AlfalfaGEDB | MS.gene069142

M. sativa cultivar XinJiangDaYe / MS.gene069142

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02701.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069142.t1	XP_003612994.1	95	302	5	4	1	300	43	336	3.80E-132	481.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069142.t1	Q9LSL6	36.8	315	145	13	1	300	41	316	2.8e-35	150.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069142.t1	G7KGJ7	95.0	302	5	4	1	300	43	336	2.7e-132	481.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene069142.t1	TF	C2C2-Dof

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050020	MS.gene069142	0.801727	7.85E-49	-1.69E-46
MS.gene050438	MS.gene069142	0.821684	3.54E-53	-1.69E-46
MS.gene050442	MS.gene069142	0.801953	7.06E-49	-1.69E-46
MS.gene050719	MS.gene069142	0.804953	1.69E-49	-1.69E-46
MS.gene050721	MS.gene069142	0.803632	3.18E-49	-1.69E-46
MS.gene050724	MS.gene069142	0.811673	6.22E-51	-1.69E-46
MS.gene050807	MS.gene069142	0.804832	1.79E-49	-1.69E-46
MS.gene050844	MS.gene069142	0.804153	2.48E-49	-1.69E-46
MS.gene050959	MS.gene069142	0.800137	1.66E-48	-1.69E-46
MS.gene051265	MS.gene069142	0.829678	4.50E-55	-1.69E-46
MS.gene052020	MS.gene069142	0.844279	8.34E-59	-1.69E-46
MS.gene052611	MS.gene069142	0.807492	4.92E-50	-1.69E-46
MS.gene052613	MS.gene069142	0.809503	1.83E-50	-1.69E-46
MS.gene052863	MS.gene069142	0.821268	4.42E-53	-1.69E-46
MS.gene053008	MS.gene069142	0.804328	2.28E-49	-1.69E-46
MS.gene053074	MS.gene069142	0.834341	3.17E-56	-1.69E-46
MS.gene053184	MS.gene069142	0.811229	7.77E-51	-1.69E-46
MS.gene054184	MS.gene069142	0.819455	1.15E-52	-1.69E-46
MS.gene054185	MS.gene069142	0.825643	4.19E-54	-1.69E-46
MS.gene05468	MS.gene069142	0.812426	4.26E-51	-1.69E-46
MS.gene055356	MS.gene069142	0.8313	1.81E-55	-1.69E-46
MS.gene055357	MS.gene069142	0.823719	1.19E-53	-1.69E-46
MS.gene055358	MS.gene069142	0.852233	5.28E-61	-1.69E-46
MS.gene058168	MS.gene069142	0.831817	1.35E-55	-1.69E-46
MS.gene059124	MS.gene069142	0.8052	1.50E-49	-1.69E-46
MS.gene059128	MS.gene069142	0.81793	2.55E-52	-1.69E-46
MS.gene059609	MS.gene069142	0.800412	1.46E-48	-1.69E-46
MS.gene059789	MS.gene069142	0.802868	4.57E-49	-1.69E-46
MS.gene060803	MS.gene069142	0.82751	1.50E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069142.t1	MTR_5g031440	94.702	302	6	4	1	300	43	336	0.0	578
MS.gene069142.t1	MTR_8g068210	48.657	335	109	14	1	300	32	338	1.67e-76	237
MS.gene069142.t1	MTR_8g479350	71.250	80	23	0	1	80	68	147	2.24e-36	133
MS.gene069142.t1	MTR_2g096740	60.000	95	38	0	1	95	62	156	1.11e-35	130
MS.gene069142.t1	MTR_2g096740	60.000	95	38	0	1	95	77	171	1.21e-35	130
MS.gene069142.t1	MTR_4g063780	65.169	89	22	2	1	80	75	163	5.88e-34	126
MS.gene069142.t1	MTR_8g027295	44.848	165	71	6	1	149	24	184	1.08e-32	122
MS.gene069142.t1	MTR_4g088580	68.000	75	24	0	2	76	56	130	1.40e-32	124
MS.gene069142.t1	MTR_7g059400	59.091	110	31	3	2	102	77	181	6.42e-32	121
MS.gene069142.t1	MTR_7g024670	80.000	60	12	0	2	61	78	137	7.21e-31	119
MS.gene069142.t1	MTR_4g022370	81.818	55	10	0	1	55	82	136	4.08e-30	117
MS.gene069142.t1	MTR_3g090430	70.588	68	17	1	3	67	53	120	9.34e-30	115
MS.gene069142.t1	MTR_4g461080	86.792	53	7	0	1	53	29	81	1.12e-29	114
MS.gene069142.t1	MTR_2g093220	83.636	55	9	0	1	55	40	94	1.38e-29	114
MS.gene069142.t1	MTR_4g109980	88.235	51	6	0	1	51	40	90	2.65e-29	114
MS.gene069142.t1	MTR_2g014060	90.196	51	5	0	2	52	26	76	8.33e-29	113
MS.gene069142.t1	MTR_3g091820	80.000	55	11	0	1	55	43	97	9.32e-29	112
MS.gene069142.t1	MTR_8g015840	74.603	63	15	1	1	63	20	81	1.37e-28	109
MS.gene069142.t1	MTR_1g056810	84.906	53	8	0	3	55	14	66	1.76e-28	111
MS.gene069142.t1	MTR_3g077750	84.314	51	8	0	1	51	61	111	4.76e-28	110
MS.gene069142.t1	MTR_1g077600	78.182	55	12	0	1	55	43	97	1.18e-27	108
MS.gene069142.t1	MTR_1g077600	78.182	55	12	0	1	55	43	97	1.20e-27	108
MS.gene069142.t1	MTR_2g014170	83.673	49	8	0	1	49	45	93	1.10e-26	106
MS.gene069142.t1	MTR_8g079060	74.545	55	14	0	1	55	29	83	1.29e-26	104
MS.gene069142.t1	MTR_2g059540	83.673	49	8	0	1	49	31	79	1.33e-26	103
MS.gene069142.t1	MTR_4g089095	73.684	57	14	1	1	57	50	105	6.75e-26	104
MS.gene069142.t1	MTR_4g089095	73.684	57	14	1	1	57	16	71	7.83e-26	103
MS.gene069142.t1	MTR_2g013370	71.930	57	15	1	1	57	46	101	1.53e-25	102
MS.gene069142.t1	MTR_6g012450	72.222	54	15	0	1	54	136	189	8.30e-24	101
MS.gene069142.t1	MTR_4g082060	64.407	59	21	0	1	59	122	180	1.26e-23	100
MS.gene069142.t1	MTR_2g016030	70.370	54	16	0	1	54	47	100	1.32e-23	94.7
MS.gene069142.t1	MTR_7g010950	70.370	54	16	0	1	54	135	188	1.39e-23	100
MS.gene069142.t1	MTR_8g044220	48.936	94	37	2	1	83	118	211	2.55e-23	99.4
MS.gene069142.t1	MTR_7g086780	67.241	58	19	0	1	58	99	156	2.62e-23	99.4
MS.gene069142.t1	MTR_3g435480	66.102	59	20	0	1	59	136	194	4.76e-23	99.0
MS.gene069142.t1	MTR_6g027450	62.069	58	22	0	1	58	89	146	8.94e-23	96.7
MS.gene069142.t1	MTR_6g027460	62.069	58	22	0	1	58	96	153	5.29e-22	95.1
MS.gene069142.t1	MTR_5g041420	68.519	54	17	0	1	54	138	191	1.07e-21	93.6
MS.gene069142.t1	MTR_5g041530	68.519	54	17	0	1	54	140	193	1.87e-21	93.6
MS.gene069142.t1	MTR_5g041380	57.576	66	28	0	1	66	127	192	2.69e-20	90.1
MS.gene069142.t1	MTR_5g041400	64.815	54	19	0	1	54	119	172	4.45e-20	89.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene069142.t1	AT5G65590	44.300	307	133	17	1	300	41	316	3.59e-63	202
MS.gene069142.t1	AT2G28510	44.937	158	82	3	3	156	50	206	3.39e-33	123
MS.gene069142.t1	AT5G60200	76.562	64	15	0	1	64	55	118	6.70e-33	122
MS.gene069142.t1	AT1G51700	80.000	65	12	1	1	64	33	97	1.27e-32	119
MS.gene069142.t1	AT2G37590	82.456	57	10	0	1	57	89	145	2.38e-32	122
MS.gene069142.t1	AT3G55370	76.562	64	15	0	1	64	76	139	1.42e-31	120
MS.gene069142.t1	AT3G55370	76.562	64	15	0	1	64	76	139	1.80e-31	120
MS.gene069142.t1	AT1G07640	85.455	55	8	0	1	55	21	75	2.58e-31	118
MS.gene069142.t1	AT3G55370	76.562	64	15	0	1	64	121	184	2.74e-31	120
MS.gene069142.t1	AT1G07640	85.455	55	8	0	1	55	77	131	3.45e-31	119
MS.gene069142.t1	AT3G21270	88.679	53	6	0	1	53	29	81	4.42e-31	115
MS.gene069142.t1	AT1G07640	85.455	55	8	0	1	55	85	139	4.71e-31	119
MS.gene069142.t1	AT3G52440	61.053	95	26	2	3	97	27	110	5.80e-31	116
MS.gene069142.t1	AT3G52440	61.053	95	26	2	3	97	46	129	1.13e-30	116
MS.gene069142.t1	AT5G02460	83.636	55	9	0	1	55	95	149	2.23e-30	118
MS.gene069142.t1	AT2G28810	84.615	52	8	0	1	52	77	128	2.36e-30	117
MS.gene069142.t1	AT2G28810	84.615	52	8	0	1	52	94	145	3.94e-30	116
MS.gene069142.t1	AT5G60850	79.310	58	12	0	1	58	51	108	4.19e-30	115
MS.gene069142.t1	AT4G38000	66.250	80	26	1	1	79	41	120	2.36e-29	112
MS.gene069142.t1	AT1G28310	78.947	57	12	0	1	57	27	83	2.63e-29	114
MS.gene069142.t1	AT3G45610	72.581	62	17	0	1	62	40	101	4.42e-29	111
MS.gene069142.t1	AT1G28310	78.947	57	12	0	1	57	51	107	4.54e-29	114
MS.gene069142.t1	AT3G61850	52.679	112	42	4	1	111	62	163	1.00e-28	111
MS.gene069142.t1	AT3G61850	52.679	112	42	4	1	111	62	163	1.00e-28	111
MS.gene069142.t1	AT3G61850	52.679	112	42	4	1	111	74	175	1.09e-28	112
MS.gene069142.t1	AT4G21050	73.333	60	16	0	3	62	26	85	1.28e-28	109
MS.gene069142.t1	AT3G61850	52.679	112	42	4	1	111	62	163	1.53e-28	112
MS.gene069142.t1	AT3G61850	52.679	112	42	4	1	111	74	175	1.77e-28	112
MS.gene069142.t1	AT1G21340	70.968	62	18	0	3	64	40	101	1.86e-28	110
MS.gene069142.t1	AT4G24060	78.182	55	12	0	1	55	53	107	5.58e-27	108
MS.gene069142.t1	AT5G62940	84.000	50	8	0	2	51	74	123	6.31e-27	108
MS.gene069142.t1	AT4G00940	79.630	54	11	0	3	56	70	123	7.75e-27	107
MS.gene069142.t1	AT4G00940	79.630	54	11	0	3	56	70	123	7.75e-27	107
MS.gene069142.t1	AT4G00940	79.630	54	11	0	3	56	70	123	7.75e-27	107
MS.gene069142.t1	AT3G50410	74.545	55	14	0	1	55	30	84	2.35e-26	104
MS.gene069142.t1	AT5G66940	64.516	62	22	0	1	62	32	93	1.40e-25	102
MS.gene069142.t1	AT2G46590	81.250	48	9	0	1	48	68	115	2.23e-24	101
MS.gene069142.t1	AT2G46590	81.250	48	9	0	1	48	80	127	2.52e-24	101
MS.gene069142.t1	AT1G64620	78.000	50	11	0	1	50	49	98	3.10e-24	100
MS.gene069142.t1	AT3G47500	55.422	83	33	1	1	83	110	188	1.78e-23	100
MS.gene069142.t1	AT4G21040	66.667	63	20	1	3	64	27	89	2.88e-23	95.9
MS.gene069142.t1	AT2G34140	70.370	54	16	0	1	54	58	111	3.04e-23	94.4
MS.gene069142.t1	AT1G29160	70.370	54	16	0	1	54	62	115	3.34e-23	94.4
MS.gene069142.t1	AT5G62430	70.370	54	16	0	1	54	54	107	3.67e-23	97.1
MS.gene069142.t1	AT1G69570	66.102	59	20	0	1	59	132	190	4.56e-23	98.2
MS.gene069142.t1	AT5G39660	57.746	71	30	0	1	71	138	208	5.40e-23	98.6
MS.gene069142.t1	AT5G39660	57.746	71	30	0	1	71	138	208	5.40e-23	98.6
MS.gene069142.t1	AT5G39660	57.746	71	30	0	1	71	138	208	5.40e-23	98.6
MS.gene069142.t1	AT1G26790	52.381	84	39	1	1	84	111	193	8.37e-23	97.4
MS.gene069142.t1	AT4G21080	65.079	63	21	1	3	64	27	89	1.24e-22	94.7
MS.gene069142.t1	AT1G47655	71.429	49	14	0	1	49	29	77	2.09e-22	93.2
MS.gene069142.t1	AT4G21030	50.000	64	30	1	3	64	23	86	4.24e-14	70.1

Find 40 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCAAGATTCTGAAACAAAA+TGG	0.209045	5.3:-20414290	None:intergenic
TTCTCTTTCTTCACCTTCCA+TGG	0.316516	5.3:+20413880	MS.gene069142:CDS
TTATAATTACCTGATGAAAA+AGG	0.326439	5.3:-20414067	None:intergenic
GCAAAACATGTAGAAGATAT+TGG	0.332074	5.3:+20413705	MS.gene069142:CDS
TTTCTCCAAAAGATGAAAAC+TGG	0.363395	5.3:-20413985	None:intergenic
TCTTCTTCTTCAGAGCTTGT+TGG	0.374369	5.3:+20413839	MS.gene069142:CDS
TGGAATGGTGGTGGTGTTCA+TGG	0.417264	5.3:+20414463	MS.gene069142:CDS
TAGGAGTAGTAGAAATTTGA+GGG	0.447158	5.3:-20413955	None:intergenic
TGTAGAAGATATTGGACAAA+AGG	0.447881	5.3:+20413713	MS.gene069142:CDS
ATGGTGGTGGTGTTCATGGT+TGG	0.454006	5.3:+20414467	MS.gene069142:CDS
TGATTATGAAGTTGAAGTCT+TGG	0.460479	5.3:-20413932	None:intergenic
TCAAGATTCTGAAACAAAAT+GGG	0.479207	5.3:-20414289	None:intergenic
TCTTCTTCAGAGCTTGTTGG+TGG	0.480751	5.3:+20413842	MS.gene069142:CDS
TCTGCTATGAATAACTATCA+TGG	0.480809	5.3:+20414013	MS.gene069142:CDS
GTAGCTTCCAGTGCAAGTCT+TGG	0.484387	5.3:-20414177	None:intergenic
ATAGGAGTAGTAGAAATTTG+AGG	0.486036	5.3:-20413956	None:intergenic
CGCAACGTTCCAATCGGTGG+TGG	0.493729	5.3:+20413746	MS.gene069142:CDS
GTGTTGGGAGAGTCACATCT+TGG	0.514485	5.3:-20413632	None:intergenic
CCTACTGCAAGTGGTGGAGC+TGG	0.519120	5.3:+20414421	MS.gene069142:CDS
TTTCTACATCCACCACCGAT+TGG	0.522050	5.3:-20413755	None:intergenic
GGTGGAGCTGGACATGATAG+TGG	0.524755	5.3:+20414433	MS.gene069142:CDS
AATTATAATGGTGCAATACA+AGG	0.531532	5.3:+20414082	MS.gene069142:CDS
GCTTTACGCAACGTTCCAAT+CGG	0.531943	5.3:+20413740	MS.gene069142:CDS
CTATGAACCAAGACTTGCAC+TGG	0.534331	5.3:+20414170	MS.gene069142:CDS
TGGAAGGTGAAGAAAGAGAA+TGG	0.535036	5.3:-20413877	None:intergenic
GACATGATAGTGGAAGCAAC+TGG	0.536262	5.3:+20414443	MS.gene069142:CDS
TGAAACAAAATGGGTTGTAG+TGG	0.541174	5.3:-20414280	None:intergenic
TCTGTTGGAAATTCAAGAAG+AGG	0.543611	5.3:+20414340	MS.gene069142:CDS
GATGAAAACTGGTTATACAT+AGG	0.549549	5.3:-20413974	None:intergenic
AGAAGATATTGGACAAAAGG+TGG	0.584366	5.3:+20413716	MS.gene069142:CDS
ACTACCAAGATGAAAATCCA+TGG	0.598151	5.3:-20413897	None:intergenic
CCAAGATGAAAATCCATGGA+AGG	0.609817	5.3:-20413893	None:intergenic
TTACGCAACGTTCCAATCGG+TGG	0.621443	5.3:+20413743	MS.gene069142:CDS
CCAGCTCCACCACTTGCAGT+AGG	0.633722	5.3:-20414421	None:intergenic
GGAAGCAACTGGAATGGTGG+TGG	0.653313	5.3:+20414454	MS.gene069142:CDS
AGTGGAAGCAACTGGAATGG+TGG	0.673960	5.3:+20414451	MS.gene069142:CDS
GCTGCTACACCTACTGCAAG+TGG	0.675331	5.3:+20414412	MS.gene069142:CDS
GCTACACCTACTGCAAGTGG+TGG	0.683188	5.3:+20414415	MS.gene069142:CDS
GATAGTGGAAGCAACTGGAA+TGG	0.689100	5.3:+20414448	MS.gene069142:CDS
GAGAAGATACAGCAACTGAG+TGG	0.693063	5.3:+20414362	MS.gene069142:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATAATTACCTGATGAAAA+AGG	-	chr5.3:20414070-20414089	None:intergenic	20.0%
!!!	TTTTCATCAGGTAATTATAA+TGG	+	chr5.3:20414070-20414089	MS.gene069142:CDS	20.0%
!	AATTATAATGGTGCAATACA+AGG	+	chr5.3:20414082-20414101	MS.gene069142:CDS	25.0%
!!	CAAAGATTATCTATGCTTTT+TGG	+	chr5.3:20414205-20414224	MS.gene069142:CDS	25.0%
!!	TATAACCAGTTTTCATCTTT+TGG	+	chr5.3:20413980-20413999	MS.gene069142:CDS	25.0%
!!!	TCAAGATTCTGAAACAAAAT+GGG	-	chr5.3:20414292-20414311	None:intergenic	25.0%
	ATAGGAGTAGTAGAAATTTG+AGG	-	chr5.3:20413959-20413978	None:intergenic	30.0%
	GATGAAAACTGGTTATACAT+AGG	-	chr5.3:20413977-20413996	None:intergenic	30.0%
	GCAAAACATGTAGAAGATAT+TGG	+	chr5.3:20413705-20413724	MS.gene069142:CDS	30.0%
	TAGGAGTAGTAGAAATTTGA+GGG	-	chr5.3:20413958-20413977	None:intergenic	30.0%
	TCTGCTATGAATAACTATCA+TGG	+	chr5.3:20414013-20414032	MS.gene069142:CDS	30.0%
	TGATTATGAAGTTGAAGTCT+TGG	-	chr5.3:20413935-20413954	None:intergenic	30.0%
	TGTAGAAGATATTGGACAAA+AGG	+	chr5.3:20413713-20413732	MS.gene069142:CDS	30.0%
	TTTCTCCAAAAGATGAAAAC+TGG	-	chr5.3:20413988-20414007	None:intergenic	30.0%
!	TAGTAGCAGAATTTTGTGTT+GGG	-	chr5.3:20413650-20413669	None:intergenic	30.0%
!!	AGATTATCTATGCTTTTTGG+TGG	+	chr5.3:20414208-20414227	MS.gene069142:CDS	30.0%
!!	ATGAACTATCCTTTTTCATC+AGG	+	chr5.3:20414058-20414077	MS.gene069142:CDS	30.0%
!!	CATTTTGTTTCAGAATCTTG+AGG	+	chr5.3:20414291-20414310	MS.gene069142:CDS	30.0%
!!	CTCAAGATTCTGAAACAAAA+TGG	-	chr5.3:20414293-20414312	None:intergenic	30.0%
!!!	TGGTTTTTTGGGAATTCTTA+TGG	+	chr5.3:20414382-20414401	MS.gene069142:CDS	30.0%
	ACTACCAAGATGAAAATCCA+TGG	-	chr5.3:20413900-20413919	None:intergenic	35.0%
	AGAAGATATTGGACAAAAGG+TGG	+	chr5.3:20413716-20413735	MS.gene069142:CDS	35.0%
	TCTGTTGGAAATTCAAGAAG+AGG	+	chr5.3:20414340-20414359	MS.gene069142:CDS	35.0%
!	ATGGATTTTCATCTTGGTAG+TGG	+	chr5.3:20413899-20413918	MS.gene069142:CDS	35.0%
!	CATGTTTTGCAGAAATGTCT+TGG	-	chr5.3:20413695-20413714	None:intergenic	35.0%
!	GTAGTAGCAGAATTTTGTGT+TGG	-	chr5.3:20413651-20413670	None:intergenic	35.0%
!!	GATGATAGAGCTTTTTCTGT+TGG	+	chr5.3:20414325-20414344	MS.gene069142:CDS	35.0%
!!	TGAAACAAAATGGGTTGTAG+TGG	-	chr5.3:20414283-20414302	None:intergenic	35.0%
!!	TTATCTATGCTTTTTGGTGG+TGG	+	chr5.3:20414211-20414230	MS.gene069142:CDS	35.0%
	CCAAGATGAAAATCCATGGA+AGG	-	chr5.3:20413896-20413915	None:intergenic	40.0%
	TCTTCTTCTTCAGAGCTTGT+TGG	+	chr5.3:20413839-20413858	MS.gene069142:CDS	40.0%
	TGGAAGGTGAAGAAAGAGAA+TGG	-	chr5.3:20413880-20413899	None:intergenic	40.0%
	TTCTCTTTCTTCACCTTCCA+TGG	+	chr5.3:20413880-20413899	MS.gene069142:CDS	40.0%
!	CCTTCCATGGATTTTCATCT+TGG	+	chr5.3:20413893-20413912	MS.gene069142:CDS	40.0%
!!!	ACAGCAACTGAGTGGTTTTT+TGG	+	chr5.3:20414370-20414389	MS.gene069142:CDS	40.0%
!!!	CAGCAACTGAGTGGTTTTTT+GGG	+	chr5.3:20414371-20414390	MS.gene069142:CDS	40.0%
	CTATGAACCAAGACTTGCAC+TGG	+	chr5.3:20414170-20414189	MS.gene069142:CDS	45.0%
	GAGAAGATACAGCAACTGAG+TGG	+	chr5.3:20414362-20414381	MS.gene069142:CDS	45.0%
	GCTTTACGCAACGTTCCAAT+CGG	+	chr5.3:20413740-20413759	MS.gene069142:CDS	45.0%
	TTTCTACATCCACCACCGAT+TGG	-	chr5.3:20413758-20413777	None:intergenic	45.0%
!!	GACATGATAGTGGAAGCAAC+TGG	+	chr5.3:20414443-20414462	MS.gene069142:CDS	45.0%
!!	GATAGTGGAAGCAACTGGAA+TGG	+	chr5.3:20414448-20414467	MS.gene069142:CDS	45.0%
!!	TCTTCTTCAGAGCTTGTTGG+TGG	+	chr5.3:20413842-20413861	MS.gene069142:CDS	45.0%
	AGTGGAAGCAACTGGAATGG+TGG	+	chr5.3:20414451-20414470	MS.gene069142:CDS	50.0%
	GTAGCTTCCAGTGCAAGTCT+TGG	-	chr5.3:20414180-20414199	None:intergenic	50.0%
	GTGTTGGGAGAGTCACATCT+TGG	-	chr5.3:20413635-20413654	None:intergenic	50.0%
	TTACGCAACGTTCCAATCGG+TGG	+	chr5.3:20413743-20413762	MS.gene069142:CDS	50.0%
!!	ATGGTGGTGGTGTTCATGGT+TGG	+	chr5.3:20414467-20414486	MS.gene069142:CDS	50.0%
!!	TGGAATGGTGGTGGTGTTCA+TGG	+	chr5.3:20414463-20414482	MS.gene069142:CDS	50.0%
	GCTACACCTACTGCAAGTGG+TGG	+	chr5.3:20414415-20414434	MS.gene069142:CDS	55.0%
	GCTGCTACACCTACTGCAAG+TGG	+	chr5.3:20414412-20414431	MS.gene069142:CDS	55.0%
	GGAAGCAACTGGAATGGTGG+TGG	+	chr5.3:20414454-20414473	MS.gene069142:CDS	55.0%
	GGTGGAGCTGGACATGATAG+TGG	+	chr5.3:20414433-20414452	MS.gene069142:CDS	55.0%
	CCAGCTCCACCACTTGCAGT+AGG	-	chr5.3:20414424-20414443	None:intergenic	60.0%
	CGCAACGTTCCAATCGGTGG+TGG	+	chr5.3:20413746-20413765	MS.gene069142:CDS	60.0%
!	CCTACTGCAAGTGGTGGAGC+TGG	+	chr5.3:20414421-20414440	MS.gene069142:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	20413623	20414525	20413623	ID=MS.gene069142
chr5.3	mRNA	20413623	20414525	20413623	ID=MS.gene069142.t1;Parent=MS.gene069142
chr5.3	exon	20413623	20414525	20413623	ID=MS.gene069142.t1.exon1;Parent=MS.gene069142.t1
chr5.3	CDS	20413623	20414525	20413623	ID=cds.MS.gene069142.t1;Parent=MS.gene069142.t1

Gene Sequence

>MS.gene069142

ATGAAGTGTCCAAGATGTGACTCTCCCAACACAAAATTCTGCTACTACAACAACTATAGCTTAACACAACCAAGACATTTCTGCAAAACATGTAGAAGATATTGGACAAAAGGTGGAGCTTTACGCAACGTTCCAATCGGTGGTGGATGTAGAAAAAACAAGAAAATGAAATCATCATCATCATCAAGACTCTCTTGTGATTCAAAAGACTCAGCTTCTTCTTCTTCAGAGCTTGTTGGTGGCTTGAAATTTCTCCATTCTCTTTCTTCACCTTCCATGGATTTTCATCTTGGTAGTGGTTTATCTTTTCCAAGACTTCAACTTCATAATCACCCTCAAATTTCTACTACTCCTATGTATAACCAGTTTTCATCTTTTGGAGAAACTTCTTCTGCTATGAATAACTATCATGGTTCTTCAAATTCTGTTGCTGCTATGAACTATCCTTTTTCATCAGGTAATTATAATGGTGCAATACAAGGTATGACTTCAATGAATATTAATCATAGCAATAATAATATTGCTTCTTCTATTGAATCATTGAGTTCTATGAACCAAGACTTGCACTGGAAGCTACAGCAACAAAGATTATCTATGCTTTTTGGTGGTGGAGAAAATCAGAAAGATAATAACAATCTGCAGAATCAAACAGAAAAGCCACTACAACCCATTTTGTTTCAGAATCTTGAGGTTGCAAAGCAAGATGATAGAGCTTTTTCTGTTGGAAATTCAAGAAGAGGAGAAGATACAGCAACTGAGTGGTTTTTTGGGAATTCTTATGGTTCAGCTGCTGCTACACCTACTGCAAGTGGTGGAGCTGGACATGATAGTGGAAGCAACTGGAATGGTGGTGGTGTTCATGGTTGGAGTGATGTGCAACAGCAATATAGTGCTTTGCCCTAG

Protein sequence

>MS.gene069142.t1

MKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKMKSSSSSRLSCDSKDSASSSSELVGGLKFLHSLSSPSMDFHLGSGLSFPRLQLHNHPQISTTPMYNQFSSFGETSSAMNNYHGSSNSVAAMNYPFSSGNYNGAIQGMTSMNINHSNNNIASSIESLSSMNQDLHWKLQQQRLSMLFGGGENQKDNNNLQNQTEKPLQPILFQNLEVAKQDDRAFSVGNSRRGEDTATEWFFGNSYGSAAATPTASGGAGHDSGSNWNGGGVHGWSDVQQQYSALP