 | MS.gene067144:CDS |
TTGTGAGAAGGTAGGAGCCT+CGG | 0.564379 | 3.1:+85670876 | MS.gene067144:CDS |
CAAGTTTGATTCAGAAACAC+AGG | 0.567317 | 3.1:+85671769 | MS.gene067144:CDS |
ACAAGAGGATGTTAAAGAGA+AGG | 0.567620 | 3.1:+85670435 | MS.gene067144:CDS |
AGCAGCACAATCTTCTTACA+AGG | 0.568751 | 3.1:+85672441 | MS.gene067144:CDS |
GCTCTGCTAAATAATTTGCC+AGG | 0.570353 | 3.1:-85672824 | None:intergenic |
AACTTTGTTGTATATATCAG+GGG | 0.581055 | 3.1:-85670962 | None:intergenic |
TGTTTAACACGTTTATCATG+TGG | 0.581458 | 3.1:-85669584 | None:intergenic |
TGAGAAATATAAACATGAGA+AGG | 0.585853 | 3.1:+85673150 | MS.gene067144:CDS |
GCCTGGAACAGTGACTGCAC+CGG | 0.595943 | 3.1:-85673846 | None:intergenic |
GACCCTCTTCGGAAAATGAA+GGG | 0.596652 | 3.1:+85669438 | MS.gene067144:CDS |
GATCTGCAACTTAATACCAA+AGG | 0.597942 | 3.1:+85673106 | MS.gene067144:CDS |
ACAGTTTCTACCTTCTCGTG+TGG | 0.603003 | 3.1:+85672872 | MS.gene067144:CDS |
TCTGATTGATTGGCTTGTGG+AGG | 0.610856 | 3.1:+85671394 | MS.gene067144:CDS |
TACAAAGGTCAGGCGATCCG+AGG | 0.611523 | 3.1:-85670893 | None:intergenic |
TAATACATACACAAAAGAAG+AGG | 0.613454 | 3.1:+85672239 | MS.gene067144:CDS |
GGTTGAGGGTCCATCTGGCA+AGG | 0.616376 | 3.1:-85672911 | None:intergenic |
AATTACCAGATCAAGGGCAA+AGG | 0.620424 | 3.1:+85669406 | MS.gene067144:CDS |
TTGAGAGAAACCGATCAATG+AGG | 0.621952 | 3.1:-85671746 | None:intergenic |
AGGAATTCCAGTTCAGCAAG+AGG | 0.623808 | 3.1:-85672804 | None:intergenic |
CAGATAACTGAAAACGCAGA+AGG | 0.624641 | 3.1:-85672290 | None:intergenic |
ACTCAGAATTACCAGATCAA+GGG | 0.628344 | 3.1:+85669400 | MS.gene067144:CDS |
ATGCAAGAATGTGTGAACTC+TGG | 0.628364 | 3.1:+85670595 | MS.gene067144:CDS |
AAGCAAAATTCTTCCACTCG+AGG | 0.634099 | 3.1:-85672207 | None:intergenic |
CAACCACTCAGAACATCCAT+GGG | 0.636239 | 3.1:+85672929 | MS.gene067144:CDS |
ACATTCTTGCATTGAAAGTG+TGG | 0.640397 | 3.1:-85670584 | None:intergenic |
TGTTCCTCACCGTAAAAGAA+GGG | 0.641902 | 3.1:+85669526 | MS.gene067144:CDS |
AATATGATTTGTGAGAAGGT+AGG | 0.642690 | 3.1:+85670868 | MS.gene067144:CDS |
GATATTTCTCCAAGCATGCG+TGG | 0.654313 | 3.1:+85671368 | MS.gene067144:CDS |
CTTGATCTGGTAATTCTGAG+TGG | 0.660376 | 3.1:-85669398 | None:intergenic |
ACCTCTCCAAGTCCAAACAA+AGG | 0.667488 | 3.1:+85670628 | MS.gene067144:CDS |
ATACCCATGGATGTTCTGAG+TGG | 0.668616 | 3.1:-85672932 | None:intergenic |
AGAGATGTGTGCTCCTCGAG+TGG | 0.670751 | 3.1:+85672194 | MS.gene067144:CDS |
CATGTGACAGTTCAATGGTG+TGG | 0.678244 | 3.1:+85673806 | MS.gene067144:intron |
GTGTGGTGTCTGTCATAACA+TGG | 0.706964 | 3.1:-85670567 | None:intergenic |
CTCACCGTAAAAGAAGGGCA+GGG | 0.713304 | 3.1:+85669531 | MS.gene067144:CDS |
CAACAAAGTTCGAGTCACCG+AGG | 0.719869 | 3.1:+85670975 | MS.gene067144:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATATAAAAAAAGTTACT+AGG | + | chr3.1:85670751-85670770 | MS.gene067144:intron | 10.0% |
!!! | TAATGAAAATTTTATGTTTT+GGG | - | chr3.1:85670041-85670060 | None:intergenic | 10.0% |
!!! | TATAATTTAAAACATGAATT+TGG | - | chr3.1:85669644-85669663 | None:intergenic | 10.0% |
!! | GATTGTTTAATAATGAATTA+CGG | - | chr3.1:85671006-85671025 | None:intergenic | 15.0% |
!! | TATTTATATCTTCTAAACAA+AGG | - | chr3.1:85672982-85673001 | None:intergenic | 15.0% |
!!! | AATTGGTACATTTTATTTTA+TGG | - | chr3.1:85669935-85669954 | None:intergenic | 15.0% |
!!! | ACTTTTTTTATATTATCCAA+AGG | - | chr3.1:85670747-85670766 | None:intergenic | 15.0% |
!!! | CTTTTTTTATATTATCCAAA+GGG | - | chr3.1:85670746-85670765 | None:intergenic | 15.0% |
!!! | GTAATGAAAATTTTATGTTT+TGG | - | chr3.1:85670042-85670061 | None:intergenic | 15.0% |
!! | ATCAATATCACCATATAATT+AGG | + | chr3.1:85669663-85669682 | MS.gene067144:intron | 20.0% |
!! | TATGATAGAATAGAACATTA+TGG | + | chr3.1:85669746-85669765 | MS.gene067144:intron | 20.0% |
!! | TATTGAAATAAACCTTTGTT+TGG | - | chr3.1:85670643-85670662 | None:intergenic | 20.0% |
!! | TCTATTCTTAGTACAAAAAT+AGG | - | chr3.1:85671243-85671262 | None:intergenic | 20.0% |
!!! | AAAACATTGATGATAAGTTT+TGG | + | chr3.1:85671286-85671305 | MS.gene067144:intron | 20.0% |
!!! | AAATCTTTCTGATAGTTTTT+AGG | - | chr3.1:85669696-85669715 | None:intergenic | 20.0% |
!!! | AAGATTTGAAATTAATGAGT+TGG | + | chr3.1:85669709-85669728 | MS.gene067144:intron | 20.0% |
!!! | AATTTAACTTAGTATGTGTT+TGG | + | chr3.1:85672490-85672509 | MS.gene067144:intron | 20.0% |
!!! | ACTAGTATAAAACATGTTTT+AGG | + | chr3.1:85670680-85670699 | MS.gene067144:intron | 20.0% |
!!! | CATAGCTTTATTGAAAAAAA+AGG | + | chr3.1:85673749-85673768 | MS.gene067144:intron | 20.0% |
!!! | CTTTTTTTTCAATAAAGCTA+TGG | - | chr3.1:85673751-85673770 | None:intergenic | 20.0% |
!!! | GTAAGTACTATTTTTTGTAA+TGG | + | chr3.1:85671830-85671849 | MS.gene067144:intron | 20.0% |
!!! | TAAACTTTATCTTGTTATAC+AGG | + | chr3.1:85672779-85672798 | MS.gene067144:intron | 20.0% |
! | AAAAGAAGAGGTAGTAAAAA+TGG | + | chr3.1:85672251-85672270 | MS.gene067144:CDS | 25.0% |
! | AAATTGTAGAATCTCATCTT+AGG | + | chr3.1:85670119-85670138 | MS.gene067144:intron | 25.0% |
! | ACTATCATTTCCTAATGATA+TGG | - | chr3.1:85669832-85669851 | None:intergenic | 25.0% |
! | ACTTCAACAAACTGTAATTA+AGG | - | chr3.1:85671623-85671642 | None:intergenic | 25.0% |
! | AGAATTCTTTGATAAGGTTA+TGG | - | chr3.1:85671487-85671506 | None:intergenic | 25.0% |
! | AGACATCGATAAAAAGTTAA+AGG | + | chr3.1:85670915-85670934 | MS.gene067144:CDS | 25.0% |
! | AGTTAAAGGATTCTCAAATT+TGG | + | chr3.1:85670929-85670948 | MS.gene067144:CDS | 25.0% |
! | ATAGGATATATACAATGTGA+TGG | + | chr3.1:85671543-85671562 | MS.gene067144:intron | 25.0% |
! | CAAAAACATAGTTGAATGAT+AGG | + | chr3.1:85671525-85671544 | MS.gene067144:intron | 25.0% |
! | CTAAGTTAAATTGTAGATAG+TGG | - | chr3.1:85672482-85672501 | None:intergenic | 25.0% |
! | CTGTAAAATGGATAACTAAT+CGG | - | chr3.1:85670347-85670366 | None:intergenic | 25.0% |
! | GTACAAAAATAGGATTACTT+TGG | - | chr3.1:85671233-85671252 | None:intergenic | 25.0% |
! | TAAAATGTACCAATTGAACT+TGG | + | chr3.1:85669940-85669959 | MS.gene067144:intron | 25.0% |
! | TAATACATACACAAAAGAAG+AGG | + | chr3.1:85672239-85672258 | MS.gene067144:CDS | 25.0% |
! | TAGATGAGAATTCTTTGATA+AGG | - | chr3.1:85671493-85671512 | None:intergenic | 25.0% |
! | TCCAAATAGTGCTTATAAAT+AGG | + | chr3.1:85673453-85673472 | MS.gene067144:intron | 25.0% |
! | TCCTATTTATAAGCACTATT+TGG | - | chr3.1:85673457-85673476 | None:intergenic | 25.0% |
! | TGAGAAATATAAACATGAGA+AGG | + | chr3.1:85673150-85673169 | MS.gene067144:CDS | 25.0% |
! | TGTCAAAGATGCTTATAAAA+AGG | - | chr3.1:85673260-85673279 | None:intergenic | 25.0% |
! | TTGATCTATTATTGTCTTTC+AGG | + | chr3.1:85672407-85672426 | MS.gene067144:intron | 25.0% |
!! | AACTTTGTTGTATATATCAG+GGG | - | chr3.1:85670965-85670984 | None:intergenic | 25.0% |
!! | ATGAATTTGGTGACAAAATT+GGG | - | chr3.1:85669631-85669650 | None:intergenic | 25.0% |
!! | CATAAATATGATTTGTGAGA+AGG | + | chr3.1:85670864-85670883 | MS.gene067144:CDS | 25.0% |
!! | GAACTTTGTTGTATATATCA+GGG | - | chr3.1:85670966-85670985 | None:intergenic | 25.0% |
!! | TAAAGAGAAAAGTAGCATTT+TGG | - | chr3.1:85672017-85672036 | None:intergenic | 25.0% |
!! | TAATGAGTTGGACTAAAATA+TGG | + | chr3.1:85669721-85669740 | MS.gene067144:intron | 25.0% |
!! | TCTTTTTGAACTATGAACTA+AGG | + | chr3.1:85671908-85671927 | MS.gene067144:intron | 25.0% |
!! | TGTTAAACAATCCAATTTTC+AGG | + | chr3.1:85669598-85669617 | MS.gene067144:CDS | 25.0% |
!! | TTTTCAATAAAGCTATGGAT+AGG | - | chr3.1:85673746-85673765 | None:intergenic | 25.0% |
!!! | CAACTATGTTTTTGATTGAA+AGG | - | chr3.1:85671519-85671538 | None:intergenic | 25.0% |
!!! | TGTTTTTTCCCAATATCATT+CGG | + | chr3.1:85672128-85672147 | MS.gene067144:intron | 25.0% |
!!! | TTAGCTTTGTGTTTTTCTTT+TGG | - | chr3.1:85670384-85670403 | None:intergenic | 25.0% |
AACATTGGTCAACTGAAAAA+AGG | - | chr3.1:85673196-85673215 | None:intergenic | 30.0% | |
AAGAATAGAGCAGAATCATT+AGG | + | chr3.1:85671254-85671273 | MS.gene067144:intron | 30.0% | |
AAGATTGTCCAATAGTTAAG+AGG | + | chr3.1:85670196-85670215 | MS.gene067144:intron | 30.0% | |
AATAGATTTGCCTTCAAAGT+TGG | + | chr3.1:85669977-85669996 | MS.gene067144:intron | 30.0% | |
ACTATGAACTAAGGATATCT+AGG | + | chr3.1:85671917-85671936 | MS.gene067144:intron | 30.0% | |
AGAATTGTCTACCATAAAGA+TGG | + | chr3.1:85670465-85670484 | MS.gene067144:CDS | 30.0% | |
AGACAACATGACAGTAATTA+TGG | - | chr3.1:85670827-85670846 | None:intergenic | 30.0% | |
AGGTCTTCTTCCTAATTATA+TGG | - | chr3.1:85669676-85669695 | None:intergenic | 30.0% | |
ATAGATTTGCCTTCAAAGTT+GGG | + | chr3.1:85669978-85669997 | MS.gene067144:intron | 30.0% | |
ATCTTAGACCGAATGATATT+GGG | - | chr3.1:85672139-85672158 | None:intergenic | 30.0% | |
CAAAAGATGTTTCCTCTAAA+GGG | - | chr3.1:85673682-85673701 | None:intergenic | 30.0% | |
CACTCAATAATTGAGAATGT+TGG | - | chr3.1:85673528-85673547 | None:intergenic | 30.0% | |
GATTGATCTATCTAGGTAAT+TGG | + | chr3.1:85669882-85669901 | MS.gene067144:intron | 30.0% | |
GGTGAAATATCTTAGAAGTT+TGG | + | chr3.1:85670798-85670817 | MS.gene067144:intron | 30.0% | |
GGTTATAGTTGCATTTGAAA+TGG | + | chr3.1:85671592-85671611 | MS.gene067144:intron | 30.0% | |
GTTGTTATCACCATATCATT+AGG | + | chr3.1:85669819-85669838 | MS.gene067144:intron | 30.0% | |
TAACTATCACCAAATGCATT+CGG | - | chr3.1:85672075-85672094 | None:intergenic | 30.0% | |
TACAACTCTTTATGATGATC+AGG | + | chr3.1:85671571-85671590 | MS.gene067144:intron | 30.0% | |
TAGGAACAGAGATAGTATAT+AGG | + | chr3.1:85673472-85673491 | MS.gene067144:intron | 30.0% | |
TATATTTCTCACGTATAGCA+TGG | - | chr3.1:85673141-85673160 | None:intergenic | 30.0% | |
TCAATGTAAGCAAGTATTCT+AGG | + | chr3.1:85671133-85671152 | MS.gene067144:intron | 30.0% | |
TCATTTAATCCGAATGCATT+TGG | + | chr3.1:85672063-85672082 | MS.gene067144:intron | 30.0% | |
TGAAAGATGACTTACATTCA+GGG | + | chr3.1:85673417-85673436 | MS.gene067144:intron | 30.0% | |
TGACATTGCAATTTAGCATA+TGG | - | chr3.1:85670715-85670734 | None:intergenic | 30.0% | |
TGATAAGGTTATGGACAAAA+AGG | - | chr3.1:85671478-85671497 | None:intergenic | 30.0% | |
TGGGATTTATACCTGAAAAT+TGG | - | chr3.1:85669612-85669631 | None:intergenic | 30.0% | |
TGTTTAACACGTTTATCATG+TGG | - | chr3.1:85669587-85669606 | None:intergenic | 30.0% | |
TTGAAAGATGACTTACATTC+AGG | + | chr3.1:85673416-85673435 | MS.gene067144:intron | 30.0% | |
! | AATAAACCTTTGTTTGGACT+TGG | - | chr3.1:85670637-85670656 | None:intergenic | 30.0% |
! | AATATGATTTGTGAGAAGGT+AGG | + | chr3.1:85670868-85670887 | MS.gene067144:CDS | 30.0% |
! | CATGAATTTGGTGACAAAAT+TGG | - | chr3.1:85669632-85669651 | None:intergenic | 30.0% |
! | CGAACTTTGTTGTATATATC+AGG | - | chr3.1:85670967-85670986 | None:intergenic | 30.0% |
! | CTTTTTATCGATGTCTACAA+AGG | - | chr3.1:85670911-85670930 | None:intergenic | 30.0% |
! | TACATACCTGAGAAATGTTT+TGG | - | chr3.1:85672325-85672344 | None:intergenic | 30.0% |
! | TTTCTTTTGGTAAACTCCTT+TGG | - | chr3.1:85670371-85670390 | None:intergenic | 30.0% |
!! | AAGCTATAAATCCTAGCTTT+TGG | - | chr3.1:85672631-85672650 | None:intergenic | 30.0% |
!! | ATGGATTTTGACATGTTTGA+TGG | + | chr3.1:85672553-85672572 | MS.gene067144:intron | 30.0% |
!! | CGATTAGTTATCCATTTTAC+AGG | + | chr3.1:85670345-85670364 | MS.gene067144:intron | 30.0% |
!! | CTATGTTTTTGATTGAAAGG+CGG | - | chr3.1:85671516-85671535 | None:intergenic | 30.0% |
!! | GACTAGTGGATTTAAAACAT+TGG | - | chr3.1:85673211-85673230 | None:intergenic | 30.0% |
!! | TTTTGACTCTACCATCTTTA+TGG | - | chr3.1:85670479-85670498 | None:intergenic | 30.0% |
!!! | AAGCTTTTTTCAACTAAGTG+GGG | - | chr3.1:85669795-85669814 | None:intergenic | 30.0% |
!!! | ACTATTTTTTGTAATGGTCC+TGG | + | chr3.1:85671836-85671855 | MS.gene067144:intron | 30.0% |
!!! | CAAGCTTTTTTCAACTAAGT+GGG | - | chr3.1:85669796-85669815 | None:intergenic | 30.0% |
AACATGGTCACTTATGTTGT+TGG | - | chr3.1:85670554-85670573 | None:intergenic | 35.0% | |
AAGACCATCAACCAATTACA+TGG | + | chr3.1:85671331-85671350 | MS.gene067144:CDS | 35.0% | |
AATGAATTACGGACAAACCT+CGG | - | chr3.1:85670995-85671014 | None:intergenic | 35.0% | |
AATGTCATAAGATTGCCCTT+TGG | + | chr3.1:85670728-85670747 | MS.gene067144:intron | 35.0% | |
ACAAGAGGATGTTAAAGAGA+AGG | + | chr3.1:85670435-85670454 | MS.gene067144:CDS | 35.0% | |
ACATGCAGATTGATCTATCT+AGG | + | chr3.1:85669875-85669894 | MS.gene067144:intron | 35.0% | |
ACATTCTTGCATTGAAAGTG+TGG | - | chr3.1:85670587-85670606 | None:intergenic | 35.0% | |
ACTCAGAATTACCAGATCAA+GGG | + | chr3.1:85669400-85669419 | MS.gene067144:CDS | 35.0% | |
ACTTACATACCCAACTTTGA+AGG | - | chr3.1:85669990-85670009 | None:intergenic | 35.0% | |
AGAATTCTAACTCTGAGCAA+CGG | - | chr3.1:85671875-85671894 | None:intergenic | 35.0% | |
AGAGGTAGTAAAAATGGAGA+AGG | + | chr3.1:85672257-85672276 | MS.gene067144:CDS | 35.0% | |
AGTGATTCTAACCAAAAGCT+AGG | + | chr3.1:85672617-85672636 | MS.gene067144:intron | 35.0% | |
AGTTGTATTGTACCCTTTAG+AGG | + | chr3.1:85673667-85673686 | MS.gene067144:intron | 35.0% | |
ATATATGCAGACTACAACTC+TGG | + | chr3.1:85673027-85673046 | MS.gene067144:intron | 35.0% | |
ATTATGGCGTAATTTGATCC+TGG | + | chr3.1:85669762-85669781 | MS.gene067144:intron | 35.0% | |
CAAGTTTGATTCAGAAACAC+AGG | + | chr3.1:85671769-85671788 | MS.gene067144:CDS | 35.0% | |
CATCTTAGACCGAATGATAT+TGG | - | chr3.1:85672140-85672159 | None:intergenic | 35.0% | |
CCACTTAGTTGAAAAAAGCT+TGG | + | chr3.1:85669794-85669813 | MS.gene067144:intron | 35.0% | |
CTAACCTACTCTCTTTACTA+GGG | - | chr3.1:85670172-85670191 | None:intergenic | 35.0% | |
GATCTGCAACTTAATACCAA+AGG | + | chr3.1:85673106-85673125 | MS.gene067144:CDS | 35.0% | |
GCAAAAGATGTTTCCTCTAA+AGG | - | chr3.1:85673683-85673702 | None:intergenic | 35.0% | |
TAGTCAACATTTCATACCCA+TGG | - | chr3.1:85672948-85672967 | None:intergenic | 35.0% | |
TATTCCTCAGAAACCTGAAA+AGG | - | chr3.1:85671690-85671709 | None:intergenic | 35.0% | |
TCAGAAACCTGAAAAGGAAT+AGG | - | chr3.1:85671684-85671703 | None:intergenic | 35.0% | |
TCTAACCTACTCTCTTTACT+AGG | - | chr3.1:85670173-85670192 | None:intergenic | 35.0% | |
TCTCTTCACCTCTTAACTAT+TGG | - | chr3.1:85670207-85670226 | None:intergenic | 35.0% | |
TCTGATTGAGGTTCATAAAC+CGG | + | chr3.1:85673704-85673723 | MS.gene067144:intron | 35.0% | |
TGCAAAATGAAATATGCTCC+TGG | - | chr3.1:85671163-85671182 | None:intergenic | 35.0% | |
TTACTGTGAACCTCATTGAT+CGG | + | chr3.1:85671736-85671755 | MS.gene067144:CDS | 35.0% | |
TTCTCCATGTAATTGGTTGA+TGG | - | chr3.1:85671338-85671357 | None:intergenic | 35.0% | |
TTGGACATACAATGTTCAGT+TGG | - | chr3.1:85670535-85670554 | None:intergenic | 35.0% | |
TTGGTTAGAATCACTTCTTG+AGG | - | chr3.1:85672612-85672631 | None:intergenic | 35.0% | |
TTGTAGAATCTCATCTTAGG+TGG | + | chr3.1:85670122-85670141 | MS.gene067144:intron | 35.0% | |
! | ACATCTTTTGCATCTGATTG+AGG | + | chr3.1:85673692-85673711 | MS.gene067144:intron | 35.0% |
! | AGATGCACTTCTTTTCTTCA+TGG | + | chr3.1:85672155-85672174 | MS.gene067144:intron | 35.0% |
! | CTCAGAAGAAACAACCTTTT+TGG | - | chr3.1:85669480-85669499 | None:intergenic | 35.0% |
! | TCTAAAGGGTACAATACAAC+TGG | - | chr3.1:85673668-85673687 | None:intergenic | 35.0% |
! | TTACCATCAAGCTTTTGTTG+TGG | + | chr3.1:85671643-85671662 | MS.gene067144:intron | 35.0% |
! | TTAGTATGTGTTTGGTTTCG+TGG | + | chr3.1:85672498-85672517 | MS.gene067144:intron | 35.0% |
! | TTATCCATTTTACAGGCCAA+AGG | + | chr3.1:85670352-85670371 | MS.gene067144:intron | 35.0% |
! | TTGTGCTGATGAAACTTCAA+TGG | - | chr3.1:85670419-85670438 | None:intergenic | 35.0% |
!! | AAGTGGTTCTAGACACAAAA+TGG | + | chr3.1:85672534-85672553 | MS.gene067144:intron | 35.0% |
!! | AATTCTGATTGATTGGCTTG+TGG | + | chr3.1:85671391-85671410 | MS.gene067144:CDS | 35.0% |
!! | AGGACAGCATATTATTTTGC+CGG | - | chr3.1:85673726-85673745 | None:intergenic | 35.0% |
!! | CTGGATTATTTTATGCTGAC+AGG | + | chr3.1:85672736-85672755 | MS.gene067144:intron | 35.0% |
!! | TTTGTGTCTAGAACCACTTT+TGG | - | chr3.1:85672533-85672552 | None:intergenic | 35.0% |
!! | TTTTGTTGTGGCTTTGCTAA+AGG | + | chr3.1:85671655-85671674 | MS.gene067144:intron | 35.0% |
!!! | CCAAGCTTTTTTCAACTAAG+TGG | - | chr3.1:85669797-85669816 | None:intergenic | 35.0% |
!!! | CTGAGAAATGTTTTGGTTGT+GGG | - | chr3.1:85672318-85672337 | None:intergenic | 35.0% |
!!! | TATTCCTTTTCAGGTTTCTG+AGG | + | chr3.1:85671683-85671702 | MS.gene067144:intron | 35.0% |
!!! | TTTTTTCAACTAAGTGGGGT+CGG | - | chr3.1:85669791-85669810 | None:intergenic | 35.0% |
AAAACCAGTTGTTCTTGCAC+TGG | + | chr3.1:85673081-85673100 | MS.gene067144:CDS | 40.0% | |
AACCAAAGTTACTGCAGCAA+TGG | - | chr3.1:85670506-85670525 | None:intergenic | 40.0% | |
AACGGGAACTTATGTTAACC+AGG | - | chr3.1:85671857-85671876 | None:intergenic | 40.0% | |
AACTCCTTTGGCCTGTAAAA+TGG | - | chr3.1:85670359-85670378 | None:intergenic | 40.0% | |
AAGAGCAACAGCTTCCAAAA+AGG | + | chr3.1:85669463-85669482 | MS.gene067144:CDS | 40.0% | |
AAGCAAAATTCTTCCACTCG+AGG | - | chr3.1:85672210-85672229 | None:intergenic | 40.0% | |
AAGCCACAACAAAAGCTTGA+TGG | - | chr3.1:85671649-85671668 | None:intergenic | 40.0% | |
AAGCCACTAACTCACTAGAA+AGG | + | chr3.1:85670777-85670796 | MS.gene067144:intron | 40.0% | |
AAGTCAGCTGAAATTGCTAG+AGG | + | chr3.1:85670006-85670025 | MS.gene067144:intron | 40.0% | |
AATTACCAGATCAAGGGCAA+AGG | + | chr3.1:85669406-85669425 | MS.gene067144:CDS | 40.0% | |
ACAGTAAACTGAGGATCGAA+AGG | - | chr3.1:85671976-85671995 | None:intergenic | 40.0% | |
AGCAGCACAATCTTCTTACA+AGG | + | chr3.1:85672441-85672460 | MS.gene067144:CDS | 40.0% | |
AGTCAGCTGAAATTGCTAGA+GGG | + | chr3.1:85670007-85670026 | MS.gene067144:intron | 40.0% | |
ATCATCTCCACAGTAAACTG+AGG | - | chr3.1:85671985-85672004 | None:intergenic | 40.0% | |
ATGCAAGAATGTGTGAACTC+TGG | + | chr3.1:85670595-85670614 | MS.gene067144:CDS | 40.0% | |
ATGTTCCTCACCGTAAAAGA+AGG | + | chr3.1:85669525-85669544 | MS.gene067144:CDS | 40.0% | |
CACTCAGAATTACCAGATCA+AGG | + | chr3.1:85669399-85669418 | MS.gene067144:CDS | 40.0% | |
CACTGAAAATGCTACTCCAT+CGG | + | chr3.1:85673232-85673251 | MS.gene067144:intron | 40.0% | |
CAGATAACTGAAAACGCAGA+AGG | - | chr3.1:85672293-85672312 | None:intergenic | 40.0% | |
CATTGCAAAATCAAACACGC+TGG | + | chr3.1:85672717-85672736 | MS.gene067144:intron | 40.0% | |
CCACAACCAAAACATTTCTC+AGG | + | chr3.1:85672316-85672335 | MS.gene067144:CDS | 40.0% | |
CTGCAACTTCTCCATGTAAT+TGG | - | chr3.1:85671345-85671364 | None:intergenic | 40.0% | |
CTTGATCTGGTAATTCTGAG+TGG | - | chr3.1:85669401-85669420 | None:intergenic | 40.0% | |
GAATTCTAACTCTGAGCAAC+GGG | - | chr3.1:85671874-85671893 | None:intergenic | 40.0% | |
GATCAATGAGGTTCACAGTA+AGG | - | chr3.1:85671737-85671756 | None:intergenic | 40.0% | |
GTGGTAGAGATAACCAAAAG+TGG | + | chr3.1:85672517-85672536 | MS.gene067144:intron | 40.0% | |
TATCGATGTCTACAAAGGTC+AGG | - | chr3.1:85670906-85670925 | None:intergenic | 40.0% | |
TGAAGTTTCATCAGCACAAG+AGG | + | chr3.1:85670420-85670439 | MS.gene067144:CDS | 40.0% | |
TGCGTGGAATTCTGATTGAT+TGG | + | chr3.1:85671384-85671403 | MS.gene067144:CDS | 40.0% | |
TGCTTCATGTGACAGTTCAA+TGG | + | chr3.1:85673801-85673820 | MS.gene067144:intron | 40.0% | |
TGTTCCTCACCGTAAAAGAA+GGG | + | chr3.1:85669526-85669545 | MS.gene067144:CDS | 40.0% | |
TTGAGAGAAACCGATCAATG+AGG | - | chr3.1:85671749-85671768 | None:intergenic | 40.0% | |
TTTCGATCCTCAGTTTACTG+TGG | + | chr3.1:85671975-85671994 | MS.gene067144:intron | 40.0% | |
TTTGCTCGACCAAGTTCAAT+TGG | - | chr3.1:85669952-85669971 | None:intergenic | 40.0% | |
! | AGATCAAGGGCAAAGGTTTT+GGG | + | chr3.1:85669413-85669432 | MS.gene067144:CDS | 40.0% |
! | AGCATTTTCAGTGTGACTAG+TGG | - | chr3.1:85673225-85673244 | None:intergenic | 40.0% |
! | GCTCTGCTAAATAATTTGCC+AGG | - | chr3.1:85672827-85672846 | None:intergenic | 40.0% |
! | GGTTTCTGAGGAATATAAGC+TGG | + | chr3.1:85671695-85671714 | MS.gene067144:intron | 40.0% |
! | TCACCTTTCTAGTGAGTTAG+TGG | - | chr3.1:85670783-85670802 | None:intergenic | 40.0% |
! | TGTAAGAAGATTGTGCTGCT+TGG | - | chr3.1:85672441-85672460 | None:intergenic | 40.0% |
! | TTCCCTTCATTTTCCGAAGA+GGG | - | chr3.1:85669443-85669462 | None:intergenic | 40.0% |
! | TTTCCCTTCATTTTCCGAAG+AGG | - | chr3.1:85669444-85669463 | None:intergenic | 40.0% |
!! | AAGGTGTCCTATTCCTTTTC+AGG | + | chr3.1:85671674-85671693 | MS.gene067144:intron | 40.0% |
!! | ACAGTAAGGTAAAGAGTGTC+TGG | - | chr3.1:85671723-85671742 | None:intergenic | 40.0% |
!! | TAGCTCTGAAGCTTTGTAGT+TGG | - | chr3.1:85673062-85673081 | None:intergenic | 40.0% |
!! | TGCTTATAAAAAGGCACCGA+TGG | - | chr3.1:85673251-85673270 | None:intergenic | 40.0% |
!! | TGGAGAAGTACTTGTACACA+CGG | - | chr3.1:85673648-85673667 | None:intergenic | 40.0% |
!!! | CCTGAGAAATGTTTTGGTTG+TGG | - | chr3.1:85672319-85672338 | None:intergenic | 40.0% |
ACAGTTTCTACCTTCTCGTG+TGG | + | chr3.1:85672872-85672891 | MS.gene067144:CDS | 45.0% | |
ACCTCTCCAAGTCCAAACAA+AGG | + | chr3.1:85670628-85670647 | MS.gene067144:CDS | 45.0% | |
AGCATGGAGAGAACAACCTT+TGG | - | chr3.1:85673125-85673144 | None:intergenic | 45.0% | |
AGGAATTCCAGTTCAGCAAG+AGG | - | chr3.1:85672807-85672826 | None:intergenic | 45.0% | |
ATCAGAATTCCACGCATGCT+TGG | - | chr3.1:85671380-85671399 | None:intergenic | 45.0% | |
CAAAACCTTTGCCCTTGATC+TGG | - | chr3.1:85669414-85669433 | None:intergenic | 45.0% | |
CAACCACTCAGAACATCCAT+GGG | + | chr3.1:85672929-85672948 | MS.gene067144:CDS | 45.0% | |
CACCATTGCTGCAGTAACTT+TGG | + | chr3.1:85670501-85670520 | MS.gene067144:CDS | 45.0% | |
CATGTGACAGTTCAATGGTG+TGG | + | chr3.1:85673806-85673825 | MS.gene067144:intron | 45.0% | |
GACCCTCTTCGGAAAATGAA+GGG | + | chr3.1:85669438-85669457 | MS.gene067144:CDS | 45.0% | |
GAGACCCTAGTAAAGAGAGT+AGG | + | chr3.1:85670165-85670184 | MS.gene067144:intron | 45.0% | |
GATATTTCTCCAAGCATGCG+TGG | + | chr3.1:85671368-85671387 | MS.gene067144:CDS | 45.0% | |
GGCAAAACTGTCTCCAAAAC+CGG | + | chr3.1:85673827-85673846 | MS.gene067144:CDS | 45.0% | |
GTCAGCTGAAATTGCTAGAG+GGG | + | chr3.1:85670008-85670027 | MS.gene067144:intron | 45.0% | |
GTGTGGTGTCTGTCATAACA+TGG | - | chr3.1:85670570-85670589 | None:intergenic | 45.0% | |
TCAACCACTCAGAACATCCA+TGG | + | chr3.1:85672928-85672947 | MS.gene067144:CDS | 45.0% | |
TCTTCCAGTGCAAGAACAAC+TGG | - | chr3.1:85673088-85673107 | None:intergenic | 45.0% | |
TCTTGCTGAACTGGAATTCC+TGG | + | chr3.1:85672806-85672825 | MS.gene067144:CDS | 45.0% | |
TGCAAGTAACACCAAGCAAC+TGG | - | chr3.1:85671797-85671816 | None:intergenic | 45.0% | |
TTAGGTGGTAGAGACATGTG+TGG | + | chr3.1:85670137-85670156 | MS.gene067144:intron | 45.0% | |
! | ACCTTTGTTTGGACTTGGAG+AGG | - | chr3.1:85670632-85670651 | None:intergenic | 45.0% |
! | ATACCCATGGATGTTCTGAG+TGG | - | chr3.1:85672935-85672954 | None:intergenic | 45.0% |
! | ATGGATGTTCTGAGTGGTTG+AGG | - | chr3.1:85672929-85672948 | None:intergenic | 45.0% |
! | CAGATCAAGGGCAAAGGTTT+TGG | + | chr3.1:85669412-85669431 | MS.gene067144:CDS | 45.0% |
! | CTTTTACGGTGAGGAACATC+AGG | - | chr3.1:85669524-85669543 | None:intergenic | 45.0% |
! | TAAGCCCTGCCCTTCTTTTA+CGG | - | chr3.1:85669538-85669557 | None:intergenic | 45.0% |
! | TGGATGTTCTGAGTGGTTGA+GGG | - | chr3.1:85672928-85672947 | None:intergenic | 45.0% |
!! | GCAAGTATTCTAGGATAGCC+AGG | + | chr3.1:85671142-85671161 | MS.gene067144:intron | 45.0% |
!! | TCTGATTGATTGGCTTGTGG+AGG | + | chr3.1:85671394-85671413 | MS.gene067144:CDS | 45.0% |
!! | ATTATTATTACTTTATAATA+GGG | + | chr3.1:85671086-85671105 | MS.gene067144:intron | 5.0% |
!! | TATTATTATTACTTTATAAT+AGG | + | chr3.1:85671085-85671104 | MS.gene067144:intron | 5.0% |
AAACACAGGCTCCAGTTGCT+TGG | + | chr3.1:85671783-85671802 | MS.gene067144:CDS | 50.0% | |
ACAGGTTCCTCTTGCTGAAC+TGG | + | chr3.1:85672797-85672816 | MS.gene067144:intron | 50.0% | |
CAACAAAGTTCGAGTCACCG+AGG | + | chr3.1:85670975-85670994 | MS.gene067144:CDS | 50.0% | |
CTCACCGTAAAAGAAGGGCA+GGG | + | chr3.1:85669531-85669550 | MS.gene067144:CDS | 50.0% | |
CTGCTGTATTCCTTGCCAGA+TGG | + | chr3.1:85672901-85672920 | MS.gene067144:CDS | 50.0% | |
GAGTGGACGCTCTTCATCTT+TGG | - | chr3.1:85669384-85669403 | None:intergenic | 50.0% | |
GGACCCTCTTCGGAAAATGA+AGG | + | chr3.1:85669437-85669456 | MS.gene067144:CDS | 50.0% | |
TTGTGAGAAGGTAGGAGCCT+CGG | + | chr3.1:85670876-85670895 | MS.gene067144:CDS | 50.0% | |
!!! | AACAGTGACTGCACCGGTTT+TGG | - | chr3.1:85673843-85673862 | None:intergenic | 50.0% |
!!! | TCAAGGGCAAAGGTTTTGGG+AGG | + | chr3.1:85669416-85669435 | MS.gene067144:CDS | 50.0% |
AGAGATGTGTGCTCCTCGAG+TGG | + | chr3.1:85672194-85672213 | MS.gene067144:CDS | 55.0% | |
CCTCACCGTAAAAGAAGGGC+AGG | + | chr3.1:85669530-85669549 | MS.gene067144:CDS | 55.0% | |
GCTTGTGGAGGTCAGTCTTG+TGG | + | chr3.1:85671406-85671425 | MS.gene067144:intron | 55.0% | |
TACAAAGGTCAGGCGATCCG+AGG | - | chr3.1:85670896-85670915 | None:intergenic | 55.0% | |
TGAGTGGTTGAGGGTCCATC+TGG | - | chr3.1:85672919-85672938 | None:intergenic | 55.0% | |
! | CCTGCCCTTCTTTTACGGTG+AGG | - | chr3.1:85669533-85669552 | None:intergenic | 55.0% |
! | GGAGGTCAGTCTTGTGGCAT+TGG | + | chr3.1:85671412-85671431 | MS.gene067144:intron | 55.0% |
!!! | GGTTTTGGGAGGACCCTCTT+CGG | + | chr3.1:85669427-85669446 | MS.gene067144:CDS | 55.0% |
ACCGGTGCAGTCACTGTTCC+AGG | + | chr3.1:85673845-85673864 | MS.gene067144:CDS | 60.0% | |
ACTAAGTGGGGTCGGCTACC+AGG | - | chr3.1:85669783-85669802 | None:intergenic | 60.0% | |
GCAGAAGCAGCCACACGAGA+AGG | - | chr3.1:85672885-85672904 | None:intergenic | 60.0% | |
GCCTGGAACAGTGACTGCAC+CGG | - | chr3.1:85673849-85673868 | None:intergenic | 60.0% | |
GGTTGAGGGTCCATCTGGCA+AGG | - | chr3.1:85672914-85672933 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 85669353 | 85673878 | 85669353 | ID=MS.gene067144 |
chr3.1 | mRNA | 85669353 | 85673878 | 85669353 | ID=MS.gene067144.t1;Parent=MS.gene067144 |
chr3.1 | exon | 85669353 | 85669619 | 85669353 | ID=MS.gene067144.t1.exon1;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85669353 | 85669619 | 85669353 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
chr3.1 | exon | 85670367 | 85670649 | 85670367 | ID=MS.gene067144.t1.exon2;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85670367 | 85670649 | 85670367 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
chr3.1 | exon | 85670863 | 85670996 | 85670863 | ID=MS.gene067144.t1.exon3;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85670863 | 85670996 | 85670863 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
chr3.1 | exon | 85671323 | 85671415 | 85671323 | ID=MS.gene067144.t1.exon4;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85671323 | 85671415 | 85671323 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
chr3.1 | exon | 85671696 | 85671829 | 85671696 | ID=MS.gene067144.t1.exon5;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85671696 | 85671829 | 85671696 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
chr3.1 | exon | 85672185 | 85672337 | 85672185 | ID=MS.gene067144.t1.exon6;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85672185 | 85672337 | 85672185 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
chr3.1 | exon | 85672429 | 85672462 | 85672429 | ID=MS.gene067144.t1.exon7;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85672429 | 85672462 | 85672429 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
chr3.1 | exon | 85672801 | 85672950 | 85672801 | ID=MS.gene067144.t1.exon8;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85672801 | 85672950 | 85672801 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
chr3.1 | exon | 85673037 | 85673171 | 85673037 | ID=MS.gene067144.t1.exon9;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85673037 | 85673171 | 85673037 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
chr3.1 | exon | 85673816 | 85673878 | 85673816 | ID=MS.gene067144.t1.exon10;Parent=MS.gene067144.t1 |
chr3.1 | CDS | 85673816 | 85673878 | 85673816 | ID=cds.MS.gene067144.t1;Parent=MS.gene067144.t1 |
Gene Sequence |
Protein sequence |