AlfalfaGEDB | MS.gene71482

M. sativa cultivar XinJiangDaYe / MS.gene71482

KEGG: K06627
GO: GO:0005575 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0110165
PFAM: PF00134.26 PF02984.22

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71482.t1	RHN76880.1	95.7	418	17	1	1	418	1	417	3.70E-218	767.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71482.t1	Q147G5	52.0	427	170	7	9	418	26	434	9.7e-103	375.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71482.t1	G7I6A9	95.7	418	17	1	1	418	6	422	2.6e-218	767.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049609	MS.gene71482	0.804481	2.12E-49	-1.69E-46
MS.gene050772	MS.gene71482	0.803236	3.84E-49	-1.69E-46
MS.gene051255	MS.gene71482	0.815643	8.32E-52	-1.69E-46
MS.gene051387	MS.gene71482	0.800314	1.53E-48	-1.69E-46
MS.gene051694	MS.gene71482	0.813385	2.63E-51	-1.69E-46
MS.gene051858	MS.gene71482	0.815854	7.47E-52	-1.69E-46
MS.gene053436	MS.gene71482	0.800146	1.65E-48	-1.69E-46
MS.gene056452	MS.gene71482	0.834038	3.77E-56	-1.69E-46
MS.gene056942	MS.gene71482	0.80606	9.88E-50	-1.69E-46
MS.gene059536	MS.gene71482	0.802561	5.29E-49	-1.69E-46
MS.gene059902	MS.gene71482	0.822808	1.94E-53	-1.69E-46
MS.gene060482	MS.gene71482	0.805125	1.55E-49	-1.69E-46
MS.gene060837	MS.gene71482	0.800768	1.23E-48	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene67884	MS.gene71482	PPI
MS.gene71482	MS.gene007485	PPI
MS.gene36273	MS.gene71482	PPI
MS.gene68361	MS.gene71482	PPI
MS.gene35086	MS.gene71482	PPI
MS.gene00478	MS.gene71482	PPI
MS.gene64859	MS.gene71482	PPI
MS.gene67555	MS.gene71482	PPI
MS.gene71482	MS.gene028366	PPI
MS.gene71482	MS.gene24450	PPI
MS.gene22482	MS.gene71482	PPI
MS.gene061932	MS.gene71482	PPI
MS.gene065314	MS.gene71482	PPI
MS.gene71482	MS.gene62819	PPI
MS.gene011448	MS.gene71482	PPI
MS.gene007486	MS.gene71482	PPI
MS.gene71482	MS.gene044085	PPI
MS.gene89090	MS.gene71482	PPI
MS.gene28739	MS.gene71482	PPI
MS.gene55900	MS.gene71482	PPI
MS.gene71482	MS.gene033401	PPI
MS.gene71482	MS.gene71260	PPI
MS.gene00474	MS.gene71482	PPI
MS.gene71482	MS.gene37226	PPI
MS.gene36424	MS.gene71482	PPI
MS.gene65301	MS.gene71482	PPI
MS.gene007487	MS.gene71482	PPI
MS.gene71482	MS.gene09785	PPI
MS.gene018518	MS.gene71482	PPI
MS.gene71482	MS.gene00063	PPI
MS.gene36271	MS.gene71482	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71482.t1	MTR_1g011470	95.694	418	17	1	1	418	6	422	0.0	827
MS.gene71482.t1	MTR_3g107970	58.696	460	138	6	9	418	17	474	0.0	525
MS.gene71482.t1	MTR_2g102550	46.296	432	204	6	3	418	10	429	9.80e-118	350
MS.gene71482.t1	MTR_2g102520	59.727	293	115	3	129	418	187	479	5.88e-116	347
MS.gene71482.t1	MTR_3g088415	51.292	271	132	0	138	408	221	491	2.51e-97	300
MS.gene71482.t1	MTR_3g088405	49.818	275	136	1	141	413	227	501	6.03e-94	291
MS.gene71482.t1	MTR_1g018680	47.887	284	145	2	134	415	68	350	1.59e-88	273
MS.gene71482.t1	MTR_3g102510	47.860	257	134	0	157	413	74	330	6.06e-84	260
MS.gene71482.t1	MTR_3g102530	46.691	272	143	1	144	413	71	342	1.12e-81	255
MS.gene71482.t1	MTR_3g088415	52.727	220	104	0	138	357	221	440	1.36e-80	255
MS.gene71482.t1	MTR_3g102520	45.221	272	147	1	144	413	78	349	2.13e-79	250
MS.gene71482.t1	MTR_3g102560	48.485	264	129	4	150	413	61	317	6.34e-73	231
MS.gene71482.t1	MTR_3g102540	47.059	255	127	4	161	413	13	261	2.17e-68	218
MS.gene71482.t1	MTR_3g088415	54.070	172	79	0	138	309	221	392	3.42e-63	209
MS.gene71482.t1	MTR_5g023790	40.441	272	154	4	141	411	155	419	3.64e-60	201
MS.gene71482.t1	MTR_7g089080	42.125	273	153	5	141	411	182	451	1.01e-58	207
MS.gene71482.t1	MTR_5g088980	41.328	271	150	6	143	411	150	413	3.92e-58	196
MS.gene71482.t1	MTR_8g074000	39.350	277	156	6	138	411	156	423	9.33e-58	195
MS.gene71482.t1	MTR_5g023790	43.777	233	123	4	141	372	155	380	5.72e-57	192
MS.gene71482.t1	MTR_5g023790	44.379	169	92	2	141	308	155	322	2.85e-41	150
MS.gene71482.t1	MTR_3g060770	34.298	242	143	9	154	388	29	261	1.50e-29	116
MS.gene71482.t1	MTR_3g061680	33.891	239	144	8	139	372	4	233	9.56e-28	111
MS.gene71482.t1	MTR_3g060820	31.765	255	160	6	139	388	4	249	7.81e-27	108
MS.gene71482.t1	MTR_3g060410	35.437	206	122	6	190	388	135	336	9.54e-27	110
MS.gene71482.t1	MTR_3g060400	29.811	265	157	8	154	398	25	280	9.93e-26	105
MS.gene71482.t1	MTR_3g460990	29.811	265	157	8	154	398	25	280	9.93e-26	105
MS.gene71482.t1	MTR_1g032850	37.222	180	97	5	177	352	364	531	3.98e-20	92.8
MS.gene71482.t1	MTR_5g044040	46.753	77	41	0	212	288	7	83	5.93e-19	82.8
MS.gene71482.t1	MTR_5g011900	29.932	147	102	1	183	329	95	240	2.06e-15	75.9
MS.gene71482.t1	MTR_6g045270	29.461	241	144	9	149	382	38	259	3.03e-15	76.6
MS.gene71482.t1	MTR_3g100710	27.933	179	124	3	168	341	73	251	1.31e-14	75.1
MS.gene71482.t1	MTR_4g080990	26.257	179	127	3	168	341	68	246	3.69e-13	70.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene71482.t1	AT5G11300	51.878	426	172	6	9	418	26	434	2.22e-138	403
MS.gene71482.t1	AT5G25380	50.000	422	195	7	8	418	25	441	1.26e-127	376
MS.gene71482.t1	AT5G25380	49.535	430	179	7	8	418	25	435	5.40e-127	374
MS.gene71482.t1	AT5G25380	49.535	430	179	7	8	418	25	435	5.40e-127	374
MS.gene71482.t1	AT1G80370	48.139	403	207	1	10	410	48	450	9.20e-125	369
MS.gene71482.t1	AT5G25380	49.395	413	172	6	8	402	25	418	2.99e-122	361
MS.gene71482.t1	AT1G15570	44.420	457	208	8	1	418	1	450	5.34e-119	354
MS.gene71482.t1	AT5G11300	49.725	364	151	5	9	357	26	372	1.54e-108	326
MS.gene71482.t1	AT1G44110	52.060	267	128	0	141	407	178	444	2.08e-98	301
MS.gene71482.t1	AT5G43080	50.554	271	134	0	143	413	73	343	1.72e-96	293
MS.gene71482.t1	AT1G47210	50.916	273	132	1	143	413	88	360	2.33e-94	288
MS.gene71482.t1	AT5G43080	50.554	271	129	1	143	413	73	338	2.69e-94	287
MS.gene71482.t1	AT1G77390	40.759	395	212	5	33	407	36	428	4.26e-92	285
MS.gene71482.t1	AT1G47230	48.913	276	135	2	142	413	80	353	4.51e-90	277
MS.gene71482.t1	AT1G47230	48.736	277	135	3	142	413	80	354	2.76e-88	273
MS.gene71482.t1	AT1G47220	49.815	271	130	2	143	409	42	310	1.49e-84	261
MS.gene71482.t1	AT1G76310	40.925	281	157	5	133	411	152	425	4.93e-62	206
MS.gene71482.t1	AT1G20610	39.706	272	156	4	141	411	160	424	1.63e-59	200
MS.gene71482.t1	AT1G76310	43.802	242	127	5	133	372	152	386	1.30e-57	194
MS.gene71482.t1	AT5G06150	42.279	272	148	5	141	411	165	428	3.35e-56	192
MS.gene71482.t1	AT1G76310	37.217	309	157	6	133	411	152	453	6.83e-56	191
MS.gene71482.t1	AT2G26760	40.672	268	148	7	135	398	105	365	3.80e-54	184
MS.gene71482.t1	AT3G11520	42.353	255	139	4	157	411	159	405	4.89e-53	182
MS.gene71482.t1	AT2G17620	36.056	355	193	9	55	407	92	414	4.62e-52	180
MS.gene71482.t1	AT4G37490	39.716	282	147	8	141	411	148	417	2.15e-51	178
MS.gene71482.t1	AT3G11520	45.291	223	114	4	157	379	159	373	9.56e-51	176
MS.gene71482.t1	AT4G35620	40.221	271	148	7	141	407	155	415	3.39e-49	172
MS.gene71482.t1	AT1G16330	37.647	255	152	3	157	411	395	642	7.64e-48	173
MS.gene71482.t1	AT4G35620	42.797	236	121	7	141	372	155	380	7.09e-46	162
MS.gene71482.t1	AT1G76310	45.251	179	95	3	133	309	152	329	7.62e-44	156
MS.gene71482.t1	AT5G06150	45.294	170	90	3	141	309	165	332	6.70e-38	140
MS.gene71482.t1	AT1G20590	43.312	157	83	2	216	372	63	213	2.64e-36	134
MS.gene71482.t1	AT1G47210	50.467	107	47	2	143	245	88	192	2.74e-29	113
MS.gene71482.t1	AT1G34460	36.095	169	85	4	141	308	241	387	1.47e-20	94.0
MS.gene71482.t1	AT1G34460	36.095	169	85	4	141	308	255	401	1.68e-20	94.0
MS.gene71482.t1	AT1G34460	36.095	169	85	4	141	308	255	401	1.68e-20	94.0
MS.gene71482.t1	AT1G34460	36.095	169	85	4	141	308	255	401	1.68e-20	94.0
MS.gene71482.t1	AT1G34460	36.095	169	85	4	141	308	255	401	1.68e-20	94.0
MS.gene71482.t1	AT1G34460	36.095	169	85	4	141	308	255	401	1.95e-20	93.6
MS.gene71482.t1	AT1G34460	36.095	169	85	4	141	308	252	398	1.97e-20	93.6
MS.gene71482.t1	AT1G34460	36.095	169	85	4	141	308	252	398	1.97e-20	93.6
MS.gene71482.t1	AT1G34460	36.095	169	85	4	141	308	255	401	2.03e-20	93.6
MS.gene71482.t1	AT1G14750	32.432	185	112	5	166	346	365	540	1.24e-16	82.4
MS.gene71482.t1	AT1G14750	32.432	185	112	5	166	346	365	540	1.26e-16	82.4
MS.gene71482.t1	AT1G14750	32.432	185	112	5	166	346	197	372	1.28e-16	81.6
MS.gene71482.t1	AT1G14750	32.432	185	111	6	166	346	197	371	2.03e-15	78.2
MS.gene71482.t1	AT1G70210	30.303	231	143	7	123	344	17	238	3.41e-15	76.6

Find 89 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGCAAGGTTTCCATGTAAT+TGG	0.188546	1.3:-9540736	None:intergenic
AGTTAAAGGATTCTCCTATT+TGG	0.207301	1.3:+9540441	MS.gene71482:CDS
CCACAGAAGGCTGCACTTGC+AGG	0.212680	1.3:-9539804	None:intergenic
CTCTGCCTTTGCATCCTCTT+TGG	0.224088	1.3:-9539737	None:intergenic
GGACATTGATTCGAAGTTAA+AGG	0.247922	1.3:+9540427	MS.gene71482:CDS
AAATGAAAAGTACCTGTATT+TGG	0.263412	1.3:-9539865	None:intergenic
TGAATACTAGTGTATATATC+AGG	0.293341	1.3:-9540476	None:intergenic
ATGATGTCTCCTTGCAAGTT+TGG	0.320999	1.3:+9539710	MS.gene71482:CDS
AAAAGAGATTCCACCGGTTT+CGG	0.329052	1.3:-9542905	None:intergenic
CACAGCAGATGCAGCTATCT+TGG	0.343056	1.3:-9542448	None:intergenic
TCAAGCTGATCTGGAATTCC+TGG	0.345312	1.3:+9542368	MS.gene71482:CDS
AGCAAAATGGACAAAGAAAA+TGG	0.345326	1.3:+9538265	None:intergenic
ATATTGATAGGTATTGAAAA+TGG	0.354850	1.3:+9541915	MS.gene71482:intron
TGGAAGAAGTTTGTGCTACT+TGG	0.381330	1.3:-9542098	None:intergenic
TCAGGTTGCTCAAGCTGATC+TGG	0.388931	1.3:+9542359	MS.gene71482:intron
CTGAGAAATGTCTTGATTGT+TGG	0.391036	1.3:-9541979	None:intergenic
GTTTCCATGTAATTGGCTAA+TGG	0.400537	1.3:-9540729	None:intergenic
AGTTAATTATACCTCTTGTC+TGG	0.420863	1.3:-9541809	None:intergenic
ATGGATGCTCTGACTGGTTG+AGG	0.422309	1.3:-9542488	None:intergenic
AATGAACAAGCTGTTGTTGT+TGG	0.425751	1.3:+9538343	MS.gene71482:CDS
TGCATTGAGACGACAACCTT+TGG	0.430632	1.3:-9542695	None:intergenic
TTTGCAAATCCATCAGTTCA+AGG	0.431764	1.3:-9542666	None:intergenic
GGGGCATAAGAAGTCCAAAT+AGG	0.432031	1.3:-9540455	None:intergenic
GATTCTGGTTGACTGGCTTG+TGG	0.442775	1.3:+9540785	MS.gene71482:CDS
AAGCAACTGCAGCCTTCGTT+TGG	0.443429	1.3:-9541211	None:intergenic
AGCAAGGGCTAAAGCTTTGA+AGG	0.451859	1.3:+9538309	MS.gene71482:CDS
AACTACTGTCCTTGAACTGA+TGG	0.453205	1.3:+9542657	MS.gene71482:CDS
AAATTCCCTGCTTTCAATGC+AGG	0.457696	1.3:+9539828	MS.gene71482:CDS
ACTAAGTGCCTCAGTTGGCT+TGG	0.457791	1.3:+9540397	MS.gene71482:CDS
ACAGCAAGGTAAAGTGTGTC+TGG	0.458805	1.3:-9541150	None:intergenic
TCGTTTGGTAATCAAACGTT+GGG	0.460508	1.3:-9541196	None:intergenic
CTAAGTGCCTCAGTTGGCTT+GGG	0.464985	1.3:+9540398	MS.gene71482:CDS
CTCAGTTGGCTTGGGAATTG+TGG	0.470396	1.3:+9540406	MS.gene71482:CDS
GGCGAATTTGTCTCCGAAAC+CGG	0.473905	1.3:+9542892	MS.gene71482:CDS
TGGATGCTCTGACTGGTTGA+GGG	0.474594	1.3:-9542487	None:intergenic
TTTGTATAGTGCTCCAGAGT+TGG	0.476724	1.3:-9542613	None:intergenic
TCCATTACACAGAAGAAAGA+AGG	0.481135	1.3:+9539652	MS.gene71482:intron
TATGAAGAGATTTGTGCTCC+TGG	0.485204	1.3:+9541748	MS.gene71482:CDS
TCAACCAGTCAGAGCATCCA+TGG	0.494706	1.3:+9542490	MS.gene71482:CDS
AAACGAAGGCTGCAGTTGCT+TGG	0.504335	1.3:+9541213	MS.gene71482:CDS
ATGAAGAGATTTGTGCTCCT+GGG	0.505750	1.3:+9541749	MS.gene71482:CDS
GAGTGTCCTGCATTGAAAGC+AGG	0.509049	1.3:-9539834	None:intergenic
GGTATTGAAAATGGAGAAAG+AGG	0.514785	1.3:+9541924	MS.gene71482:intron
CCTGCAAGTGCAGCCTTCTG+TGG	0.517202	1.3:+9539804	MS.gene71482:CDS
CAACAATCAAGACATTTCTC+AGG	0.517270	1.3:+9541980	MS.gene71482:CDS
AGACCCATGGATGCTCTGAC+TGG	0.519969	1.3:-9542494	None:intergenic
ACTCTCAACTCTCCAAATAC+AGG	0.521458	1.3:+9539853	MS.gene71482:CDS
TTAAATCTCTCCAGTGTGAA+AGG	0.524126	1.3:+9540703	MS.gene71482:intron
TGGTAATCAAACGTTGGGAA+AGG	0.528424	1.3:-9541191	None:intergenic
TTATTTGCAGAATCCAACTC+TGG	0.529754	1.3:+9542600	MS.gene71482:intron
TTTGGTTGTCCAAACTTGCA+AGG	0.533560	1.3:-9539719	None:intergenic
GCTCTGCTAAATAGTTTGCC+AGG	0.535403	1.3:-9542386	None:intergenic
AGACATCACTCCCGGCATGA+GGG	0.538658	1.3:+9540761	MS.gene71482:CDS
CACAGAAGGCTGCACTTGCA+GGG	0.543806	1.3:-9539803	None:intergenic
ATCATGTTCTGAAGCTACAT+TGG	0.550667	1.3:-9539692	None:intergenic
TTCGTTTGGTAATCAAACGT+TGG	0.551985	1.3:-9541197	None:intergenic
GAATACTAGTGTATATATCA+GGG	0.553135	1.3:-9540475	None:intergenic
TTGCAGCAAGACATCACTCC+CGG	0.557538	1.3:+9540753	MS.gene71482:CDS
AAGACATCACTCCCGGCATG+AGG	0.557995	1.3:+9540760	MS.gene71482:CDS
CTGCTGTGTTACTTGCAAGA+TGG	0.565071	1.3:+9542463	MS.gene71482:CDS
AAGAAAATGGTGTGAATGTG+AGG	0.565412	1.3:+9538278	MS.gene71482:CDS
TCTGGTTGACTGGCTTGTGG+AGG	0.565987	1.3:+9540788	MS.gene71482:CDS
GCAGATGCAGCTATCTTGGA+AGG	0.568316	1.3:-9542444	None:intergenic
AGTGTCCTGCATTGAAAGCA+GGG	0.570481	1.3:-9539833	None:intergenic
ACGCAAAAGTCTTCAACCCC+AGG	0.583284	1.3:-9541766	None:intergenic
AGTAGCACAAACTTCTTCCA+AGG	0.585183	1.3:+9542101	MS.gene71482:CDS
GACAACCAAAGAGGATGCAA+AGG	0.590161	1.3:+9539732	MS.gene71482:CDS
GAGGCCATTAGCCAATTACA+TGG	0.590812	1.3:+9540725	MS.gene71482:CDS
ATGTGAGGGTGACTCGAGCA+AGG	0.595779	1.3:+9538293	MS.gene71482:CDS
GACATCACTCCCGGCATGAG+GGG	0.600953	1.3:+9540762	MS.gene71482:CDS
GGGAGTGATGTCTTGCTGCA+AGG	0.604746	1.3:-9540751	None:intergenic
TCCTAGAAAAGAGATTCCAC+CGG	0.607987	1.3:-9542911	None:intergenic
ACATCACTCCCGGCATGAGG+GGG	0.610619	1.3:+9540763	MS.gene71482:CDS
GATTTGCAAATTAACACCAA+AGG	0.613808	1.3:+9542679	MS.gene71482:CDS
GATCAATGAGATTCACAGCA+AGG	0.622155	1.3:-9541164	None:intergenic
GCAAGTTTGGACAACCAAAG+AGG	0.622371	1.3:+9539723	MS.gene71482:CDS
CAACCAGTCAGAGCATCCAT+GGG	0.628847	1.3:+9542491	MS.gene71482:CDS
TAACACATACTCCAGACAAG+AGG	0.630206	1.3:+9541798	MS.gene71482:CDS
TGTGAGGGTGACTCGAGCAA+GGG	0.633321	1.3:+9538294	MS.gene71482:CDS
AACGTTTGATTACCAAACGA+AGG	0.634318	1.3:+9541199	MS.gene71482:CDS
TGAAGAGATTTGTGCTCCTG+GGG	0.637519	1.3:+9541750	MS.gene71482:CDS
CCTATGACAGTTCAATAGTG+TGG	0.639183	1.3:+9542871	MS.gene71482:intron
CACTAGTATTCATGTCAGAG+AGG	0.642881	1.3:+9540487	MS.gene71482:CDS
GAGAAACTAAGTGCCTCAGT+TGG	0.643191	1.3:+9540392	MS.gene71482:CDS
CACAATTCCCAAGCCAACTG+AGG	0.645149	1.3:-9540405	None:intergenic
AATCTCTCCAGTGTGAAAGG+AGG	0.664729	1.3:+9540706	MS.gene71482:intron
GAATTTGTCTCCGAAACCGG+TGG	0.670360	1.3:+9542895	MS.gene71482:CDS
AATACTAGTGTATATATCAG+GGG	0.674606	1.3:-9540474	None:intergenic
AGAAAATGGTGTGAATGTGA+GGG	0.707664	1.3:+9538279	MS.gene71482:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATATTATTATTATTATTA+TGG	+	chr1.3:9538464-9538483	MS.gene71482:intron	0.0%
!!	AAAATATATACATAATTTCT+TGG	+	chr1.3:9538860-9538879	MS.gene71482:intron	10.0%
!!	ATTATTATTATTATTGAGAT+TGG	+	chr1.3:9538498-9538517	MS.gene71482:intron	10.0%
!!	AGTTACAAATTAATTTAAAC+AGG	-	chr1.3:9539614-9539633	None:intergenic	15.0%
!!	TAATCACTATAAATCTATAA+TGG	-	chr1.3:9540820-9540839	None:intergenic	15.0%
!!	TTTCATTTATTGGATATAAT+TGG	+	chr1.3:9539880-9539899	MS.gene71482:intron	15.0%
!!!	AATTATTTAAGATTGTATAC+TGG	-	chr1.3:9540961-9540980	None:intergenic	15.0%
!!!	ACATTTCATATTTTTAAACT+TGG	-	chr1.3:9541429-9541448	None:intergenic	15.0%
!!!	ATAATTAACTTTTGGTATTA+TGG	+	chr1.3:9541822-9541841	MS.gene71482:intron	15.0%
!!!	GTCTTTTTTTTTTTTTCATT+TGG	+	chr1.3:9540525-9540544	MS.gene71482:intron	15.0%
!!!	TAATTTTTTTTTCTGTTATC+AGG	+	chr1.3:9542341-9542360	MS.gene71482:intron	15.0%
!!!	TATGAATTGAAATAATTTGT+AGG	+	chr1.3:9538558-9538577	MS.gene71482:intron	15.0%
!!!	TATTTTTAAACTTGGTAAAT+CGG	-	chr1.3:9541421-9541440	None:intergenic	15.0%
!!!	TTGTTATTTTTTATCTTGAT+TGG	+	chr1.3:9540343-9540362	MS.gene71482:intron	15.0%
!!	AAAAGAGAAACATATGAAAT+TGG	-	chr1.3:9542815-9542834	None:intergenic	20.0%
!!	AACCAACAAATGAATATAAA+AGG	-	chr1.3:9539004-9539023	None:intergenic	20.0%
!!	AGTAATTTAAATCGTTAACA+TGG	+	chr1.3:9538734-9538753	MS.gene71482:intron	20.0%
!!	GTTAACGATTTAAATTACTA+AGG	-	chr1.3:9538733-9538752	None:intergenic	20.0%
!!	TTGAATGTGAAATAAGAAAT+AGG	-	chr1.3:9540074-9540093	None:intergenic	20.0%
!!	TTTAGTAAAACTTCAAATGA+TGG	-	chr1.3:9539224-9539243	None:intergenic	20.0%
!!!	AATGAGATTTTGTAAATCAA+TGG	+	chr1.3:9539562-9539581	MS.gene71482:intron	20.0%
!!!	AATGATTGTATACTTTGAAA+GGG	+	chr1.3:9539268-9539287	MS.gene71482:intron	20.0%
!!!	AATTGAATTGCATCAATTTT+TGG	+	chr1.3:9541060-9541079	MS.gene71482:intron	20.0%
!!!	ATAAAAACAAGCATTTTGTA+TGG	+	chr1.3:9538606-9538625	MS.gene71482:intron	20.0%
!!!	ATATTGATAGGTATTGAAAA+TGG	+	chr1.3:9541915-9541934	MS.gene71482:intron	20.0%
!!!	ATATTTTAACACAATTTGAG+TGG	-	chr1.3:9538847-9538866	None:intergenic	20.0%
!!!	GTTAGAAAAGAGTATAAAAA+TGG	+	chr1.3:9541563-9541582	MS.gene71482:intron	20.0%
!!!	TCTTTTTTTCTTTACTTTTG+TGG	+	chr1.3:9541714-9541733	MS.gene71482:intron	20.0%
!!!	TTAATTTGTAACTACTGATT+TGG	+	chr1.3:9539621-9539640	MS.gene71482:intron	20.0%
!!!	TTTTATATAAACTTTCAACG+AGG	-	chr1.3:9538652-9538671	None:intergenic	20.0%
!!!	TTTTTATTACGTACAATAGA+TGG	+	chr1.3:9538768-9538787	MS.gene71482:intron	20.0%
!	AATAATAGCAAAGCAAAACT+TGG	-	chr1.3:9541528-9541547	None:intergenic	25.0%
!	AATACTAGTGTATATATCAG+GGG	-	chr1.3:9540477-9540496	None:intergenic	25.0%
!	AATTTAACCACAAAGAGAAT+AGG	-	chr1.3:9542785-9542804	None:intergenic	25.0%
!	AGTATACAATCATTGAGTTT+AGG	-	chr1.3:9539262-9539281	None:intergenic	25.0%
!	ATAATATGATGAGATGTGAT+TGG	+	chr1.3:9540009-9540028	MS.gene71482:intron	25.0%
!	ATATAATTGGTATGCACTAT+CGG	+	chr1.3:9539893-9539912	MS.gene71482:intron	25.0%
!	ATGTGACTCTAATTAGATTT+AGG	-	chr1.3:9542574-9542593	None:intergenic	25.0%
!	CAACAAATGAATATAAAAGG+TGG	-	chr1.3:9539001-9539020	None:intergenic	25.0%
!	CAATGATTGTATACTTTGAA+AGG	+	chr1.3:9539267-9539286	MS.gene71482:intron	25.0%
!	GAATACTAGTGTATATATCA+GGG	-	chr1.3:9540478-9540497	None:intergenic	25.0%
!	TAGTAATTACTAACTGAACA+AGG	+	chr1.3:9540164-9540183	MS.gene71482:intron	25.0%
!	TGAAAAATATCAACATCAGA+AGG	+	chr1.3:9542723-9542742	MS.gene71482:CDS	25.0%
!	TGAATACTAGTGTATATATC+AGG	-	chr1.3:9540479-9540498	None:intergenic	25.0%
!	TGTTGCATATATAAAAGAGT+TGG	+	chr1.3:9539068-9539087	MS.gene71482:intron	25.0%
!!	AAAAGGCAATTATGTTTTCA+TGG	+	chr1.3:9539293-9539312	MS.gene71482:intron	25.0%
!!	CACCTTTTATATTCATTTGT+TGG	+	chr1.3:9538999-9539018	MS.gene71482:intron	25.0%
!!	CATTCAAGATCAAAATTTTG+TGG	-	chr1.3:9541603-9541622	None:intergenic	25.0%
!!	CTCTATATTTTGTCCATAAA+AGG	+	chr1.3:9539531-9539550	MS.gene71482:intron	25.0%
!!	GCAATTTAGTTTAAGCTTAA+TGG	+	chr1.3:9542038-9542057	MS.gene71482:intron	25.0%
!!	TACAGGTACTTTTCATTTAT+TGG	+	chr1.3:9539870-9539889	MS.gene71482:intron	25.0%
!!	TACTCATACATCAAATTTTG+AGG	+	chr1.3:9538411-9538430	MS.gene71482:CDS	25.0%
!!	TACTTTGTAATTTTCCTAGT+TGG	+	chr1.3:9541270-9541289	MS.gene71482:intron	25.0%
!!	TATACTTTGAAAGGGAAAAA+AGG	+	chr1.3:9539276-9539295	MS.gene71482:intron	25.0%
!!	TCATTCAATTAGTCCTTTTA+TGG	-	chr1.3:9539547-9539566	None:intergenic	25.0%
!!	TCTCTTTTAACATAATGAAG+AGG	+	chr1.3:9542827-9542846	MS.gene71482:intron	25.0%
!!	TTGCAATATAAAGCTTTTAG+AGG	-	chr1.3:9539469-9539488	None:intergenic	25.0%
!!	TTTTACGAACTAACATAGAA+AGG	-	chr1.3:9539974-9539993	None:intergenic	25.0%
!!!	AAATGAAAAGTACCTGTATT+TGG	-	chr1.3:9539868-9539887	None:intergenic	25.0%
!!!	AGTCAAATAGTTCTAAATTG+TGG	-	chr1.3:9539513-9539532	None:intergenic	25.0%
!!!	ATCAATTTTTGGCTGTTTAA+TGG	+	chr1.3:9541071-9541090	MS.gene71482:intron	25.0%
!!!	CAAGAGGTATAATTAACTTT+TGG	+	chr1.3:9541814-9541833	MS.gene71482:intron	25.0%
!!!	GAATTTTGATGTCAAACTTA+TGG	-	chr1.3:9538711-9538730	None:intergenic	25.0%
!!!	GCTTTGTTATATTCTTTTTC+AGG	+	chr1.3:9541104-9541123	MS.gene71482:intron	25.0%
	AAAGCAAAACTTGGTAAATC+GGG	-	chr1.3:9541519-9541538	None:intergenic	30.0%
	AACACAATTTGAGTGGTTAA+TGG	-	chr1.3:9538840-9538859	None:intergenic	30.0%
	AACTTGCATCTGACATAATT+AGG	-	chr1.3:9541297-9541316	None:intergenic	30.0%
	AATCGTTAACATGGTTCAAA+TGG	+	chr1.3:9538743-9538762	MS.gene71482:intron	30.0%
	AATGTCTGATCTTTATCGAA+CGG	+	chr1.3:9541444-9541463	MS.gene71482:intron	30.0%
	ACGTACAATAGATGGTTAAA+CGG	+	chr1.3:9538776-9538795	MS.gene71482:intron	30.0%
	AGTTAAAGGATTCTCCTATT+TGG	+	chr1.3:9540441-9540460	MS.gene71482:CDS	30.0%
	AGTTAATTATACCTCTTGTC+TGG	-	chr1.3:9541812-9541831	None:intergenic	30.0%
	ATCGTTAACATGGTTCAAAT+GGG	+	chr1.3:9538744-9538763	MS.gene71482:intron	30.0%
	CAAAGCAAAACTTGGTAAAT+CGG	-	chr1.3:9541520-9541539	None:intergenic	30.0%
	CCACAATTATCATTGTGATA+CGG	+	chr1.3:9539434-9539453	MS.gene71482:intron	30.0%
	CGTATCACAATGATAATTGT+GGG	-	chr1.3:9539436-9539455	None:intergenic	30.0%
	GATAACTGAGAAAAAGAAGA+CGG	-	chr1.3:9541666-9541685	None:intergenic	30.0%
	GATTTGCAAATTAACACCAA+AGG	+	chr1.3:9542679-9542698	MS.gene71482:CDS	30.0%
	GCATTTCTATCATTCCAATT+AGG	+	chr1.3:9542299-9542318	MS.gene71482:intron	30.0%
	GCTTAAACTAAATTGCATGT+AGG	-	chr1.3:9542034-9542053	None:intergenic	30.0%
	TGGATAATCTTAACCAAACA+TGG	+	chr1.3:9539313-9539332	MS.gene71482:intron	30.0%
	TGGATGCATGTGAAAAAAAA+AGG	+	chr1.3:9540029-9540048	MS.gene71482:intron	30.0%
	TTGCTGACAGAAAAAATATC+AGG	-	chr1.3:9541496-9541515	None:intergenic	30.0%
	TTGTAGTTAATTGTGTTGAG+TGG	+	chr1.3:9538958-9538977	MS.gene71482:intron	30.0%
	TTTGATATTGCATCAAAACG+CGG	+	chr1.3:9539410-9539429	MS.gene71482:intron	30.0%
!	AACTAATGCCTTAGGATTTT+GGG	+	chr1.3:9539098-9539117	MS.gene71482:intron	30.0%
!	ATCCTAAGGCATTAGTTATA+TGG	-	chr1.3:9539095-9539114	None:intergenic	30.0%
!	ATGTGATTTTGCAGAAATGT+TGG	-	chr1.3:9538383-9538402	None:intergenic	30.0%
!	ATTCAAGATTAGTCCATGTT+TGG	-	chr1.3:9539329-9539348	None:intergenic	30.0%
!	TAACTAATGCCTTAGGATTT+TGG	+	chr1.3:9539097-9539116	MS.gene71482:intron	30.0%
!	TACTCTTTTCTAACTCTTCA+TGG	-	chr1.3:9541557-9541576	None:intergenic	30.0%
!	TATCCTTGTTTCTTAGACAA+AGG	+	chr1.3:9541013-9541032	MS.gene71482:intron	30.0%
!	TCCTAAGGCATTAGTTATAT+GGG	-	chr1.3:9539094-9539113	None:intergenic	30.0%
!	TGCAAACATAGAGTATTAGT+AGG	-	chr1.3:9540557-9540576	None:intergenic	30.0%
!	TGCTAGTAACTTCTAAAAGT+AGG	-	chr1.3:9540300-9540319	None:intergenic	30.0%
!	TTAACTTTTGGTATTATGGC+TGG	+	chr1.3:9541826-9541845	MS.gene71482:intron	30.0%
!!	AAGTTGATGGTTAATGATGT+TGG	-	chr1.3:9539190-9539209	None:intergenic	30.0%
!!	AGTTGATGGTTAATGATGTT+GGG	-	chr1.3:9539189-9539208	None:intergenic	30.0%
!!	GGTTAATTACGTTAAGTTGA+TGG	-	chr1.3:9539203-9539222	None:intergenic	30.0%
!!	TTCGGATATTTTAGATACCT+TGG	-	chr1.3:9542121-9542140	None:intergenic	30.0%
	AACGTTTGATTACCAAACGA+AGG	+	chr1.3:9541199-9541218	MS.gene71482:CDS	35.0%
	AAGAAAATGGTGTGAATGTG+AGG	+	chr1.3:9538278-9538297	MS.gene71482:CDS	35.0%
	AATGAACAAGCTGTTGTTGT+TGG	+	chr1.3:9538343-9538362	MS.gene71482:CDS	35.0%
	ACCTTCTTTCTTCTGTGTAA+TGG	-	chr1.3:9539656-9539675	None:intergenic	35.0%
	AGAAAATGGTGTGAATGTGA+GGG	+	chr1.3:9538279-9538298	MS.gene71482:CDS	35.0%
	AGTTAATTGTGTTGAGTGGA+TGG	+	chr1.3:9538962-9538981	MS.gene71482:intron	35.0%
	AGTTAGTTAATCAGAACCGT+TGG	+	chr1.3:9541361-9541380	MS.gene71482:intron	35.0%
	ATGCTACAAGACCACAATTA+AGG	-	chr1.3:9539141-9539160	None:intergenic	35.0%
	CAACAATCAAGACATTTCTC+AGG	+	chr1.3:9541980-9541999	MS.gene71482:CDS	35.0%
	CAACATACTAAGAGTCTTCT+TGG	-	chr1.3:9540988-9541007	None:intergenic	35.0%
	CCGTATCACAATGATAATTG+TGG	-	chr1.3:9539437-9539456	None:intergenic	35.0%
	CTGAGAAATGTCTTGATTGT+TGG	-	chr1.3:9541982-9542001	None:intergenic	35.0%
	GACAAAAAAGTAGAAGCAGT+TGG	-	chr1.3:9540613-9540632	None:intergenic	35.0%
	GCACATTTGAACTCAAATCA+TGG	-	chr1.3:9538913-9538932	None:intergenic	35.0%
	GCATGAAATCTAATGAGATC+AGG	+	chr1.3:9542165-9542184	MS.gene71482:intron	35.0%
	GTTCCTTTGTCTAAGAAACA+AGG	-	chr1.3:9541019-9541038	None:intergenic	35.0%
	GTTTCCATGTAATTGGCTAA+TGG	-	chr1.3:9540732-9540751	None:intergenic	35.0%
	TCACTAACCTATTCTCTTTG+TGG	+	chr1.3:9542775-9542794	MS.gene71482:intron	35.0%
	TCCATTACACAGAAGAAAGA+AGG	+	chr1.3:9539652-9539671	MS.gene71482:intron	35.0%
	TCTTGAATCTGTGTATGAGT+TGG	+	chr1.3:9539341-9539360	MS.gene71482:intron	35.0%
	TGACATAATTAGGACCAACT+AGG	-	chr1.3:9541287-9541306	None:intergenic	35.0%
	TTAAATCTCTCCAGTGTGAA+AGG	+	chr1.3:9540703-9540722	MS.gene71482:intron	35.0%
	TTATGTCAGATGCAAGTTCT+TGG	+	chr1.3:9541299-9541318	MS.gene71482:intron	35.0%
	TTATTTGCAGAATCCAACTC+TGG	+	chr1.3:9542600-9542619	MS.gene71482:intron	35.0%
	TTTGCAAATCCATCAGTTCA+AGG	-	chr1.3:9542669-9542688	None:intergenic	35.0%
!	GAAATGCTCTTTGAAGAAAC+TGG	-	chr1.3:9542286-9542305	None:intergenic	35.0%
!	GACTTGACTGTTTTCCTAAT+TGG	-	chr1.3:9542316-9542335	None:intergenic	35.0%
!	GGTATTGAAAATGGAGAAAG+AGG	+	chr1.3:9541924-9541943	MS.gene71482:intron	35.0%
!	TCGTTTGGTAATCAAACGTT+GGG	-	chr1.3:9541199-9541218	None:intergenic	35.0%
!	TTCGTTTGGTAATCAAACGT+TGG	-	chr1.3:9541200-9541219	None:intergenic	35.0%
!	TTTGTTGGTTGAAGTTTGTG+CGG	+	chr1.3:9539014-9539033	MS.gene71482:intron	35.0%
!!	ATCATGTTCTGAAGCTACAT+TGG	-	chr1.3:9539695-9539714	None:intergenic	35.0%
!!	CGTTGACTCTTGATATTGAT+AGG	+	chr1.3:9541903-9541922	MS.gene71482:intron	35.0%
!!	GGACATTGATTCGAAGTTAA+AGG	+	chr1.3:9540427-9540446	MS.gene71482:CDS	35.0%
!!	GTTGATGGTTAATGATGTTG+GGG	-	chr1.3:9539188-9539207	None:intergenic	35.0%
!!	TAATTGTGGTCTTGTAGCAT+TGG	+	chr1.3:9539141-9539160	MS.gene71482:intron	35.0%
	AAATTCCCTGCTTTCAATGC+AGG	+	chr1.3:9539828-9539847	MS.gene71482:CDS	40.0%
	AACCATCTTCTTTGCCTTTC+AGG	+	chr1.3:9542067-9542086	MS.gene71482:intron	40.0%
	AACTACTGTCCTTGAACTGA+TGG	+	chr1.3:9542657-9542676	MS.gene71482:CDS	40.0%
	AAGCTATCCAGATGAGCTTA+TGG	+	chr1.3:9540880-9540899	MS.gene71482:intron	40.0%
	ACTCTCAACTCTCCAAATAC+AGG	+	chr1.3:9539853-9539872	MS.gene71482:CDS	40.0%
	AGTAGCACAAACTTCTTCCA+AGG	+	chr1.3:9542101-9542120	MS.gene71482:CDS	40.0%
	AGTTAATGTTCACAGACCCA+TGG	-	chr1.3:9542510-9542529	None:intergenic	40.0%
	ATGAAGAGATTTGTGCTCCT+GGG	+	chr1.3:9541749-9541768	MS.gene71482:CDS	40.0%
	ATGATGTCTCCTTGCAAGTT+TGG	+	chr1.3:9539710-9539729	MS.gene71482:CDS	40.0%
	ATTCACTGCAGTCAGTAAGT+TGG	-	chr1.3:9541472-9541491	None:intergenic	40.0%
	CACTAGTATTCATGTCAGAG+AGG	+	chr1.3:9540487-9540506	MS.gene71482:CDS	40.0%
	CAGATGCAAGTTCTTGGAAA+TGG	+	chr1.3:9541305-9541324	MS.gene71482:intron	40.0%
	CCACACTATTGAACTGTCAT+AGG	-	chr1.3:9542874-9542893	None:intergenic	40.0%
	CCTATGACAGTTCAATAGTG+TGG	+	chr1.3:9542871-9542890	MS.gene71482:intron	40.0%
	CTGCAAGGTTTCCATGTAAT+TGG	-	chr1.3:9540739-9540758	None:intergenic	40.0%
	GATCAATGAGATTCACAGCA+AGG	-	chr1.3:9541167-9541186	None:intergenic	40.0%
	GCCCATATAACTAATGCCTT+AGG	+	chr1.3:9539090-9539109	MS.gene71482:intron	40.0%
	TAACACATACTCCAGACAAG+AGG	+	chr1.3:9541798-9541817	MS.gene71482:CDS	40.0%
	TATGAAGAGATTTGTGCTCC+TGG	+	chr1.3:9541748-9541767	MS.gene71482:CDS	40.0%
	TGGTAATCAAACGTTGGGAA+AGG	-	chr1.3:9541194-9541213	None:intergenic	40.0%
	TTTGGTTGTCCAAACTTGCA+AGG	-	chr1.3:9539722-9539741	None:intergenic	40.0%
	TTTGTATAGTGCTCCAGAGT+TGG	-	chr1.3:9542616-9542635	None:intergenic	40.0%
!	TAATGCCTTAGGATTTTGGG+TGG	+	chr1.3:9539101-9539120	MS.gene71482:intron	40.0%
!	TGGAAGAAGTTTGTGCTACT+TGG	-	chr1.3:9542101-9542120	None:intergenic	40.0%
!!	AAAAGAGATTCCACCGGTTT+CGG	-	chr1.3:9542908-9542927	None:intergenic	40.0%
!!!	TCATGCTTATTTTGACCGCA+GGG	-	chr1.3:9542151-9542170	None:intergenic	40.0%
!!!	TTCATGCTTATTTTGACCGC+AGG	-	chr1.3:9542152-9542171	None:intergenic	40.0%
	AATCTCTCCAGTGTGAAAGG+AGG	+	chr1.3:9540706-9540725	MS.gene71482:intron	45.0%
	ACAGCAAGGTAAAGTGTGTC+TGG	-	chr1.3:9541153-9541172	None:intergenic	45.0%
	ACTTGGATGAACCTCCTGAA+AGG	-	chr1.3:9542084-9542103	None:intergenic	45.0%
	AGTGTCCTGCATTGAAAGCA+GGG	-	chr1.3:9539836-9539855	None:intergenic	45.0%
	CATCTCCACCCAAAATCCTA+AGG	-	chr1.3:9539109-9539128	None:intergenic	45.0%
	CATCTTCTTTGCCTTTCAGG+AGG	+	chr1.3:9542070-9542089	MS.gene71482:intron	45.0%
	CTCCTGAAAGGCAAAGAAGA+TGG	-	chr1.3:9542072-9542091	None:intergenic	45.0%
	CTGCAACTGCATCGCAATTT+AGG	-	chr1.3:9539377-9539396	None:intergenic	45.0%
	GACAACCAAAGAGGATGCAA+AGG	+	chr1.3:9539732-9539751	MS.gene71482:CDS	45.0%
	GAGAAACTAAGTGCCTCAGT+TGG	+	chr1.3:9540392-9540411	MS.gene71482:CDS	45.0%
	GAGCTGTCTAACTCATCCAA+CGG	-	chr1.3:9541380-9541399	None:intergenic	45.0%
	GAGGCCATTAGCCAATTACA+TGG	+	chr1.3:9540725-9540744	MS.gene71482:CDS	45.0%
	GCAAGTTTGGACAACCAAAG+AGG	+	chr1.3:9539723-9539742	MS.gene71482:CDS	45.0%
	GGGGCATAAGAAGTCCAAAT+AGG	-	chr1.3:9540458-9540477	None:intergenic	45.0%
	GGTTAATGATGTTGGGGAGT+CGG	-	chr1.3:9539182-9539201	None:intergenic	45.0%
	GTTAATGATGTTGGGGAGTC+GGG	-	chr1.3:9539181-9539200	None:intergenic	45.0%
	TCTAATGAGATCAGGACCGA+TGG	+	chr1.3:9542173-9542192	MS.gene71482:intron	45.0%
	TGAAGAGATTTGTGCTCCTG+GGG	+	chr1.3:9541750-9541769	MS.gene71482:CDS	45.0%
	TGCATTGAGACGACAACCTT+TGG	-	chr1.3:9542698-9542717	None:intergenic	45.0%
	TGCGGTGTCTACCTTAATTG+TGG	+	chr1.3:9539127-9539146	MS.gene71482:intron	45.0%
	TTAATGATGTTGGGGAGTCG+GGG	-	chr1.3:9539180-9539199	None:intergenic	45.0%
!	AGCAAGGGCTAAAGCTTTGA+AGG	+	chr1.3:9538309-9538328	MS.gene71482:CDS	45.0%
!	AGCAGGGAATTTTCCACAGA+AGG	-	chr1.3:9539820-9539839	None:intergenic	45.0%
!	GCTCTGCTAAATAGTTTGCC+AGG	-	chr1.3:9542389-9542408	None:intergenic	45.0%
!	TCAAGCTGATCTGGAATTCC+TGG	+	chr1.3:9542368-9542387	MS.gene71482:CDS	45.0%
!!	CTGCTGTGTTACTTGCAAGA+TGG	+	chr1.3:9542463-9542482	MS.gene71482:CDS	45.0%
!!	GTGTATGAGTTGGTCAGAAC+AGG	+	chr1.3:9539351-9539370	MS.gene71482:intron	45.0%
!!	TAGGATTTTGGGTGGAGATG+CGG	+	chr1.3:9539109-9539128	MS.gene71482:intron	45.0%
!!!	TATTTTGACCGCAGGGAATC+TGG	-	chr1.3:9542144-9542163	None:intergenic	45.0%
	AAACGAAGGCTGCAGTTGCT+TGG	+	chr1.3:9541213-9541232	MS.gene71482:CDS	50.0%
	AAGCAACTGCAGCCTTCGTT+TGG	-	chr1.3:9541214-9541233	None:intergenic	50.0%
	ACGCAAAAGTCTTCAACCCC+AGG	-	chr1.3:9541769-9541788	None:intergenic	50.0%
	ACTAAGTGCCTCAGTTGGCT+TGG	+	chr1.3:9540397-9540416	MS.gene71482:CDS	50.0%
	CACAATTCCCAAGCCAACTG+AGG	-	chr1.3:9540408-9540427	None:intergenic	50.0%
	CACAGCAGATGCAGCTATCT+TGG	-	chr1.3:9542451-9542470	None:intergenic	50.0%
	CTAATGGCCTCCTTTCACAC+TGG	-	chr1.3:9540716-9540735	None:intergenic	50.0%
	CTCTGCCTTTGCATCCTCTT+TGG	-	chr1.3:9539740-9539759	None:intergenic	50.0%
	GAATTTGTCTCCGAAACCGG+TGG	+	chr1.3:9542895-9542914	MS.gene71482:CDS	50.0%
	GACGTGTCCATAAGCTCATC+TGG	-	chr1.3:9540890-9540909	None:intergenic	50.0%
	GAGTGTCCTGCATTGAAAGC+AGG	-	chr1.3:9539837-9539856	None:intergenic	50.0%
	GCAGATGCAGCTATCTTGGA+AGG	-	chr1.3:9542447-9542466	None:intergenic	50.0%
	GGCGAATTTGTCTCCGAAAC+CGG	+	chr1.3:9542892-9542911	MS.gene71482:CDS	50.0%
	TAATGATGTTGGGGAGTCGG+GGG	-	chr1.3:9539179-9539198	None:intergenic	50.0%
	TATCCGAACCAGATTCCCTG+CGG	+	chr1.3:9542133-9542152	MS.gene71482:intron	50.0%
	TCAGGACCGATGGATCAAGA+CGG	+	chr1.3:9542183-9542202	MS.gene71482:intron	50.0%
	TGTGAGCCGTCTTGATCCAT+CGG	-	chr1.3:9542192-9542211	None:intergenic	50.0%
	TTGCAGCAAGACATCACTCC+CGG	+	chr1.3:9540753-9540772	MS.gene71482:CDS	50.0%
!	ATGGATGCTCTGACTGGTTG+AGG	-	chr1.3:9542491-9542510	None:intergenic	50.0%
!	CAACCAGTCAGAGCATCCAT+GGG	+	chr1.3:9542491-9542510	MS.gene71482:CDS	50.0%
!	CTAAGTGCCTCAGTTGGCTT+GGG	+	chr1.3:9540398-9540417	MS.gene71482:CDS	50.0%
!	TCAACCAGTCAGAGCATCCA+TGG	+	chr1.3:9542490-9542509	MS.gene71482:CDS	50.0%
!	TCAGGTTGCTCAAGCTGATC+TGG	+	chr1.3:9542359-9542378	MS.gene71482:intron	50.0%
!	TGGATGCTCTGACTGGTTGA+GGG	-	chr1.3:9542490-9542509	None:intergenic	50.0%
!!	CTCAGTTGGCTTGGGAATTG+TGG	+	chr1.3:9540406-9540425	MS.gene71482:CDS	50.0%
!!	GATTCTGGTTGACTGGCTTG+TGG	+	chr1.3:9540785-9540804	MS.gene71482:CDS	50.0%
	AACCAGAATCCCCCTCATGC+CGG	-	chr1.3:9540775-9540794	None:intergenic	55.0%
	AAGACATCACTCCCGGCATG+AGG	+	chr1.3:9540760-9540779	MS.gene71482:CDS	55.0%
	AGACATCACTCCCGGCATGA+GGG	+	chr1.3:9540761-9540780	MS.gene71482:CDS	55.0%
	AGACCCATGGATGCTCTGAC+TGG	-	chr1.3:9542497-9542516	None:intergenic	55.0%
	ATGTGAGGGTGACTCGAGCA+AGG	+	chr1.3:9538293-9538312	MS.gene71482:CDS	55.0%
	CACAGAAGGCTGCACTTGCA+GGG	-	chr1.3:9539806-9539825	None:intergenic	55.0%
	GGGAGTGATGTCTTGCTGCA+AGG	-	chr1.3:9540754-9540773	None:intergenic	55.0%
	TGACCGCAGGGAATCTGGTT+CGG	-	chr1.3:9542139-9542158	None:intergenic	55.0%
	TGTGAGGGTGACTCGAGCAA+GGG	+	chr1.3:9538294-9538313	MS.gene71482:CDS	55.0%
!	TGAGGGGGATTCTGGTTGAC+TGG	+	chr1.3:9540778-9540797	MS.gene71482:CDS	55.0%
!!	TCTGGTTGACTGGCTTGTGG+AGG	+	chr1.3:9540788-9540807	MS.gene71482:CDS	55.0%
	ACATCACTCCCGGCATGAGG+GGG	+	chr1.3:9540763-9540782	MS.gene71482:CDS	60.0%
	ACCAGAATCCCCCTCATGCC+GGG	-	chr1.3:9540774-9540793	None:intergenic	60.0%
	CCACAGAAGGCTGCACTTGC+AGG	-	chr1.3:9539807-9539826	None:intergenic	60.0%
	CCTGCAAGTGCAGCCTTCTG+TGG	+	chr1.3:9539804-9539823	MS.gene71482:CDS	60.0%
	GACATCACTCCCGGCATGAG+GGG	+	chr1.3:9540762-9540781	MS.gene71482:CDS	60.0%
	GGTCTGCGCAGCTGCAATCG+CGG	-	chr1.3:9539492-9539511	None:intergenic	65.0%
	TCCCGGCATGAGGGGGATTC+TGG	+	chr1.3:9540770-9540789	MS.gene71482:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	9538271	9542931	9538271	ID=MS.gene71482
chr1.3	mRNA	9538271	9542931	9538271	ID=MS.gene71482.t1;Parent=MS.gene71482
chr1.3	exon	9538271	9538432	9538271	ID=MS.gene71482.t1.exon1;Parent=MS.gene71482.t1
chr1.3	CDS	9538271	9538432	9538271	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9539664	9539874	9539664	ID=MS.gene71482.t1.exon2;Parent=MS.gene71482.t1
chr1.3	CDS	9539664	9539874	9539664	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9540375	9540508	9540375	ID=MS.gene71482.t1.exon3;Parent=MS.gene71482.t1
chr1.3	CDS	9540375	9540508	9540375	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9540717	9540809	9540717	ID=MS.gene71482.t1.exon4;Parent=MS.gene71482.t1
chr1.3	CDS	9540717	9540809	9540717	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9541126	9541259	9541126	ID=MS.gene71482.t1.exon5;Parent=MS.gene71482.t1
chr1.3	CDS	9541126	9541259	9541126	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9541744	9541819	9541744	ID=MS.gene71482.t1.exon6;Parent=MS.gene71482.t1
chr1.3	CDS	9541744	9541819	9541744	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9541925	9542001	9541925	ID=MS.gene71482.t1.exon7;Parent=MS.gene71482.t1
chr1.3	CDS	9541925	9542001	9541925	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9542089	9542122	9542089	ID=MS.gene71482.t1.exon8;Parent=MS.gene71482.t1
chr1.3	CDS	9542089	9542122	9542089	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9542363	9542512	9542363	ID=MS.gene71482.t1.exon9;Parent=MS.gene71482.t1
chr1.3	CDS	9542363	9542512	9542363	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9542610	9542744	9542610	ID=MS.gene71482.t1.exon10;Parent=MS.gene71482.t1
chr1.3	CDS	9542610	9542744	9542610	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1
chr1.3	exon	9542881	9542931	9542881	ID=MS.gene71482.t1.exon11;Parent=MS.gene71482.t1
chr1.3	CDS	9542881	9542931	9542881	ID=cds.MS.gene71482.t1;Parent=MS.gene71482.t1

Gene Sequence

>MS.gene71482

ATGGACAAAGAAAATGGTGTGAATGTGAGGGTGACTCGAGCAAGGGCTAAAGCTTTGAAGGAGTCTTCAAGAAATGAACAAGCTGTTGTTGTTGGACTGAGAGATGTGACCAACATTTCTGCAAAATCACATCATAAGCGTACTCATACATCAAATTTTGAGGTATATACATATATAAATGTAACTATGATTTTTATATTATTATTATTATTATGGTTATTGTTATTATTATTATTATTATTGAGATTGGTTTGTTCATGTGTGTTTTTTAAATTGTTAAAATTGAGTATGAATTGAAATAATTTGTAGGACATCAATACATGTTTGTTTGTACTATAAAAACAAGCATTTTGTATGGAGATCTGAACTCTTGTAACACCTCGTTGAAAGTTTATATAAAATATAGTATAAATTTTTAAATAATTGTGTTATTTTGACCATAAGTTTGACATCAAAATTCCTTAGTAATTTAAATCGTTAACATGGTTCAAATGGGTTTTTTATTACGTACAATAGATGGTTAAACGGAATCAATCATGATTTTGAATTCAATGATGCATATATGTCCATTAACCACTCAAATTGTGTTAAAATATATACATAATTTCTTGGAATTAAAATATACATGATATTGATTAACCATGATTTGAGTTCAAATGTGCACTTGAAAGTCGTAGTTATTTAAAATTGTAGTTAATTGTGTTGAGTGGATGGTCAATAAGTTGTGCCACCTTTTATATTCATTTGTTGGTTGAAGTTTGTGCGGTTAGTCTCACATTAATTATGAATGAACAAAATGTTGCATATATAAAAGAGTTGGCCCATATAACTAATGCCTTAGGATTTTGGGTGGAGATGCGGTGTCTACCTTAATTGTGGTCTTGTAGCATTGGCTCATCGTTGCTCCCCCGACTCCCCAACATCATTAACCATCAACTTAACGTAATTAACCATCATTTGAAGTTTTACTAAAATCATGTTGAAACTACCTAAACTCAATGATTGTATACTTTGAAAGGGAAAAAAGGCAATTATGTTTTCATGGATAATCTTAACCAAACATGGACTAATCTTGAATCTGTGTATGAGTTGGTCAGAACAGGCCTAAATTGCGATGCAGTTGCAGTTACGCTACAAACTTTGATATTGCATCAAAACGCGGCCCACAATTATCATTGTGATACGGCTGTGAAGACCTCTAAAAGCTTTATATTGCAACCGCGATTGCAGCTGCGCAGACCACAATTTAGAACTATTTGACTCTATATTTTGTCCATAAAAGGACTAATTGAATGAGATTTTGTAAATCAATGGAGTGAATAATTTCTTGAACTACATTGCCTGTTTAAATTAATTTGTAACTACTGATTTGGTGATATTGTCCATTACACAGAAGAAAGAAGGTTCTAAGAAGAGAAAGACCAATGTAGCTTCAGAACATGATGTCTCCTTGCAAGTTTGGACAACCAAAGAGGATGCAAAGGCAGAGTTAGCTAAAGACTCTTCAACATCAACAATGACAAAGAAAGACTCCCTGCAAGTGCAGCCTTCTGTGGAAAATTCCCTGCTTTCAATGCAGGACACTCTCAACTCTCCAAATACAGGTACTTTTCATTTATTGGATATAATTGGTATGCACTATCGGCGTAAGTAAGTTTTACACATGCATTCAATCACATTCACATCTCATTATTATATCACCTTTCTATGTTAGTTCGTAAAATATCTCGAAATTATTATAATATGATGAGATGTGATTGGATGCATGTGAAAAAAAAAGGTTTTCATTGATAGTGAATACCTATTTCTTATTTCACATTCAAGTGCATAGTATATGTATAATGTAGTAACTACTAACTAATACATTGCTTACACAATCAAGTTTTATATCAATAGTAATTACTAACTGAACAAGGCAATGATAGTATTGATATGAAGTTACAATTTTAAAGTAATCTGCAGAAGCATACAAATACAAATAAGTTACAATATGAAGTTGAGTATTCACTGCAAAGATAAGATAAAACCTACTTTTAGAAGTTACTAGCATTTCATTAATTACTTATTAGTCATTGTTATTTTTTATCTTGATTGGATTATGCAGACATAAATTTGATATGTGAGAAACTAAGTGCCTCAGTTGGCTTGGGAATTGTGGACATTGATTCGAAGTTAAAGGATTCTCCTATTTGGACTTCTTATGCCCCTGATATATACACTAGTATTCATGTCAGAGAGGTTTGTGTTGTAATATGTCTTTTTTTTTTTTTCATTTGGATGATACCTACTAATACTCTATGTTTGCATCTTTGTTAATATTAATTGTTATGATGAAAACTCCAACTGCTTCTACTTTTTTGTCAACAGTATAAAAGTAAACAACATATTTATTTATTCATTAATGTTATAACATTGTTGCATAATGTGAAACTTTAAATCTCTCCAGTGTGAAAGGAGGCCATTAGCCAATTACATGGAAACCTTGCAGCAAGACATCACTCCCGGCATGAGGGGGATTCTGGTTGACTGGCTTGTGGAGGTTAGTACCATTATAGATTTATAGTGATTATGCATAAGCTGTTTTCATATGAGCTACAAGATGTTTTCATAAGCTATCCAGATGAGCTTATGGACACGTCATAAGCTATTTTCATAAGTTCTCTTAAACAGTCTCTCAAATGCTTATGCCAGTATACAATCTTAAATAATTCAATCCAAGAAGACTCTTAGTATGTTGTATTGTATCCTTGTTTCTTAGACAAAGGAACATTAAAAATATGAGCACTCTAAATTGAATTGCATCAATTTTTGGCTGTTTAATGGATTTGCTGAAGCTTTGTTATATTCTTTTTCAGGTTTCTGATGAGTTTAAACTAGTTCCAGACACACTTTACCTTGCTGTGAATCTCATTGATCGATTCCTTTCCCAACGTTTGATTACCAAACGAAGGCTGCAGTTGCTTGGTATTACTTGCATGCTGATTTCATCGTAAGTACAATACTTTGTAATTTTCCTAGTTGGTCCTAATTATGTCAGATGCAAGTTCTTGGAAATGGATTTCTTGAAGTCAAACTTACACATAGCACTGCAGTTAGTTAATCAGAACCGTTGGATGAGTTAGACAGCTCGCTAAATTGATTTGAAATCCGATTTACCAAGTTTAAAAATATGAAATGTCTGATCTTTATCGAACGGTTCCAACTTACTGACTGCAGTGAATGCCTGATATTTTTTCTGTCAGCAACCCGATTTACCAAGTTTTGCTTTGCTATTATTACATAGCCATGAAGAGTTAGAAAAGAGTATAAAAATGGTGTTATAATTTATTCCACAAAATTTTGATCTTGAATGCATTTGATGAATCTGATATGACAACAGATAATGTACAATGCCGTCTTCTTTTTCTCAGTTATCAACTTATCAAGAAGAAATTCTAAATTATTCTTTTTTTCTTTACTTTTGTGGATTTAAGTAAGTATGAAGAGATTTGTGCTCCTGGGGTTGAAGACTTTTGCGTCATCACAGATAACACATACTCCAGACAAGAGGTATAATTAACTTTTGGTATTATGGCTGGAAACTTCATCTTTTCAATTTGCTTTCATAATGACTGATATATTTAACACTTAATCGTTGACTCTTGATATTGATAGGTATTGAAAATGGAGAAAGAGGTGCTAAATCTTCTGCATTTTCAATTAGCTGTTCCAACAATCAAGACATTTCTCAGGTACATATTATATAAAAACAATTTTTGTTCCTACATGCAATTTAGTTTAAGCTTAATGGAACTATAACCATCTTCTTTGCCTTTCAGGAGGTTCATCCAAGTAGCACAAACTTCTTCCAAGGTATCTAAAATATCCGAACCAGATTCCCTGCGGTCAAAATAAGCATGAAATCTAATGAGATCAGGACCGATGGATCAAGACGGCTCACATTTCAACTTTAATAAATCAAATTCAAAATACAAATTTGAAATCTGAGTCGTCTTATCTTAATCAAACTGTGCCAGTTTCTTCAAAGAGCATTTCTATCATTCCAATTAGGAAAACAGTCAAGTCGATTGTAATTTTTTTTTCTGTTATCAGGTTGCTCAAGCTGATCTGGAATTCCTGGCAAACTATTTAGCAGAGCTTGCACTTGTTGAATACAGCTTCTTGCAGTTTCAACCTTCCAAGATAGCTGCATCTGCTGTGTTACTTGCAAGATGGACCCTCAACCAGTCAGAGCATCCATGGGTCTGTGAACATTAACTTGCAAGTTTACAATTAGCTTATTAGTTTATACTTAAATAAACCTAAATCTAATTAGAGTCACATGTGCATTTATTTGCAGAATCCAACTCTGGAGCACTATACAAATTACAAAGCATCAGAGCTGAAAACTACTGTCCTTGAACTGATGGATTTGCAAATTAACACCAAAGGTTGTCGTCTCAATGCAGTACGTGAAAAATATCAACATCAGAAGGTTAGAAATATATTTTTTTCTATTGTTCTTTCACTAACCTATTCTCTTTGTGGTTAAATTCAGTTAACCAATTTCATATGTTTCTCTTTTAACATAATGAAGAGGCTACTGACATTGAACTTTCTTCCTATGACAGTTCAATAGTGTGGCGAATTTGTCTCCGAAACCGGTGGAATCTCTTTTCTAG

Protein sequence

>MS.gene71482.t1

MDKENGVNVRVTRARAKALKESSRNEQAVVVGLRDVTNISAKSHHKRTHTSNFEKKEGSKKRKTNVASEHDVSLQVWTTKEDAKAELAKDSSTSTMTKKDSLQVQPSVENSLLSMQDTLNSPNTDINLICEKLSASVGLGIVDIDSKLKDSPIWTSYAPDIYTSIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVSDEFKLVPDTLYLAVNLIDRFLSQRLITKRRLQLLGITCMLISSKYEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASAVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELMDLQINTKGCRLNAVREKYQHQKFNSVANLSPKPVESLF