Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065949.t1 | XP_024638161.1 | 97.3 | 372 | 10 | 0 | 1 | 372 | 1 | 372 | 1.70E-206 | 728.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065949.t1 | Q9LDC0 | 68.6 | 373 | 107 | 4 | 1 | 371 | 1 | 365 | 7.2e-142 | 505.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065949.t1 | G7JTJ9 | 97.3 | 372 | 10 | 0 | 1 | 372 | 1 | 372 | 1.2e-206 | 728.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049567 | MS.gene065949 | 0.815094 | 1.10E-51 | -1.69E-46 |
| MS.gene049825 | MS.gene065949 | 0.812745 | 3.63E-51 | -1.69E-46 |
| MS.gene050201 | MS.gene065949 | 0.808525 | 2.97E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene065949 | 0.8125 | 4.11E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene065949 | 0.812076 | 5.09E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene065949 | 0.837336 | 5.52E-57 | -1.69E-46 |
| MS.gene050721 | MS.gene065949 | 0.834986 | 2.18E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene065949 | 0.802425 | 5.64E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene065949 | 0.82615 | 3.18E-54 | -1.69E-46 |
| MS.gene051207 | MS.gene065949 | 0.804225 | 2.39E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene065949 | 0.820832 | 5.57E-53 | -1.69E-46 |
| MS.gene052176 | MS.gene065949 | 0.83198 | 1.23E-55 | -1.69E-46 |
| MS.gene052358 | MS.gene065949 | -0.83109 | 2.03E-55 | -1.69E-46 |
| MS.gene052376 | MS.gene065949 | 0.808806 | 2.58E-50 | -1.69E-46 |
| MS.gene052746 | MS.gene065949 | 0.80502 | 1.63E-49 | -1.69E-46 |
| MS.gene053294 | MS.gene065949 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene065949 | 0.816542 | 5.24E-52 | -1.69E-46 |
| MS.gene054576 | MS.gene065949 | 0.82552 | 4.48E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene065949 | 0.801908 | 7.21E-49 | -1.69E-46 |
| MS.gene055808 | MS.gene065949 | 0.800836 | 1.20E-48 | -1.69E-46 |
| MS.gene056091 | MS.gene065949 | 0.82793 | 1.19E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene065949 | 0.808248 | 3.40E-50 | -1.69E-46 |
| MS.gene056638 | MS.gene065949 | 0.821431 | 4.05E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene065949 | 0.842686 | 2.22E-58 | -1.69E-46 |
| MS.gene05795 | MS.gene065949 | 0.800614 | 1.33E-48 | -1.69E-46 |
| MS.gene058037 | MS.gene065949 | 0.800216 | 1.60E-48 | -1.69E-46 |
| MS.gene058635 | MS.gene065949 | 0.822229 | 2.65E-53 | -1.69E-46 |
| MS.gene058911 | MS.gene065949 | 0.804172 | 2.45E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene065949 | 0.832846 | 7.49E-56 | -1.69E-46 |
| MS.gene060572 | MS.gene065949 | 0.831298 | 1.81E-55 | -1.69E-46 |
| MS.gene060586 | MS.gene065949 | 0.809078 | 2.26E-50 | -1.69E-46 |
| MS.gene060879 | MS.gene065949 | 0.806079 | 9.79E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene065949 | -0.819564 | 1.09E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065949.t1 | MTR_4g039430 | 97.312 | 372 | 10 | 0 | 1 | 372 | 1 | 372 | 0.0 | 758 |
| MS.gene065949.t1 | MTR_8g080980 | 33.692 | 279 | 177 | 5 | 55 | 331 | 271 | 543 | 1.33e-33 | 131 |
| MS.gene065949.t1 | MTR_7g053470 | 32.384 | 281 | 184 | 3 | 55 | 334 | 267 | 542 | 2.94e-33 | 130 |
| MS.gene065949.t1 | MTR_8g012340 | 36.726 | 226 | 137 | 4 | 107 | 331 | 327 | 547 | 3.09e-31 | 124 |
| MS.gene065949.t1 | MTR_1g017870 | 30.195 | 308 | 196 | 9 | 37 | 338 | 44 | 338 | 1.73e-28 | 114 |
| MS.gene065949.t1 | MTR_1g017870 | 31.228 | 285 | 180 | 8 | 56 | 334 | 60 | 334 | 2.66e-28 | 114 |
| MS.gene065949.t1 | MTR_1g017870 | 30.195 | 308 | 196 | 9 | 37 | 338 | 128 | 422 | 1.07e-27 | 113 |
| MS.gene065949.t1 | MTR_1g017870 | 30.592 | 304 | 192 | 9 | 37 | 334 | 128 | 418 | 1.21e-27 | 113 |
| MS.gene065949.t1 | MTR_1g017870 | 31.228 | 285 | 180 | 8 | 56 | 334 | 270 | 544 | 1.58e-27 | 114 |
| MS.gene065949.t1 | MTR_1g017870 | 31.228 | 285 | 180 | 8 | 56 | 334 | 270 | 544 | 1.76e-27 | 114 |
| MS.gene065949.t1 | MTR_1g017870 | 31.228 | 285 | 180 | 8 | 56 | 334 | 246 | 520 | 2.00e-27 | 113 |
| MS.gene065949.t1 | MTR_4g055500 | 29.118 | 340 | 198 | 14 | 22 | 335 | 230 | 552 | 8.55e-21 | 94.4 |
| MS.gene065949.t1 | MTR_8g010620 | 32.215 | 149 | 94 | 4 | 107 | 254 | 130 | 272 | 7.88e-14 | 72.0 |
| MS.gene065949.t1 | MTR_8g010620 | 28.358 | 201 | 134 | 6 | 58 | 254 | 145 | 339 | 1.26e-13 | 72.0 |
| MS.gene065949.t1 | MTR_8g010620 | 28.358 | 201 | 134 | 6 | 58 | 254 | 181 | 375 | 1.83e-13 | 71.6 |
| MS.gene065949.t1 | MTR_8g010620 | 28.358 | 201 | 134 | 6 | 58 | 254 | 206 | 400 | 2.15e-13 | 71.6 |
| MS.gene065949.t1 | MTR_8g011560 | 31.544 | 149 | 95 | 4 | 107 | 254 | 62 | 204 | 7.58e-13 | 68.2 |
| MS.gene065949.t1 | MTR_7g059150 | 30.303 | 132 | 82 | 1 | 181 | 312 | 92 | 213 | 1.61e-11 | 64.7 |
| MS.gene065949.t1 | MTR_8g011100 | 30.872 | 149 | 96 | 3 | 107 | 254 | 244 | 386 | 3.11e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065949.t1 | AT3G21640 | 68.633 | 373 | 107 | 4 | 1 | 371 | 1 | 365 | 0.0 | 527 |
| MS.gene065949.t1 | AT5G48570 | 33.446 | 296 | 182 | 8 | 49 | 337 | 274 | 561 | 1.50e-31 | 125 |
| MS.gene065949.t1 | AT3G25230 | 31.615 | 291 | 168 | 7 | 55 | 331 | 272 | 545 | 8.50e-30 | 120 |
| MS.gene065949.t1 | AT3G25230 | 31.615 | 291 | 168 | 7 | 55 | 331 | 272 | 545 | 1.08e-29 | 120 |
| MS.gene065949.t1 | AT3G54010 | 30.094 | 319 | 177 | 13 | 45 | 335 | 160 | 460 | 1.61e-21 | 96.3 |
| MS.gene065949.t1 | AT3G54010 | 30.094 | 319 | 177 | 13 | 45 | 335 | 250 | 550 | 1.66e-21 | 96.7 |
| MS.gene065949.t1 | AT1G58450 | 32.716 | 162 | 98 | 5 | 175 | 332 | 1 | 155 | 1.16e-12 | 65.9 |
Find 92 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGGAAATGTTCTGTTTC+AGG | 0.222182 | 4.4:-65547334 | MS.gene065949:CDS |
| GAGATCTATAAAGGAATATT+TGG | 0.225703 | 4.4:-65545568 | MS.gene065949:CDS |
| GCAATTTGAAGGCTTTATTT+AGG | 0.233759 | 4.4:-65545741 | MS.gene065949:CDS |
| TCAACTTCAGAATCAACTTT+TGG | 0.240967 | 4.4:+65548979 | None:intergenic |
| TGTGGTACTGGTTCAGGTCT+TGG | 0.262790 | 4.4:+65545544 | None:intergenic |
| CTTGCAATTGCTTTATCTTC+AGG | 0.277406 | 4.4:+65545643 | None:intergenic |
| GACTTCATGTTCCAGTTGTT+TGG | 0.278250 | 4.4:-65547131 | MS.gene065949:CDS |
| TCTGCCATTGGTGGAACATT+TGG | 0.294220 | 4.4:+65547534 | None:intergenic |
| GGTTACAAAACAAATTATTA+AGG | 0.302747 | 4.4:-65548941 | MS.gene065949:CDS |
| TTATGGTGGTAGTCCATTAC+AGG | 0.321001 | 4.4:-65548543 | MS.gene065949:intron |
| CCAGTTGTTTGGGAAGTATA+GGG | 0.330723 | 4.4:-65547120 | MS.gene065949:CDS |
| AAATGACTGGCTTGGGCATT+GGG | 0.332295 | 4.4:-65547641 | MS.gene065949:CDS |
| CTGCGTGTGAGCTGGGAATT+AGG | 0.336747 | 4.4:-65547585 | MS.gene065949:CDS |
| CGACCAATTGAGATGGTAAT+AGG | 0.338090 | 4.4:-65548469 | MS.gene065949:CDS |
| GTTTGGGAAGTATAGGGATA+TGG | 0.339954 | 4.4:-65547114 | MS.gene065949:CDS |
| ACTTCATGTTCCAGTTGTTT+GGG | 0.360386 | 4.4:-65547130 | MS.gene065949:CDS |
| CCCTATACTTCCCAAACAAC+TGG | 0.377001 | 4.4:+65547120 | None:intergenic |
| GGAATTGGTTCATATTTGTT+TGG | 0.380589 | 4.4:-65545516 | MS.gene065949:CDS |
| GTTTATGAAGTTGAGCTCAT+TGG | 0.387560 | 4.4:-65547507 | MS.gene065949:CDS |
| GGACTACTCAATAATTCTTC+AGG | 0.387637 | 4.4:+65549003 | None:intergenic |
| AAGCAGAAGGAGATCTATAA+AGG | 0.387775 | 4.4:-65545577 | MS.gene065949:CDS |
| TCCAGTTGTTTGGGAAGTAT+AGG | 0.389067 | 4.4:-65547121 | MS.gene065949:CDS |
| GAGCGTTGCTGCGTGTGAGC+TGG | 0.407608 | 4.4:-65547593 | MS.gene065949:CDS |
| GTGAGCTGGGAATTAGGATA+TGG | 0.419661 | 4.4:-65547579 | MS.gene065949:CDS |
| TTTCCTATTACCATCTCAAT+TGG | 0.421411 | 4.4:+65548466 | None:intergenic |
| CATATTTGTTTGGCAGTGGT+TGG | 0.426113 | 4.4:-65545506 | MS.gene065949:CDS |
| GAAATGACTGGCTTGGGCAT+TGG | 0.428307 | 4.4:-65547642 | MS.gene065949:CDS |
| TGACTGTAGAGGAACGGATT+GGG | 0.429854 | 4.4:-65547377 | MS.gene065949:CDS |
| ACAAAAGCATGTTGAATACT+TGG | 0.433435 | 4.4:+65548897 | None:intergenic |
| AAGAAAGAAATGACTGGCTT+GGG | 0.441743 | 4.4:-65547648 | MS.gene065949:CDS |
| GAAAGTACTGAATATGCAAA+AGG | 0.441865 | 4.4:-65549033 | MS.gene065949:CDS |
| ATGTCAGGCCATAGCTTACA+TGG | 0.460197 | 4.4:-65547159 | MS.gene065949:intron |
| GAAGAAAGAAATGACTGGCT+TGG | 0.461382 | 4.4:-65547649 | MS.gene065949:CDS |
| TCTCAGACCACGCCCTGTAA+TGG | 0.475502 | 4.4:+65548530 | None:intergenic |
| GGCCATGCAACAGTATGAAA+TGG | 0.476558 | 4.4:-65547295 | MS.gene065949:intron |
| AAAGTACTGAATATGCAAAA+GGG | 0.478686 | 4.4:-65549032 | MS.gene065949:CDS |
| CAGTACCACAGAAAAGGAAT+TGG | 0.480228 | 4.4:-65545531 | MS.gene065949:CDS |
| TTGGGCAGACAGATGTTGCC+AGG | 0.480432 | 4.4:-65545696 | MS.gene065949:CDS |
| GGGGTGGCAAGCATGAAAGC+TGG | 0.481889 | 4.4:-65547621 | MS.gene065949:CDS |
| GAAGTATAGGGATATGGCTC+TGG | 0.484336 | 4.4:-65547108 | MS.gene065949:CDS |
| ATTGAGATGGTAATAGGAAA+AGG | 0.485564 | 4.4:-65548463 | MS.gene065949:intron |
| GGCTTTATTTAGGAGAGGTA+AGG | 0.490198 | 4.4:-65545731 | MS.gene065949:CDS |
| GACAGGCCGCCGTGTTAAGA+TGG | 0.492108 | 4.4:+65547069 | None:intergenic |
| CTGAACCAGTACCACAGAAA+AGG | 0.492954 | 4.4:-65545537 | MS.gene065949:CDS |
| GGGTGGCAAGCATGAAAGCT+GGG | 0.494339 | 4.4:-65547620 | MS.gene065949:CDS |
| GGTTCATATTTGTTTGGCAG+TGG | 0.498991 | 4.4:-65545510 | MS.gene065949:CDS |
| TCATAAACTAAATCTGCCAT+TGG | 0.508037 | 4.4:+65547522 | None:intergenic |
| TGAGGATGAGAGCAATTTGA+AGG | 0.509951 | 4.4:-65545752 | MS.gene065949:CDS |
| ATGACTGTAGAGGAACGGAT+TGG | 0.522055 | 4.4:-65547378 | MS.gene065949:CDS |
| AACGGATTGGGGCAGCAGAT+CGG | 0.529421 | 4.4:-65547365 | MS.gene065949:CDS |
| TAAACTAAATCTGCCATTGG+TGG | 0.530780 | 4.4:+65547525 | None:intergenic |
| AGCGTTGCTGCGTGTGAGCT+GGG | 0.534499 | 4.4:-65547592 | MS.gene065949:CDS |
| GGTAAGGCTAGAGCAGCACT+TGG | 0.543948 | 4.4:-65545715 | MS.gene065949:CDS |
| AAGCATGTTGAATACTTGGA+AGG | 0.544025 | 4.4:+65548901 | None:intergenic |
| GTCATCTCCCATGTAAGCTA+TGG | 0.545323 | 4.4:+65547151 | None:intergenic |
| GGCAGCAGATCGGAGAAAGA+TGG | 0.546425 | 4.4:-65547355 | MS.gene065949:CDS |
| AGTTGAAGTTCTTCATGAGA+AGG | 0.548105 | 4.4:-65548962 | MS.gene065949:CDS |
| TGGTAGTCCATTACAGGGCG+TGG | 0.549466 | 4.4:-65548537 | MS.gene065949:intron |
| ACAAAACAAATTATTAAGGA+AGG | 0.552128 | 4.4:-65548937 | MS.gene065949:CDS |
| TAAATTTGAAGATACATGGC+AGG | 0.555459 | 4.4:-65548497 | MS.gene065949:CDS |
| GCGGTTCAGCTTAATCAGAC+AGG | 0.561365 | 4.4:+65547052 | None:intergenic |
| GAATTAGGATATGGAAAGGA+AGG | 0.562161 | 4.4:-65547570 | MS.gene065949:CDS |
| CAGGGCGTGGTCTGAGAACA+CGG | 0.563793 | 4.4:-65548524 | MS.gene065949:CDS |
| AACCGCTATGAAGAAGCTAT+AGG | 0.568196 | 4.4:-65547035 | MS.gene065949:CDS |
| GACTGGCTTGGGCATTGGGG+TGG | 0.573654 | 4.4:-65547637 | MS.gene065949:CDS |
| CAAATTATTAAGGAAGGTCA+TGG | 0.574339 | 4.4:-65548931 | MS.gene065949:CDS |
| AACCATTTCATACTGTTGCA+TGG | 0.576813 | 4.4:+65547293 | None:intergenic |
| ACAGAGAAGAAAGAAATGAC+TGG | 0.578132 | 4.4:-65547654 | MS.gene065949:intron |
| GACTGTAGAGGAACGGATTG+GGG | 0.579307 | 4.4:-65547376 | MS.gene065949:CDS |
| TTGAAGGCTTTATTTAGGAG+AGG | 0.585733 | 4.4:-65545736 | MS.gene065949:CDS |
| AGCATAAATTTGAAGATACA+TGG | 0.586003 | 4.4:-65548501 | MS.gene065949:CDS |
| CTGGGAATTAGGATATGGAA+AGG | 0.597900 | 4.4:-65547574 | MS.gene065949:CDS |
| GCAGATCGGAGAAAGATGGA+TGG | 0.599142 | 4.4:-65547351 | MS.gene065949:CDS |
| GCCGCCGTGTTAAGATGGCA+TGG | 0.599939 | 4.4:+65547074 | None:intergenic |
| GTTTCAGGAAAATAAACTAG+AGG | 0.610535 | 4.4:-65547319 | MS.gene065949:CDS |
| TCAGGAAAATAAACTAGAGG+AGG | 0.614029 | 4.4:-65547316 | MS.gene065949:CDS |
| AAGTACTGAATATGCAAAAG+GGG | 0.616531 | 4.4:-65549031 | MS.gene065949:CDS |
| AGCTATTTATCAAAAGCAGA+AGG | 0.618624 | 4.4:-65545590 | MS.gene065949:CDS |
| GTCCTATAGCTTCTTCATAG+CGG | 0.623004 | 4.4:+65547033 | None:intergenic |
| GTAAGGCTAGAGCAGCACTT+GGG | 0.626696 | 4.4:-65545714 | MS.gene065949:CDS |
| AAACTTGCAGGTATTAAGTG+AGG | 0.627657 | 4.4:-65545770 | MS.gene065949:intron |
| AATGACTGGCTTGGGCATTG+GGG | 0.631535 | 4.4:-65547640 | MS.gene065949:CDS |
| GTGATATGACTGTAGAGGAA+CGG | 0.631871 | 4.4:-65547383 | MS.gene065949:CDS |
| TATGGTGGTAGTCCATTACA+GGG | 0.637407 | 4.4:-65548542 | MS.gene065949:intron |
| TCGCAGTGATATGACTGTAG+AGG | 0.641089 | 4.4:-65547388 | MS.gene065949:CDS |
| TGGGCAGACAGATGTTGCCA+GGG | 0.643676 | 4.4:-65545695 | MS.gene065949:CDS |
| GAATCCATGCCATCTTAACA+CGG | 0.645723 | 4.4:-65547078 | MS.gene065949:CDS |
| GGAGCAACGACCAATTGAGA+TGG | 0.655756 | 4.4:-65548476 | MS.gene065949:CDS |
| GGTGGCAAGCATGAAAGCTG+GGG | 0.672895 | 4.4:-65547619 | MS.gene065949:CDS |
| TGTCAGGCCATAGCTTACAT+GGG | 0.675965 | 4.4:-65547158 | MS.gene065949:intron |
| TCTCAACCACAATCAAAACC+AGG | 0.685386 | 4.4:-65549305 | MS.gene065949:intron |
| TCCATGCCATCTTAACACGG+CGG | 0.771881 | 4.4:-65547075 | MS.gene065949:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATAATAAAATTATAATCA+TGG | - | chr4.4:65548257-65548276 | MS.gene065949:intron | 10.0% |
| !!! | TAAATTGTTATAGTATTTTC+TGG | - | chr4.4:65548908-65548927 | MS.gene065949:CDS | 15.0% |
| !!! | TGTATATTTATTTTAGTTCA+TGG | - | chr4.4:65546547-65546566 | MS.gene065949:intron | 15.0% |
| !! | ACAAAACAAATTATTAAGGA+AGG | - | chr4.4:65545830-65545849 | MS.gene065949:intron | 20.0% |
| !! | ACTAAAATAAATATACACTC+AGG | + | chr4.4:65546544-65546563 | None:intergenic | 20.0% |
| !! | ATAAATGGAAATTAATTACC+TGG | + | chr4.4:65545483-65545502 | None:intergenic | 20.0% |
| !! | CTAAAATAAATATACACTCA+GGG | + | chr4.4:65546543-65546562 | None:intergenic | 20.0% |
| !! | CTTGATAAAAGTTTATAAAG+AGG | - | chr4.4:65546713-65546732 | MS.gene065949:intron | 20.0% |
| !! | GGTTACAAAACAAATTATTA+AGG | - | chr4.4:65545826-65545845 | MS.gene065949:intron | 20.0% |
| !! | TAAAATAAATATACACTCAG+GGG | + | chr4.4:65546542-65546561 | None:intergenic | 20.0% |
| !! | TAACAATTTACAAGTATGTT+TGG | + | chr4.4:65548898-65548917 | None:intergenic | 20.0% |
| !! | TACTATGTAAATAAGCATTT+CGG | - | chr4.4:65547805-65547824 | MS.gene065949:intron | 20.0% |
| !! | TTATAAACTGGTAATAGAAA+TGG | - | chr4.4:65546430-65546449 | MS.gene065949:intron | 20.0% |
| !! | TTCAACAAGAGAAAATAAAA+AGG | + | chr4.4:65546176-65546195 | None:intergenic | 20.0% |
| !!! | AGAGTAAATTTTCATTTTAG+TGG | - | chr4.4:65546468-65546487 | MS.gene065949:intron | 20.0% |
| !!! | ATTCCTTTTTATCTTATTGA+AGG | - | chr4.4:65548365-65548384 | MS.gene065949:intron | 20.0% |
| !!! | ATTGGTCTTTATTAATGTAA+GGG | + | chr4.4:65547888-65547907 | None:intergenic | 20.0% |
| !!! | CAGAGATTTTTATGTAATTT+TGG | - | chr4.4:65546629-65546648 | MS.gene065949:intron | 20.0% |
| !!! | TAAAGAAATATTTTGATCGA+GGG | + | chr4.4:65547920-65547939 | None:intergenic | 20.0% |
| !!! | TTCCTTTTTATCTTATTGAA+GGG | - | chr4.4:65548366-65548385 | MS.gene065949:intron | 20.0% |
| ! | AAAGAAATCCAATTGATCAA+TGG | + | chr4.4:65546365-65546384 | None:intergenic | 25.0% |
| ! | AACAAAAGAAAATTTCCTCA+CGG | + | chr4.4:65546045-65546064 | None:intergenic | 25.0% |
| ! | ACAATTTAGAGAATAGATGT+AGG | + | chr4.4:65546398-65546417 | None:intergenic | 25.0% |
| ! | ACTAAATAAAAGTGAGAATG+AGG | + | chr4.4:65548813-65548832 | None:intergenic | 25.0% |
| ! | ACTATCAAAAGAGATATTTG+AGG | - | chr4.4:65546579-65546598 | MS.gene065949:intron | 25.0% |
| ! | AGAAAAACTTGAATCAAACA+TGG | + | chr4.4:65548651-65548670 | None:intergenic | 25.0% |
| ! | AGATATAGAATCATGTTACA+AGG | + | chr4.4:65548943-65548962 | None:intergenic | 25.0% |
| ! | AGCATAAATTTGAAGATACA+TGG | - | chr4.4:65546266-65546285 | MS.gene065949:intron | 25.0% |
| ! | ATTCATAATTATGACCTGTA+TGG | - | chr4.4:65546200-65546219 | MS.gene065949:intron | 25.0% |
| ! | ATTTCCCTTGACTAAAAATA+TGG | + | chr4.4:65548494-65548513 | None:intergenic | 25.0% |
| ! | CAAATTTGATTATCTACCAT+TGG | - | chr4.4:65548022-65548041 | MS.gene065949:intron | 25.0% |
| ! | GAAAAACTTGAATCAAACAT+GGG | + | chr4.4:65548650-65548669 | None:intergenic | 25.0% |
| ! | GAGATCTATAAAGGAATATT+TGG | - | chr4.4:65549199-65549218 | MS.gene065949:intron | 25.0% |
| ! | GATAAAAGTTTATAAAGAGG+AGG | - | chr4.4:65546716-65546735 | MS.gene065949:intron | 25.0% |
| ! | GATACAAGACTAATATTTAC+AGG | + | chr4.4:65546864-65546883 | None:intergenic | 25.0% |
| ! | TATAGTGAGTAAAATTCACA+GGG | - | chr4.4:65547350-65547369 | MS.gene065949:CDS | 25.0% |
| ! | TGGTAGATAATCAAATTTGA+AGG | + | chr4.4:65548021-65548040 | None:intergenic | 25.0% |
| ! | TTATAGTGAGTAAAATTCAC+AGG | - | chr4.4:65547349-65547368 | MS.gene065949:CDS | 25.0% |
| ! | TTCCCTTCAATAAGATAAAA+AGG | + | chr4.4:65548371-65548390 | None:intergenic | 25.0% |
| !! | AATTGCTGAAGAAAATTTTG+AGG | + | chr4.4:65547832-65547851 | None:intergenic | 25.0% |
| !! | GTTTTCATTAAATTGTTGCA+TGG | - | chr4.4:65547306-65547325 | MS.gene065949:CDS | 25.0% |
| !! | TGATTTTCGTGTTTATAAAC+TGG | - | chr4.4:65546418-65546437 | MS.gene065949:intron | 25.0% |
| !! | TTTTCTTGACCTACAAAATA+AGG | + | chr4.4:65545692-65545711 | None:intergenic | 25.0% |
| !!! | AAAGTACTGAATATGCAAAA+GGG | - | chr4.4:65545735-65545754 | MS.gene065949:CDS | 25.0% |
| !!! | AAATTGTTTTACCGAGTTTT+GGG | - | chr4.4:65548225-65548244 | MS.gene065949:intron | 25.0% |
| !!! | ATGCTTGAAGTTTAAAGTTT+TGG | - | chr4.4:65546328-65546347 | MS.gene065949:intron | 25.0% |
| !!! | ATGTAATTTTGGTACATTCA+AGG | - | chr4.4:65546640-65546659 | MS.gene065949:intron | 25.0% |
| !!! | CTAAAGAAATATTTTGATCG+AGG | + | chr4.4:65547921-65547940 | None:intergenic | 25.0% |
| !!! | GATTGGTCTTTATTAATGTA+AGG | + | chr4.4:65547889-65547908 | None:intergenic | 25.0% |
| !!! | TAAATTGTTTTACCGAGTTT+TGG | - | chr4.4:65548224-65548243 | MS.gene065949:intron | 25.0% |
| !!! | TCTTTAACAGACTTGTTATT+TGG | - | chr4.4:65547070-65547089 | MS.gene065949:CDS | 25.0% |
| !!! | TTGCTATTTCACAAATTTGA+GGG | + | chr4.4:65547859-65547878 | None:intergenic | 25.0% |
| !!! | TTTGCTATTTCACAAATTTG+AGG | + | chr4.4:65547860-65547879 | None:intergenic | 25.0% |
| AAATGAGTGAATTATATCCC+TGG | + | chr4.4:65548702-65548721 | None:intergenic | 30.0% | |
| AAATGTCTCACTCTTTATCA+TGG | + | chr4.4:65548742-65548761 | None:intergenic | 30.0% | |
| AATGAGTGAATTATATCCCT+GGG | + | chr4.4:65548701-65548720 | None:intergenic | 30.0% | |
| AATGTCTCACTCTTTATCAT+GGG | + | chr4.4:65548741-65548760 | None:intergenic | 30.0% | |
| AGCTATTTATCAAAAGCAGA+AGG | - | chr4.4:65549177-65549196 | MS.gene065949:intron | 30.0% | |
| ATTAAATTGTTGCATGGTCA+CGG | - | chr4.4:65547312-65547331 | MS.gene065949:CDS | 30.0% | |
| ATTATGACCTGTATGGTTTA+TGG | - | chr4.4:65546207-65546226 | MS.gene065949:intron | 30.0% | |
| ATTGAGATGGTAATAGGAAA+AGG | - | chr4.4:65546304-65546323 | MS.gene065949:intron | 30.0% | |
| CAAATTATTAAGGAAGGTCA+TGG | - | chr4.4:65545836-65545855 | MS.gene065949:intron | 30.0% | |
| CTGTCATTGTGTTGAAATTT+GGG | + | chr4.4:65546784-65546803 | None:intergenic | 30.0% | |
| GAGTATAGAAGTCAATATGT+AGG | + | chr4.4:65547971-65547990 | None:intergenic | 30.0% | |
| GGTAAGTGAAAAGTTATAGT+TGG | + | chr4.4:65548792-65548811 | None:intergenic | 30.0% | |
| GTATCACATGAGTGAATAAA+TGG | + | chr4.4:65545498-65545517 | None:intergenic | 30.0% | |
| GTTTCAGGAAAATAAACTAG+AGG | - | chr4.4:65547448-65547467 | MS.gene065949:intron | 30.0% | |
| TAAAATTTCTGCGATTTCCT+GGG | - | chr4.4:65548674-65548693 | MS.gene065949:intron | 30.0% | |
| TAAATTTGAAGATACATGGC+AGG | - | chr4.4:65546270-65546289 | MS.gene065949:intron | 30.0% | |
| TCAATATGTAGGTCTTTCAT+CGG | + | chr4.4:65547960-65547979 | None:intergenic | 30.0% | |
| TCATAAACTAAATCTGCCAT+TGG | + | chr4.4:65547248-65547267 | None:intergenic | 30.0% | |
| TCGAATTTCATGTATGATTG+AGG | - | chr4.4:65545663-65545682 | MS.gene065949:CDS | 30.0% | |
| TGTCATTGTGTTGAAATTTG+GGG | + | chr4.4:65546783-65546802 | None:intergenic | 30.0% | |
| TTAAAATTTCTGCGATTTCC+TGG | - | chr4.4:65548673-65548692 | MS.gene065949:intron | 30.0% | |
| TTATCATGGGAATGAAAAAG+CGG | + | chr4.4:65548728-65548747 | None:intergenic | 30.0% | |
| TTTCAACAAATGACTTCTGT+TGG | + | chr4.4:65548980-65548999 | None:intergenic | 30.0% | |
| TTTCCTATTACCATCTCAAT+TGG | + | chr4.4:65546304-65546323 | None:intergenic | 30.0% | |
| ! | ACAAAAGCATGTTGAATACT+TGG | + | chr4.4:65545873-65545892 | None:intergenic | 30.0% |
| ! | ATTCAACATGCTTTTGTAAG+TGG | - | chr4.4:65545876-65545895 | MS.gene065949:intron | 30.0% |
| ! | ATTTTTACCAAAGTGAGCTT+TGG | - | chr4.4:65548613-65548632 | MS.gene065949:intron | 30.0% |
| ! | GGAATTGGTTCATATTTGTT+TGG | - | chr4.4:65549251-65549270 | MS.gene065949:intron | 30.0% |
| ! | TCAACTTCAGAATCAACTTT+TGG | + | chr4.4:65545791-65545810 | None:intergenic | 30.0% |
| ! | TTTGAATGACCCAAATGTTT+TGG | - | chr4.4:65546015-65546034 | MS.gene065949:intron | 30.0% |
| !! | AAGTACTGAATATGCAAAAG+GGG | - | chr4.4:65545736-65545755 | MS.gene065949:CDS | 30.0% |
| !! | CTTTTGTTTAGACTGAATGT+GGG | - | chr4.4:65546057-65546076 | MS.gene065949:intron | 30.0% |
| !! | GAAAGTACTGAATATGCAAA+AGG | - | chr4.4:65545734-65545753 | MS.gene065949:CDS | 30.0% |
| !! | GCAATTTGAAGGCTTTATTT+AGG | - | chr4.4:65549026-65549045 | MS.gene065949:CDS | 30.0% |
| !! | GTTTGCTAAGTTGATTATCT+TGG | - | chr4.4:65547582-65547601 | MS.gene065949:CDS | 30.0% |
| !! | TCTTTTGTTTAGACTGAATG+TGG | - | chr4.4:65546056-65546075 | MS.gene065949:intron | 30.0% |
| !!! | CATCTTTGTGCTTTTTTTCA+CGG | + | chr4.4:65549321-65549340 | None:intergenic | 30.0% |
| !!! | CTTGCCATATTTTTAGTCAA+GGG | - | chr4.4:65548487-65548506 | MS.gene065949:CDS | 30.0% |
| !!! | GACTTGTTATTTGGTTTTGA+TGG | - | chr4.4:65547079-65547098 | MS.gene065949:CDS | 30.0% |
| !!! | TAATTACCTGGTTTTGATTG+TGG | + | chr4.4:65545471-65545490 | None:intergenic | 30.0% |
| !!! | TCTTGCCATATTTTTAGTCA+AGG | - | chr4.4:65548486-65548505 | MS.gene065949:CDS | 30.0% |
| !!! | TTGAGGAAACCTTATTTTGT+AGG | - | chr4.4:65545680-65545699 | MS.gene065949:CDS | 30.0% |
| AAACTTGCAGGTATTAAGTG+AGG | - | chr4.4:65548997-65549016 | MS.gene065949:CDS | 35.0% | |
| AAAGAGTGAGACATTTCCAT+GGG | - | chr4.4:65548746-65548765 | MS.gene065949:intron | 35.0% | |
| AACCATTTCATACTGTTGCA+TGG | + | chr4.4:65547477-65547496 | None:intergenic | 35.0% | |
| AAGCAGAAGGAGATCTATAA+AGG | - | chr4.4:65549190-65549209 | MS.gene065949:intron | 35.0% | |
| AAGCATGTTGAATACTTGGA+AGG | + | chr4.4:65545869-65545888 | None:intergenic | 35.0% | |
| ACAGAGAAGAAAGAAATGAC+TGG | - | chr4.4:65547113-65547132 | MS.gene065949:CDS | 35.0% | |
| ACGTGAAGCAAAACTGTATT+AGG | - | chr4.4:65546088-65546107 | MS.gene065949:intron | 35.0% | |
| ACTTCATGTTCCAGTTGTTT+GGG | - | chr4.4:65547637-65547656 | MS.gene065949:CDS | 35.0% | |
| AGTTGAAGTTCTTCATGAGA+AGG | - | chr4.4:65545805-65545824 | MS.gene065949:intron | 35.0% | |
| ATTCAAGGACTACAGTGTAT+TGG | - | chr4.4:65546655-65546674 | MS.gene065949:intron | 35.0% | |
| CACGGTAAACCAAAACATTT+GGG | + | chr4.4:65546027-65546046 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr4.4:65546760-65546779 | None:intergenic | 35.0% | |
| CTTGCAATTGCTTTATCTTC+AGG | + | chr4.4:65549127-65549146 | None:intergenic | 35.0% | |
| GAATTAGGATATGGAAAGGA+AGG | - | chr4.4:65547197-65547216 | MS.gene065949:intron | 35.0% | |
| GCTGTCATTGTGTTGAAATT+TGG | + | chr4.4:65546785-65546804 | None:intergenic | 35.0% | |
| GGACTACTCAATAATTCTTC+AGG | + | chr4.4:65545767-65545786 | None:intergenic | 35.0% | |
| GTTTATGAAGTTGAGCTCAT+TGG | - | chr4.4:65547260-65547279 | MS.gene065949:intron | 35.0% | |
| TAAACTAAATCTGCCATTGG+TGG | + | chr4.4:65547245-65547264 | None:intergenic | 35.0% | |
| TAAAGAGTGAGACATTTCCA+TGG | - | chr4.4:65548745-65548764 | MS.gene065949:intron | 35.0% | |
| TAGTGGCTTAATGTGTAAGA+CGG | - | chr4.4:65546485-65546504 | MS.gene065949:intron | 35.0% | |
| TATCTACCATTGGAGTTCAA+TGG | - | chr4.4:65548032-65548051 | MS.gene065949:intron | 35.0% | |
| TATGGCAAGATATGCTTAGT+AGG | + | chr4.4:65548476-65548495 | None:intergenic | 35.0% | |
| TCACGGTAAACCAAAACATT+TGG | + | chr4.4:65546028-65546047 | None:intergenic | 35.0% | |
| TCAGGAAAATAAACTAGAGG+AGG | - | chr4.4:65547451-65547470 | MS.gene065949:intron | 35.0% | |
| TCTTGTGTCCATTGATCAAT+TGG | - | chr4.4:65546354-65546373 | MS.gene065949:intron | 35.0% | |
| TGAAAAGTTATAGTTGGCTG+AGG | + | chr4.4:65548786-65548805 | None:intergenic | 35.0% | |
| TGATTATCTTGGTTCATGTC+AGG | - | chr4.4:65547593-65547612 | MS.gene065949:CDS | 35.0% | |
| TTACAATCCAAAGCTCACTT+TGG | + | chr4.4:65548623-65548642 | None:intergenic | 35.0% | |
| TTCAAGGACTACAGTGTATT+GGG | - | chr4.4:65546656-65546675 | MS.gene065949:intron | 35.0% | |
| TTTAGTCCATTGAACTCCAA+TGG | + | chr4.4:65548041-65548060 | None:intergenic | 35.0% | |
| TTTATGTCCTTGGAGTTCTA+AGG | + | chr4.4:65548102-65548121 | None:intergenic | 35.0% | |
| ! | ACTTCAGAATCAACTTTTGG+AGG | + | chr4.4:65545788-65545807 | None:intergenic | 35.0% |
| ! | AGTCATTTGTTGAAACTTGC+AGG | - | chr4.4:65548985-65549004 | MS.gene065949:CDS | 35.0% |
| ! | ATGAACCAATTCCTTTTCTG+TGG | + | chr4.4:65549244-65549263 | None:intergenic | 35.0% |
| ! | TCAAAGTCATGCTGTTTGAT+TGG | - | chr4.4:65548155-65548174 | MS.gene065949:intron | 35.0% |
| ! | TTATGTCCTTGGAGTTCTAA+GGG | + | chr4.4:65548101-65548120 | None:intergenic | 35.0% |
| ! | TTTTCCAAATGTTCCACCAA+TGG | - | chr4.4:65547229-65547248 | MS.gene065949:intron | 35.0% |
| ! | TTTTTCACGGTTGAAAAGTG+TGG | + | chr4.4:65549308-65549327 | None:intergenic | 35.0% |
| !! | AAGAAAGAAATGACTGGCTT+GGG | - | chr4.4:65547119-65547138 | MS.gene065949:CDS | 35.0% |
| !! | AGCTTTTAGAAAATCTTCCC+TGG | + | chr4.4:65549092-65549111 | None:intergenic | 35.0% |
| !! | TTGAAGGCTTTATTTAGGAG+AGG | - | chr4.4:65549031-65549050 | MS.gene065949:CDS | 35.0% |
| !!! | AAATGTTTTGGTTTACCGTG+AGG | - | chr4.4:65546027-65546046 | MS.gene065949:intron | 35.0% |
| AAAGTTATAGTTGGCTGAGG+AGG | + | chr4.4:65548783-65548802 | None:intergenic | 40.0% | |
| AACCGCTATGAAGAAGCTAT+AGG | - | chr4.4:65547732-65547751 | MS.gene065949:intron | 40.0% | |
| ACTACCACCATAAACCATAC+AGG | + | chr4.4:65546217-65546236 | None:intergenic | 40.0% | |
| AGAGCTCATAAGAAGAGTAG+AGG | + | chr4.4:65546142-65546161 | None:intergenic | 40.0% | |
| AGTAGACTCAACCCAAAACT+CGG | + | chr4.4:65548239-65548258 | None:intergenic | 40.0% | |
| ATGACCTGTATGGTTTATGG+TGG | - | chr4.4:65546210-65546229 | MS.gene065949:intron | 40.0% | |
| ATTTGAGGACCAAACTCACT+AGG | - | chr4.4:65546594-65546613 | MS.gene065949:intron | 40.0% | |
| CAGTACCACAGAAAAGGAAT+TGG | - | chr4.4:65549236-65549255 | MS.gene065949:intron | 40.0% | |
| CATATTTGTTTGGCAGTGGT+TGG | - | chr4.4:65549261-65549280 | MS.gene065949:intron | 40.0% | |
| CGACCAATTGAGATGGTAAT+AGG | - | chr4.4:65546298-65546317 | MS.gene065949:intron | 40.0% | |
| CTGGGAATTAGGATATGGAA+AGG | - | chr4.4:65547193-65547212 | MS.gene065949:intron | 40.0% | |
| CTGTCTAAGAATGCTTTCAC+TGG | + | chr4.4:65548437-65548456 | None:intergenic | 40.0% | |
| GAATCCATGCCATCTTAACA+CGG | - | chr4.4:65547689-65547708 | MS.gene065949:intron | 40.0% | |
| GACGCATTGAAGGACAAAAA+TGG | - | chr4.4:65546809-65546828 | MS.gene065949:intron | 40.0% | |
| GACTTCATGTTCCAGTTGTT+TGG | - | chr4.4:65547636-65547655 | MS.gene065949:CDS | 40.0% | |
| GGATGGAAATGTTCTGTTTC+AGG | - | chr4.4:65547433-65547452 | MS.gene065949:intron | 40.0% | |
| GGTTCATATTTGTTTGGCAG+TGG | - | chr4.4:65549257-65549276 | MS.gene065949:intron | 40.0% | |
| GTCCTATAGCTTCTTCATAG+CGG | + | chr4.4:65547737-65547756 | None:intergenic | 40.0% | |
| GTGATATGACTGTAGAGGAA+CGG | - | chr4.4:65547384-65547403 | MS.gene065949:CDS | 40.0% | |
| TATGGTGGTAGTCCATTACA+GGG | - | chr4.4:65546225-65546244 | MS.gene065949:intron | 40.0% | |
| TCACTCAGCATTTATGTCCT+TGG | + | chr4.4:65548112-65548131 | None:intergenic | 40.0% | |
| TCTCAACCACAATCAAAACC+AGG | - | chr4.4:65545462-65545481 | MS.gene065949:CDS | 40.0% | |
| TGAGGATGAGAGCAATTTGA+AGG | - | chr4.4:65549015-65549034 | MS.gene065949:CDS | 40.0% | |
| TTATGACATCTAGCGTAGTG+TGG | - | chr4.4:65547010-65547029 | MS.gene065949:intron | 40.0% | |
| TTATGGTGGTAGTCCATTAC+AGG | - | chr4.4:65546224-65546243 | MS.gene065949:intron | 40.0% | |
| TTTGTCCTTCAATGCGTCAA+GGG | + | chr4.4:65546807-65546826 | None:intergenic | 40.0% | |
| ! | AATGAGTTCTGGCAAATGAC+AGG | - | chr4.4:65546918-65546937 | MS.gene065949:intron | 40.0% |
| ! | ATGAGTTCTGGCAAATGACA+GGG | - | chr4.4:65546919-65546938 | MS.gene065949:intron | 40.0% |
| ! | ATTGAGTTCTGGCAAATGAC+AGG | - | chr4.4:65546890-65546909 | MS.gene065949:intron | 40.0% |
| ! | CAATTCCTTTTCTGTGGTAC+TGG | + | chr4.4:65549238-65549257 | None:intergenic | 40.0% |
| ! | CCAGTTGTTTGGGAAGTATA+GGG | - | chr4.4:65547647-65547666 | MS.gene065949:CDS | 40.0% |
| ! | GAAGAAAGAAATGACTGGCT+TGG | - | chr4.4:65547118-65547137 | MS.gene065949:CDS | 40.0% |
| ! | GCATCTTTGATCAGAAGTGT+TGG | - | chr4.4:65545619-65545638 | MS.gene065949:CDS | 40.0% |
| ! | GTTTGGGAAGTATAGGGATA+TGG | - | chr4.4:65547653-65547672 | MS.gene065949:CDS | 40.0% |
| ! | TCCAGTTGTTTGGGAAGTAT+AGG | - | chr4.4:65547646-65547665 | MS.gene065949:CDS | 40.0% |
| ! | TGTCATTTGCCAGAACTCAA+TGG | + | chr4.4:65546891-65546910 | None:intergenic | 40.0% |
| ! | TGTCATTTGCCAGAACTCAT+TGG | + | chr4.4:65546919-65546938 | None:intergenic | 40.0% |
| ! | TTGAGTTCTGGCAAATGACA+GGG | - | chr4.4:65546891-65546910 | MS.gene065949:intron | 40.0% |
| ! | TTTTGTCCTTCAATGCGTCA+AGG | + | chr4.4:65546808-65546827 | None:intergenic | 40.0% |
| !! | GGCTTTATTTAGGAGAGGTA+AGG | - | chr4.4:65549036-65549055 | MS.gene065949:CDS | 40.0% |
| !!! | AGGTCTTTCATCGGTTTTGA+TGG | + | chr4.4:65547951-65547970 | None:intergenic | 40.0% |
| AGAGTCTCATCTATCCGATG+TGG | + | chr4.4:65546695-65546714 | None:intergenic | 45.0% | |
| AGCATGAGCGCACAATATTG+AGG | - | chr4.4:65548287-65548306 | MS.gene065949:intron | 45.0% | |
| ATCAAAGATGCGTCTGGTGT+CGG | + | chr4.4:65545610-65545629 | None:intergenic | 45.0% | |
| ATCTATCCGATGTGGGACTT+GGG | + | chr4.4:65546687-65546706 | None:intergenic | 45.0% | |
| ATGACTGTAGAGGAACGGAT+TGG | - | chr4.4:65547389-65547408 | MS.gene065949:CDS | 45.0% | |
| ATGTCAGGCCATAGCTTACA+TGG | - | chr4.4:65547608-65547627 | MS.gene065949:CDS | 45.0% | |
| CCCTATACTTCCCAAACAAC+TGG | + | chr4.4:65547650-65547669 | None:intergenic | 45.0% | |
| CTGAACCAGTACCACAGAAA+AGG | - | chr4.4:65549230-65549249 | MS.gene065949:intron | 45.0% | |
| CTTCTGATCAAAGATGCGTC+TGG | + | chr4.4:65545616-65545635 | None:intergenic | 45.0% | |
| GAAAAACCCAAGTCCCACAT+CGG | - | chr4.4:65546678-65546697 | MS.gene065949:intron | 45.0% | |
| GAAGTATAGGGATATGGCTC+TGG | - | chr4.4:65547659-65547678 | MS.gene065949:intron | 45.0% | |
| GAGTCTCATCTATCCGATGT+GGG | + | chr4.4:65546694-65546713 | None:intergenic | 45.0% | |
| GATCGAGGGACGAAATTGAT+TGG | + | chr4.4:65547906-65547925 | None:intergenic | 45.0% | |
| GCATCTTGTCCTAGTGAGTT+TGG | + | chr4.4:65546606-65546625 | None:intergenic | 45.0% | |
| GCATTCTTAGACAGAAGCTG+TGG | - | chr4.4:65548443-65548462 | MS.gene065949:intron | 45.0% | |
| GGAGGTAATTTCTACTCCCA+TGG | + | chr4.4:65548765-65548784 | None:intergenic | 45.0% | |
| GGCCATGCAACAGTATGAAA+TGG | - | chr4.4:65547472-65547491 | MS.gene065949:intron | 45.0% | |
| GTATCCATGCCATTGAGTTC+TGG | - | chr4.4:65546879-65546898 | MS.gene065949:intron | 45.0% | |
| GTCATCTCCCATGTAAGCTA+TGG | + | chr4.4:65547619-65547638 | None:intergenic | 45.0% | |
| GTGAGCTGGGAATTAGGATA+TGG | - | chr4.4:65547188-65547207 | MS.gene065949:intron | 45.0% | |
| TCGCAGTGATATGACTGTAG+AGG | - | chr4.4:65547379-65547398 | MS.gene065949:CDS | 45.0% | |
| TCTGCCATTGGTGGAACATT+TGG | + | chr4.4:65547236-65547255 | None:intergenic | 45.0% | |
| TGTCAGGCCATAGCTTACAT+GGG | - | chr4.4:65547609-65547628 | MS.gene065949:CDS | 45.0% | |
| TGTTGCGTCAGTGTTGTATC+TGG | + | chr4.4:65545526-65545545 | None:intergenic | 45.0% | |
| TTTGCCAGAACTCAATGGCA+TGG | + | chr4.4:65546886-65546905 | None:intergenic | 45.0% | |
| ! | TGACTGTAGAGGAACGGATT+GGG | - | chr4.4:65547390-65547409 | MS.gene065949:CDS | 45.0% |
| ! | TGCTCACACGTTTTGTCGTA+AGG | - | chr4.4:65548342-65548361 | MS.gene065949:intron | 45.0% |
| !! | AAATGACTGGCTTGGGCATT+GGG | - | chr4.4:65547126-65547145 | MS.gene065949:CDS | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4.4:65546751-65546770 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4.4:65546748-65546767 | MS.gene065949:intron | 45.0% |
| !! | GAAGTGTTGGTGTTACAGAG+AGG | - | chr4.4:65545632-65545651 | MS.gene065949:CDS | 45.0% |
| !!! | CTTTTCTGTGGTACTGGTTC+AGG | + | chr4.4:65549232-65549251 | None:intergenic | 45.0% |
| CATCTATCCGATGTGGGACT+TGG | + | chr4.4:65546688-65546707 | None:intergenic | 50.0% | |
| GAATTATATCCCTGGGACCC+AGG | + | chr4.4:65548694-65548713 | None:intergenic | 50.0% | |
| GCAGATCGGAGAAAGATGGA+TGG | - | chr4.4:65547416-65547435 | MS.gene065949:intron | 50.0% | |
| GCGGTTCAGCTTAATCAGAC+AGG | + | chr4.4:65547718-65547737 | None:intergenic | 50.0% | |
| GGAGCAACGACCAATTGAGA+TGG | - | chr4.4:65546291-65546310 | MS.gene065949:intron | 50.0% | |
| GTAAGGCTAGAGCAGCACTT+GGG | - | chr4.4:65549053-65549072 | MS.gene065949:CDS | 50.0% | |
| TACCGACCCTTAGAACTCCA+AGG | - | chr4.4:65548092-65548111 | MS.gene065949:intron | 50.0% | |
| TCCATGCCATCTTAACACGG+CGG | - | chr4.4:65547692-65547711 | MS.gene065949:intron | 50.0% | |
| !! | AATGACTGGCTTGGGCATTG+GGG | - | chr4.4:65547127-65547146 | MS.gene065949:CDS | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4.4:65546746-65546765 | None:intergenic | 50.0% |
| !! | GAAATGACTGGCTTGGGCAT+TGG | - | chr4.4:65547125-65547144 | MS.gene065949:CDS | 50.0% |
| !! | GACTGTAGAGGAACGGATTG+GGG | - | chr4.4:65547391-65547410 | MS.gene065949:CDS | 50.0% |
| !! | GTCCTTGGAGTTCTAAGGGT+CGG | + | chr4.4:65548097-65548116 | None:intergenic | 50.0% |
| !! | TGTGGTACTGGTTCAGGTCT+TGG | + | chr4.4:65549226-65549245 | None:intergenic | 50.0% |
| CTGCGTGTGAGCTGGGAATT+AGG | - | chr4.4:65547182-65547201 | MS.gene065949:intron | 55.0% | |
| GACAGCCCTTGACGCATTGA+AGG | - | chr4.4:65546799-65546818 | MS.gene065949:intron | 55.0% | |
| GCACTCCTCACCTTACAAGC+CGG | - | chr4.4:65546738-65546757 | MS.gene065949:intron | 55.0% | |
| GGCAGCAGATCGGAGAAAGA+TGG | - | chr4.4:65547412-65547431 | MS.gene065949:intron | 55.0% | |
| GGGTGGCAAGCATGAAAGCT+GGG | - | chr4.4:65547147-65547166 | MS.gene065949:CDS | 55.0% | |
| GGTAAGGCTAGAGCAGCACT+TGG | - | chr4.4:65549052-65549071 | MS.gene065949:CDS | 55.0% | |
| GGTGGCAAGCATGAAAGCTG+GGG | - | chr4.4:65547148-65547167 | MS.gene065949:CDS | 55.0% | |
| TCTCAGACCACGCCCTGTAA+TGG | + | chr4.4:65546240-65546259 | None:intergenic | 55.0% | |
| TGGGCAGACAGATGTTGCCA+GGG | - | chr4.4:65549072-65549091 | MS.gene065949:intron | 55.0% | |
| TGGTAGTCCATTACAGGGCG+TGG | - | chr4.4:65546230-65546249 | MS.gene065949:intron | 55.0% | |
| TTGGGCAGACAGATGTTGCC+AGG | - | chr4.4:65549071-65549090 | MS.gene065949:intron | 55.0% | |
| ! | GACAGGGTGCCAATGAGTTC+TGG | - | chr4.4:65546907-65546926 | MS.gene065949:intron | 55.0% |
| !! | AACGGATTGGGGCAGCAGAT+CGG | - | chr4.4:65547402-65547421 | MS.gene065949:intron | 55.0% |
| AGCGTTGCTGCGTGTGAGCT+GGG | - | chr4.4:65547175-65547194 | MS.gene065949:intron | 60.0% | |
| CAGGGCGTGGTCTGAGAACA+CGG | - | chr4.4:65546243-65546262 | MS.gene065949:intron | 60.0% | |
| CTGCGATTTCCTGGGTCCCA+GGG | - | chr4.4:65548682-65548701 | MS.gene065949:intron | 60.0% | |
| GACAGGCCGCCGTGTTAAGA+TGG | + | chr4.4:65547701-65547720 | None:intergenic | 60.0% | |
| GCCGCCGTGTTAAGATGGCA+TGG | + | chr4.4:65547696-65547715 | None:intergenic | 60.0% | |
| GGGGTGGCAAGCATGAAAGC+TGG | - | chr4.4:65547146-65547165 | MS.gene065949:CDS | 60.0% | |
| TCTGCGATTTCCTGGGTCCC+AGG | - | chr4.4:65548681-65548700 | MS.gene065949:intron | 60.0% | |
| ! | GAGCGTTGCTGCGTGTGAGC+TGG | - | chr4.4:65547174-65547193 | MS.gene065949:intron | 65.0% |
| !! | GACTGGCTTGGGCATTGGGG+TGG | - | chr4.4:65547130-65547149 | MS.gene065949:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 65545444 | 65549345 | 65545444 | ID=MS.gene065949 |
| chr4.4 | mRNA | 65545444 | 65549345 | 65545444 | ID=MS.gene065949.t1;Parent=MS.gene065949 |
| chr4.4 | exon | 65549306 | 65549345 | 65549306 | ID=MS.gene065949.t1.exon1;Parent=MS.gene065949.t1 |
| chr4.4 | CDS | 65549306 | 65549345 | 65549306 | ID=cds.MS.gene065949.t1;Parent=MS.gene065949.t1 |
| chr4.4 | exon | 65548899 | 65549087 | 65548899 | ID=MS.gene065949.t1.exon2;Parent=MS.gene065949.t1 |
| chr4.4 | CDS | 65548899 | 65549087 | 65548899 | ID=cds.MS.gene065949.t1;Parent=MS.gene065949.t1 |
| chr4.4 | exon | 65548464 | 65548553 | 65548464 | ID=MS.gene065949.t1.exon3;Parent=MS.gene065949.t1 |
| chr4.4 | CDS | 65548464 | 65548553 | 65548464 | ID=cds.MS.gene065949.t1;Parent=MS.gene065949.t1 |
| chr4.4 | exon | 65547488 | 65547672 | 65547488 | ID=MS.gene065949.t1.exon4;Parent=MS.gene065949.t1 |
| chr4.4 | CDS | 65547488 | 65547672 | 65547488 | ID=cds.MS.gene065949.t1;Parent=MS.gene065949.t1 |
| chr4.4 | exon | 65547296 | 65547418 | 65547296 | ID=MS.gene065949.t1.exon5;Parent=MS.gene065949.t1 |
| chr4.4 | CDS | 65547296 | 65547418 | 65547296 | ID=cds.MS.gene065949.t1;Parent=MS.gene065949.t1 |
| chr4.4 | exon | 65547022 | 65547174 | 65547022 | ID=MS.gene065949.t1.exon6;Parent=MS.gene065949.t1 |
| chr4.4 | CDS | 65547022 | 65547174 | 65547022 | ID=cds.MS.gene065949.t1;Parent=MS.gene065949.t1 |
| chr4.4 | exon | 65545444 | 65545782 | 65545444 | ID=MS.gene065949.t1.exon7;Parent=MS.gene065949.t1 |
| chr4.4 | CDS | 65545444 | 65545782 | 65545444 | ID=cds.MS.gene065949.t1;Parent=MS.gene065949.t1 |
| Gene Sequence |
| Protein sequence |
