Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067613.t1 | XP_003605420.2 | 94.8 | 343 | 16 | 1 | 1 | 341 | 1 | 343 | 1.90E-180 | 641.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067613.t1 | Q9SJZ2 | 73.4 | 316 | 84 | 0 | 12 | 327 | 7 | 322 | 4.6e-135 | 482.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067613.t1 | G7JKV1 | 94.8 | 343 | 16 | 1 | 1 | 341 | 1 | 343 | 1.4e-180 | 641.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene067613 | MS.gene072888 | PPI |
MS.gene067613 | MS.gene44482 | PPI |
MS.gene067613 | MS.gene27001 | PPI |
MS.gene35931 | MS.gene067613 | PPI |
MS.gene20276 | MS.gene067613 | PPI |
MS.gene24236 | MS.gene067613 | PPI |
MS.gene67066 | MS.gene067613 | PPI |
MS.gene27263 | MS.gene067613 | PPI |
MS.gene57204 | MS.gene067613 | PPI |
MS.gene35795 | MS.gene067613 | PPI |
MS.gene80170 | MS.gene067613 | PPI |
MS.gene029047 | MS.gene067613 | PPI |
MS.gene014924 | MS.gene067613 | PPI |
MS.gene90718 | MS.gene067613 | PPI |
MS.gene32715 | MS.gene067613 | PPI |
MS.gene014836 | MS.gene067613 | PPI |
MS.gene067613 | MS.gene35853 | PPI |
MS.gene067613 | MS.gene015231 | PPI |
MS.gene09575 | MS.gene067613 | PPI |
MS.gene32635 | MS.gene067613 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067613.t1 | MTR_4g031140 | 94.752 | 343 | 16 | 1 | 1 | 341 | 1 | 343 | 0.0 | 646 |
MS.gene067613.t1 | MTR_4g030890 | 86.275 | 306 | 42 | 0 | 21 | 326 | 93 | 398 | 0.0 | 566 |
MS.gene067613.t1 | MTR_8g076820 | 48.505 | 301 | 151 | 3 | 28 | 324 | 30 | 330 | 3.15e-98 | 294 |
MS.gene067613.t1 | MTR_3g094650 | 46.688 | 317 | 156 | 5 | 10 | 321 | 11 | 319 | 8.87e-98 | 292 |
MS.gene067613.t1 | MTR_3g072190 | 45.652 | 322 | 160 | 5 | 11 | 324 | 4 | 318 | 6.95e-96 | 287 |
MS.gene067613.t1 | MTR_3g466200 | 45.963 | 322 | 161 | 5 | 9 | 324 | 6 | 320 | 9.24e-95 | 285 |
MS.gene067613.t1 | MTR_5g021060 | 46.844 | 301 | 156 | 3 | 28 | 324 | 30 | 330 | 8.34e-94 | 283 |
MS.gene067613.t1 | MTR_2g029800 | 46.078 | 306 | 160 | 3 | 26 | 326 | 27 | 332 | 3.65e-93 | 281 |
MS.gene067613.t1 | MTR_5g074970 | 45.509 | 334 | 162 | 6 | 1 | 324 | 3 | 326 | 1.06e-92 | 280 |
MS.gene067613.t1 | MTR_2g040000 | 46.602 | 309 | 155 | 4 | 25 | 325 | 26 | 332 | 1.94e-91 | 276 |
MS.gene067613.t1 | MTR_5g074860 | 46.605 | 324 | 153 | 7 | 12 | 323 | 9 | 324 | 3.96e-91 | 275 |
MS.gene067613.t1 | MTR_2g029740 | 44.805 | 308 | 165 | 3 | 24 | 326 | 25 | 332 | 7.58e-91 | 276 |
MS.gene067613.t1 | MTR_5g083860 | 45.625 | 320 | 162 | 4 | 10 | 324 | 13 | 325 | 1.04e-90 | 274 |
MS.gene067613.t1 | MTR_1g101830 | 44.795 | 317 | 172 | 3 | 9 | 324 | 8 | 322 | 4.57e-90 | 273 |
MS.gene067613.t1 | MTR_7g093370 | 42.857 | 322 | 176 | 5 | 10 | 325 | 53 | 372 | 1.34e-89 | 273 |
MS.gene067613.t1 | MTR_2g029750 | 44.481 | 308 | 166 | 3 | 24 | 326 | 25 | 332 | 1.51e-89 | 272 |
MS.gene067613.t1 | MTR_2g028980 | 44.194 | 310 | 168 | 3 | 22 | 326 | 23 | 332 | 1.88e-89 | 272 |
MS.gene067613.t1 | MTR_4g122640 | 44.590 | 305 | 163 | 4 | 24 | 324 | 34 | 336 | 4.96e-89 | 270 |
MS.gene067613.t1 | MTR_5g074760 | 44.444 | 324 | 163 | 6 | 11 | 324 | 5 | 321 | 2.64e-88 | 268 |
MS.gene067613.t1 | MTR_3g466180 | 45.455 | 319 | 164 | 3 | 9 | 324 | 12 | 323 | 3.62e-88 | 268 |
MS.gene067613.t1 | MTR_5g074740 | 45.625 | 320 | 160 | 5 | 12 | 324 | 9 | 321 | 5.47e-88 | 267 |
MS.gene067613.t1 | MTR_1g022970 | 46.885 | 305 | 157 | 3 | 25 | 324 | 43 | 347 | 7.67e-88 | 268 |
MS.gene067613.t1 | MTR_3g094670 | 44.479 | 326 | 168 | 5 | 4 | 324 | 5 | 322 | 5.46e-87 | 265 |
MS.gene067613.t1 | MTR_4g029170 | 44.548 | 321 | 166 | 5 | 9 | 324 | 8 | 321 | 9.51e-87 | 264 |
MS.gene067613.t1 | MTR_2g029815 | 42.547 | 322 | 176 | 4 | 14 | 326 | 11 | 332 | 1.18e-86 | 265 |
MS.gene067613.t1 | MTR_4g125940 | 41.925 | 322 | 178 | 4 | 11 | 325 | 11 | 330 | 2.12e-86 | 263 |
MS.gene067613.t1 | MTR_3g094630 | 44.860 | 321 | 163 | 5 | 11 | 324 | 9 | 322 | 3.81e-86 | 263 |
MS.gene067613.t1 | MTR_7g026990 | 43.082 | 318 | 172 | 2 | 10 | 325 | 13 | 323 | 6.61e-86 | 262 |
MS.gene067613.t1 | MTR_2g084010 | 43.653 | 323 | 171 | 4 | 6 | 324 | 3 | 318 | 1.48e-85 | 261 |
MS.gene067613.t1 | MTR_2g084080 | 43.614 | 321 | 167 | 4 | 11 | 324 | 4 | 317 | 2.10e-85 | 261 |
MS.gene067613.t1 | MTR_4g083710 | 42.415 | 323 | 170 | 6 | 12 | 324 | 8 | 324 | 2.20e-85 | 261 |
MS.gene067613.t1 | MTR_5g074710 | 44.410 | 322 | 165 | 5 | 10 | 324 | 7 | 321 | 4.18e-85 | 260 |
MS.gene067613.t1 | MTR_5g049280 | 42.683 | 328 | 175 | 6 | 10 | 325 | 12 | 338 | 1.35e-84 | 259 |
MS.gene067613.t1 | MTR_1g054205 | 40.252 | 318 | 184 | 4 | 14 | 325 | 10 | 327 | 1.68e-84 | 259 |
MS.gene067613.t1 | MTR_2g029820 | 42.532 | 308 | 172 | 3 | 24 | 326 | 25 | 332 | 2.10e-84 | 259 |
MS.gene067613.t1 | MTR_5g017850 | 42.988 | 328 | 177 | 6 | 2 | 324 | 4 | 326 | 7.36e-84 | 257 |
MS.gene067613.t1 | MTR_2g084110 | 44.201 | 319 | 166 | 5 | 10 | 324 | 7 | 317 | 9.56e-84 | 256 |
MS.gene067613.t1 | MTR_2g029830 | 42.623 | 305 | 170 | 3 | 26 | 325 | 26 | 330 | 1.63e-83 | 257 |
MS.gene067613.t1 | MTR_2g084020 | 42.415 | 323 | 175 | 4 | 6 | 324 | 3 | 318 | 3.18e-83 | 255 |
MS.gene067613.t1 | MTR_4g029180 | 45.973 | 298 | 149 | 5 | 32 | 324 | 31 | 321 | 3.85e-83 | 255 |
MS.gene067613.t1 | MTR_2g084090 | 42.547 | 322 | 170 | 5 | 11 | 324 | 4 | 318 | 6.79e-83 | 254 |
MS.gene067613.t1 | MTR_2g029560 | 42.951 | 305 | 169 | 3 | 26 | 325 | 22 | 326 | 1.12e-82 | 254 |
MS.gene067613.t1 | MTR_5g014100 | 45.395 | 304 | 153 | 5 | 32 | 324 | 30 | 331 | 1.12e-82 | 254 |
MS.gene067613.t1 | MTR_7g072510 | 42.089 | 316 | 173 | 3 | 12 | 324 | 4 | 312 | 5.20e-82 | 252 |
MS.gene067613.t1 | MTR_2g029860 | 39.752 | 322 | 188 | 4 | 11 | 326 | 11 | 332 | 5.56e-82 | 253 |
MS.gene067613.t1 | MTR_4g029200 | 43.377 | 302 | 161 | 3 | 26 | 324 | 44 | 338 | 6.06e-82 | 252 |
MS.gene067613.t1 | MTR_2g029850 | 40.810 | 321 | 185 | 3 | 24 | 339 | 25 | 345 | 1.85e-81 | 251 |
MS.gene067613.t1 | MTR_2g084000 | 41.401 | 314 | 173 | 4 | 15 | 324 | 13 | 319 | 2.32e-81 | 250 |
MS.gene067613.t1 | MTR_5g017860 | 42.073 | 328 | 180 | 6 | 2 | 324 | 4 | 326 | 5.23e-81 | 249 |
MS.gene067613.t1 | MTR_4g029190 | 42.540 | 315 | 168 | 5 | 16 | 324 | 33 | 340 | 8.17e-81 | 249 |
MS.gene067613.t1 | MTR_2g029730 | 44.118 | 306 | 164 | 4 | 26 | 325 | 23 | 327 | 1.17e-80 | 249 |
MS.gene067613.t1 | MTR_2g029910 | 39.815 | 324 | 189 | 4 | 24 | 341 | 26 | 349 | 2.98e-80 | 249 |
MS.gene067613.t1 | MTR_4g074995 | 41.693 | 319 | 157 | 7 | 16 | 324 | 9 | 308 | 7.64e-80 | 246 |
MS.gene067613.t1 | MTR_3g467600 | 41.975 | 324 | 171 | 7 | 11 | 324 | 8 | 324 | 1.05e-79 | 246 |
MS.gene067613.t1 | MTR_1g025980 | 40.952 | 315 | 181 | 5 | 10 | 323 | 7 | 317 | 2.34e-79 | 245 |
MS.gene067613.t1 | MTR_4g125940 | 44.203 | 276 | 145 | 4 | 57 | 325 | 2 | 275 | 1.34e-78 | 242 |
MS.gene067613.t1 | MTR_7g072480 | 42.722 | 316 | 171 | 3 | 12 | 324 | 8 | 316 | 6.74e-78 | 241 |
MS.gene067613.t1 | MTR_8g075100 | 41.967 | 305 | 170 | 5 | 22 | 324 | 20 | 319 | 1.01e-77 | 241 |
MS.gene067613.t1 | MTR_4g074990 | 40.938 | 320 | 160 | 6 | 11 | 324 | 9 | 305 | 1.32e-77 | 240 |
MS.gene067613.t1 | MTR_4g133800 | 43.289 | 298 | 157 | 7 | 31 | 324 | 44 | 333 | 1.35e-77 | 241 |
MS.gene067613.t1 | MTR_3g072190 | 46.693 | 257 | 127 | 3 | 71 | 324 | 2 | 251 | 1.53e-77 | 238 |
MS.gene067613.t1 | MTR_1g115900 | 40.483 | 331 | 182 | 6 | 1 | 325 | 1 | 322 | 2.11e-77 | 241 |
MS.gene067613.t1 | MTR_5g022870 | 41.009 | 317 | 181 | 5 | 10 | 324 | 4 | 316 | 1.14e-76 | 238 |
MS.gene067613.t1 | MTR_4g046713 | 38.889 | 324 | 190 | 5 | 8 | 324 | 4 | 326 | 1.27e-76 | 238 |
MS.gene067613.t1 | MTR_0155s0040 | 40.439 | 319 | 172 | 6 | 14 | 324 | 7 | 315 | 2.54e-76 | 237 |
MS.gene067613.t1 | MTR_1g077000 | 39.815 | 324 | 176 | 6 | 10 | 324 | 14 | 327 | 6.90e-75 | 234 |
MS.gene067613.t1 | MTR_7g029030 | 39.185 | 319 | 185 | 5 | 10 | 324 | 7 | 320 | 5.01e-73 | 229 |
MS.gene067613.t1 | MTR_3g092990 | 37.730 | 326 | 199 | 3 | 4 | 325 | 2 | 327 | 2.28e-72 | 228 |
MS.gene067613.t1 | MTR_7g086820 | 38.835 | 309 | 169 | 6 | 26 | 326 | 18 | 314 | 3.01e-72 | 227 |
MS.gene067613.t1 | MTR_4g087965 | 39.296 | 341 | 169 | 9 | 10 | 320 | 10 | 342 | 6.39e-72 | 227 |
MS.gene067613.t1 | MTR_1g009750 | 37.346 | 324 | 190 | 6 | 13 | 324 | 6 | 328 | 7.86e-72 | 226 |
MS.gene067613.t1 | MTR_2g088770 | 39.077 | 325 | 190 | 7 | 5 | 324 | 4 | 325 | 8.16e-72 | 226 |
MS.gene067613.t1 | MTR_2g437770 | 41.611 | 298 | 161 | 6 | 32 | 325 | 54 | 342 | 8.55e-72 | 226 |
MS.gene067613.t1 | MTR_7g107520 | 38.889 | 306 | 180 | 5 | 22 | 324 | 19 | 320 | 9.01e-71 | 223 |
MS.gene067613.t1 | MTR_4g074980 | 38.245 | 319 | 162 | 6 | 12 | 324 | 5 | 294 | 1.34e-69 | 219 |
MS.gene067613.t1 | MTR_5g016010 | 37.255 | 306 | 186 | 4 | 24 | 323 | 23 | 328 | 2.03e-69 | 220 |
MS.gene067613.t1 | MTR_4g074980 | 43.529 | 255 | 130 | 4 | 12 | 258 | 5 | 253 | 4.08e-69 | 217 |
MS.gene067613.t1 | MTR_7g086870 | 37.540 | 309 | 168 | 6 | 26 | 325 | 20 | 312 | 2.65e-68 | 216 |
MS.gene067613.t1 | MTR_2g008710 | 38.509 | 322 | 186 | 6 | 10 | 324 | 9 | 325 | 2.81e-68 | 217 |
MS.gene067613.t1 | MTR_5g074860 | 39.506 | 324 | 137 | 7 | 12 | 323 | 9 | 285 | 2.79e-67 | 213 |
MS.gene067613.t1 | MTR_4g114210 | 37.931 | 319 | 185 | 6 | 14 | 324 | 7 | 320 | 3.30e-67 | 214 |
MS.gene067613.t1 | MTR_8g062780 | 36.875 | 320 | 195 | 4 | 11 | 324 | 6 | 324 | 9.92e-67 | 213 |
MS.gene067613.t1 | MTR_1g038680 | 42.193 | 301 | 167 | 6 | 31 | 324 | 32 | 332 | 6.38e-66 | 211 |
MS.gene067613.t1 | MTR_1g086320 | 38.941 | 321 | 189 | 5 | 11 | 324 | 13 | 333 | 2.77e-65 | 209 |
MS.gene067613.t1 | MTR_6g043280 | 39.130 | 299 | 169 | 7 | 32 | 326 | 45 | 334 | 5.05e-65 | 209 |
MS.gene067613.t1 | MTR_0286s0010 | 38.080 | 323 | 187 | 8 | 10 | 324 | 17 | 334 | 1.23e-64 | 208 |
MS.gene067613.t1 | MTR_6g008075 | 38.080 | 323 | 187 | 8 | 10 | 324 | 17 | 334 | 1.23e-64 | 208 |
MS.gene067613.t1 | MTR_6g027440 | 36.278 | 317 | 195 | 4 | 10 | 324 | 3 | 314 | 1.62e-64 | 207 |
MS.gene067613.t1 | MTR_2g029830 | 41.245 | 257 | 146 | 3 | 74 | 325 | 6 | 262 | 1.61e-63 | 203 |
MS.gene067613.t1 | MTR_1g090760 | 36.677 | 319 | 196 | 5 | 12 | 324 | 12 | 330 | 1.83e-63 | 205 |
MS.gene067613.t1 | MTR_1g086490 | 38.415 | 328 | 188 | 5 | 11 | 324 | 13 | 340 | 2.31e-63 | 205 |
MS.gene067613.t1 | MTR_6g043240 | 38.562 | 306 | 171 | 8 | 28 | 328 | 42 | 335 | 2.35e-63 | 205 |
MS.gene067613.t1 | MTR_5g033470 | 38.188 | 309 | 175 | 6 | 28 | 324 | 73 | 377 | 6.93e-63 | 204 |
MS.gene067613.t1 | MTR_4g132490 | 34.641 | 306 | 194 | 3 | 23 | 324 | 24 | 327 | 1.05e-62 | 202 |
MS.gene067613.t1 | MTR_4g031040 | 60.920 | 174 | 25 | 2 | 87 | 260 | 1 | 131 | 2.72e-62 | 195 |
MS.gene067613.t1 | MTR_3g092990 | 35.890 | 326 | 194 | 4 | 4 | 325 | 2 | 316 | 4.72e-62 | 201 |
MS.gene067613.t1 | MTR_6g043460 | 35.758 | 330 | 188 | 9 | 12 | 326 | 10 | 330 | 6.38e-62 | 201 |
MS.gene067613.t1 | MTR_1g009750 | 34.783 | 322 | 184 | 7 | 13 | 324 | 6 | 311 | 1.76e-60 | 196 |
MS.gene067613.t1 | MTR_2g067440 | 36.391 | 338 | 179 | 7 | 22 | 325 | 54 | 389 | 2.23e-60 | 198 |
MS.gene067613.t1 | MTR_1g066380 | 35.505 | 307 | 184 | 5 | 26 | 325 | 25 | 324 | 6.08e-60 | 196 |
MS.gene067613.t1 | MTR_4g095450 | 34.839 | 310 | 191 | 5 | 20 | 323 | 19 | 323 | 1.66e-59 | 194 |
MS.gene067613.t1 | MTR_4g127670 | 36.455 | 299 | 181 | 5 | 28 | 320 | 24 | 319 | 1.68e-58 | 192 |
MS.gene067613.t1 | MTR_1g066640 | 34.202 | 307 | 188 | 5 | 26 | 325 | 25 | 324 | 3.46e-58 | 191 |
MS.gene067613.t1 | MTR_2g077990 | 36.127 | 346 | 184 | 7 | 16 | 325 | 64 | 408 | 6.42e-58 | 192 |
MS.gene067613.t1 | MTR_2g099175 | 34.754 | 305 | 186 | 5 | 28 | 324 | 36 | 335 | 8.68e-58 | 190 |
MS.gene067613.t1 | MTR_1g066710 | 34.202 | 307 | 188 | 6 | 26 | 325 | 25 | 324 | 1.22e-57 | 189 |
MS.gene067613.t1 | MTR_2g078280 | 36.196 | 326 | 174 | 5 | 16 | 308 | 64 | 388 | 5.88e-57 | 190 |
MS.gene067613.t1 | MTR_1g066680 | 34.853 | 307 | 185 | 6 | 26 | 325 | 25 | 323 | 9.81e-57 | 187 |
MS.gene067613.t1 | MTR_2g078610 | 35.549 | 346 | 186 | 7 | 16 | 325 | 64 | 408 | 4.64e-56 | 188 |
MS.gene067613.t1 | MTR_4g132110 | 32.523 | 329 | 200 | 7 | 11 | 324 | 7 | 328 | 6.31e-55 | 183 |
MS.gene067613.t1 | MTR_2g008160 | 36.570 | 309 | 183 | 8 | 24 | 324 | 20 | 323 | 8.74e-54 | 179 |
MS.gene067613.t1 | MTR_4g132110 | 31.845 | 336 | 202 | 8 | 11 | 326 | 7 | 335 | 1.42e-52 | 177 |
MS.gene067613.t1 | MTR_2g008730 | 34.783 | 322 | 174 | 7 | 10 | 324 | 9 | 301 | 3.87e-51 | 172 |
MS.gene067613.t1 | MTR_3g105790 | 33.538 | 325 | 207 | 6 | 5 | 324 | 2 | 322 | 7.71e-50 | 169 |
MS.gene067613.t1 | MTR_2g067450 | 34.921 | 315 | 187 | 7 | 22 | 325 | 5 | 312 | 9.08e-49 | 166 |
MS.gene067613.t1 | MTR_1g066380 | 34.866 | 261 | 156 | 5 | 72 | 325 | 3 | 256 | 2.36e-46 | 158 |
MS.gene067613.t1 | MTR_0147s0010 | 31.975 | 319 | 180 | 7 | 28 | 323 | 77 | 381 | 1.75e-45 | 159 |
MS.gene067613.t1 | MTR_5g074700 | 40.611 | 229 | 112 | 6 | 101 | 324 | 5 | 214 | 2.79e-42 | 146 |
MS.gene067613.t1 | MTR_3g072210 | 43.005 | 193 | 94 | 5 | 139 | 324 | 55 | 238 | 4.74e-42 | 146 |
MS.gene067613.t1 | MTR_2g008160 | 32.362 | 309 | 161 | 8 | 24 | 324 | 20 | 288 | 1.25e-40 | 144 |
MS.gene067613.t1 | MTR_2g008160 | 41.954 | 174 | 97 | 3 | 24 | 197 | 20 | 189 | 5.22e-40 | 140 |
MS.gene067613.t1 | MTR_3g072260 | 50.388 | 129 | 60 | 1 | 11 | 135 | 5 | 133 | 1.52e-38 | 134 |
MS.gene067613.t1 | MTR_7g072490 | 36.325 | 234 | 89 | 4 | 74 | 307 | 2 | 175 | 7.05e-36 | 129 |
MS.gene067613.t1 | MTR_2g029880 | 38.421 | 190 | 104 | 4 | 140 | 325 | 9 | 189 | 5.47e-34 | 124 |
MS.gene067613.t1 | MTR_3g105790 | 35.043 | 234 | 141 | 6 | 99 | 324 | 16 | 246 | 6.62e-32 | 120 |
MS.gene067613.t1 | MTR_2g077980 | 32.509 | 283 | 137 | 12 | 90 | 325 | 11 | 286 | 5.60e-25 | 102 |
MS.gene067613.t1 | MTR_7g086790 | 34.031 | 191 | 105 | 5 | 75 | 265 | 17 | 186 | 7.54e-25 | 100 |
MS.gene067613.t1 | MTR_2g078560 | 30.631 | 222 | 120 | 4 | 133 | 320 | 95 | 316 | 8.90e-22 | 94.4 |
MS.gene067613.t1 | MTR_5g058120 | 35.625 | 160 | 89 | 4 | 164 | 320 | 7 | 155 | 1.45e-21 | 92.4 |
MS.gene067613.t1 | MTR_6g048160 | 55.556 | 72 | 28 | 2 | 66 | 137 | 21 | 88 | 5.19e-19 | 81.3 |
MS.gene067613.t1 | MTR_3g462850 | 36.364 | 143 | 81 | 5 | 192 | 325 | 9 | 150 | 2.04e-18 | 81.3 |
MS.gene067613.t1 | MTR_4g114220 | 47.619 | 84 | 34 | 2 | 54 | 137 | 29 | 102 | 1.32e-17 | 79.0 |
MS.gene067613.t1 | MTR_1g089005 | 33.333 | 132 | 81 | 2 | 14 | 139 | 1 | 131 | 1.05e-16 | 76.6 |
MS.gene067613.t1 | MTR_7g086810 | 33.333 | 120 | 54 | 2 | 26 | 145 | 4 | 97 | 1.61e-16 | 78.2 |
MS.gene067613.t1 | MTR_3g088160 | 30.412 | 194 | 110 | 4 | 121 | 308 | 180 | 354 | 1.18e-15 | 77.8 |
MS.gene067613.t1 | MTR_3g088160 | 30.412 | 194 | 110 | 4 | 121 | 308 | 180 | 354 | 1.48e-15 | 77.8 |
MS.gene067613.t1 | MTR_1g098320 | 43.902 | 82 | 44 | 1 | 249 | 328 | 47 | 128 | 7.32e-14 | 68.6 |
MS.gene067613.t1 | MTR_7g086785 | 30.216 | 139 | 91 | 2 | 74 | 212 | 4 | 136 | 9.10e-13 | 65.1 |
MS.gene067613.t1 | MTR_4g012865 | 39.726 | 73 | 35 | 1 | 28 | 91 | 77 | 149 | 1.07e-12 | 65.5 |
MS.gene067613.t1 | MTR_2g029930 | 33.333 | 108 | 43 | 3 | 14 | 106 | 1 | 94 | 2.82e-12 | 62.8 |
MS.gene067613.t1 | MTR_3g107060 | 30.488 | 164 | 90 | 6 | 43 | 198 | 91 | 238 | 3.28e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067613.t1 | AT2G22420 | 73.418 | 316 | 84 | 0 | 12 | 327 | 7 | 322 | 2.11e-178 | 497 |
MS.gene067613.t1 | AT2G18150 | 44.817 | 328 | 168 | 4 | 10 | 324 | 9 | 336 | 1.05e-97 | 293 |
MS.gene067613.t1 | AT5G19890 | 46.341 | 328 | 166 | 5 | 3 | 324 | 4 | 327 | 6.36e-97 | 290 |
MS.gene067613.t1 | AT4G36430 | 47.351 | 302 | 155 | 3 | 28 | 325 | 30 | 331 | 8.42e-97 | 290 |
MS.gene067613.t1 | AT5G06730 | 43.598 | 328 | 173 | 4 | 16 | 331 | 14 | 341 | 3.78e-96 | 290 |
MS.gene067613.t1 | AT5G06720 | 44.892 | 323 | 166 | 4 | 15 | 325 | 12 | 334 | 3.57e-95 | 286 |
MS.gene067613.t1 | AT5G66390 | 45.847 | 301 | 159 | 3 | 28 | 324 | 33 | 333 | 5.95e-94 | 283 |
MS.gene067613.t1 | AT2G18140 | 44.954 | 327 | 168 | 4 | 10 | 324 | 9 | 335 | 3.17e-93 | 281 |
MS.gene067613.t1 | AT2G38390 | 44.762 | 315 | 168 | 4 | 24 | 332 | 27 | 341 | 4.72e-92 | 279 |
MS.gene067613.t1 | AT4G08780 | 43.987 | 316 | 170 | 4 | 21 | 329 | 17 | 332 | 8.04e-91 | 275 |
MS.gene067613.t1 | AT4G16270 | 47.475 | 297 | 152 | 4 | 31 | 324 | 53 | 348 | 8.20e-91 | 275 |
MS.gene067613.t1 | AT2G38380 | 44.444 | 315 | 169 | 4 | 24 | 332 | 27 | 341 | 3.43e-90 | 274 |
MS.gene067613.t1 | AT4G08770 | 43.671 | 316 | 171 | 4 | 21 | 329 | 17 | 332 | 1.39e-89 | 272 |
MS.gene067613.t1 | AT3G50990 | 44.224 | 303 | 165 | 3 | 26 | 324 | 39 | 341 | 4.56e-89 | 271 |
MS.gene067613.t1 | AT1G44970 | 45.724 | 304 | 160 | 3 | 26 | 324 | 43 | 346 | 2.10e-88 | 269 |
MS.gene067613.t1 | AT5G05340 | 44.156 | 308 | 158 | 4 | 23 | 324 | 25 | 324 | 1.15e-87 | 266 |
MS.gene067613.t1 | AT5G19880 | 45.171 | 321 | 168 | 5 | 12 | 324 | 9 | 329 | 2.69e-87 | 266 |
MS.gene067613.t1 | AT3G32980 | 43.671 | 316 | 171 | 4 | 23 | 331 | 26 | 341 | 1.18e-86 | 265 |
MS.gene067613.t1 | AT5G58400 | 44.375 | 320 | 165 | 5 | 11 | 324 | 13 | 325 | 8.31e-86 | 262 |
MS.gene067613.t1 | AT1G68850 | 41.369 | 336 | 173 | 7 | 11 | 325 | 4 | 336 | 1.59e-85 | 261 |
MS.gene067613.t1 | AT5G51890 | 42.679 | 321 | 180 | 3 | 6 | 324 | 4 | 322 | 4.20e-85 | 260 |
MS.gene067613.t1 | AT3G49110 | 43.131 | 313 | 171 | 4 | 26 | 331 | 31 | 343 | 4.79e-85 | 261 |
MS.gene067613.t1 | AT3G49120 | 41.456 | 316 | 178 | 4 | 23 | 331 | 27 | 342 | 3.57e-83 | 256 |
MS.gene067613.t1 | AT5G42180 | 41.640 | 317 | 181 | 4 | 8 | 323 | 3 | 316 | 6.43e-82 | 252 |
MS.gene067613.t1 | AT1G14540 | 40.439 | 319 | 180 | 4 | 10 | 324 | 3 | 315 | 2.22e-81 | 250 |
MS.gene067613.t1 | AT2G35380 | 46.078 | 306 | 156 | 5 | 28 | 324 | 30 | 335 | 4.28e-81 | 250 |
MS.gene067613.t1 | AT1G49570 | 43.709 | 302 | 164 | 4 | 25 | 320 | 45 | 346 | 2.76e-80 | 249 |
MS.gene067613.t1 | AT5G58390 | 42.633 | 319 | 170 | 5 | 12 | 324 | 5 | 316 | 3.15e-80 | 247 |
MS.gene067613.t1 | AT5G17820 | 39.875 | 321 | 180 | 6 | 7 | 324 | 3 | 313 | 1.22e-79 | 246 |
MS.gene067613.t1 | AT5G17820 | 39.692 | 325 | 183 | 6 | 3 | 324 | 52 | 366 | 8.12e-79 | 245 |
MS.gene067613.t1 | AT1G14550 | 40.938 | 320 | 175 | 6 | 13 | 324 | 8 | 321 | 1.68e-78 | 243 |
MS.gene067613.t1 | AT3G03670 | 38.318 | 321 | 186 | 4 | 11 | 324 | 6 | 321 | 1.23e-74 | 233 |
MS.gene067613.t1 | AT4G33420 | 42.712 | 295 | 157 | 5 | 32 | 324 | 41 | 325 | 4.81e-74 | 232 |
MS.gene067613.t1 | AT3G49960 | 38.820 | 322 | 190 | 5 | 10 | 324 | 8 | 329 | 5.36e-74 | 232 |
MS.gene067613.t1 | AT4G33420 | 42.712 | 295 | 157 | 5 | 32 | 324 | 88 | 372 | 1.90e-73 | 232 |
MS.gene067613.t1 | AT5G64120 | 39.024 | 328 | 180 | 8 | 11 | 324 | 7 | 328 | 2.52e-73 | 230 |
MS.gene067613.t1 | AT1G05260 | 40.000 | 315 | 182 | 6 | 16 | 325 | 14 | 326 | 1.50e-72 | 228 |
MS.gene067613.t1 | AT3G01190 | 43.168 | 322 | 164 | 10 | 10 | 324 | 12 | 321 | 2.27e-72 | 227 |
MS.gene067613.t1 | AT5G39580 | 39.432 | 317 | 182 | 7 | 12 | 324 | 9 | 319 | 2.28e-72 | 227 |
MS.gene067613.t1 | AT1G71695 | 40.129 | 309 | 172 | 6 | 28 | 330 | 44 | 345 | 1.62e-71 | 226 |
MS.gene067613.t1 | AT2G41480 | 39.628 | 323 | 177 | 7 | 15 | 324 | 11 | 328 | 2.88e-71 | 225 |
MS.gene067613.t1 | AT4G11290 | 38.037 | 326 | 194 | 7 | 6 | 324 | 2 | 326 | 9.69e-71 | 223 |
MS.gene067613.t1 | AT4G37520 | 38.033 | 305 | 183 | 4 | 26 | 324 | 25 | 329 | 1.00e-70 | 223 |
MS.gene067613.t1 | AT5G15180 | 41.776 | 304 | 164 | 7 | 28 | 324 | 32 | 329 | 2.59e-70 | 222 |
MS.gene067613.t1 | AT4G37530 | 38.387 | 310 | 185 | 4 | 21 | 324 | 20 | 329 | 8.86e-70 | 221 |
MS.gene067613.t1 | AT5G67400 | 38.111 | 307 | 184 | 4 | 24 | 324 | 23 | 329 | 3.41e-69 | 219 |
MS.gene067613.t1 | AT3G21770 | 39.048 | 315 | 183 | 6 | 17 | 325 | 18 | 329 | 4.15e-68 | 217 |
MS.gene067613.t1 | AT2G34060 | 38.348 | 339 | 175 | 11 | 12 | 322 | 12 | 344 | 5.22e-68 | 217 |
MS.gene067613.t1 | AT4G37520 | 37.377 | 305 | 182 | 5 | 26 | 324 | 25 | 326 | 8.26e-68 | 216 |
MS.gene067613.t1 | AT1G05240 | 40.134 | 299 | 170 | 6 | 32 | 324 | 30 | 325 | 7.62e-67 | 213 |
MS.gene067613.t1 | AT1G05250 | 40.134 | 299 | 170 | 6 | 32 | 324 | 30 | 325 | 7.62e-67 | 213 |
MS.gene067613.t1 | AT1G77100 | 38.415 | 328 | 175 | 9 | 10 | 324 | 6 | 319 | 2.16e-66 | 212 |
MS.gene067613.t1 | AT4G30170 | 36.774 | 310 | 178 | 6 | 25 | 324 | 24 | 325 | 6.29e-66 | 211 |
MS.gene067613.t1 | AT1G30870 | 40.864 | 301 | 164 | 7 | 32 | 326 | 55 | 347 | 1.12e-64 | 208 |
MS.gene067613.t1 | AT5G47000 | 38.769 | 325 | 185 | 7 | 9 | 324 | 11 | 330 | 2.62e-64 | 207 |
MS.gene067613.t1 | AT3G28200 | 37.624 | 303 | 176 | 5 | 28 | 324 | 21 | 316 | 3.37e-64 | 206 |
MS.gene067613.t1 | AT2G18980 | 35.583 | 326 | 183 | 6 | 12 | 324 | 12 | 323 | 6.26e-64 | 206 |
MS.gene067613.t1 | AT4G17690 | 39.145 | 304 | 173 | 6 | 27 | 324 | 25 | 322 | 6.39e-64 | 206 |
MS.gene067613.t1 | AT5G14130 | 33.739 | 329 | 192 | 5 | 10 | 324 | 14 | 330 | 6.71e-64 | 206 |
MS.gene067613.t1 | AT5G14130 | 33.739 | 329 | 192 | 5 | 10 | 324 | 55 | 371 | 1.69e-63 | 206 |
MS.gene067613.t1 | AT2G39040 | 38.111 | 307 | 178 | 7 | 28 | 324 | 46 | 350 | 7.51e-63 | 204 |
MS.gene067613.t1 | AT4G25980 | 37.097 | 310 | 183 | 6 | 23 | 324 | 21 | 326 | 1.05e-62 | 202 |
MS.gene067613.t1 | AT4G26010 | 38.614 | 303 | 169 | 7 | 26 | 324 | 20 | 309 | 1.41e-62 | 202 |
MS.gene067613.t1 | AT4G26010 | 38.614 | 303 | 169 | 7 | 26 | 324 | 48 | 337 | 1.79e-62 | 202 |
MS.gene067613.t1 | AT1G24110 | 34.069 | 317 | 201 | 5 | 14 | 324 | 8 | 322 | 4.70e-62 | 201 |
MS.gene067613.t1 | AT5G40150 | 37.584 | 298 | 176 | 4 | 32 | 324 | 36 | 328 | 7.40e-62 | 201 |
MS.gene067613.t1 | AT4G37530 | 40.385 | 260 | 151 | 3 | 21 | 276 | 20 | 279 | 1.83e-61 | 198 |
MS.gene067613.t1 | AT5G64100 | 35.329 | 334 | 187 | 9 | 10 | 324 | 8 | 331 | 5.49e-61 | 198 |
MS.gene067613.t1 | AT5G64110 | 38.411 | 302 | 174 | 6 | 29 | 324 | 35 | 330 | 2.76e-60 | 196 |
MS.gene067613.t1 | AT4G21960 | 33.535 | 331 | 200 | 7 | 7 | 324 | 4 | 327 | 3.57e-60 | 196 |
MS.gene067613.t1 | AT3G17070 | 33.929 | 336 | 206 | 5 | 2 | 324 | 7 | 339 | 2.76e-58 | 192 |
MS.gene067613.t1 | AT4G33870 | 33.234 | 334 | 178 | 4 | 28 | 320 | 68 | 397 | 7.96e-58 | 192 |
MS.gene067613.t1 | AT2G24800 | 36.393 | 305 | 184 | 5 | 26 | 324 | 29 | 329 | 1.83e-57 | 189 |
MS.gene067613.t1 | AT1G34510 | 36.111 | 324 | 174 | 10 | 11 | 324 | 9 | 309 | 2.02e-57 | 189 |
MS.gene067613.t1 | AT2G35380 | 44.534 | 247 | 128 | 5 | 87 | 324 | 1 | 247 | 1.23e-56 | 184 |
MS.gene067613.t1 | AT2G37130 | 33.758 | 314 | 193 | 7 | 19 | 324 | 21 | 327 | 1.27e-56 | 187 |
MS.gene067613.t1 | AT5G22410 | 37.338 | 308 | 178 | 7 | 28 | 327 | 28 | 328 | 2.38e-56 | 186 |
MS.gene067613.t1 | AT2G37130 | 34.551 | 301 | 182 | 7 | 32 | 324 | 3 | 296 | 4.31e-56 | 184 |
MS.gene067613.t1 | AT2G43480 | 35.974 | 303 | 178 | 6 | 32 | 324 | 39 | 335 | 1.40e-54 | 182 |
MS.gene067613.t1 | AT5G24070 | 34.211 | 304 | 184 | 6 | 32 | 325 | 39 | 336 | 1.37e-52 | 177 |
MS.gene067613.t1 | AT4G31760 | 33.230 | 322 | 200 | 7 | 11 | 324 | 12 | 326 | 1.62e-52 | 176 |
MS.gene067613.t1 | AT5G39580 | 40.722 | 194 | 110 | 3 | 12 | 205 | 9 | 197 | 2.64e-44 | 152 |
MS.gene067613.t1 | AT3G17070 | 34.328 | 268 | 164 | 5 | 65 | 324 | 13 | 276 | 2.94e-43 | 150 |
MS.gene067613.t1 | AT4G25980 | 42.775 | 173 | 95 | 3 | 23 | 195 | 66 | 234 | 3.99e-40 | 143 |
MS.gene067613.t1 | AT2G24800 | 39.691 | 194 | 107 | 4 | 26 | 213 | 29 | 218 | 7.46e-35 | 128 |
MS.gene067613.t1 | AT1G77490 | 26.936 | 297 | 167 | 10 | 62 | 338 | 106 | 372 | 1.81e-18 | 86.3 |
MS.gene067613.t1 | AT1G77490 | 26.936 | 297 | 167 | 10 | 62 | 338 | 106 | 372 | 2.40e-18 | 85.9 |
MS.gene067613.t1 | AT4G08390 | 26.394 | 269 | 147 | 9 | 62 | 311 | 126 | 362 | 2.34e-15 | 76.6 |
MS.gene067613.t1 | AT4G08390 | 26.394 | 269 | 147 | 9 | 62 | 311 | 127 | 363 | 2.42e-15 | 76.6 |
MS.gene067613.t1 | AT4G08390 | 26.394 | 269 | 147 | 9 | 62 | 311 | 127 | 363 | 2.42e-15 | 76.6 |
MS.gene067613.t1 | AT4G08390 | 26.394 | 269 | 147 | 9 | 62 | 311 | 127 | 363 | 2.42e-15 | 76.6 |
MS.gene067613.t1 | AT3G42570 | 36.842 | 95 | 59 | 1 | 100 | 193 | 53 | 147 | 1.09e-14 | 70.9 |
MS.gene067613.t1 | AT4G08390 | 24.906 | 265 | 130 | 9 | 62 | 311 | 127 | 337 | 8.85e-12 | 65.9 |
Find 60 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGCTGATATCATAATTA+TGG | 0.210247 | 4.1:+69668939 | MS.gene067613:CDS |
TGAAGTTGTTGATGAGATTA+AGG | 0.231611 | 4.1:+69668882 | MS.gene067613:CDS |
TGTTGAAGGAATGTTGAAAT+TGG | 0.241814 | 4.1:+69670090 | MS.gene067613:CDS |
CAACCAAGTCCTTGAAATAT+TGG | 0.258540 | 4.1:-69669961 | None:intergenic |
CCTAACCTCACTTCCCAATT+AGG | 0.274883 | 4.1:-69669617 | None:intergenic |
TGCAGACAGGAGGACCTAAT+TGG | 0.285329 | 4.1:+69669603 | MS.gene067613:intron |
AACTATGCTTGGAGAGAAAT+TGG | 0.290246 | 4.1:+69668828 | MS.gene067613:CDS |
ATAACAGAGGCAACACTTCT+TGG | 0.295424 | 4.1:-69668442 | None:intergenic |
CCTAACTTCACCAGGCTTAT+CGG | 0.331197 | 4.1:-69670125 | None:intergenic |
CTAAATACTGGATCAATTGC+AGG | 0.334629 | 4.1:-69669854 | None:intergenic |
CTCTTGTCTTCAGACAATTT+CGG | 0.335453 | 4.1:-69670175 | None:intergenic |
GGAAGTGAGGTTAGGAAGAT+TGG | 0.339310 | 4.1:+69669625 | MS.gene067613:CDS |
TCAAGTTCTGCTCTAAATAC+TGG | 0.343444 | 4.1:-69669866 | None:intergenic |
CTCACAAACCCCTTTGTTTG+AGG | 0.385011 | 4.1:-69670028 | None:intergenic |
TTCACTTTCCCTCAAACAAA+GGG | 0.399642 | 4.1:+69670019 | MS.gene067613:CDS |
CCGATAAGCCTGGTGAAGTT+AGG | 0.401902 | 4.1:+69670125 | MS.gene067613:CDS |
CTGACGATTGTTTCAGCTTG+TGG | 0.419242 | 4.1:-69668388 | None:intergenic |
GTTGAAGGAATGTTGAAATT+GGG | 0.420650 | 4.1:+69670091 | MS.gene067613:CDS |
AAGGACTTGGTTGGTGGAAG+AGG | 0.432566 | 4.1:+69669971 | MS.gene067613:CDS |
TTTCGATAACCAATATTTCA+AGG | 0.438590 | 4.1:+69669952 | MS.gene067613:CDS |
TCACAAACCCCTTTGTTTGA+GGG | 0.448085 | 4.1:-69670027 | None:intergenic |
CAATTCTTCCTAACTTCACC+AGG | 0.452043 | 4.1:-69670133 | None:intergenic |
TTCTAGAGATGCTGTAGCAC+TGG | 0.460212 | 4.1:+69668963 | MS.gene067613:CDS |
GCAGACAGGAGGACCTAATT+GGG | 0.460309 | 4.1:+69669604 | MS.gene067613:intron |
TAACCAATATTTCAAGGACT+TGG | 0.464692 | 4.1:+69669958 | MS.gene067613:CDS |
AGGGTCAGGCTTTCCGCTAC+CGG | 0.465665 | 4.1:-69669834 | None:intergenic |
AAAGACCTTGTAGCACTCTC+AGG | 0.475027 | 4.1:+69669752 | MS.gene067613:CDS |
TTTCACTTTCCCTCAAACAA+AGG | 0.488533 | 4.1:+69670018 | MS.gene067613:CDS |
GAGGAAGAATAGTGATCAAT+CGG | 0.491248 | 4.1:+69670195 | MS.gene067613:CDS |
ACTGGATCAATTGCAGGGTC+AGG | 0.499134 | 4.1:-69669848 | None:intergenic |
CCTAATTGGGAAGTGAGGTT+AGG | 0.501427 | 4.1:+69669617 | MS.gene067613:CDS |
CAATATTTCAAGGACTTGGT+TGG | 0.502030 | 4.1:+69669962 | MS.gene067613:CDS |
AGAGCGGTAGCATTAGATCT+TGG | 0.511490 | 4.1:-69669695 | None:intergenic |
AATTTCTCTCCAAGCATAGT+TGG | 0.513582 | 4.1:-69668826 | None:intergenic |
ACATCAGCTGATCTTCGACC+TGG | 0.522951 | 4.1:+69668346 | MS.gene067613:CDS |
ATGGTTCAAAACAAAACTAA+AGG | 0.529098 | 4.1:+69668277 | MS.gene067613:CDS |
GTAGCATTAGATCTTGGACT+TGG | 0.533618 | 4.1:-69669689 | None:intergenic |
GATGATACACCAACTATGCT+TGG | 0.538107 | 4.1:+69668817 | MS.gene067613:CDS |
TATTTCAAGGACTTGGTTGG+TGG | 0.538804 | 4.1:+69669965 | MS.gene067613:CDS |
TAATTTGTGAAGGGTTGTGA+TGG | 0.543375 | 4.1:+69668781 | MS.gene067613:intron |
AAATCACAGGAGTTGCATCA+AGG | 0.548807 | 4.1:-69669931 | None:intergenic |
GATGTCGATCAAAATAAGAC+AGG | 0.549535 | 4.1:+69669905 | MS.gene067613:CDS |
TGCCTTTCATTGCAGACAGG+AGG | 0.557468 | 4.1:+69669593 | MS.gene067613:intron |
TTTAGGCTATACAATCAATC+CGG | 0.565740 | 4.1:+69669815 | MS.gene067613:CDS |
GCATTAGAGAAAGCTTGTCC+TGG | 0.567211 | 4.1:+69668907 | MS.gene067613:CDS |
CGAAATTGTCTGAAGACAAG+AGG | 0.581931 | 4.1:+69670176 | MS.gene067613:CDS |
CTATACAATCAATCCGGTAG+CGG | 0.583155 | 4.1:+69669821 | MS.gene067613:CDS |
GACTTGCAGTCCGATAAGCC+TGG | 0.584575 | 4.1:+69670115 | MS.gene067613:CDS |
TCAGCACAAGAAACAACTCC+AGG | 0.586737 | 4.1:-69668925 | None:intergenic |
CTCTCAGGATCACACTCTAT+CGG | 0.590516 | 4.1:+69669767 | MS.gene067613:CDS |
CATCAGCTGATCTTCGACCT+GGG | 0.592449 | 4.1:+69668347 | MS.gene067613:CDS |
TATTGGTTATCGAAAATCAC+AGG | 0.593232 | 4.1:-69669944 | None:intergenic |
AGTTGTTGATGAGATTAAGG+AGG | 0.604842 | 4.1:+69668885 | MS.gene067613:CDS |
TTGGAAGAGATTAATGAGAG+CGG | 0.614681 | 4.1:-69669711 | None:intergenic |
GTGATCCTGAGAGTGCTACA+AGG | 0.617824 | 4.1:-69669757 | None:intergenic |
TAAATACTGGATCAATTGCA+GGG | 0.638216 | 4.1:-69669853 | None:intergenic |
TCACTTTCCCTCAAACAAAG+GGG | 0.650198 | 4.1:+69670020 | MS.gene067613:CDS |
GAGGACCTAATTGGGAAGTG+AGG | 0.676683 | 4.1:+69669612 | MS.gene067613:CDS |
AAATTGAAATCTCATAACAG+AGG | 0.697630 | 4.1:-69668455 | None:intergenic |
CTACAAGGTCTTTAACACTG+AGG | 0.746017 | 4.1:-69669742 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTATTTAAAAAAATAAT+CGG | - | chr4.1:69668692-69668711 | None:intergenic | 0.0% |
!!! | TTCTTTTATGATTTATGAAA+AGG | + | chr4.1:69669017-69669036 | MS.gene067613:intron | 15.0% |
!!! | TTTTATTTTAAAACTGAAAG+TGG | + | chr4.1:69669195-69669214 | MS.gene067613:intron | 15.0% |
!! | AATGAAAGGCAAAAAAAAAT+AGG | - | chr4.1:69669584-69669603 | None:intergenic | 20.0% |
!! | ATGAAAGGCAAAAAAAAATA+GGG | - | chr4.1:69669583-69669602 | None:intergenic | 20.0% |
!! | CTAATTTATATGGACAATAT+TGG | - | chr4.1:69669364-69669383 | None:intergenic | 20.0% |
!! | GAGTATAAATTAGATCAATA+TGG | - | chr4.1:69669294-69669313 | None:intergenic | 20.0% |
!! | TTGAATATGAAGTTTCAATA+AGG | - | chr4.1:69669557-69669576 | None:intergenic | 20.0% |
!!! | TGGCAAAATAAATCTATTTT+AGG | + | chr4.1:69669215-69669234 | MS.gene067613:intron | 20.0% |
!!! | TTGAAAAGATAGAATTTTGA+TGG | - | chr4.1:69668525-69668544 | None:intergenic | 20.0% |
! | AAATTGAAATCTCATAACAG+AGG | - | chr4.1:69668458-69668477 | None:intergenic | 25.0% |
! | ATATGGACAATATTGGAAAA+GGG | - | chr4.1:69669357-69669376 | None:intergenic | 25.0% |
! | ATGGTTCAAAACAAAACTAA+AGG | + | chr4.1:69668277-69668296 | MS.gene067613:CDS | 25.0% |
! | TATATGGACAATATTGGAAA+AGG | - | chr4.1:69669358-69669377 | None:intergenic | 25.0% |
! | TTTCGATAACCAATATTTCA+AGG | + | chr4.1:69669952-69669971 | MS.gene067613:CDS | 25.0% |
!! | TTGTGCTGATATCATAATTA+TGG | + | chr4.1:69668939-69668958 | MS.gene067613:CDS | 25.0% |
!!! | ATGAGTTGTTTAATTTGTGA+AGG | + | chr4.1:69668771-69668790 | MS.gene067613:intron | 25.0% |
!!! | GTGTAATTTTGCTGTTTTTT+TGG | + | chr4.1:69669318-69669337 | MS.gene067613:intron | 25.0% |
!!! | GTTGTTTTTCAATCATGTTT+AGG | + | chr4.1:69669798-69669817 | MS.gene067613:CDS | 25.0% |
!!! | TATGGTAAACATTTTAGCAT+CGG | - | chr4.1:69669276-69669295 | None:intergenic | 25.0% |
!!! | TGAGTTGTTTAATTTGTGAA+GGG | + | chr4.1:69668772-69668791 | MS.gene067613:intron | 25.0% |
!!! | TTTTTCAAAGCATTTGTTGA+AGG | + | chr4.1:69670076-69670095 | MS.gene067613:CDS | 25.0% |
ATGAAGTTTCAATAAGGATC+TGG | - | chr4.1:69669551-69669570 | None:intergenic | 30.0% | |
GTTGAAGGAATGTTGAAATT+GGG | + | chr4.1:69670091-69670110 | MS.gene067613:CDS | 30.0% | |
TAAATACTGGATCAATTGCA+GGG | - | chr4.1:69669856-69669875 | None:intergenic | 30.0% | |
TAACCAATATTTCAAGGACT+TGG | + | chr4.1:69669958-69669977 | MS.gene067613:CDS | 30.0% | |
TCCTTTAATTCAAGGTCAAA+CGG | - | chr4.1:69669443-69669462 | None:intergenic | 30.0% | |
TCGTCTGTGTCTAATTTATA+TGG | - | chr4.1:69669374-69669393 | None:intergenic | 30.0% | |
TGTTGAAGGAATGTTGAAAT+TGG | + | chr4.1:69670090-69670109 | MS.gene067613:CDS | 30.0% | |
TTTAGGCTATACAATCAATC+CGG | + | chr4.1:69669815-69669834 | MS.gene067613:CDS | 30.0% | |
! | TAACACTGAGGTTGTATTTT+TGG | - | chr4.1:69669733-69669752 | None:intergenic | 30.0% |
! | TATTGGTTATCGAAAATCAC+AGG | - | chr4.1:69669947-69669966 | None:intergenic | 30.0% |
! | TGAAGTTGTTGATGAGATTA+AGG | + | chr4.1:69668882-69668901 | MS.gene067613:CDS | 30.0% |
AACTATGCTTGGAGAGAAAT+TGG | + | chr4.1:69668828-69668847 | MS.gene067613:CDS | 35.0% | |
AATTTCTCTCCAAGCATAGT+TGG | - | chr4.1:69668829-69668848 | None:intergenic | 35.0% | |
ACAGACGAAAATAGATTTGG+TGG | + | chr4.1:69669386-69669405 | MS.gene067613:intron | 35.0% | |
ACCGTTTGACCTTGAATTAA+AGG | + | chr4.1:69669439-69669458 | MS.gene067613:intron | 35.0% | |
AGATGTCGTCCTTTAATTCA+AGG | - | chr4.1:69669451-69669470 | None:intergenic | 35.0% | |
CAACCAAGTCCTTGAAATAT+TGG | - | chr4.1:69669964-69669983 | None:intergenic | 35.0% | |
CGGAGAAACACACAAAATAT+TGG | - | chr4.1:69669256-69669275 | None:intergenic | 35.0% | |
CTAAATACTGGATCAATTGC+AGG | - | chr4.1:69669857-69669876 | None:intergenic | 35.0% | |
CTCTTGTCTTCAGACAATTT+CGG | - | chr4.1:69670178-69670197 | None:intergenic | 35.0% | |
GACACAGACGAAAATAGATT+TGG | + | chr4.1:69669383-69669402 | MS.gene067613:intron | 35.0% | |
GAGGAAGAATAGTGATCAAT+CGG | + | chr4.1:69670195-69670214 | MS.gene067613:CDS | 35.0% | |
GATGTCGATCAAAATAAGAC+AGG | + | chr4.1:69669905-69669924 | MS.gene067613:CDS | 35.0% | |
TTCACTTTCCCTCAAACAAA+GGG | + | chr4.1:69670019-69670038 | MS.gene067613:CDS | 35.0% | |
TTGGAAGAGATTAATGAGAG+CGG | - | chr4.1:69669714-69669733 | None:intergenic | 35.0% | |
TTTCACTTTCCCTCAAACAA+AGG | + | chr4.1:69670018-69670037 | MS.gene067613:CDS | 35.0% | |
! | AGTTGTTGATGAGATTAAGG+AGG | + | chr4.1:69668885-69668904 | MS.gene067613:CDS | 35.0% |
! | CAATATTTCAAGGACTTGGT+TGG | + | chr4.1:69669962-69669981 | MS.gene067613:CDS | 35.0% |
! | TAATTTGTGAAGGGTTGTGA+TGG | + | chr4.1:69668781-69668800 | MS.gene067613:intron | 35.0% |
! | TCAAGTTCTGCTCTAAATAC+TGG | - | chr4.1:69669869-69669888 | None:intergenic | 35.0% |
!!! | CATGTTTTTGAGTAATACCC+AGG | - | chr4.1:69668367-69668386 | None:intergenic | 35.0% |
!!! | TTATTTTGATCGACATCTCG+TGG | - | chr4.1:69669902-69669921 | None:intergenic | 35.0% |
AAATCACAGGAGTTGCATCA+AGG | - | chr4.1:69669934-69669953 | None:intergenic | 40.0% | |
ATAACAGAGGCAACACTTCT+TGG | - | chr4.1:69668445-69668464 | None:intergenic | 40.0% | |
CAATTCTTCCTAACTTCACC+AGG | - | chr4.1:69670136-69670155 | None:intergenic | 40.0% | |
CGAAATTGTCTGAAGACAAG+AGG | + | chr4.1:69670176-69670195 | MS.gene067613:CDS | 40.0% | |
CTACAAGGTCTTTAACACTG+AGG | - | chr4.1:69669745-69669764 | None:intergenic | 40.0% | |
CTATACAATCAATCCGGTAG+CGG | + | chr4.1:69669821-69669840 | MS.gene067613:CDS | 40.0% | |
GATGATACACCAACTATGCT+TGG | + | chr4.1:69668817-69668836 | MS.gene067613:CDS | 40.0% | |
GTAGCATTAGATCTTGGACT+TGG | - | chr4.1:69669692-69669711 | None:intergenic | 40.0% | |
TCACTTTCCCTCAAACAAAG+GGG | + | chr4.1:69670020-69670039 | MS.gene067613:CDS | 40.0% | |
! | TATTTCAAGGACTTGGTTGG+TGG | + | chr4.1:69669965-69669984 | MS.gene067613:CDS | 40.0% |
! | TCACAAACCCCTTTGTTTGA+GGG | - | chr4.1:69670030-69670049 | None:intergenic | 40.0% |
! | TTTTGCCTTTCATTGCAGAC+AGG | + | chr4.1:69669590-69669609 | MS.gene067613:intron | 40.0% |
AAAGACCTTGTAGCACTCTC+AGG | + | chr4.1:69669752-69669771 | MS.gene067613:CDS | 45.0% | |
AGAGCGGTAGCATTAGATCT+TGG | - | chr4.1:69669698-69669717 | None:intergenic | 45.0% | |
CCTAACCTCACTTCCCAATT+AGG | - | chr4.1:69669620-69669639 | None:intergenic | 45.0% | |
CCTAACTTCACCAGGCTTAT+CGG | - | chr4.1:69670128-69670147 | None:intergenic | 45.0% | |
CCTAATTGGGAAGTGAGGTT+AGG | + | chr4.1:69669617-69669636 | MS.gene067613:CDS | 45.0% | |
CTCTCAGGATCACACTCTAT+CGG | + | chr4.1:69669767-69669786 | MS.gene067613:CDS | 45.0% | |
CTGACGATTGTTTCAGCTTG+TGG | - | chr4.1:69668391-69668410 | None:intergenic | 45.0% | |
GCATTAGAGAAAGCTTGTCC+TGG | + | chr4.1:69668907-69668926 | MS.gene067613:CDS | 45.0% | |
GGAAGTGAGGTTAGGAAGAT+TGG | + | chr4.1:69669625-69669644 | MS.gene067613:CDS | 45.0% | |
TCAGCACAAGAAACAACTCC+AGG | - | chr4.1:69668928-69668947 | None:intergenic | 45.0% | |
! | CTCACAAACCCCTTTGTTTG+AGG | - | chr4.1:69670031-69670050 | None:intergenic | 45.0% |
! | TTCTAGAGATGCTGTAGCAC+TGG | + | chr4.1:69668963-69668982 | MS.gene067613:CDS | 45.0% |
!!! | TTTATAAAATTATTTTTCTT+TGG | + | chr4.1:69668744-69668763 | MS.gene067613:intron | 5.0% |
!!! | TTTTATTTAAAAAAATAATC+GGG | - | chr4.1:69668691-69668710 | None:intergenic | 5.0% |
!!! | TTTTTAAATAAAATAATGAT+AGG | + | chr4.1:69668698-69668717 | MS.gene067613:intron | 5.0% |
ACATCAGCTGATCTTCGACC+TGG | + | chr4.1:69668346-69668365 | MS.gene067613:CDS | 50.0% | |
ACTGGATCAATTGCAGGGTC+AGG | - | chr4.1:69669851-69669870 | None:intergenic | 50.0% | |
CATCAGCTGATCTTCGACCT+GGG | + | chr4.1:69668347-69668366 | MS.gene067613:CDS | 50.0% | |
CCGATAAGCCTGGTGAAGTT+AGG | + | chr4.1:69670125-69670144 | MS.gene067613:CDS | 50.0% | |
GAGGACCTAATTGGGAAGTG+AGG | + | chr4.1:69669612-69669631 | MS.gene067613:CDS | 50.0% | |
GCAGACAGGAGGACCTAATT+GGG | + | chr4.1:69669604-69669623 | MS.gene067613:intron | 50.0% | |
GTCCTCCTGTCTGCAATGAA+AGG | - | chr4.1:69669598-69669617 | None:intergenic | 50.0% | |
TGCAGACAGGAGGACCTAAT+TGG | + | chr4.1:69669603-69669622 | MS.gene067613:intron | 50.0% | |
TGCCTTTCATTGCAGACAGG+AGG | + | chr4.1:69669593-69669612 | MS.gene067613:intron | 50.0% | |
!! | AAGGACTTGGTTGGTGGAAG+AGG | + | chr4.1:69669971-69669990 | MS.gene067613:CDS | 50.0% |
!! | GTGATCCTGAGAGTGCTACA+AGG | - | chr4.1:69669760-69669779 | None:intergenic | 50.0% |
GACTTGCAGTCCGATAAGCC+TGG | + | chr4.1:69670115-69670134 | MS.gene067613:CDS | 55.0% | |
AGGGTCAGGCTTTCCGCTAC+CGG | - | chr4.1:69669837-69669856 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 69668277 | 69670222 | 69668277 | ID=MS.gene067613 |
chr4.1 | mRNA | 69668277 | 69670222 | 69668277 | ID=MS.gene067613.t1;Parent=MS.gene067613 |
chr4.1 | exon | 69668277 | 69668495 | 69668277 | ID=MS.gene067613.t1.exon1;Parent=MS.gene067613.t1 |
chr4.1 | CDS | 69668277 | 69668495 | 69668277 | ID=cds.MS.gene067613.t1;Parent=MS.gene067613.t1 |
chr4.1 | exon | 69668793 | 69668984 | 69668793 | ID=MS.gene067613.t1.exon2;Parent=MS.gene067613.t1 |
chr4.1 | CDS | 69668793 | 69668984 | 69668793 | ID=cds.MS.gene067613.t1;Parent=MS.gene067613.t1 |
chr4.1 | exon | 69669608 | 69670222 | 69669608 | ID=MS.gene067613.t1.exon3;Parent=MS.gene067613.t1 |
chr4.1 | CDS | 69669608 | 69670222 | 69669608 | ID=cds.MS.gene067613.t1;Parent=MS.gene067613.t1 |
Gene Sequence |
Protein sequence |