Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068884.t1 | XP_003611113.1 | 93.4 | 470 | 25 | 1 | 1 | 470 | 39 | 502 | 3.70E-251 | 877.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068884.t1 | B0X1Q4 | 24.8 | 351 | 221 | 10 | 75 | 401 | 71 | 402 | 7.8e-24 | 113.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068884.t1 | G7KDD6 | 93.4 | 470 | 25 | 1 | 1 | 470 | 39 | 502 | 2.7e-251 | 877.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049396 | MS.gene068884 | 0.800537 | 1.38E-48 | -1.69E-46 |
| MS.gene050400 | MS.gene068884 | 0.823231 | 1.55E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene068884 | 0.802198 | 6.29E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene068884 | 0.831819 | 1.34E-55 | -1.69E-46 |
| MS.gene050971 | MS.gene068884 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene068884 | 0.837304 | 5.63E-57 | -1.69E-46 |
| MS.gene051255 | MS.gene068884 | 0.805998 | 1.02E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene068884 | 0.812189 | 4.80E-51 | -1.69E-46 |
| MS.gene051525 | MS.gene068884 | 0.83507 | 2.08E-56 | -1.69E-46 |
| MS.gene052346 | MS.gene068884 | 0.825828 | 3.79E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene068884 | 0.817383 | 3.39E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene068884 | 0.808133 | 3.60E-50 | -1.69E-46 |
| MS.gene052999 | MS.gene068884 | 0.963734 | 1.89E-122 | -1.69E-46 |
| MS.gene053169 | MS.gene068884 | 0.852398 | 4.74E-61 | -1.69E-46 |
| MS.gene053449 | MS.gene068884 | 0.847135 | 1.40E-59 | -1.69E-46 |
| MS.gene053758 | MS.gene068884 | 0.808962 | 2.39E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene068884 | 0.82257 | 2.21E-53 | -1.69E-46 |
| MS.gene054556 | MS.gene068884 | 0.846096 | 2.69E-59 | -1.69E-46 |
| MS.gene055116 | MS.gene068884 | 0.814661 | 1.37E-51 | -1.69E-46 |
| MS.gene055666 | MS.gene068884 | 0.80772 | 4.40E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene068884 | 0.823773 | 1.16E-53 | -1.69E-46 |
| MS.gene055744 | MS.gene068884 | 0.829618 | 4.65E-55 | -1.69E-46 |
| MS.gene055909 | MS.gene068884 | 0.814855 | 1.25E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene068884 | 0.822225 | 2.65E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene068884 | 0.827468 | 1.54E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene068884 | 0.821355 | 4.22E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene068884 | 0.828653 | 7.98E-55 | -1.69E-46 |
| MS.gene057019 | MS.gene068884 | 0.807147 | 5.83E-50 | -1.69E-46 |
| MS.gene057289 | MS.gene068884 | 0.808694 | 2.73E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene068884 | 0.848859 | 4.69E-60 | -1.69E-46 |
| MS.gene057823 | MS.gene068884 | 0.849762 | 2.63E-60 | -1.69E-46 |
| MS.gene058700 | MS.gene068884 | 0.819593 | 1.07E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene068884 | 0.808627 | 2.82E-50 | -1.69E-46 |
| MS.gene058995 | MS.gene068884 | 0.817279 | 3.58E-52 | -1.69E-46 |
| MS.gene059082 | MS.gene068884 | 0.800222 | 1.59E-48 | -1.69E-46 |
| MS.gene059129 | MS.gene068884 | 0.807601 | 4.67E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene068884 | 0.832427 | 9.51E-56 | -1.69E-46 |
| MS.gene059366 | MS.gene068884 | 0.821457 | 4.00E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene068884 | 0.842627 | 2.30E-58 | -1.69E-46 |
| MS.gene059674 | MS.gene068884 | 0.836503 | 9.01E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene068884 | 0.800824 | 1.20E-48 | -1.69E-46 |
| MS.gene059807 | MS.gene068884 | 0.810155 | 1.33E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene068884 | 0.832398 | 9.67E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene068884 | 0.80221 | 6.25E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene068884 | 0.846474 | 2.12E-59 | -1.69E-46 |
| MS.gene061154 | MS.gene068884 | 0.837406 | 5.30E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068884.t1 | MTR_5g010500 | 94.255 | 470 | 21 | 1 | 1 | 470 | 39 | 502 | 0.0 | 899 |
| MS.gene068884.t1 | MTR_8g031470 | 58.403 | 476 | 186 | 6 | 1 | 468 | 22 | 493 | 0.0 | 582 |
| MS.gene068884.t1 | MTR_8g031450 | 58.643 | 457 | 174 | 7 | 16 | 466 | 61 | 508 | 0.0 | 571 |
| MS.gene068884.t1 | MTR_0014s0440 | 60.325 | 431 | 159 | 4 | 46 | 467 | 75 | 502 | 0.0 | 556 |
| MS.gene068884.t1 | MTR_0014s0440 | 60.325 | 431 | 159 | 4 | 46 | 467 | 64 | 491 | 0.0 | 556 |
| MS.gene068884.t1 | MTR_8g031290 | 54.148 | 458 | 192 | 6 | 9 | 459 | 42 | 488 | 4.10e-179 | 511 |
| MS.gene068884.t1 | MTR_8g031470 | 57.447 | 423 | 132 | 6 | 53 | 468 | 75 | 456 | 1.19e-176 | 503 |
| MS.gene068884.t1 | MTR_7g076860 | 51.889 | 397 | 178 | 4 | 53 | 439 | 3 | 396 | 1.14e-160 | 460 |
| MS.gene068884.t1 | MTR_7g076890 | 51.385 | 397 | 179 | 5 | 53 | 439 | 34 | 426 | 1.58e-158 | 456 |
| MS.gene068884.t1 | MTR_3g464000 | 43.636 | 440 | 221 | 13 | 12 | 437 | 39 | 465 | 1.57e-122 | 365 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068884.t1 | AT5G23850 | 60.369 | 434 | 156 | 5 | 46 | 466 | 104 | 534 | 0.0 | 563 |
| MS.gene068884.t1 | AT3G48980 | 57.271 | 447 | 171 | 6 | 38 | 467 | 95 | 538 | 0.0 | 553 |
| MS.gene068884.t1 | AT3G48980 | 57.271 | 447 | 171 | 6 | 38 | 467 | 89 | 532 | 0.0 | 553 |
| MS.gene068884.t1 | AT1G63420 | 61.353 | 414 | 143 | 4 | 69 | 467 | 164 | 575 | 0.0 | 545 |
| MS.gene068884.t1 | AT3G61270 | 54.195 | 441 | 189 | 4 | 38 | 468 | 56 | 493 | 0.0 | 515 |
| MS.gene068884.t1 | AT2G45830 | 51.168 | 471 | 207 | 6 | 3 | 466 | 60 | 514 | 1.19e-179 | 513 |
| MS.gene068884.t1 | AT2G45830 | 51.168 | 471 | 207 | 6 | 3 | 466 | 60 | 514 | 1.19e-179 | 513 |
| MS.gene068884.t1 | AT2G45830 | 57.333 | 375 | 150 | 3 | 98 | 465 | 1 | 372 | 1.09e-164 | 470 |
| MS.gene068884.t1 | AT2G45830 | 57.333 | 375 | 150 | 3 | 98 | 465 | 1 | 372 | 1.09e-164 | 470 |
| MS.gene068884.t1 | AT2G45830 | 57.333 | 375 | 150 | 3 | 98 | 465 | 1 | 372 | 1.09e-164 | 470 |
| MS.gene068884.t1 | AT2G45830 | 57.333 | 375 | 150 | 3 | 98 | 465 | 1 | 372 | 1.09e-164 | 470 |
| MS.gene068884.t1 | AT3G61270 | 57.029 | 377 | 153 | 3 | 98 | 468 | 1 | 374 | 1.35e-164 | 469 |
| MS.gene068884.t1 | AT3G61280 | 52.414 | 435 | 189 | 6 | 46 | 466 | 100 | 530 | 1.11e-163 | 473 |
| MS.gene068884.t1 | AT2G45840 | 50.808 | 433 | 193 | 4 | 46 | 467 | 92 | 515 | 2.59e-160 | 464 |
| MS.gene068884.t1 | AT3G61290 | 49.772 | 438 | 196 | 6 | 46 | 468 | 18 | 446 | 3.35e-153 | 443 |
| MS.gene068884.t1 | AT1G63420 | 64.865 | 296 | 91 | 3 | 69 | 353 | 164 | 457 | 3.35e-141 | 414 |
| MS.gene068884.t1 | AT1G07220 | 43.880 | 433 | 225 | 10 | 8 | 436 | 55 | 473 | 2.34e-128 | 382 |
| MS.gene068884.t1 | AT3G61280 | 53.307 | 257 | 103 | 5 | 46 | 289 | 100 | 352 | 1.53e-89 | 278 |
Find 106 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGAGAACCTTATGCTTAT+TGG | 0.143284 | 2.1:+46522367 | MS.gene068884:CDS |
| TGCAACATTATTGGCCTATA+AGG | 0.152325 | 2.1:+46522874 | MS.gene068884:CDS |
| TACAGCCATTGCAACATTAT+TGG | 0.224609 | 2.1:+46522865 | MS.gene068884:CDS |
| CATTTGTCAGTGCCCCTTAT+AGG | 0.272815 | 2.1:-46522888 | None:intergenic |
| GCAACATTATTGGCCTATAA+GGG | 0.291368 | 2.1:+46522875 | MS.gene068884:CDS |
| ACTTGACAGGTACAGGAAAT+TGG | 0.312878 | 2.1:+46523243 | MS.gene068884:intron |
| TTTCCCTGACTGGTCCTTCT+GGG | 0.316015 | 2.1:+46521738 | MS.gene068884:CDS |
| CCCAATCCCATGGGCACAAC+AGG | 0.323690 | 2.1:-46521664 | None:intergenic |
| CACAGCTCCACGGCTCCTTC+AGG | 0.333183 | 2.1:-46523378 | None:intergenic |
| ACAGTGTTTGTTGTTGTTGT+TGG | 0.341053 | 2.1:-46521208 | None:intergenic |
| AATTACTGCTTGAACATGTT+TGG | 0.343612 | 2.1:-46521333 | None:intergenic |
| CCAATCAACTGCATGTTTGA+TGG | 0.347036 | 2.1:-46522916 | None:intergenic |
| AGGGGAACAAAAGAGTAAAA+TGG | 0.354181 | 2.1:+46522340 | MS.gene068884:CDS |
| AGTCGTGTTGCGGCAGTATA+AGG | 0.359590 | 2.1:-46522399 | None:intergenic |
| TGGAATATTCATTTAGCAAA+TGG | 0.360170 | 2.1:-46523329 | None:intergenic |
| CCATCAAACATGCAGTTGAT+TGG | 0.367325 | 2.1:+46522916 | MS.gene068884:CDS |
| GCCTGTTGTGCCCATGGGAT+TGG | 0.369989 | 2.1:+46521663 | MS.gene068884:CDS |
| CATCAAACATGCAGTTGATT+GGG | 0.374429 | 2.1:+46522917 | MS.gene068884:CDS |
| CCTGTTGTGCCCATGGGATT+GGG | 0.379519 | 2.1:+46521664 | MS.gene068884:CDS |
| TTATGAGTGAATCCATGGTT+AGG | 0.390989 | 2.1:+46523448 | MS.gene068884:CDS |
| CATTTGCTGCTGCTAAGGTT+TGG | 0.397943 | 2.1:-46521237 | None:intergenic |
| AGAGGTGGGAAGATGAATAT+TGG | 0.400013 | 2.1:+46523571 | MS.gene068884:CDS |
| TGAACATGTTTGGTTCTTGA+TGG | 0.403380 | 2.1:-46521323 | None:intergenic |
| ATGGTACAATTCAGTATTGT+TGG | 0.409096 | 2.1:-46521304 | None:intergenic |
| TGGCTCAAACTTGAGAAGCT+TGG | 0.409168 | 2.1:-46523349 | None:intergenic |
| TTTCCTTTCCAATAAGCATA+AGG | 0.416388 | 2.1:-46522375 | None:intergenic |
| CTAAGTGATGTGGGATCAAA+TGG | 0.418582 | 2.1:-46523507 | None:intergenic |
| CTGACTGGTCCTTCTGGGGT+TGG | 0.423962 | 2.1:+46521743 | MS.gene068884:CDS |
| CTTGTGCAAGCCATGGTCTC+CGG | 0.424836 | 2.1:-46523402 | None:intergenic |
| AGATACAAAGTTTATATTGA+AGG | 0.435834 | 2.1:+46522747 | MS.gene068884:intron |
| CCCTGGTAAAATTCCAGACT+TGG | 0.439877 | 2.1:+46521615 | MS.gene068884:CDS |
| AAAAGGAATAACGAGAGAAA+TGG | 0.456201 | 2.1:+46521450 | MS.gene068884:CDS |
| TCTGTACCTGCGTAAATAAA+CGG | 0.459324 | 2.1:-46522467 | None:intergenic |
| TCAAACATGAGTTCCAAGTC+TGG | 0.465096 | 2.1:-46521628 | None:intergenic |
| GGATCAAATGGAGGAGGCAA+GGG | 0.468934 | 2.1:-46523495 | None:intergenic |
| ACGGCTCCTTCAGGAACTCT+TGG | 0.477411 | 2.1:-46523369 | None:intergenic |
| TATGAGTGAATCCATGGTTA+GGG | 0.480560 | 2.1:+46523449 | MS.gene068884:CDS |
| GTACAGGAAATTGGTAAAGC+CGG | 0.483609 | 2.1:+46523252 | MS.gene068884:CDS |
| AATGGAGGAGGCAAGGGGCA+AGG | 0.487872 | 2.1:-46523489 | None:intergenic |
| CAACCCCAGAAGGACCAGTC+AGG | 0.488262 | 2.1:-46521742 | None:intergenic |
| ATGGAGGAGGCAAGGGGCAA+GGG | 0.489670 | 2.1:-46523488 | None:intergenic |
| AGGAACATTTGCTGCTGCTA+AGG | 0.489940 | 2.1:-46521242 | None:intergenic |
| GAACCTTATGCTTATTGGAA+AGG | 0.492867 | 2.1:+46522372 | MS.gene068884:CDS |
| ATGTTTCAACCGCACAGGAT+TGG | 0.493210 | 2.1:+46522439 | MS.gene068884:CDS |
| CTGAGATTAATATAAGCCCT+TGG | 0.494505 | 2.1:+46522292 | MS.gene068884:CDS |
| CATTTGATCCCACATCACTT+AGG | 0.497579 | 2.1:+46523508 | MS.gene068884:CDS |
| TGGCAGACCAATGTACATAT+AGG | 0.498282 | 2.1:+46522615 | MS.gene068884:CDS |
| AGGTGGTGGGCCCAATCCCA+TGG | 0.502835 | 2.1:-46521674 | None:intergenic |
| TTCTTGAATAAACTTGCTCC+CGG | 0.505080 | 2.1:-46523271 | None:intergenic |
| TTGTAATGTTTCAACCGCAC+AGG | 0.505206 | 2.1:+46522434 | MS.gene068884:CDS |
| GAAATTTATGAGTGAATCCA+TGG | 0.508746 | 2.1:+46523443 | MS.gene068884:CDS |
| TTGTGCAAGCCATGGTCTCC+GGG | 0.511415 | 2.1:-46523401 | None:intergenic |
| CGGTTGAAACATTACAATTG+AGG | 0.511958 | 2.1:-46522428 | None:intergenic |
| AGGAATAACGAGAGAAATGG+TGG | 0.512055 | 2.1:+46521453 | MS.gene068884:CDS |
| TACAGGAAATTGGTAAAGCC+GGG | 0.515192 | 2.1:+46523253 | MS.gene068884:CDS |
| GAGGCTTCACTAATAGTGTA+GGG | 0.515936 | 2.1:-46522815 | None:intergenic |
| AGGAGCCGTGGAGCTGTGCC+CGG | 0.517508 | 2.1:+46523383 | MS.gene068884:CDS |
| GGAGCTGTGCCCGGAGACCA+TGG | 0.520376 | 2.1:+46523392 | MS.gene068884:CDS |
| CGAGGCTTCACTAATAGTGT+AGG | 0.521509 | 2.1:-46522816 | None:intergenic |
| CATCTTCCCACCTCTCAACT+CGG | 0.523375 | 2.1:-46523563 | None:intergenic |
| TATGTCCGGAGTATTTCAAA+TGG | 0.530428 | 2.1:+46521398 | MS.gene068884:CDS |
| GGGATCAAATGGAGGAGGCA+AGG | 0.532099 | 2.1:-46523496 | None:intergenic |
| TTCCCTGACTGGTCCTTCTG+GGG | 0.537571 | 2.1:+46521739 | MS.gene068884:CDS |
| AGGATTCAATCACTCAAACT+TGG | 0.539657 | 2.1:+46522595 | MS.gene068884:CDS |
| TGAGATTAATATAAGCCCTT+GGG | 0.543242 | 2.1:+46522293 | MS.gene068884:CDS |
| TGATAAGCCTGTTGTGCCCA+TGG | 0.553336 | 2.1:+46521657 | MS.gene068884:CDS |
| TAATAGTGTAGGGGAATCAC+AGG | 0.553816 | 2.1:-46522805 | None:intergenic |
| GGTGGAGAAAGCAAAGAAAA+CGG | 0.555442 | 2.1:+46521471 | MS.gene068884:CDS |
| TAATCAACCGAGTTGAGAGG+TGG | 0.563561 | 2.1:+46523556 | MS.gene068884:CDS |
| TGTAGAAGGTTCCCTAACCA+TGG | 0.568492 | 2.1:-46523460 | None:intergenic |
| GGAACTACCTATATGTACAT+TGG | 0.572220 | 2.1:-46522622 | None:intergenic |
| AAGAGTTCCTGAAGGAGCCG+TGG | 0.572482 | 2.1:+46523371 | MS.gene068884:CDS |
| TCCTTCAGAAGATGTTCCCA+AGG | 0.573383 | 2.1:-46522309 | None:intergenic |
| CAACATTATTGGCCTATAAG+GGG | 0.581113 | 2.1:+46522876 | MS.gene068884:CDS |
| AATAATGTTGCAATGGCTGT+AGG | 0.584450 | 2.1:-46522863 | None:intergenic |
| ATCAAACATGCAGTTGATTG+GGG | 0.586497 | 2.1:+46522918 | MS.gene068884:CDS |
| TGAATCCATTTGAAATACTC+CGG | 0.590414 | 2.1:-46521403 | None:intergenic |
| CCCTTGGGAACATCTTCTGA+AGG | 0.592442 | 2.1:+46522308 | MS.gene068884:CDS |
| GGTCTCCGGGCACAGCTCCA+CGG | 0.592499 | 2.1:-46523388 | None:intergenic |
| TGGATTAAAGAGTCTGAACA+AGG | 0.592715 | 2.1:+46522575 | MS.gene068884:CDS |
| GGTGGTGGGCCCAATCCCAT+GGG | 0.595071 | 2.1:-46521673 | None:intergenic |
| TTCACGAGGAACTAAAACCA+TGG | 0.599179 | 2.1:+46521422 | MS.gene068884:CDS |
| ATAGGCCAATAATGTTGCAA+TGG | 0.599822 | 2.1:-46522870 | None:intergenic |
| ATTTAATCAACCGAGTTGAG+AGG | 0.603531 | 2.1:+46523553 | MS.gene068884:CDS |
| TTGGTTACTGTGCTGATCGG+TGG | 0.603838 | 2.1:+46521701 | MS.gene068884:CDS |
| AACCCCAGAAGGACCAGTCA+GGG | 0.609191 | 2.1:-46521741 | None:intergenic |
| GATCAAATGGAGGAGGCAAG+GGG | 0.622941 | 2.1:-46523494 | None:intergenic |
| GAGGAAGTCTAGTCGTGTTG+CGG | 0.623086 | 2.1:-46522409 | None:intergenic |
| GATGTGGGATCAAATGGAGG+AGG | 0.623679 | 2.1:-46523501 | None:intergenic |
| CTGTGCTGATCGGTGGACAC+AGG | 0.626551 | 2.1:+46521708 | MS.gene068884:CDS |
| ATATGATCTTGTGCAAGCCA+TGG | 0.636615 | 2.1:-46523409 | None:intergenic |
| TTTGAGCCAAGAGTTCCTGA+AGG | 0.639566 | 2.1:+46523363 | MS.gene068884:CDS |
| AATCAACCGAGTTGAGAGGT+GGG | 0.639972 | 2.1:+46523557 | MS.gene068884:CDS |
| GAAACTCCGTTTATTTACGC+AGG | 0.643555 | 2.1:+46522461 | MS.gene068884:CDS |
| CCTTCAGAAGATGTTCCCAA+GGG | 0.643671 | 2.1:-46522308 | None:intergenic |
| AAGAACATACCAACCCCAGA+AGG | 0.645283 | 2.1:-46521752 | None:intergenic |
| GATAAGCCTGTTGTGCCCAT+GGG | 0.662497 | 2.1:+46521658 | MS.gene068884:CDS |
| TATTCAAGAAGAGCTCAACA+TGG | 0.666732 | 2.1:+46523284 | MS.gene068884:CDS |
| GTGAAGAAATCGTAGTATCG+AGG | 0.668956 | 2.1:-46522834 | None:intergenic |
| AGTGATGTGGGATCAAATGG+AGG | 0.680524 | 2.1:-46523504 | None:intergenic |
| AGGCTTCACTAATAGTGTAG+GGG | 0.685668 | 2.1:-46522814 | None:intergenic |
| TTTATATTGAAGGATACGCG+TGG | 0.686560 | 2.1:+46522757 | MS.gene068884:CDS |
| TTGCACAAGATCATATTCAG+TGG | 0.688665 | 2.1:+46523416 | MS.gene068884:CDS |
| CAATTACTGAGAAAGTACCC+TGG | 0.713086 | 2.1:+46521598 | MS.gene068884:CDS |
| ACGGAGTTTCCAATCCTGTG+CGG | 0.723022 | 2.1:-46522448 | None:intergenic |
| GTATTTCAAATGGATTCACG+AGG | 0.726284 | 2.1:+46521408 | MS.gene068884:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GACATATTTTATATACTTTA+TGG | + | chr2.1:46522152-46522171 | MS.gene068884:intron | 15.0% |
| !!! | TTTATTTTTTCATTCTTTGT+AGG | - | chr2.1:46521265-46521284 | None:intergenic | 15.0% |
| !! | AGATACAAAGTTTATATTGA+AGG | + | chr2.1:46522747-46522766 | MS.gene068884:intron | 20.0% |
| !! | ATCCAAATAACATAAAAATG+GGG | - | chr2.1:46521840-46521859 | None:intergenic | 20.0% |
| !! | CTAAATTGAAGAGATAATAA+TGG | - | chr2.1:46522008-46522027 | None:intergenic | 20.0% |
| !! | GATCCAAATAACATAAAAAT+GGG | - | chr2.1:46521841-46521860 | None:intergenic | 20.0% |
| !! | TACATTAATCAACAACTATA+TGG | - | chr2.1:46521863-46521882 | None:intergenic | 20.0% |
| !! | TAGTTTAAGTACTAAATTCA+TGG | + | chr2.1:46522225-46522244 | MS.gene068884:intron | 20.0% |
| !! | TTATTCAATAACTAACTAAC+TGG | - | chr2.1:46521972-46521991 | None:intergenic | 20.0% |
| !!! | AAATGTACATGATGAATTTT+GGG | - | chr2.1:46522686-46522705 | None:intergenic | 20.0% |
| !!! | ATATAGTTGTTGATTAATGT+AGG | + | chr2.1:46521862-46521881 | MS.gene068884:intron | 20.0% |
| !!! | ATATTTTGTCACAAATATGT+AGG | + | chr2.1:46522550-46522569 | MS.gene068884:intron | 20.0% |
| !!! | TAAATGTACATGATGAATTT+TGG | - | chr2.1:46522687-46522706 | None:intergenic | 20.0% |
| ! | AAAAACAACGAAAAACAACA+TGG | + | chr2.1:46521375-46521394 | MS.gene068884:CDS | 25.0% |
| ! | AAACTTTGTATCTGATATCA+AGG | - | chr2.1:46522740-46522759 | None:intergenic | 25.0% |
| ! | ATAAAAAATCCTAAGTGATG+TGG | - | chr2.1:46523520-46523539 | None:intergenic | 25.0% |
| ! | GGATCCAAATAACATAAAAA+TGG | - | chr2.1:46521842-46521861 | None:intergenic | 25.0% |
| ! | TAAAAAATCCTAAGTGATGT+GGG | - | chr2.1:46523519-46523538 | None:intergenic | 25.0% |
| ! | TAGTAATTCATGAAATGCAA+TGG | + | chr2.1:46522256-46522275 | MS.gene068884:intron | 25.0% |
| ! | TGGAATATTCATTTAGCAAA+TGG | - | chr2.1:46523332-46523351 | None:intergenic | 25.0% |
| !! | ATATGTGATCTGAGATTAAA+TGG | - | chr2.1:46522646-46522665 | None:intergenic | 25.0% |
| !! | CTTCTGAAGGATATAAAAAA+GGG | + | chr2.1:46522321-46522340 | MS.gene068884:CDS | 25.0% |
| !! | TCTTCTGAAGGATATAAAAA+AGG | + | chr2.1:46522320-46522339 | MS.gene068884:CDS | 25.0% |
| !! | TTCTGAAGGATATAAAAAAG+GGG | + | chr2.1:46522322-46522341 | MS.gene068884:CDS | 25.0% |
| !! | TTTAAGACAAATGAATGACA+AGG | - | chr2.1:46522997-46523016 | None:intergenic | 25.0% |
| !!! | AAATGCAATGGTTTTATTTC+AGG | + | chr2.1:46522268-46522287 | MS.gene068884:intron | 25.0% |
| !!! | AATGCAATGGTTTTATTTCA+GGG | + | chr2.1:46522269-46522288 | MS.gene068884:intron | 25.0% |
| !!! | ATCTTAGTCAAATGTTTTTG+AGG | + | chr2.1:46523090-46523109 | MS.gene068884:intron | 25.0% |
| AAAAGGAATAACGAGAGAAA+TGG | + | chr2.1:46521450-46521469 | MS.gene068884:CDS | 30.0% | |
| AATTACTGCTTGAACATGTT+TGG | - | chr2.1:46521336-46521355 | None:intergenic | 30.0% | |
| AGTAGTAAAGGTTTAAATCG+TGG | + | chr2.1:46523045-46523064 | MS.gene068884:intron | 30.0% | |
| ATGGTACAATTCAGTATTGT+TGG | - | chr2.1:46521307-46521326 | None:intergenic | 30.0% | |
| CTAAAACCATGGAAGAAAAA+AGG | + | chr2.1:46521433-46521452 | MS.gene068884:CDS | 30.0% | |
| GAAATTTATGAGTGAATCCA+TGG | + | chr2.1:46523443-46523462 | MS.gene068884:CDS | 30.0% | |
| GTGGTTATGATATTATATCG+CGG | + | chr2.1:46523064-46523083 | MS.gene068884:intron | 30.0% | |
| TCATTGTCATTCAAAGTTTG+TGG | + | chr2.1:46521885-46521904 | MS.gene068884:intron | 30.0% | |
| TGAGATTAATATAAGCCCTT+GGG | + | chr2.1:46522293-46522312 | MS.gene068884:CDS | 30.0% | |
| TTGTCACAAATATGTAGGAT+TGG | + | chr2.1:46522555-46522574 | MS.gene068884:intron | 30.0% | |
| TTTCCTTTCCAATAAGCATA+AGG | - | chr2.1:46522378-46522397 | None:intergenic | 30.0% | |
| ! | TGAATCCATTTGAAATACTC+CGG | - | chr2.1:46521406-46521425 | None:intergenic | 30.0% |
| !! | AATTGTTGCTTCTAAGATGT+AGG | - | chr2.1:46522127-46522146 | None:intergenic | 30.0% |
| !! | ATTGTTGCTTCTAAGATGTA+GGG | - | chr2.1:46522126-46522145 | None:intergenic | 30.0% |
| !! | GTTTTTAACGTTGTTGTTGT+CGG | - | chr2.1:46521361-46521380 | None:intergenic | 30.0% |
| !!! | GTTATTCCTTTTTTCTTCCA+TGG | - | chr2.1:46521442-46521461 | None:intergenic | 30.0% |
| AATAATGTTGCAATGGCTGT+AGG | - | chr2.1:46522866-46522885 | None:intergenic | 35.0% | |
| ACAGAGAACCTTATGCTTAT+TGG | + | chr2.1:46522367-46522386 | MS.gene068884:CDS | 35.0% | |
| AGGATTCAATCACTCAAACT+TGG | + | chr2.1:46522595-46522614 | MS.gene068884:CDS | 35.0% | |
| AGGGGAACAAAAGAGTAAAA+TGG | + | chr2.1:46522340-46522359 | MS.gene068884:CDS | 35.0% | |
| ATAGGCCAATAATGTTGCAA+TGG | - | chr2.1:46522873-46522892 | None:intergenic | 35.0% | |
| ATCAAACATGCAGTTGATTG+GGG | + | chr2.1:46522918-46522937 | MS.gene068884:CDS | 35.0% | |
| ATGCTTCTTGACAGTAGTAA+AGG | + | chr2.1:46523033-46523052 | MS.gene068884:intron | 35.0% | |
| CAACCTCAATTGTAATTGCA+AGG | + | chr2.1:46523113-46523132 | MS.gene068884:intron | 35.0% | |
| CATCAAACATGCAGTTGATT+GGG | + | chr2.1:46522917-46522936 | MS.gene068884:CDS | 35.0% | |
| CGGTTGAAACATTACAATTG+AGG | - | chr2.1:46522431-46522450 | None:intergenic | 35.0% | |
| CTGAGATTAATATAAGCCCT+TGG | + | chr2.1:46522292-46522311 | MS.gene068884:CDS | 35.0% | |
| GAAAAACAACATGGTATGTC+CGG | + | chr2.1:46521384-46521403 | MS.gene068884:CDS | 35.0% | |
| GAACCTTATGCTTATTGGAA+AGG | + | chr2.1:46522372-46522391 | MS.gene068884:CDS | 35.0% | |
| GATGTAGGGAACAAAATTGA+CGG | - | chr2.1:46522112-46522131 | None:intergenic | 35.0% | |
| GGAACTACCTATATGTACAT+TGG | - | chr2.1:46522625-46522644 | None:intergenic | 35.0% | |
| TACAGCCATTGCAACATTAT+TGG | + | chr2.1:46522865-46522884 | MS.gene068884:CDS | 35.0% | |
| TATGAGTGAATCCATGGTTA+GGG | + | chr2.1:46523449-46523468 | MS.gene068884:CDS | 35.0% | |
| TATTCAAGAAGAGCTCAACA+TGG | + | chr2.1:46523284-46523303 | MS.gene068884:CDS | 35.0% | |
| TCTGTACCTGCGTAAATAAA+CGG | - | chr2.1:46522470-46522489 | None:intergenic | 35.0% | |
| TGGATTAAAGAGTCTGAACA+AGG | + | chr2.1:46522575-46522594 | MS.gene068884:CDS | 35.0% | |
| TTATGAGTGAATCCATGGTT+AGG | + | chr2.1:46523448-46523467 | MS.gene068884:CDS | 35.0% | |
| TTGCACAAGATCATATTCAG+TGG | + | chr2.1:46523416-46523435 | MS.gene068884:CDS | 35.0% | |
| TTTATATTGAAGGATACGCG+TGG | + | chr2.1:46522757-46522776 | MS.gene068884:CDS | 35.0% | |
| ! | ATTTAATCAACCGAGTTGAG+AGG | + | chr2.1:46523553-46523572 | MS.gene068884:CDS | 35.0% |
| ! | CAACATTATTGGCCTATAAG+GGG | + | chr2.1:46522876-46522895 | MS.gene068884:CDS | 35.0% |
| ! | GCAACATTATTGGCCTATAA+GGG | + | chr2.1:46522875-46522894 | MS.gene068884:CDS | 35.0% |
| ! | GTATTTCAAATGGATTCACG+AGG | + | chr2.1:46521408-46521427 | MS.gene068884:CDS | 35.0% |
| ! | TATGTCCGGAGTATTTCAAA+TGG | + | chr2.1:46521398-46521417 | MS.gene068884:CDS | 35.0% |
| ! | TGCAACATTATTGGCCTATA+AGG | + | chr2.1:46522874-46522893 | MS.gene068884:CDS | 35.0% |
| ! | TGGTGGTGAAAAATGGAAAA+GGG | + | chr2.1:46521506-46521525 | MS.gene068884:CDS | 35.0% |
| ! | TTCTTGAATAAACTTGCTCC+CGG | - | chr2.1:46523274-46523293 | None:intergenic | 35.0% |
| !! | ACAGTGTTTGTTGTTGTTGT+TGG | - | chr2.1:46521211-46521230 | None:intergenic | 35.0% |
| !! | GGCCCCATTTTTATGTTATT+TGG | + | chr2.1:46521835-46521854 | MS.gene068884:intron | 35.0% |
| !! | TGAACATGTTTGGTTCTTGA+TGG | - | chr2.1:46521326-46521345 | None:intergenic | 35.0% |
| !! | TTGGTGGTGAAAAATGGAAA+AGG | + | chr2.1:46521505-46521524 | MS.gene068884:CDS | 35.0% |
| !! | TTTAGGTTGGTGGTGAAAAA+TGG | + | chr2.1:46521499-46521518 | MS.gene068884:CDS | 35.0% |
| !!! | TTTTTGGTTACTGTGCTGAT+CGG | + | chr2.1:46521698-46521717 | MS.gene068884:CDS | 35.0% |
| ACACAGGCTCACTAAATCTT+AGG | - | chr2.1:46523143-46523162 | None:intergenic | 40.0% | |
| ACTTGACAGGTACAGGAAAT+TGG | + | chr2.1:46523243-46523262 | MS.gene068884:intron | 40.0% | |
| AGAGGTGGGAAGATGAATAT+TGG | + | chr2.1:46523571-46523590 | MS.gene068884:CDS | 40.0% | |
| AGATTTAGTGAGCCTGTGTT+TGG | + | chr2.1:46523144-46523163 | MS.gene068884:intron | 40.0% | |
| AGGAATAACGAGAGAAATGG+TGG | + | chr2.1:46521453-46521472 | MS.gene068884:CDS | 40.0% | |
| AGGCTTCACTAATAGTGTAG+GGG | - | chr2.1:46522817-46522836 | None:intergenic | 40.0% | |
| AGTAACCAAAAACAGGTGGT+GGG | - | chr2.1:46521690-46521709 | None:intergenic | 40.0% | |
| ATATGATCTTGTGCAAGCCA+TGG | - | chr2.1:46523412-46523431 | None:intergenic | 40.0% | |
| CATTTGATCCCACATCACTT+AGG | + | chr2.1:46523508-46523527 | MS.gene068884:CDS | 40.0% | |
| CCAATCAACTGCATGTTTGA+TGG | - | chr2.1:46522919-46522938 | None:intergenic | 40.0% | |
| CCATCAAACATGCAGTTGAT+TGG | + | chr2.1:46522916-46522935 | MS.gene068884:CDS | 40.0% | |
| CTAAGTGATGTGGGATCAAA+TGG | - | chr2.1:46523510-46523529 | None:intergenic | 40.0% | |
| CTCAATTGTAATTGCAAGGC+AGG | + | chr2.1:46523117-46523136 | MS.gene068884:intron | 40.0% | |
| CTGCCTTGCAATTACAATTG+AGG | - | chr2.1:46523119-46523138 | None:intergenic | 40.0% | |
| GAAACTCCGTTTATTTACGC+AGG | + | chr2.1:46522461-46522480 | MS.gene068884:CDS | 40.0% | |
| GAATATCGAAAGAGATGCGA+TGG | - | chr2.1:46522975-46522994 | None:intergenic | 40.0% | |
| GAGGCTTCACTAATAGTGTA+GGG | - | chr2.1:46522818-46522837 | None:intergenic | 40.0% | |
| GCAGGTACAGACATATCTAA+AGG | + | chr2.1:46522479-46522498 | MS.gene068884:intron | 40.0% | |
| GGTGGAGAAAGCAAAGAAAA+CGG | + | chr2.1:46521471-46521490 | MS.gene068884:CDS | 40.0% | |
| GTACAGGAAATTGGTAAAGC+CGG | + | chr2.1:46523252-46523271 | MS.gene068884:CDS | 40.0% | |
| GTGAAGAAATCGTAGTATCG+AGG | - | chr2.1:46522837-46522856 | None:intergenic | 40.0% | |
| TAATAGTGTAGGGGAATCAC+AGG | - | chr2.1:46522808-46522827 | None:intergenic | 40.0% | |
| TAATTGCAGAATCCCCCAAA+CGG | - | chr2.1:46521584-46521603 | None:intergenic | 40.0% | |
| TACAGGAAATTGGTAAAGCC+GGG | + | chr2.1:46523253-46523272 | MS.gene068884:CDS | 40.0% | |
| TCAAACATGAGTTCCAAGTC+TGG | - | chr2.1:46521631-46521650 | None:intergenic | 40.0% | |
| TCAGCACAGTAACCAAAAAC+AGG | - | chr2.1:46521697-46521716 | None:intergenic | 40.0% | |
| TGGCAGACCAATGTACATAT+AGG | + | chr2.1:46522615-46522634 | MS.gene068884:CDS | 40.0% | |
| TGTACCTGTCAAGTTAGTAG+CGG | - | chr2.1:46523237-46523256 | None:intergenic | 40.0% | |
| TTCACGAGGAACTAAAACCA+TGG | + | chr2.1:46521422-46521441 | MS.gene068884:CDS | 40.0% | |
| TTGTAATGTTTCAACCGCAC+AGG | + | chr2.1:46522434-46522453 | MS.gene068884:CDS | 40.0% | |
| ! | ACGTGATGTTTTCACCGTTT+GGG | + | chr2.1:46521567-46521586 | MS.gene068884:CDS | 40.0% |
| ! | CAAAGAAAACGGCGCATTTT+AGG | + | chr2.1:46521482-46521501 | MS.gene068884:CDS | 40.0% |
| ! | CAAGAAGCATACACGGTATA+TGG | - | chr2.1:46523023-46523042 | None:intergenic | 40.0% |
| ! | CTACTGTCAAGAAGCATACA+CGG | - | chr2.1:46523030-46523049 | None:intergenic | 40.0% |
| ! | TCGTACCTTTGTTATGTCGA+CGG | + | chr2.1:46521945-46521964 | MS.gene068884:intron | 40.0% |
| !! | CAATTACTGAGAAAGTACCC+TGG | + | chr2.1:46521598-46521617 | MS.gene068884:CDS | 40.0% |
| !! | CCAAGTCTGGAATTTTACCA+GGG | - | chr2.1:46521618-46521637 | None:intergenic | 40.0% |
| !! | TCCAAGTCTGGAATTTTACC+AGG | - | chr2.1:46521619-46521638 | None:intergenic | 40.0% |
| AAGAACATACCAACCCCAGA+AGG | - | chr2.1:46521755-46521774 | None:intergenic | 45.0% | |
| AGTGATGTGGGATCAAATGG+AGG | - | chr2.1:46523507-46523526 | None:intergenic | 45.0% | |
| ATGTTTCAACCGCACAGGAT+TGG | + | chr2.1:46522439-46522458 | MS.gene068884:CDS | 45.0% | |
| CAGTAACCAAAAACAGGTGG+TGG | - | chr2.1:46521691-46521710 | None:intergenic | 45.0% | |
| CATTTGTCAGTGCCCCTTAT+AGG | - | chr2.1:46522891-46522910 | None:intergenic | 45.0% | |
| CCCTGGTAAAATTCCAGACT+TGG | + | chr2.1:46521615-46521634 | MS.gene068884:CDS | 45.0% | |
| CCTTCAGAAGATGTTCCCAA+GGG | - | chr2.1:46522311-46522330 | None:intergenic | 45.0% | |
| CGAGGCTTCACTAATAGTGT+AGG | - | chr2.1:46522819-46522838 | None:intergenic | 45.0% | |
| GCACAGTAACCAAAAACAGG+TGG | - | chr2.1:46521694-46521713 | None:intergenic | 45.0% | |
| GCTACTAACTTGACAGGTAC+AGG | + | chr2.1:46523236-46523255 | MS.gene068884:intron | 45.0% | |
| TAATTCCCGTGAAGCATGCT+TGG | + | chr2.1:46521814-46521833 | MS.gene068884:intron | 45.0% | |
| TCCTTCAGAAGATGTTCCCA+AGG | - | chr2.1:46522312-46522331 | None:intergenic | 45.0% | |
| TGGCTCAAACTTGAGAAGCT+TGG | - | chr2.1:46523352-46523371 | None:intergenic | 45.0% | |
| TGTACCGCTACTAACTTGAC+AGG | + | chr2.1:46523230-46523249 | MS.gene068884:intron | 45.0% | |
| TGTAGAAGGTTCCCTAACCA+TGG | - | chr2.1:46523463-46523482 | None:intergenic | 45.0% | |
| TTTGAGCCAAGAGTTCCTGA+AGG | + | chr2.1:46523363-46523382 | MS.gene068884:CDS | 45.0% | |
| ! | AATCAACCGAGTTGAGAGGT+GGG | + | chr2.1:46523557-46523576 | MS.gene068884:CDS | 45.0% |
| ! | AGGAACATTTGCTGCTGCTA+AGG | - | chr2.1:46521245-46521264 | None:intergenic | 45.0% |
| ! | AGGACATTGTTTTCCCTGAC+TGG | + | chr2.1:46521728-46521747 | MS.gene068884:CDS | 45.0% |
| ! | CACGTGATGTTTTCACCGTT+TGG | + | chr2.1:46521566-46521585 | MS.gene068884:CDS | 45.0% |
| ! | CATTTGCTGCTGCTAAGGTT+TGG | - | chr2.1:46521240-46521259 | None:intergenic | 45.0% |
| ! | CGTGATGTTTTCACCGTTTG+GGG | + | chr2.1:46521568-46521587 | MS.gene068884:CDS | 45.0% |
| ! | GTGATGTTTTCACCGTTTGG+GGG | + | chr2.1:46521569-46521588 | MS.gene068884:CDS | 45.0% |
| ! | TAATCAACCGAGTTGAGAGG+TGG | + | chr2.1:46523556-46523575 | MS.gene068884:CDS | 45.0% |
| !! | GAAAACGGCGCATTTTAGGT+TGG | + | chr2.1:46521486-46521505 | MS.gene068884:CDS | 45.0% |
| !! | TAAACTATATAAATATAATA+AGG | - | chr2.1:46522181-46522200 | None:intergenic | 5.0% |
| ACGGAGTTTCCAATCCTGTG+CGG | - | chr2.1:46522451-46522470 | None:intergenic | 50.0% | |
| AGTCGTGTTGCGGCAGTATA+AGG | - | chr2.1:46522402-46522421 | None:intergenic | 50.0% | |
| CATCTTCCCACCTCTCAACT+CGG | - | chr2.1:46523566-46523585 | None:intergenic | 50.0% | |
| CATGATCAATGACGCGACCA+GGG | - | chr2.1:46523175-46523194 | None:intergenic | 50.0% | |
| CCCTTGGGAACATCTTCTGA+AGG | + | chr2.1:46522308-46522327 | MS.gene068884:CDS | 50.0% | |
| CTGGACCGTCGACATAACAA+AGG | - | chr2.1:46521953-46521972 | None:intergenic | 50.0% | |
| GAGGAAGTCTAGTCGTGTTG+CGG | - | chr2.1:46522412-46522431 | None:intergenic | 50.0% | |
| GATAAGCCTGTTGTGCCCAT+GGG | + | chr2.1:46521658-46521677 | MS.gene068884:CDS | 50.0% | |
| GATCAAATGGAGGAGGCAAG+GGG | - | chr2.1:46523497-46523516 | None:intergenic | 50.0% | |
| GATGTGGGATCAAATGGAGG+AGG | - | chr2.1:46523504-46523523 | None:intergenic | 50.0% | |
| GGATCAAATGGAGGAGGCAA+GGG | - | chr2.1:46523498-46523517 | None:intergenic | 50.0% | |
| TGATAAGCCTGTTGTGCCCA+TGG | + | chr2.1:46521657-46521676 | MS.gene068884:CDS | 50.0% | |
| ! | GGGCAAGGGTCTTTTGTAGA+AGG | - | chr2.1:46523477-46523496 | None:intergenic | 50.0% |
| ! | TTGGTTACTGTGCTGATCGG+TGG | + | chr2.1:46521701-46521720 | MS.gene068884:CDS | 50.0% |
| ! | TTTCCCTGACTGGTCCTTCT+GGG | + | chr2.1:46521738-46521757 | MS.gene068884:CDS | 50.0% |
| !! | TTTTCCCTGACTGGTCCTTC+TGG | + | chr2.1:46521737-46521756 | MS.gene068884:CDS | 50.0% |
| !!! | AACGGCGCATTTTAGGTTGG+TGG | + | chr2.1:46521489-46521508 | MS.gene068884:CDS | 50.0% |
| AACCCCAGAAGGACCAGTCA+GGG | - | chr2.1:46521744-46521763 | None:intergenic | 55.0% | |
| AAGAGTTCCTGAAGGAGCCG+TGG | + | chr2.1:46523371-46523390 | MS.gene068884:CDS | 55.0% | |
| ACGGCTCCTTCAGGAACTCT+TGG | - | chr2.1:46523372-46523391 | None:intergenic | 55.0% | |
| ATCAATGACGCGACCAGGGT+CGG | - | chr2.1:46523171-46523190 | None:intergenic | 55.0% | |
| ATGGGGCCAAGCATGCTTCA+CGG | - | chr2.1:46521823-46521842 | None:intergenic | 55.0% | |
| CCATGATCAATGACGCGACC+AGG | - | chr2.1:46523176-46523195 | None:intergenic | 55.0% | |
| CCTGGTCGCGTCATTGATCA+TGG | + | chr2.1:46523173-46523192 | MS.gene068884:intron | 55.0% | |
| CCTGTTGTGCCCATGGGATT+GGG | + | chr2.1:46521664-46521683 | MS.gene068884:CDS | 55.0% | |
| CTTGTGCAAGCCATGGTCTC+CGG | - | chr2.1:46523405-46523424 | None:intergenic | 55.0% | |
| GGGATCAAATGGAGGAGGCA+AGG | - | chr2.1:46523499-46523518 | None:intergenic | 55.0% | |
| TTGTGCAAGCCATGGTCTCC+GGG | - | chr2.1:46523404-46523423 | None:intergenic | 55.0% | |
| ! | TTCCCTGACTGGTCCTTCTG+GGG | + | chr2.1:46521739-46521758 | MS.gene068884:CDS | 55.0% |
| ! | TTGGGCCCACCACCTGTTTT+TGG | + | chr2.1:46521682-46521701 | MS.gene068884:CDS | 55.0% |
| AATGGAGGAGGCAAGGGGCA+AGG | - | chr2.1:46523492-46523511 | None:intergenic | 60.0% | |
| ACCAGGGTCGGTCCAAACAC+AGG | - | chr2.1:46523159-46523178 | None:intergenic | 60.0% | |
| ATGGAGGAGGCAAGGGGCAA+GGG | - | chr2.1:46523491-46523510 | None:intergenic | 60.0% | |
| CAACCCCAGAAGGACCAGTC+AGG | - | chr2.1:46521745-46521764 | None:intergenic | 60.0% | |
| CCCAATCCCATGGGCACAAC+AGG | - | chr2.1:46521667-46521686 | None:intergenic | 60.0% | |
| GCCTGTTGTGCCCATGGGAT+TGG | + | chr2.1:46521663-46521682 | MS.gene068884:CDS | 60.0% | |
| TGGGGCCAAGCATGCTTCAC+GGG | - | chr2.1:46521822-46521841 | None:intergenic | 60.0% | |
| ! | CTGTGCTGATCGGTGGACAC+AGG | + | chr2.1:46521708-46521727 | MS.gene068884:CDS | 60.0% |
| !! | CTGACTGGTCCTTCTGGGGT+TGG | + | chr2.1:46521743-46521762 | MS.gene068884:CDS | 60.0% |
| CACAGCTCCACGGCTCCTTC+AGG | - | chr2.1:46523381-46523400 | None:intergenic | 65.0% | |
| GCCTGTGTTTGGACCGACCC+TGG | + | chr2.1:46523155-46523174 | MS.gene068884:intron | 65.0% | |
| !! | AGGTGGTGGGCCCAATCCCA+TGG | - | chr2.1:46521677-46521696 | None:intergenic | 65.0% |
| !! | GGTGGTGGGCCCAATCCCAT+GGG | - | chr2.1:46521676-46521695 | None:intergenic | 65.0% |
| AGGAGCCGTGGAGCTGTGCC+CGG | + | chr2.1:46523383-46523402 | MS.gene068884:CDS | 70.0% | |
| GGAGCTGTGCCCGGAGACCA+TGG | + | chr2.1:46523392-46523411 | MS.gene068884:CDS | 70.0% | |
| GGTCTCCGGGCACAGCTCCA+CGG | - | chr2.1:46523391-46523410 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 46521178 | 46523608 | 46521178 | ID=MS.gene068884 |
| chr2.1 | mRNA | 46521178 | 46523608 | 46521178 | ID=MS.gene068884.t1;Parent=MS.gene068884 |
| chr2.1 | exon | 46521178 | 46521764 | 46521178 | ID=MS.gene068884.t1.exon1;Parent=MS.gene068884.t1 |
| chr2.1 | CDS | 46521178 | 46521764 | 46521178 | ID=cds.MS.gene068884.t1;Parent=MS.gene068884.t1 |
| chr2.1 | exon | 46522290 | 46522482 | 46522290 | ID=MS.gene068884.t1.exon2;Parent=MS.gene068884.t1 |
| chr2.1 | CDS | 46522290 | 46522482 | 46522290 | ID=cds.MS.gene068884.t1;Parent=MS.gene068884.t1 |
| chr2.1 | exon | 46522572 | 46522636 | 46522572 | ID=MS.gene068884.t1.exon3;Parent=MS.gene068884.t1 |
| chr2.1 | CDS | 46522572 | 46522636 | 46522572 | ID=cds.MS.gene068884.t1;Parent=MS.gene068884.t1 |
| chr2.1 | exon | 46522749 | 46522959 | 46522749 | ID=MS.gene068884.t1.exon4;Parent=MS.gene068884.t1 |
| chr2.1 | CDS | 46522749 | 46522959 | 46522749 | ID=cds.MS.gene068884.t1;Parent=MS.gene068884.t1 |
| chr2.1 | exon | 46523252 | 46523608 | 46523252 | ID=MS.gene068884.t1.exon5;Parent=MS.gene068884.t1 |
| chr2.1 | CDS | 46523252 | 46523608 | 46523252 | ID=cds.MS.gene068884.t1;Parent=MS.gene068884.t1 |
| Gene Sequence |
| Protein sequence |
