Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072963.t1 | XP_024635368.1 | 84.6 | 481 | 15 | 3 | 1 | 425 | 1 | 478 | 2.30E-212 | 748 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072963.t1 | Q39071 | 53.4 | 442 | 173 | 8 | 2 | 421 | 11 | 441 | 1.9e-106 | 387.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072963.t1 | G7JBQ1 | 84.6 | 481 | 15 | 3 | 1 | 425 | 1 | 478 | 1.7e-212 | 748.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene072963 | 0.807851 | 4.13E-50 | -1.69E-46 |
| MS.gene049418 | MS.gene072963 | 0.805369 | 1.38E-49 | -1.69E-46 |
| MS.gene049622 | MS.gene072963 | 0.800606 | 1.33E-48 | -1.69E-46 |
| MS.gene04985 | MS.gene072963 | 0.802503 | 5.44E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene072963 | 0.893399 | 6.52E-75 | -1.69E-46 |
| MS.gene050297 | MS.gene072963 | 0.869786 | 2.39E-66 | -1.69E-46 |
| MS.gene051094 | MS.gene072963 | 0.833681 | 4.64E-56 | -1.69E-46 |
| MS.gene051263 | MS.gene072963 | 0.824543 | 7.62E-54 | -1.69E-46 |
| MS.gene051629 | MS.gene072963 | 0.83436 | 3.13E-56 | -1.69E-46 |
| MS.gene051742 | MS.gene072963 | 0.829272 | 5.65E-55 | -1.69E-46 |
| MS.gene051816 | MS.gene072963 | 0.811865 | 5.65E-51 | -1.69E-46 |
| MS.gene051955 | MS.gene072963 | 0.869918 | 2.16E-66 | -1.69E-46 |
| MS.gene052143 | MS.gene072963 | 0.854516 | 1.17E-61 | -1.69E-46 |
| MS.gene052308 | MS.gene072963 | 0.830616 | 2.66E-55 | -1.69E-46 |
| MS.gene052367 | MS.gene072963 | 0.888785 | 4.34E-73 | -1.69E-46 |
| MS.gene053173 | MS.gene072963 | 0.834914 | 2.27E-56 | -1.69E-46 |
| MS.gene053348 | MS.gene072963 | 0.849372 | 3.37E-60 | -1.69E-46 |
| MS.gene053416 | MS.gene072963 | 0.865094 | 7.58E-65 | -1.69E-46 |
| MS.gene053417 | MS.gene072963 | 0.863422 | 2.52E-64 | -1.69E-46 |
| MS.gene053500 | MS.gene072963 | 0.807164 | 5.78E-50 | -1.69E-46 |
| MS.gene05369 | MS.gene072963 | 0.832461 | 9.33E-56 | -1.69E-46 |
| MS.gene053929 | MS.gene072963 | 0.810777 | 9.74E-51 | -1.69E-46 |
| MS.gene054551 | MS.gene072963 | 0.853346 | 2.54E-61 | -1.69E-46 |
| MS.gene054552 | MS.gene072963 | 0.805903 | 1.07E-49 | -1.69E-46 |
| MS.gene054593 | MS.gene072963 | 0.848444 | 6.11E-60 | -1.69E-46 |
| MS.gene054643 | MS.gene072963 | 0.822824 | 1.93E-53 | -1.69E-46 |
| MS.gene055308 | MS.gene072963 | 0.846409 | 2.21E-59 | -1.69E-46 |
| MS.gene055411 | MS.gene072963 | 0.821946 | 3.08E-53 | -1.69E-46 |
| MS.gene055578 | MS.gene072963 | 0.858747 | 6.66E-63 | -1.69E-46 |
| MS.gene055579 | MS.gene072963 | 0.845628 | 3.61E-59 | -1.69E-46 |
| MS.gene055957 | MS.gene072963 | 0.865155 | 7.25E-65 | -1.69E-46 |
| MS.gene056041 | MS.gene072963 | 0.923414 | 2.74E-89 | -1.69E-46 |
| MS.gene056042 | MS.gene072963 | 0.892215 | 1.95E-74 | -1.69E-46 |
| MS.gene056335 | MS.gene072963 | 0.806155 | 9.44E-50 | -1.69E-46 |
| MS.gene05640 | MS.gene072963 | 0.833344 | 5.63E-56 | -1.69E-46 |
| MS.gene056526 | MS.gene072963 | 0.882415 | 1.06E-70 | -1.69E-46 |
| MS.gene056528 | MS.gene072963 | 0.848672 | 5.28E-60 | -1.69E-46 |
| MS.gene057358 | MS.gene072963 | 0.818579 | 1.82E-52 | -1.69E-46 |
| MS.gene057359 | MS.gene072963 | 0.808549 | 2.93E-50 | -1.69E-46 |
| MS.gene057458 | MS.gene072963 | 0.825929 | 3.58E-54 | -1.69E-46 |
| MS.gene057483 | MS.gene072963 | 0.808256 | 3.39E-50 | -1.69E-46 |
| MS.gene058196 | MS.gene072963 | 0.87367 | 1.23E-67 | -1.69E-46 |
| MS.gene058197 | MS.gene072963 | 0.875278 | 3.49E-68 | -1.69E-46 |
| MS.gene058198 | MS.gene072963 | 0.871571 | 6.17E-67 | -1.69E-46 |
| MS.gene058818 | MS.gene072963 | 0.818372 | 2.03E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene072963 | 0.809803 | 1.58E-50 | -1.69E-46 |
| MS.gene058853 | MS.gene072963 | 0.823713 | 1.19E-53 | -1.69E-46 |
| MS.gene059300 | MS.gene072963 | 0.879575 | 1.11E-69 | -1.69E-46 |
| MS.gene059553 | MS.gene072963 | 0.855704 | 5.28E-62 | -1.69E-46 |
| MS.gene060473 | MS.gene072963 | 0.897505 | 1.32E-76 | -1.69E-46 |
| MS.gene060492 | MS.gene072963 | 0.815034 | 1.14E-51 | -1.69E-46 |
| MS.gene060565 | MS.gene072963 | 0.900786 | 5.17E-78 | -1.69E-46 |
| MS.gene06057 | MS.gene072963 | 0.885441 | 8.11E-72 | -1.69E-46 |
| MS.gene06093 | MS.gene072963 | 0.842755 | 2.13E-58 | -1.69E-46 |
| MS.gene061099 | MS.gene072963 | 0.891198 | 4.94E-74 | -1.69E-46 |
| MS.gene061260 | MS.gene072963 | 0.85873 | 6.74E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072963 | MS.gene028366 | PPI |
| MS.gene67555 | MS.gene072963 | PPI |
| MS.gene061932 | MS.gene072963 | PPI |
| MS.gene007486 | MS.gene072963 | PPI |
| MS.gene072963 | MS.gene62819 | PPI |
| MS.gene89090 | MS.gene072963 | PPI |
| MS.gene072963 | MS.gene033401 | PPI |
| MS.gene55900 | MS.gene072963 | PPI |
| MS.gene00474 | MS.gene072963 | PPI |
| MS.gene36424 | MS.gene072963 | PPI |
| MS.gene072963 | MS.gene044085 | PPI |
| MS.gene072963 | MS.gene09785 | PPI |
| MS.gene007487 | MS.gene072963 | PPI |
| MS.gene28739 | MS.gene072963 | PPI |
| MS.gene072963 | MS.gene00063 | PPI |
| MS.gene018518 | MS.gene072963 | PPI |
| MS.gene36271 | MS.gene072963 | PPI |
| MS.gene072963 | MS.gene007485 | PPI |
| MS.gene67884 | MS.gene072963 | PPI |
| MS.gene072963 | MS.gene71260 | PPI |
| MS.gene36273 | MS.gene072963 | PPI |
| MS.gene68361 | MS.gene072963 | PPI |
| MS.gene072963 | MS.gene37226 | PPI |
| MS.gene65301 | MS.gene072963 | PPI |
| MS.gene35086 | MS.gene072963 | PPI |
| MS.gene00478 | MS.gene072963 | PPI |
| MS.gene64859 | MS.gene072963 | PPI |
| MS.gene072963 | MS.gene24450 | PPI |
| MS.gene22482 | MS.gene072963 | PPI |
| MS.gene065314 | MS.gene072963 | PPI |
| MS.gene011448 | MS.gene072963 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072963.t1 | MTR_3g107970 | 84.615 | 481 | 15 | 3 | 1 | 425 | 1 | 478 | 0.0 | 808 |
| MS.gene072963.t1 | MTR_1g011470 | 57.245 | 421 | 152 | 6 | 17 | 421 | 14 | 422 | 1.32e-159 | 457 |
| MS.gene072963.t1 | MTR_2g102550 | 47.086 | 429 | 199 | 6 | 3 | 413 | 2 | 420 | 2.74e-126 | 372 |
| MS.gene072963.t1 | MTR_2g102520 | 65.328 | 274 | 92 | 3 | 151 | 421 | 206 | 479 | 3.39e-122 | 363 |
| MS.gene072963.t1 | MTR_3g088415 | 55.147 | 272 | 120 | 2 | 153 | 422 | 233 | 504 | 2.39e-102 | 313 |
| MS.gene072963.t1 | MTR_3g088405 | 53.435 | 262 | 120 | 1 | 152 | 411 | 235 | 496 | 3.59e-99 | 305 |
| MS.gene072963.t1 | MTR_1g018680 | 51.095 | 274 | 132 | 1 | 149 | 420 | 80 | 353 | 1.83e-91 | 281 |
| MS.gene072963.t1 | MTR_3g088415 | 60.096 | 208 | 83 | 0 | 153 | 360 | 233 | 440 | 5.55e-89 | 277 |
| MS.gene072963.t1 | MTR_3g102530 | 49.242 | 264 | 132 | 1 | 155 | 416 | 79 | 342 | 5.79e-85 | 264 |
| MS.gene072963.t1 | MTR_3g102510 | 46.212 | 264 | 142 | 0 | 153 | 416 | 67 | 330 | 1.65e-81 | 254 |
| MS.gene072963.t1 | MTR_3g102520 | 47.015 | 268 | 139 | 2 | 152 | 416 | 82 | 349 | 1.91e-79 | 250 |
| MS.gene072963.t1 | MTR_3g102560 | 50.787 | 254 | 118 | 2 | 165 | 416 | 69 | 317 | 2.50e-74 | 235 |
| MS.gene072963.t1 | MTR_3g102540 | 50.781 | 256 | 116 | 5 | 164 | 416 | 13 | 261 | 4.86e-73 | 230 |
| MS.gene072963.t1 | MTR_3g088415 | 64.516 | 155 | 55 | 0 | 153 | 307 | 233 | 387 | 5.67e-70 | 226 |
| MS.gene072963.t1 | MTR_5g023790 | 41.961 | 255 | 141 | 3 | 160 | 414 | 172 | 419 | 9.44e-58 | 195 |
| MS.gene072963.t1 | MTR_5g088980 | 41.797 | 256 | 141 | 5 | 160 | 414 | 165 | 413 | 2.02e-57 | 194 |
| MS.gene072963.t1 | MTR_5g023790 | 45.370 | 216 | 111 | 3 | 160 | 375 | 172 | 380 | 2.17e-55 | 188 |
| MS.gene072963.t1 | MTR_8g074000 | 39.608 | 255 | 147 | 3 | 160 | 414 | 176 | 423 | 3.68e-55 | 189 |
| MS.gene072963.t1 | MTR_7g089080 | 37.209 | 344 | 177 | 10 | 88 | 414 | 130 | 451 | 1.45e-54 | 196 |
| MS.gene072963.t1 | MTR_5g023790 | 46.711 | 152 | 80 | 1 | 160 | 311 | 172 | 322 | 1.55e-39 | 145 |
| MS.gene072963.t1 | MTR_3g060770 | 30.870 | 230 | 145 | 6 | 151 | 375 | 23 | 243 | 2.36e-25 | 105 |
| MS.gene072963.t1 | MTR_3g060400 | 31.250 | 224 | 140 | 6 | 157 | 375 | 25 | 239 | 4.10e-25 | 104 |
| MS.gene072963.t1 | MTR_3g460990 | 31.250 | 224 | 140 | 6 | 157 | 375 | 25 | 239 | 4.10e-25 | 104 |
| MS.gene072963.t1 | MTR_3g060410 | 34.375 | 192 | 117 | 5 | 189 | 375 | 131 | 318 | 4.30e-25 | 105 |
| MS.gene072963.t1 | MTR_3g061680 | 31.250 | 224 | 140 | 6 | 157 | 375 | 19 | 233 | 1.48e-24 | 102 |
| MS.gene072963.t1 | MTR_3g060820 | 30.804 | 224 | 141 | 6 | 157 | 375 | 19 | 233 | 1.02e-23 | 100 |
| MS.gene072963.t1 | MTR_1g032850 | 35.359 | 181 | 103 | 5 | 178 | 355 | 362 | 531 | 1.43e-18 | 88.2 |
| MS.gene072963.t1 | MTR_5g044040 | 40.260 | 77 | 46 | 0 | 215 | 291 | 7 | 83 | 7.25e-17 | 77.0 |
| MS.gene072963.t1 | MTR_5g011900 | 29.730 | 148 | 101 | 2 | 186 | 332 | 95 | 240 | 2.00e-15 | 75.9 |
| MS.gene072963.t1 | MTR_3g100710 | 26.840 | 231 | 132 | 6 | 128 | 344 | 44 | 251 | 1.15e-14 | 75.5 |
| MS.gene072963.t1 | MTR_6g045270 | 27.972 | 286 | 171 | 13 | 152 | 425 | 38 | 300 | 1.32e-13 | 71.6 |
| MS.gene072963.t1 | MTR_4g080990 | 26.816 | 179 | 124 | 4 | 172 | 344 | 69 | 246 | 1.13e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072963.t1 | AT5G25380 | 54.147 | 434 | 166 | 8 | 10 | 421 | 19 | 441 | 2.46e-146 | 424 |
| MS.gene072963.t1 | AT5G25380 | 53.580 | 433 | 164 | 8 | 10 | 421 | 19 | 435 | 4.16e-145 | 420 |
| MS.gene072963.t1 | AT5G25380 | 53.580 | 433 | 164 | 8 | 10 | 421 | 19 | 435 | 4.16e-145 | 420 |
| MS.gene072963.t1 | AT5G11300 | 52.304 | 434 | 161 | 6 | 13 | 421 | 22 | 434 | 2.35e-144 | 418 |
| MS.gene072963.t1 | AT5G25380 | 53.606 | 416 | 157 | 7 | 10 | 405 | 19 | 418 | 2.17e-140 | 408 |
| MS.gene072963.t1 | AT1G80370 | 64.504 | 262 | 93 | 0 | 152 | 413 | 189 | 450 | 2.25e-123 | 366 |
| MS.gene072963.t1 | AT1G15570 | 61.993 | 271 | 102 | 1 | 152 | 421 | 180 | 450 | 1.15e-120 | 358 |
| MS.gene072963.t1 | AT5G11300 | 50.133 | 375 | 142 | 5 | 13 | 363 | 22 | 375 | 6.14e-116 | 345 |
| MS.gene072963.t1 | AT1G44110 | 46.111 | 360 | 179 | 4 | 59 | 411 | 94 | 445 | 6.59e-109 | 329 |
| MS.gene072963.t1 | AT5G43080 | 52.652 | 264 | 125 | 0 | 153 | 416 | 80 | 343 | 9.63e-99 | 299 |
| MS.gene072963.t1 | AT5G43080 | 53.030 | 264 | 119 | 1 | 153 | 416 | 80 | 338 | 1.55e-97 | 296 |
| MS.gene072963.t1 | AT1G47210 | 51.504 | 266 | 127 | 1 | 153 | 416 | 95 | 360 | 1.03e-96 | 295 |
| MS.gene072963.t1 | AT1G77390 | 48.377 | 308 | 146 | 3 | 127 | 421 | 134 | 441 | 2.25e-95 | 293 |
| MS.gene072963.t1 | AT1G47220 | 52.672 | 262 | 122 | 1 | 153 | 412 | 49 | 310 | 3.55e-91 | 279 |
| MS.gene072963.t1 | AT1G47230 | 49.624 | 266 | 132 | 1 | 153 | 416 | 88 | 353 | 6.23e-91 | 280 |
| MS.gene072963.t1 | AT1G47230 | 49.438 | 267 | 132 | 2 | 153 | 416 | 88 | 354 | 3.34e-89 | 275 |
| MS.gene072963.t1 | AT1G76310 | 35.142 | 387 | 223 | 11 | 41 | 414 | 54 | 425 | 1.03e-57 | 196 |
| MS.gene072963.t1 | AT5G06150 | 35.561 | 419 | 219 | 16 | 15 | 423 | 58 | 435 | 3.41e-57 | 194 |
| MS.gene072963.t1 | AT1G20610 | 42.128 | 235 | 129 | 3 | 180 | 414 | 197 | 424 | 5.82e-56 | 191 |
| MS.gene072963.t1 | AT1G76310 | 37.026 | 343 | 188 | 11 | 41 | 370 | 54 | 381 | 6.53e-55 | 187 |
| MS.gene072963.t1 | AT3G11520 | 41.961 | 255 | 140 | 4 | 160 | 414 | 159 | 405 | 2.49e-53 | 183 |
| MS.gene072963.t1 | AT2G26760 | 33.962 | 371 | 209 | 11 | 56 | 401 | 6 | 365 | 1.20e-52 | 181 |
| MS.gene072963.t1 | AT3G11520 | 45.740 | 223 | 113 | 4 | 160 | 382 | 159 | 373 | 2.67e-52 | 180 |
| MS.gene072963.t1 | AT1G76310 | 32.771 | 415 | 223 | 12 | 41 | 414 | 54 | 453 | 1.25e-51 | 180 |
| MS.gene072963.t1 | AT1G16330 | 39.216 | 255 | 148 | 3 | 160 | 414 | 395 | 642 | 1.21e-49 | 178 |
| MS.gene072963.t1 | AT4G37490 | 37.931 | 261 | 148 | 7 | 160 | 414 | 165 | 417 | 8.48e-49 | 172 |
| MS.gene072963.t1 | AT2G17620 | 40.385 | 260 | 148 | 3 | 152 | 411 | 163 | 415 | 3.91e-48 | 170 |
| MS.gene072963.t1 | AT4G35620 | 41.036 | 251 | 141 | 3 | 160 | 410 | 172 | 415 | 8.17e-48 | 169 |
| MS.gene072963.t1 | AT4G35620 | 44.444 | 216 | 113 | 3 | 160 | 375 | 172 | 380 | 3.77e-46 | 164 |
| MS.gene072963.t1 | AT1G76310 | 35.154 | 293 | 174 | 7 | 26 | 311 | 45 | 328 | 5.24e-41 | 149 |
| MS.gene072963.t1 | AT5G06150 | 34.853 | 307 | 157 | 13 | 15 | 311 | 58 | 331 | 4.02e-37 | 138 |
| MS.gene072963.t1 | AT1G20590 | 43.312 | 157 | 83 | 2 | 219 | 375 | 63 | 213 | 1.75e-34 | 129 |
| MS.gene072963.t1 | AT1G47210 | 55.102 | 98 | 42 | 1 | 153 | 248 | 95 | 192 | 2.21e-30 | 116 |
| MS.gene072963.t1 | AT1G34460 | 30.942 | 223 | 112 | 6 | 93 | 311 | 214 | 398 | 5.26e-22 | 98.6 |
| MS.gene072963.t1 | AT1G34460 | 30.942 | 223 | 112 | 6 | 93 | 311 | 214 | 398 | 5.26e-22 | 98.6 |
| MS.gene072963.t1 | AT1G34460 | 30.531 | 226 | 112 | 7 | 93 | 311 | 200 | 387 | 1.29e-20 | 94.4 |
| MS.gene072963.t1 | AT1G34460 | 30.531 | 226 | 112 | 7 | 93 | 311 | 214 | 401 | 1.64e-20 | 94.0 |
| MS.gene072963.t1 | AT1G34460 | 30.531 | 226 | 112 | 7 | 93 | 311 | 214 | 401 | 1.64e-20 | 94.0 |
| MS.gene072963.t1 | AT1G34460 | 30.531 | 226 | 112 | 7 | 93 | 311 | 214 | 401 | 1.64e-20 | 94.0 |
| MS.gene072963.t1 | AT1G34460 | 30.531 | 226 | 112 | 7 | 93 | 311 | 214 | 401 | 1.64e-20 | 94.0 |
| MS.gene072963.t1 | AT1G34460 | 30.531 | 226 | 112 | 7 | 93 | 311 | 214 | 401 | 1.80e-20 | 94.0 |
| MS.gene072963.t1 | AT1G34460 | 30.531 | 226 | 112 | 7 | 93 | 311 | 214 | 401 | 2.03e-20 | 94.0 |
| MS.gene072963.t1 | AT1G14750 | 34.969 | 163 | 96 | 4 | 191 | 349 | 384 | 540 | 6.84e-16 | 80.1 |
| MS.gene072963.t1 | AT1G14750 | 34.969 | 163 | 96 | 4 | 191 | 349 | 216 | 372 | 7.51e-16 | 79.3 |
| MS.gene072963.t1 | AT1G14750 | 34.969 | 163 | 96 | 4 | 191 | 349 | 384 | 540 | 8.76e-16 | 80.1 |
| MS.gene072963.t1 | AT1G14750 | 34.969 | 163 | 95 | 5 | 191 | 349 | 216 | 371 | 1.18e-14 | 75.9 |
Find 82 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTAAAGGATTCTCAAATT+TGG | 0.182649 | 3.1:+85693671 | MS.gene072963:intron |
| CAGATCAAGGGCAAAGGTTT+TGG | 0.191093 | 3.1:+85692156 | MS.gene072963:CDS |
| CGAACTTTGTTGTATATATC+AGG | 0.212202 | 3.1:-85693706 | None:intergenic |
| AACAGTGACTGCACCGGTTT+TGG | 0.269524 | 3.1:-85696579 | None:intergenic |
| CTGCAACTTCTCCATGTAAT+TGG | 0.276568 | 3.1:-85694083 | None:intergenic |
| TACATACCTGAGAAATGTTT+TGG | 0.301501 | 3.1:-85695062 | None:intergenic |
| GAGTGGACGCTCTTCATCTT+TGG | 0.302032 | 3.1:-85692125 | None:intergenic |
| TCTTGCTGAACTGGAATTCC+TGG | 0.315133 | 3.1:+85695546 | MS.gene072963:CDS |
| ACCGGTGCAGTCACTGTTCC+AGG | 0.328369 | 3.1:+85696584 | MS.gene072963:CDS |
| ACAGGTTCCTCTTGCTGAAC+TGG | 0.342894 | 3.1:+85695537 | MS.gene072963:intron |
| TTCTCCATGTAATTGGTTGA+TGG | 0.359361 | 3.1:-85694076 | None:intergenic |
| CACCATTGCTGCAGTAACTT+TGG | 0.388234 | 3.1:+85693244 | MS.gene072963:CDS |
| TGCAAGTAACACCAAGCAAC+TGG | 0.415916 | 3.1:-85694535 | None:intergenic |
| CAAAACCTTTGCCCTTGATC+TGG | 0.423251 | 3.1:-85692155 | None:intergenic |
| TCTTCCAGTGCAAGAACAAC+TGG | 0.426769 | 3.1:-85695825 | None:intergenic |
| ACAGTAAGGTAAAGAGTGTC+TGG | 0.432601 | 3.1:-85694461 | None:intergenic |
| AAGAGCAACAGCTTCCAAAA+AGG | 0.433513 | 3.1:+85692207 | MS.gene072963:CDS |
| TGAGTGGTTGAGGGTCCATC+TGG | 0.438657 | 3.1:-85695656 | None:intergenic |
| TGCGTGGAATTCTGATTGAT+TGG | 0.439226 | 3.1:+85694125 | MS.gene072963:CDS |
| ATATATGCAGACTACAACTC+TGG | 0.439974 | 3.1:+85695767 | MS.gene072963:intron |
| GGCAAAACTGTCTCCAAAAC+CGG | 0.446811 | 3.1:+85696566 | MS.gene072963:CDS |
| TAGCTCTGAAGCTTTGTAGT+TGG | 0.450188 | 3.1:-85695799 | None:intergenic |
| AACATGGTCACTTATGTTGT+TGG | 0.450701 | 3.1:-85693294 | None:intergenic |
| ATGGATGTTCTGAGTGGTTG+AGG | 0.460808 | 3.1:-85695666 | None:intergenic |
| CATAAATTTACACTTGAGCC+TGG | 0.467011 | 3.1:-85696602 | None:intergenic |
| CTGCTGTATTCCTTGCCAGA+TGG | 0.472091 | 3.1:+85695641 | MS.gene072963:CDS |
| CCACAACCAAAACATTTCTC+AGG | 0.475913 | 3.1:+85695056 | MS.gene072963:CDS |
| ATCAGAATTCCACGCATGCT+TGG | 0.476428 | 3.1:-85694118 | None:intergenic |
| CACTCAGAATTACCAGATCA+AGG | 0.485115 | 3.1:+85692143 | MS.gene072963:CDS |
| TTGTGCTGATGAAACTTCAA+TGG | 0.487200 | 3.1:-85693159 | None:intergenic |
| GATCAATGAGGTTCACAGTA+AGG | 0.489451 | 3.1:-85694475 | None:intergenic |
| TGCTTCATGTGACAGTTCAA+TGG | 0.489558 | 3.1:+85696540 | MS.gene072963:intron |
| TGTAAGAAGATTGTGCTGCT+TGG | 0.497059 | 3.1:-85695178 | None:intergenic |
| ATGTTCCTCACCGTAAAAGA+AGG | 0.498778 | 3.1:+85692269 | MS.gene072963:CDS |
| AAAACCAGTTGTTCTTGCAC+TGG | 0.503437 | 3.1:+85695821 | MS.gene072963:CDS |
| CCTCACCGTAAAAGAAGGGC+AGG | 0.504738 | 3.1:+85692274 | MS.gene072963:CDS |
| GGTTTCTGAGGAATATAAGC+TGG | 0.509301 | 3.1:+85694436 | MS.gene072963:intron |
| GAACTTTGTTGTATATATCA+GGG | 0.514973 | 3.1:-85693705 | None:intergenic |
| AATTCTGATTGATTGGCTTG+TGG | 0.519075 | 3.1:+85694132 | MS.gene072963:CDS |
| TGAAGTTTCATCAGCACAAG+AGG | 0.526624 | 3.1:+85693163 | MS.gene072963:CDS |
| AGCATGGAGAGAACAACCTT+TGG | 0.528068 | 3.1:-85695862 | None:intergenic |
| TTACTGTGAACCTCATTGAT+CGG | 0.529430 | 3.1:+85694477 | MS.gene072963:CDS |
| TATATTTCTCACGTATAGCA+TGG | 0.531941 | 3.1:-85695878 | None:intergenic |
| TGGATGTTCTGAGTGGTTGA+GGG | 0.532302 | 3.1:-85695665 | None:intergenic |
| TCAACCACTCAGAACATCCA+TGG | 0.534173 | 3.1:+85695668 | MS.gene072963:CDS |
| AAACACAGGCTCCAGTTGCT+TGG | 0.536048 | 3.1:+85694524 | MS.gene072963:CDS |
| AGAATTGTCTACCATAAAGA+TGG | 0.537932 | 3.1:+85693208 | MS.gene072963:CDS |
| GCAGAAGCAGCCACACGAGA+AGG | 0.540170 | 3.1:-85695622 | None:intergenic |
| TTGGACATACAATGTTCAGT+TGG | 0.549012 | 3.1:-85693275 | None:intergenic |
| GGACCCTCTTCGGAAAATGA+AGG | 0.550131 | 3.1:+85692181 | MS.gene072963:CDS |
| AACCAAAGTTACTGCAGCAA+TGG | 0.556672 | 3.1:-85693246 | None:intergenic |
| AAGACCATCAACCAATTACA+TGG | 0.561852 | 3.1:+85694072 | MS.gene072963:CDS |
| CAAGTTTGATTCAGAAACAC+AGG | 0.567317 | 3.1:+85694510 | MS.gene072963:CDS |
| ACAAGAGGATGTTAAAGAGA+AGG | 0.567620 | 3.1:+85693178 | MS.gene072963:CDS |
| AGCAGCACAATCTTCTTACA+AGG | 0.568751 | 3.1:+85695181 | MS.gene072963:CDS |
| GCTCTGCTAAATAATTTGCC+AGG | 0.570353 | 3.1:-85695564 | None:intergenic |
| AACTTTGTTGTATATATCAG+GGG | 0.581055 | 3.1:-85693704 | None:intergenic |
| TGAGAAATATAAACATGAGA+AGG | 0.585853 | 3.1:+85695890 | MS.gene072963:CDS |
| GCCTGGAACAGTGACTGCAC+CGG | 0.595943 | 3.1:-85696585 | None:intergenic |
| GACCCTCTTCGGAAAATGAA+GGG | 0.596652 | 3.1:+85692182 | MS.gene072963:CDS |
| GATCTGCAACTTAATACCAA+AGG | 0.597942 | 3.1:+85695846 | MS.gene072963:CDS |
| ACAGTTTCTACCTTCTCGTG+TGG | 0.603003 | 3.1:+85695612 | MS.gene072963:CDS |
| TCTGATTGATTGGCTTGTGG+AGG | 0.610856 | 3.1:+85694135 | MS.gene072963:CDS |
| TAATACATACACAAAAGAAG+AGG | 0.613454 | 3.1:+85694979 | MS.gene072963:CDS |
| GGTTGAGGGTCCATCTGGCA+AGG | 0.616376 | 3.1:-85695651 | None:intergenic |
| AATTACCAGATCAAGGGCAA+AGG | 0.620424 | 3.1:+85692150 | MS.gene072963:CDS |
| TTGAGAGAAACCGATCAATG+AGG | 0.621952 | 3.1:-85694487 | None:intergenic |
| AGGAATTCCAGTTCAGCAAG+AGG | 0.623808 | 3.1:-85695544 | None:intergenic |
| CAGATAACTGAAAACGCAGA+AGG | 0.624641 | 3.1:-85695030 | None:intergenic |
| ACTCAGAATTACCAGATCAA+GGG | 0.628344 | 3.1:+85692144 | MS.gene072963:CDS |
| AAGCAAAATTCTTCCACTCG+AGG | 0.634099 | 3.1:-85694947 | None:intergenic |
| CAACCACTCAGAACATCCAT+GGG | 0.636239 | 3.1:+85695669 | MS.gene072963:CDS |
| ACATTCTTGCATTGAAAGTG+TGG | 0.640397 | 3.1:-85693327 | None:intergenic |
| TGTTCCTCACCGTAAAAGAA+GGG | 0.641902 | 3.1:+85692270 | MS.gene072963:CDS |
| GATATTTCTCCAAGCATGCG+TGG | 0.654313 | 3.1:+85694109 | MS.gene072963:CDS |
| CTTGATCTGGTAATTCTGAG+TGG | 0.660376 | 3.1:-85692142 | None:intergenic |
| ATACCCATGGATGTTCTGAG+TGG | 0.668616 | 3.1:-85695672 | None:intergenic |
| AGAGATGTGTGCTCCTCGAG+TGG | 0.670751 | 3.1:+85694934 | MS.gene072963:CDS |
| CATGTGACAGTTCAATGGTG+TGG | 0.678244 | 3.1:+85696545 | MS.gene072963:intron |
| GTGTGGTGTCTGTCATAACA+TGG | 0.706964 | 3.1:-85693310 | None:intergenic |
| CTCACCGTAAAAGAAGGGCA+GGG | 0.713304 | 3.1:+85692275 | MS.gene072963:CDS |
| CAACAAAGTTCGAGTCACCG+AGG | 0.719869 | 3.1:+85693717 | MS.gene072963:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATAAAAAAAGTTACT+AGG | + | chr3.1:85693494-85693513 | MS.gene072963:intron | 10.0% |
| !!! | TAATGAAAATTTTATGTTTT+GGG | - | chr3.1:85692784-85692803 | None:intergenic | 10.0% |
| !!! | TATAATTTAAAACATGAATT+TGG | - | chr3.1:85692387-85692406 | None:intergenic | 10.0% |
| !! | GATTGTTTAATAATGAATTA+CGG | - | chr3.1:85693748-85693767 | None:intergenic | 15.0% |
| !! | TATTTATATCTTCTAAACAA+AGG | - | chr3.1:85695722-85695741 | None:intergenic | 15.0% |
| !!! | AATTGGTACATTTTATTTTA+TGG | - | chr3.1:85692678-85692697 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTATATTATCCAA+AGG | - | chr3.1:85693490-85693509 | None:intergenic | 15.0% |
| !!! | CTTTTTTTATATTATCCAAA+GGG | - | chr3.1:85693489-85693508 | None:intergenic | 15.0% |
| !!! | GTAATGAAAATTTTATGTTT+TGG | - | chr3.1:85692785-85692804 | None:intergenic | 15.0% |
| !! | ATCAATATCACCATATAATT+AGG | + | chr3.1:85692406-85692425 | MS.gene072963:intron | 20.0% |
| !! | TATGATAGAATAGAACATTA+TGG | + | chr3.1:85692489-85692508 | MS.gene072963:intron | 20.0% |
| !! | TATTGAAATAAACCTTTGTT+TGG | - | chr3.1:85693386-85693405 | None:intergenic | 20.0% |
| !! | TCTATTCTTAGTACAAAAAT+AGG | - | chr3.1:85693984-85694003 | None:intergenic | 20.0% |
| !!! | AAAACATTGATGATAAGTTT+TGG | + | chr3.1:85694027-85694046 | MS.gene072963:intron | 20.0% |
| !!! | AAATCTTTCTGATAGTTTTT+AGG | - | chr3.1:85692439-85692458 | None:intergenic | 20.0% |
| !!! | AAGATTTGAAATTAATGAGT+TGG | + | chr3.1:85692452-85692471 | MS.gene072963:intron | 20.0% |
| !!! | AATTTAACTTAGTATGTGTT+TGG | + | chr3.1:85695230-85695249 | MS.gene072963:intron | 20.0% |
| !!! | ACTAGTATAAAACATGTTTT+AGG | + | chr3.1:85693423-85693442 | MS.gene072963:intron | 20.0% |
| !!! | CATAGCTTTATTGAAAAAAA+AGG | + | chr3.1:85696488-85696507 | MS.gene072963:intron | 20.0% |
| !!! | CTTTTTTTTCAATAAAGCTA+TGG | - | chr3.1:85696490-85696509 | None:intergenic | 20.0% |
| !!! | GTAAGTACTATTTTTTGTAA+TGG | + | chr3.1:85694571-85694590 | MS.gene072963:intron | 20.0% |
| !!! | TAAACTTTATCTTGTTATAC+AGG | + | chr3.1:85695519-85695538 | MS.gene072963:intron | 20.0% |
| ! | AAAAGAAGAGGTAGTAAAAA+TGG | + | chr3.1:85694991-85695010 | MS.gene072963:CDS | 25.0% |
| ! | AAATTGTAGAATCTCATCTT+AGG | + | chr3.1:85692862-85692881 | MS.gene072963:intron | 25.0% |
| ! | ACTATCATTTCCTAATGATA+TGG | - | chr3.1:85692575-85692594 | None:intergenic | 25.0% |
| ! | ACTTCAACAAACTGTAATTA+AGG | - | chr3.1:85694364-85694383 | None:intergenic | 25.0% |
| ! | AGAATTCTTTGATAAGGTTA+TGG | - | chr3.1:85694228-85694247 | None:intergenic | 25.0% |
| ! | AGTTAAAGGATTCTCAAATT+TGG | + | chr3.1:85693671-85693690 | MS.gene072963:intron | 25.0% |
| ! | ATAGGATATATACAATGTGA+TGG | + | chr3.1:85694284-85694303 | MS.gene072963:intron | 25.0% |
| ! | CAAAAACATAGTTGAATGAT+AGG | + | chr3.1:85694266-85694285 | MS.gene072963:intron | 25.0% |
| ! | CTAAGTTAAATTGTAGATAG+TGG | - | chr3.1:85695222-85695241 | None:intergenic | 25.0% |
| ! | CTGTAAAATGGATAACTAAT+CGG | - | chr3.1:85693090-85693109 | None:intergenic | 25.0% |
| ! | GTACAAAAATAGGATTACTT+TGG | - | chr3.1:85693974-85693993 | None:intergenic | 25.0% |
| ! | TAAAATGTACCAATTGAACT+TGG | + | chr3.1:85692683-85692702 | MS.gene072963:intron | 25.0% |
| ! | TAATACATACACAAAAGAAG+AGG | + | chr3.1:85694979-85694998 | MS.gene072963:CDS | 25.0% |
| ! | TAGACATCGATAAAAGTTAA+AGG | + | chr3.1:85693657-85693676 | MS.gene072963:intron | 25.0% |
| ! | TAGATGAGAATTCTTTGATA+AGG | - | chr3.1:85694234-85694253 | None:intergenic | 25.0% |
| ! | TCCAAATAGTGCTTATAAAT+AGG | + | chr3.1:85696193-85696212 | MS.gene072963:intron | 25.0% |
| ! | TCCTATTTATAAGCACTATT+TGG | - | chr3.1:85696197-85696216 | None:intergenic | 25.0% |
| ! | TGAGAAATATAAACATGAGA+AGG | + | chr3.1:85695890-85695909 | MS.gene072963:CDS | 25.0% |
| ! | TGTCAAAGATGCTTATAAAA+AGG | - | chr3.1:85696000-85696019 | None:intergenic | 25.0% |
| ! | TTGATCTATTATTGTCTTTC+AGG | + | chr3.1:85695147-85695166 | MS.gene072963:intron | 25.0% |
| !! | AACTTTGTTGTATATATCAG+GGG | - | chr3.1:85693707-85693726 | None:intergenic | 25.0% |
| !! | ATGAATTTGGTGACAAAATT+GGG | - | chr3.1:85692374-85692393 | None:intergenic | 25.0% |
| !! | CATAAATATGATTTGTGAGA+AGG | + | chr3.1:85693607-85693626 | MS.gene072963:intron | 25.0% |
| !! | GAACTTTGTTGTATATATCA+GGG | - | chr3.1:85693708-85693727 | None:intergenic | 25.0% |
| !! | TAAAGAGAAAAGTAGCATTT+TGG | - | chr3.1:85694757-85694776 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGACTAAAATA+TGG | + | chr3.1:85692464-85692483 | MS.gene072963:intron | 25.0% |
| !! | TCTTTTTGAACTATGAACTA+AGG | + | chr3.1:85694649-85694668 | MS.gene072963:intron | 25.0% |
| !! | TGTTAAACAATCCAATTTTC+AGG | + | chr3.1:85692341-85692360 | MS.gene072963:intron | 25.0% |
| !! | TTTTCAATAAAGCTATGGAT+AGG | - | chr3.1:85696485-85696504 | None:intergenic | 25.0% |
| !!! | CAACTATGTTTTTGATTGAA+AGG | - | chr3.1:85694260-85694279 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCCCAATATCATT+CGG | + | chr3.1:85694868-85694887 | MS.gene072963:intron | 25.0% |
| !!! | TTAGCTTTGTGTTTTTCTTT+TGG | - | chr3.1:85693127-85693146 | None:intergenic | 25.0% |
| AACATTGGTCAACTGAAAAA+AGG | - | chr3.1:85695936-85695955 | None:intergenic | 30.0% | |
| AAGAATAGAGCAGAATCATT+AGG | + | chr3.1:85693995-85694014 | MS.gene072963:intron | 30.0% | |
| AAGATTGTCCAATAGTTAAG+AGG | + | chr3.1:85692939-85692958 | MS.gene072963:intron | 30.0% | |
| AATAGATTTGCCTTCAAAGT+TGG | + | chr3.1:85692720-85692739 | MS.gene072963:intron | 30.0% | |
| ACTATGAACTAAGGATATCT+AGG | + | chr3.1:85694658-85694677 | MS.gene072963:intron | 30.0% | |
| AGAATTGTCTACCATAAAGA+TGG | + | chr3.1:85693208-85693227 | MS.gene072963:CDS | 30.0% | |
| AGACAACATGACAGTAATTA+TGG | - | chr3.1:85693570-85693589 | None:intergenic | 30.0% | |
| AGGTCTTCTTCCTAATTATA+TGG | - | chr3.1:85692419-85692438 | None:intergenic | 30.0% | |
| ATAGATTTGCCTTCAAAGTT+GGG | + | chr3.1:85692721-85692740 | MS.gene072963:intron | 30.0% | |
| ATCTTAGACCGAATGATATT+GGG | - | chr3.1:85694879-85694898 | None:intergenic | 30.0% | |
| CAAAAGATGTTTCCTCTAAA+GGG | - | chr3.1:85696421-85696440 | None:intergenic | 30.0% | |
| CACTCAATAATTGAGAATGT+TGG | - | chr3.1:85696268-85696287 | None:intergenic | 30.0% | |
| GATTGATCTATCTAGGTAAT+TGG | + | chr3.1:85692625-85692644 | MS.gene072963:intron | 30.0% | |
| GGTGAAATATCTTAGAAGTT+TGG | + | chr3.1:85693541-85693560 | MS.gene072963:intron | 30.0% | |
| GGTTATAGTTGCATTTGAAA+TGG | + | chr3.1:85694333-85694352 | MS.gene072963:intron | 30.0% | |
| GTTGTTATCACCATATCATT+AGG | + | chr3.1:85692562-85692581 | MS.gene072963:intron | 30.0% | |
| TAACTATCACCAAATGCATT+CGG | - | chr3.1:85694815-85694834 | None:intergenic | 30.0% | |
| TACAACTCTTTATGATGATC+AGG | + | chr3.1:85694312-85694331 | MS.gene072963:intron | 30.0% | |
| TAGGAACAGAGATAGTATAT+AGG | + | chr3.1:85696212-85696231 | MS.gene072963:intron | 30.0% | |
| TATATTTCTCACGTATAGCA+TGG | - | chr3.1:85695881-85695900 | None:intergenic | 30.0% | |
| TCAATGTAAGCAAGTATTCT+AGG | + | chr3.1:85693874-85693893 | MS.gene072963:intron | 30.0% | |
| TCATTTAATCCGAATGCATT+TGG | + | chr3.1:85694803-85694822 | MS.gene072963:intron | 30.0% | |
| TGAAAGATGACTTACATTCA+GGG | + | chr3.1:85696157-85696176 | MS.gene072963:intron | 30.0% | |
| TGACATTGCAATTTAGCATA+TGG | - | chr3.1:85693458-85693477 | None:intergenic | 30.0% | |
| TGATAAGGTTATGGACAAAA+AGG | - | chr3.1:85694219-85694238 | None:intergenic | 30.0% | |
| TGGGATTTATACCTGAAAAT+TGG | - | chr3.1:85692355-85692374 | None:intergenic | 30.0% | |
| TGTTTAACACGTTTATCATG+TGG | - | chr3.1:85692330-85692349 | None:intergenic | 30.0% | |
| TTGAAAGATGACTTACATTC+AGG | + | chr3.1:85696156-85696175 | MS.gene072963:intron | 30.0% | |
| ! | AATAAACCTTTGTTTGGACT+TGG | - | chr3.1:85693380-85693399 | None:intergenic | 30.0% |
| ! | AATATGATTTGTGAGAAGGT+AGG | + | chr3.1:85693611-85693630 | MS.gene072963:intron | 30.0% |
| ! | ACTTTTATCGATGTCTACAA+AGG | - | chr3.1:85693654-85693673 | None:intergenic | 30.0% |
| ! | CATGAATTTGGTGACAAAAT+TGG | - | chr3.1:85692375-85692394 | None:intergenic | 30.0% |
| ! | CGAACTTTGTTGTATATATC+AGG | - | chr3.1:85693709-85693728 | None:intergenic | 30.0% |
| ! | TACATACCTGAGAAATGTTT+TGG | - | chr3.1:85695065-85695084 | None:intergenic | 30.0% |
| ! | TTTCTTTTGGTAAACTCCTT+TGG | - | chr3.1:85693114-85693133 | None:intergenic | 30.0% |
| !! | AAGCTATAAATCCTAGCTTT+TGG | - | chr3.1:85695371-85695390 | None:intergenic | 30.0% |
| !! | ATGGATTTTGACATGTTTGA+TGG | + | chr3.1:85695293-85695312 | MS.gene072963:intron | 30.0% |
| !! | CGATTAGTTATCCATTTTAC+AGG | + | chr3.1:85693088-85693107 | MS.gene072963:intron | 30.0% |
| !! | CTATGTTTTTGATTGAAAGG+CGG | - | chr3.1:85694257-85694276 | None:intergenic | 30.0% |
| !! | GACTAGTGGATTTAAAACAT+TGG | - | chr3.1:85695951-85695970 | None:intergenic | 30.0% |
| !! | TTTTGACTCTACCATCTTTA+TGG | - | chr3.1:85693222-85693241 | None:intergenic | 30.0% |
| !!! | AAGCTTTTTTCAACTAAGTG+GGG | - | chr3.1:85692538-85692557 | None:intergenic | 30.0% |
| !!! | ACTATTTTTTGTAATGGTCC+TGG | + | chr3.1:85694577-85694596 | MS.gene072963:intron | 30.0% |
| !!! | CAAGCTTTTTTCAACTAAGT+GGG | - | chr3.1:85692539-85692558 | None:intergenic | 30.0% |
| AACATGGTCACTTATGTTGT+TGG | - | chr3.1:85693297-85693316 | None:intergenic | 35.0% | |
| AAGACCATCAACCAATTACA+TGG | + | chr3.1:85694072-85694091 | MS.gene072963:CDS | 35.0% | |
| AATGAATTACGGACAAACCT+CGG | - | chr3.1:85693737-85693756 | None:intergenic | 35.0% | |
| AATGTCATAAGATTGCCCTT+TGG | + | chr3.1:85693471-85693490 | MS.gene072963:intron | 35.0% | |
| ACAAGAGGATGTTAAAGAGA+AGG | + | chr3.1:85693178-85693197 | MS.gene072963:CDS | 35.0% | |
| ACATGCAGATTGATCTATCT+AGG | + | chr3.1:85692618-85692637 | MS.gene072963:intron | 35.0% | |
| ACATTCTTGCATTGAAAGTG+TGG | - | chr3.1:85693330-85693349 | None:intergenic | 35.0% | |
| ACTCAGAATTACCAGATCAA+GGG | + | chr3.1:85692144-85692163 | MS.gene072963:CDS | 35.0% | |
| ACTTACATACCCAACTTTGA+AGG | - | chr3.1:85692733-85692752 | None:intergenic | 35.0% | |
| AGAATTCTAACTCTGAGCAA+CGG | - | chr3.1:85694616-85694635 | None:intergenic | 35.0% | |
| AGAGGTAGTAAAAATGGAGA+AGG | + | chr3.1:85694997-85695016 | MS.gene072963:CDS | 35.0% | |
| AGTGATTCTAACCAAAAGCT+AGG | + | chr3.1:85695357-85695376 | MS.gene072963:intron | 35.0% | |
| AGTTGTATTGTACCCTTTAG+AGG | + | chr3.1:85696406-85696425 | MS.gene072963:intron | 35.0% | |
| ATATATGCAGACTACAACTC+TGG | + | chr3.1:85695767-85695786 | MS.gene072963:intron | 35.0% | |
| ATTATGGCGTAATTTGATCC+TGG | + | chr3.1:85692505-85692524 | MS.gene072963:intron | 35.0% | |
| CAAGTTTGATTCAGAAACAC+AGG | + | chr3.1:85694510-85694529 | MS.gene072963:CDS | 35.0% | |
| CATCTTAGACCGAATGATAT+TGG | - | chr3.1:85694880-85694899 | None:intergenic | 35.0% | |
| CCACTTAGTTGAAAAAAGCT+TGG | + | chr3.1:85692537-85692556 | MS.gene072963:intron | 35.0% | |
| CTAACCTACTCTCTTTACTA+GGG | - | chr3.1:85692915-85692934 | None:intergenic | 35.0% | |
| GATCTGCAACTTAATACCAA+AGG | + | chr3.1:85695846-85695865 | MS.gene072963:CDS | 35.0% | |
| GCAAAAGATGTTTCCTCTAA+AGG | - | chr3.1:85696422-85696441 | None:intergenic | 35.0% | |
| TAGTCAACATTTCATACCCA+TGG | - | chr3.1:85695688-85695707 | None:intergenic | 35.0% | |
| TATTCCTCAGAAACCTGAAA+AGG | - | chr3.1:85694431-85694450 | None:intergenic | 35.0% | |
| TCAGAAACCTGAAAAGGAAT+AGG | - | chr3.1:85694425-85694444 | None:intergenic | 35.0% | |
| TCTAACCTACTCTCTTTACT+AGG | - | chr3.1:85692916-85692935 | None:intergenic | 35.0% | |
| TCTCTTCACCTCTTAACTAT+TGG | - | chr3.1:85692950-85692969 | None:intergenic | 35.0% | |
| TCTGATTGAGGTTCATAAAC+CGG | + | chr3.1:85696443-85696462 | MS.gene072963:intron | 35.0% | |
| TGCAAAATGAAATATGCTCC+TGG | - | chr3.1:85693904-85693923 | None:intergenic | 35.0% | |
| TTACTGTGAACCTCATTGAT+CGG | + | chr3.1:85694477-85694496 | MS.gene072963:CDS | 35.0% | |
| TTCTCCATGTAATTGGTTGA+TGG | - | chr3.1:85694079-85694098 | None:intergenic | 35.0% | |
| TTGGACATACAATGTTCAGT+TGG | - | chr3.1:85693278-85693297 | None:intergenic | 35.0% | |
| TTGGTTAGAATCACTTCTTG+AGG | - | chr3.1:85695352-85695371 | None:intergenic | 35.0% | |
| TTGTAGAATCTCATCTTAGG+TGG | + | chr3.1:85692865-85692884 | MS.gene072963:intron | 35.0% | |
| ! | ACATCTTTTGCATCTGATTG+AGG | + | chr3.1:85696431-85696450 | MS.gene072963:intron | 35.0% |
| ! | AGATGCACTTCTTTTCTTCA+TGG | + | chr3.1:85694895-85694914 | MS.gene072963:intron | 35.0% |
| ! | CTCAGAAGAAACAACCTTTT+TGG | - | chr3.1:85692224-85692243 | None:intergenic | 35.0% |
| ! | TCTAAAGGGTACAATACAAC+TGG | - | chr3.1:85696407-85696426 | None:intergenic | 35.0% |
| ! | TTACCATCAAGCTTTTGTTG+TGG | + | chr3.1:85694384-85694403 | MS.gene072963:intron | 35.0% |
| ! | TTAGTATGTGTTTGGTTTCG+TGG | + | chr3.1:85695238-85695257 | MS.gene072963:intron | 35.0% |
| ! | TTATCCATTTTACAGGCCAA+AGG | + | chr3.1:85693095-85693114 | MS.gene072963:intron | 35.0% |
| ! | TTGTGCTGATGAAACTTCAA+TGG | - | chr3.1:85693162-85693181 | None:intergenic | 35.0% |
| !! | AAGTGGTTCTAGACACAAAA+TGG | + | chr3.1:85695274-85695293 | MS.gene072963:intron | 35.0% |
| !! | AATTCTGATTGATTGGCTTG+TGG | + | chr3.1:85694132-85694151 | MS.gene072963:CDS | 35.0% |
| !! | AGGACAGCATATTATTTTGC+CGG | - | chr3.1:85696465-85696484 | None:intergenic | 35.0% |
| !! | CTGGATTATTTTATGCTGAC+AGG | + | chr3.1:85695476-85695495 | MS.gene072963:intron | 35.0% |
| !! | TTTGTGTCTAGAACCACTTT+TGG | - | chr3.1:85695273-85695292 | None:intergenic | 35.0% |
| !! | TTTTGTTGTGGCTTTGCTAA+AGG | + | chr3.1:85694396-85694415 | MS.gene072963:intron | 35.0% |
| !!! | CCAAGCTTTTTTCAACTAAG+TGG | - | chr3.1:85692540-85692559 | None:intergenic | 35.0% |
| !!! | CTGAGAAATGTTTTGGTTGT+GGG | - | chr3.1:85695058-85695077 | None:intergenic | 35.0% |
| !!! | TATTCCTTTTCAGGTTTCTG+AGG | + | chr3.1:85694424-85694443 | MS.gene072963:intron | 35.0% |
| !!! | TTTTTTCAACTAAGTGGGGT+CGG | - | chr3.1:85692534-85692553 | None:intergenic | 35.0% |
| AAAACCAGTTGTTCTTGCAC+TGG | + | chr3.1:85695821-85695840 | MS.gene072963:CDS | 40.0% | |
| AACCAAAGTTACTGCAGCAA+TGG | - | chr3.1:85693249-85693268 | None:intergenic | 40.0% | |
| AACGGGAACTTATGTTAACC+AGG | - | chr3.1:85694598-85694617 | None:intergenic | 40.0% | |
| AACTCCTTTGGCCTGTAAAA+TGG | - | chr3.1:85693102-85693121 | None:intergenic | 40.0% | |
| AAGAGCAACAGCTTCCAAAA+AGG | + | chr3.1:85692207-85692226 | MS.gene072963:CDS | 40.0% | |
| AAGCAAAATTCTTCCACTCG+AGG | - | chr3.1:85694950-85694969 | None:intergenic | 40.0% | |
| AAGCCACAACAAAAGCTTGA+TGG | - | chr3.1:85694390-85694409 | None:intergenic | 40.0% | |
| AAGCCACTAACTCACTAGAA+AGG | + | chr3.1:85693520-85693539 | MS.gene072963:intron | 40.0% | |
| AAGTCAGCTGAAATTGCTAG+AGG | + | chr3.1:85692749-85692768 | MS.gene072963:intron | 40.0% | |
| AATTACCAGATCAAGGGCAA+AGG | + | chr3.1:85692150-85692169 | MS.gene072963:CDS | 40.0% | |
| ACAGTAAACTGAGGATCGAA+AGG | - | chr3.1:85694716-85694735 | None:intergenic | 40.0% | |
| AGCAGCACAATCTTCTTACA+AGG | + | chr3.1:85695181-85695200 | MS.gene072963:CDS | 40.0% | |
| AGTCAGCTGAAATTGCTAGA+GGG | + | chr3.1:85692750-85692769 | MS.gene072963:intron | 40.0% | |
| ATCATCTCCACAGTAAACTG+AGG | - | chr3.1:85694725-85694744 | None:intergenic | 40.0% | |
| ATGCAAGAATGTGTGAACTC+TGG | + | chr3.1:85693338-85693357 | MS.gene072963:intron | 40.0% | |
| ATGTTCCTCACCGTAAAAGA+AGG | + | chr3.1:85692269-85692288 | MS.gene072963:CDS | 40.0% | |
| CACTCAGAATTACCAGATCA+AGG | + | chr3.1:85692143-85692162 | MS.gene072963:CDS | 40.0% | |
| CACTGAAAATGCTACTCCAT+CGG | + | chr3.1:85695972-85695991 | MS.gene072963:intron | 40.0% | |
| CAGATAACTGAAAACGCAGA+AGG | - | chr3.1:85695033-85695052 | None:intergenic | 40.0% | |
| CATTGCAAAATCAAACACGC+TGG | + | chr3.1:85695457-85695476 | MS.gene072963:intron | 40.0% | |
| CCACAACCAAAACATTTCTC+AGG | + | chr3.1:85695056-85695075 | MS.gene072963:CDS | 40.0% | |
| CTGCAACTTCTCCATGTAAT+TGG | - | chr3.1:85694086-85694105 | None:intergenic | 40.0% | |
| CTTGATCTGGTAATTCTGAG+TGG | - | chr3.1:85692145-85692164 | None:intergenic | 40.0% | |
| GAATTCTAACTCTGAGCAAC+GGG | - | chr3.1:85694615-85694634 | None:intergenic | 40.0% | |
| GATCAATGAGGTTCACAGTA+AGG | - | chr3.1:85694478-85694497 | None:intergenic | 40.0% | |
| GTGGTAGAGATAACCAAAAG+TGG | + | chr3.1:85695257-85695276 | MS.gene072963:intron | 40.0% | |
| TATCGATGTCTACAAAGGTC+AGG | - | chr3.1:85693649-85693668 | None:intergenic | 40.0% | |
| TGAAGTTTCATCAGCACAAG+AGG | + | chr3.1:85693163-85693182 | MS.gene072963:CDS | 40.0% | |
| TGCGTGGAATTCTGATTGAT+TGG | + | chr3.1:85694125-85694144 | MS.gene072963:CDS | 40.0% | |
| TGCTTCATGTGACAGTTCAA+TGG | + | chr3.1:85696540-85696559 | MS.gene072963:intron | 40.0% | |
| TGTTCCTCACCGTAAAAGAA+GGG | + | chr3.1:85692270-85692289 | MS.gene072963:CDS | 40.0% | |
| TTGAGAGAAACCGATCAATG+AGG | - | chr3.1:85694490-85694509 | None:intergenic | 40.0% | |
| TTTCGATCCTCAGTTTACTG+TGG | + | chr3.1:85694715-85694734 | MS.gene072963:intron | 40.0% | |
| TTTGCTCGACCAAGTTCAAT+TGG | - | chr3.1:85692695-85692714 | None:intergenic | 40.0% | |
| ! | AGATCAAGGGCAAAGGTTTT+GGG | + | chr3.1:85692157-85692176 | MS.gene072963:CDS | 40.0% |
| ! | AGCATTTTCAGTGTGACTAG+TGG | - | chr3.1:85695965-85695984 | None:intergenic | 40.0% |
| ! | GCTCTGCTAAATAATTTGCC+AGG | - | chr3.1:85695567-85695586 | None:intergenic | 40.0% |
| ! | GGTTTCTGAGGAATATAAGC+TGG | + | chr3.1:85694436-85694455 | MS.gene072963:intron | 40.0% |
| ! | TCACCTTTCTAGTGAGTTAG+TGG | - | chr3.1:85693526-85693545 | None:intergenic | 40.0% |
| ! | TGTAAGAAGATTGTGCTGCT+TGG | - | chr3.1:85695181-85695200 | None:intergenic | 40.0% |
| ! | TTCCCTTCATTTTCCGAAGA+GGG | - | chr3.1:85692187-85692206 | None:intergenic | 40.0% |
| ! | TTTCCCTTCATTTTCCGAAG+AGG | - | chr3.1:85692188-85692207 | None:intergenic | 40.0% |
| !! | AAGGTGTCCTATTCCTTTTC+AGG | + | chr3.1:85694415-85694434 | MS.gene072963:intron | 40.0% |
| !! | ACAGTAAGGTAAAGAGTGTC+TGG | - | chr3.1:85694464-85694483 | None:intergenic | 40.0% |
| !! | TAGCTCTGAAGCTTTGTAGT+TGG | - | chr3.1:85695802-85695821 | None:intergenic | 40.0% |
| !! | TGCTTATAAAAAGGCACCGA+TGG | - | chr3.1:85695991-85696010 | None:intergenic | 40.0% |
| !! | TGGAGAAGTACTTGTACACA+CGG | - | chr3.1:85696387-85696406 | None:intergenic | 40.0% |
| !!! | CCTGAGAAATGTTTTGGTTG+TGG | - | chr3.1:85695059-85695078 | None:intergenic | 40.0% |
| ACAGTTTCTACCTTCTCGTG+TGG | + | chr3.1:85695612-85695631 | MS.gene072963:CDS | 45.0% | |
| ACCTCTCCAAGTCCAAACAA+AGG | + | chr3.1:85693371-85693390 | MS.gene072963:intron | 45.0% | |
| AGCATGGAGAGAACAACCTT+TGG | - | chr3.1:85695865-85695884 | None:intergenic | 45.0% | |
| AGGAATTCCAGTTCAGCAAG+AGG | - | chr3.1:85695547-85695566 | None:intergenic | 45.0% | |
| ATCAGAATTCCACGCATGCT+TGG | - | chr3.1:85694121-85694140 | None:intergenic | 45.0% | |
| CAAAACCTTTGCCCTTGATC+TGG | - | chr3.1:85692158-85692177 | None:intergenic | 45.0% | |
| CAACCACTCAGAACATCCAT+GGG | + | chr3.1:85695669-85695688 | MS.gene072963:CDS | 45.0% | |
| CACCATTGCTGCAGTAACTT+TGG | + | chr3.1:85693244-85693263 | MS.gene072963:CDS | 45.0% | |
| CATGTGACAGTTCAATGGTG+TGG | + | chr3.1:85696545-85696564 | MS.gene072963:intron | 45.0% | |
| GACCCTCTTCGGAAAATGAA+GGG | + | chr3.1:85692182-85692201 | MS.gene072963:CDS | 45.0% | |
| GAGACCCTAGTAAAGAGAGT+AGG | + | chr3.1:85692908-85692927 | MS.gene072963:intron | 45.0% | |
| GATATTTCTCCAAGCATGCG+TGG | + | chr3.1:85694109-85694128 | MS.gene072963:CDS | 45.0% | |
| GGCAAAACTGTCTCCAAAAC+CGG | + | chr3.1:85696566-85696585 | MS.gene072963:CDS | 45.0% | |
| GTCAGCTGAAATTGCTAGAG+GGG | + | chr3.1:85692751-85692770 | MS.gene072963:intron | 45.0% | |
| GTGTGGTGTCTGTCATAACA+TGG | - | chr3.1:85693313-85693332 | None:intergenic | 45.0% | |
| TCAACCACTCAGAACATCCA+TGG | + | chr3.1:85695668-85695687 | MS.gene072963:CDS | 45.0% | |
| TCTTCCAGTGCAAGAACAAC+TGG | - | chr3.1:85695828-85695847 | None:intergenic | 45.0% | |
| TCTTGCTGAACTGGAATTCC+TGG | + | chr3.1:85695546-85695565 | MS.gene072963:CDS | 45.0% | |
| TGCAAGTAACACCAAGCAAC+TGG | - | chr3.1:85694538-85694557 | None:intergenic | 45.0% | |
| TTAGGTGGTAGAGACATGTG+TGG | + | chr3.1:85692880-85692899 | MS.gene072963:intron | 45.0% | |
| ! | ACCTTTGTTTGGACTTGGAG+AGG | - | chr3.1:85693375-85693394 | None:intergenic | 45.0% |
| ! | ATACCCATGGATGTTCTGAG+TGG | - | chr3.1:85695675-85695694 | None:intergenic | 45.0% |
| ! | ATGGATGTTCTGAGTGGTTG+AGG | - | chr3.1:85695669-85695688 | None:intergenic | 45.0% |
| ! | CAGATCAAGGGCAAAGGTTT+TGG | + | chr3.1:85692156-85692175 | MS.gene072963:CDS | 45.0% |
| ! | CTTTTACGGTGAGGAACATC+AGG | - | chr3.1:85692268-85692287 | None:intergenic | 45.0% |
| ! | TAAGCCCTGCCCTTCTTTTA+CGG | - | chr3.1:85692282-85692301 | None:intergenic | 45.0% |
| ! | TGGATGTTCTGAGTGGTTGA+GGG | - | chr3.1:85695668-85695687 | None:intergenic | 45.0% |
| !! | GCAAGTATTCTAGGATAGCC+AGG | + | chr3.1:85693883-85693902 | MS.gene072963:intron | 45.0% |
| !! | TCTGATTGATTGGCTTGTGG+AGG | + | chr3.1:85694135-85694154 | MS.gene072963:CDS | 45.0% |
| !! | ATTATTATTACTTTATAATA+GGG | + | chr3.1:85693828-85693847 | MS.gene072963:intron | 5.0% |
| !! | TATTATTATTACTTTATAAT+AGG | + | chr3.1:85693827-85693846 | MS.gene072963:intron | 5.0% |
| AAACACAGGCTCCAGTTGCT+TGG | + | chr3.1:85694524-85694543 | MS.gene072963:CDS | 50.0% | |
| ACAGGTTCCTCTTGCTGAAC+TGG | + | chr3.1:85695537-85695556 | MS.gene072963:intron | 50.0% | |
| CAACAAAGTTCGAGTCACCG+AGG | + | chr3.1:85693717-85693736 | MS.gene072963:CDS | 50.0% | |
| CTCACCGTAAAAGAAGGGCA+GGG | + | chr3.1:85692275-85692294 | MS.gene072963:CDS | 50.0% | |
| CTGCTGTATTCCTTGCCAGA+TGG | + | chr3.1:85695641-85695660 | MS.gene072963:CDS | 50.0% | |
| GAGTGGACGCTCTTCATCTT+TGG | - | chr3.1:85692128-85692147 | None:intergenic | 50.0% | |
| GGACCCTCTTCGGAAAATGA+AGG | + | chr3.1:85692181-85692200 | MS.gene072963:CDS | 50.0% | |
| TTGTGAGAAGGTAGGAGCCT+CGG | + | chr3.1:85693619-85693638 | MS.gene072963:intron | 50.0% | |
| !!! | AACAGTGACTGCACCGGTTT+TGG | - | chr3.1:85696582-85696601 | None:intergenic | 50.0% |
| !!! | TCAAGGGCAAAGGTTTTGGG+AGG | + | chr3.1:85692160-85692179 | MS.gene072963:CDS | 50.0% |
| AGAGATGTGTGCTCCTCGAG+TGG | + | chr3.1:85694934-85694953 | MS.gene072963:CDS | 55.0% | |
| CCTCACCGTAAAAGAAGGGC+AGG | + | chr3.1:85692274-85692293 | MS.gene072963:CDS | 55.0% | |
| GCTTGTGGAGGTCAGTCTTG+TGG | + | chr3.1:85694147-85694166 | MS.gene072963:intron | 55.0% | |
| TACAAAGGTCAGGCGATCCG+AGG | - | chr3.1:85693639-85693658 | None:intergenic | 55.0% | |
| TGAGTGGTTGAGGGTCCATC+TGG | - | chr3.1:85695659-85695678 | None:intergenic | 55.0% | |
| ! | CCTGCCCTTCTTTTACGGTG+AGG | - | chr3.1:85692277-85692296 | None:intergenic | 55.0% |
| ! | GGAGGTCAGTCTTGTGGCAT+TGG | + | chr3.1:85694153-85694172 | MS.gene072963:intron | 55.0% |
| !!! | GGTTTTGGGAGGACCCTCTT+CGG | + | chr3.1:85692171-85692190 | MS.gene072963:CDS | 55.0% |
| ACCGGTGCAGTCACTGTTCC+AGG | + | chr3.1:85696584-85696603 | MS.gene072963:CDS | 60.0% | |
| ACTAAGTGGGGTCGGCTACC+AGG | - | chr3.1:85692526-85692545 | None:intergenic | 60.0% | |
| GCAGAAGCAGCCACACGAGA+AGG | - | chr3.1:85695625-85695644 | None:intergenic | 60.0% | |
| GCCTGGAACAGTGACTGCAC+CGG | - | chr3.1:85696588-85696607 | None:intergenic | 60.0% | |
| GGTTGAGGGTCCATCTGGCA+AGG | - | chr3.1:85695654-85695673 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 85692097 | 85696617 | 85692097 | ID=MS.gene072963 |
| chr3.1 | mRNA | 85692097 | 85696617 | 85692097 | ID=MS.gene072963.t1;Parent=MS.gene072963 |
| chr3.1 | exon | 85692097 | 85692306 | 85692097 | ID=MS.gene072963.t1.exon1;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85692097 | 85692306 | 85692097 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| chr3.1 | exon | 85693110 | 85693349 | 85693110 | ID=MS.gene072963.t1.exon2;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85693110 | 85693349 | 85693110 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| chr3.1 | exon | 85693673 | 85693738 | 85693673 | ID=MS.gene072963.t1.exon3;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85693673 | 85693738 | 85693673 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| chr3.1 | exon | 85694064 | 85694156 | 85694064 | ID=MS.gene072963.t1.exon4;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85694064 | 85694156 | 85694064 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| chr3.1 | exon | 85694437 | 85694570 | 85694437 | ID=MS.gene072963.t1.exon5;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85694437 | 85694570 | 85694437 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| chr3.1 | exon | 85694925 | 85695077 | 85694925 | ID=MS.gene072963.t1.exon6;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85694925 | 85695077 | 85694925 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| chr3.1 | exon | 85695169 | 85695202 | 85695169 | ID=MS.gene072963.t1.exon7;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85695169 | 85695202 | 85695169 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| chr3.1 | exon | 85695541 | 85695690 | 85695541 | ID=MS.gene072963.t1.exon8;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85695541 | 85695690 | 85695541 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| chr3.1 | exon | 85695777 | 85695911 | 85695777 | ID=MS.gene072963.t1.exon9;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85695777 | 85695911 | 85695777 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| chr3.1 | exon | 85696555 | 85696617 | 85696555 | ID=MS.gene072963.t1.exon10;Parent=MS.gene072963.t1 |
| chr3.1 | CDS | 85696555 | 85696617 | 85696555 | ID=cds.MS.gene072963.t1;Parent=MS.gene072963.t1 |
| Gene Sequence |
| Protein sequence |
