Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070038.t1 | XP_003628399.1 | 96.8 | 316 | 10 | 0 | 3 | 318 | 673 | 988 | 1.80E-172 | 615.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070038.t1 | Q9SAJ3 | 78.1 | 315 | 69 | 0 | 3 | 317 | 693 | 1007 | 8.1e-142 | 504.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070038.t1 | G7LB10 | 96.8 | 316 | 10 | 0 | 3 | 318 | 673 | 988 | 1.3e-172 | 615.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene070038 | 0.848501 | 5.89E-60 | -1.69E-46 |
| MS.gene049758 | MS.gene070038 | 0.84491 | 5.64E-59 | -1.69E-46 |
| MS.gene050099 | MS.gene070038 | 0.831881 | 1.30E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene070038 | 0.819475 | 1.14E-52 | -1.69E-46 |
| MS.gene050529 | MS.gene070038 | 0.802663 | 5.04E-49 | -1.69E-46 |
| MS.gene050558 | MS.gene070038 | 0.840088 | 1.07E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene070038 | 0.833487 | 5.19E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene070038 | 0.835704 | 1.44E-56 | -1.69E-46 |
| MS.gene051662 | MS.gene070038 | 0.886197 | 4.22E-72 | -1.69E-46 |
| MS.gene051663 | MS.gene070038 | 0.85088 | 1.28E-60 | -1.69E-46 |
| MS.gene051860 | MS.gene070038 | 0.813255 | 2.81E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene070038 | 0.809072 | 2.27E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene070038 | 0.806811 | 6.86E-50 | -1.69E-46 |
| MS.gene052256 | MS.gene070038 | 0.820135 | 8.05E-53 | -1.69E-46 |
| MS.gene052600 | MS.gene070038 | 0.819238 | 1.29E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene070038 | 0.862126 | 6.32E-64 | -1.69E-46 |
| MS.gene053907 | MS.gene070038 | 0.845022 | 5.26E-59 | -1.69E-46 |
| MS.gene053971 | MS.gene070038 | 0.821095 | 4.84E-53 | -1.69E-46 |
| MS.gene054942 | MS.gene070038 | 0.875647 | 2.61E-68 | -1.69E-46 |
| MS.gene054983 | MS.gene070038 | 0.808275 | 3.36E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene070038 | 0.808101 | 3.65E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene070038 | 0.818665 | 1.74E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene070038 | 0.866031 | 3.84E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene070038 | 0.839416 | 1.61E-57 | -1.69E-46 |
| MS.gene056612 | MS.gene070038 | 0.836524 | 8.90E-57 | -1.69E-46 |
| MS.gene056979 | MS.gene070038 | 0.809905 | 1.50E-50 | -1.69E-46 |
| MS.gene057121 | MS.gene070038 | 0.88032 | 6.05E-70 | -1.69E-46 |
| MS.gene057245 | MS.gene070038 | 0.839802 | 1.27E-57 | -1.69E-46 |
| MS.gene057260 | MS.gene070038 | 0.831071 | 2.06E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene070038 | 0.867737 | 1.10E-65 | -1.69E-46 |
| MS.gene058002 | MS.gene070038 | 0.824611 | 7.35E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene070038 | 0.831364 | 1.74E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene070038 | 0.812468 | 4.18E-51 | -1.69E-46 |
| MS.gene058845 | MS.gene070038 | 0.825693 | 4.08E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene070038 | 0.818963 | 1.49E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene070038 | 0.821112 | 4.80E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene070038 | 0.818992 | 1.47E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene070038 | 0.811986 | 5.32E-51 | -1.69E-46 |
| MS.gene06090 | MS.gene070038 | 0.815986 | 6.98E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene070038 | 0.803361 | 3.62E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070038.t1 | MTR_8g056860 | 96.835 | 316 | 10 | 0 | 3 | 318 | 673 | 988 | 0.0 | 635 |
| MS.gene070038.t1 | MTR_3g115110 | 31.579 | 266 | 159 | 5 | 3 | 267 | 448 | 691 | 1.68e-33 | 130 |
| MS.gene070038.t1 | MTR_4g094662 | 31.228 | 285 | 167 | 7 | 4 | 286 | 429 | 686 | 9.84e-30 | 119 |
| MS.gene070038.t1 | MTR_2g438140 | 31.387 | 274 | 158 | 7 | 4 | 275 | 426 | 671 | 1.75e-27 | 113 |
| MS.gene070038.t1 | MTR_7g010800 | 32.482 | 274 | 156 | 8 | 4 | 275 | 406 | 652 | 2.31e-27 | 112 |
| MS.gene070038.t1 | MTR_2g438140 | 35.503 | 169 | 92 | 5 | 4 | 170 | 486 | 639 | 1.44e-19 | 89.7 |
| MS.gene070038.t1 | MTR_3g115110 | 28.643 | 199 | 126 | 4 | 73 | 267 | 298 | 484 | 3.97e-18 | 85.1 |
| MS.gene070038.t1 | MTR_3g104470 | 29.434 | 265 | 149 | 10 | 8 | 270 | 425 | 653 | 2.29e-16 | 80.1 |
| MS.gene070038.t1 | MTR_3g104480 | 28.889 | 270 | 154 | 10 | 8 | 275 | 423 | 656 | 2.53e-16 | 80.1 |
| MS.gene070038.t1 | MTR_4g064350 | 24.739 | 287 | 185 | 7 | 3 | 288 | 522 | 778 | 3.10e-15 | 76.6 |
| MS.gene070038.t1 | MTR_7g096060 | 25.843 | 267 | 148 | 8 | 3 | 260 | 442 | 667 | 9.77e-15 | 75.1 |
| MS.gene070038.t1 | MTR_3g104490 | 26.259 | 278 | 159 | 10 | 4 | 275 | 382 | 619 | 1.08e-14 | 75.1 |
| MS.gene070038.t1 | MTR_6g059690 | 26.255 | 259 | 157 | 8 | 3 | 260 | 399 | 624 | 3.58e-14 | 73.6 |
| MS.gene070038.t1 | MTR_5g075340 | 25.000 | 284 | 148 | 10 | 8 | 275 | 430 | 664 | 3.65e-13 | 70.5 |
| MS.gene070038.t1 | MTR_7g078570 | 26.904 | 197 | 120 | 6 | 3 | 198 | 394 | 567 | 1.51e-12 | 68.6 |
| MS.gene070038.t1 | MTR_5g075360 | 25.461 | 271 | 167 | 8 | 1 | 270 | 210 | 446 | 1.78e-11 | 65.1 |
| MS.gene070038.t1 | MTR_5g075360 | 24.908 | 273 | 166 | 8 | 1 | 270 | 386 | 622 | 1.85e-11 | 65.1 |
| MS.gene070038.t1 | MTR_5g075360 | 24.908 | 273 | 166 | 8 | 1 | 270 | 436 | 672 | 1.91e-11 | 65.1 |
| MS.gene070038.t1 | MTR_5g075360 | 25.461 | 271 | 167 | 8 | 1 | 270 | 260 | 496 | 1.95e-11 | 65.1 |
| MS.gene070038.t1 | MTR_1g044600 | 25.888 | 197 | 122 | 6 | 3 | 198 | 330 | 503 | 2.51e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070038.t1 | AT1G79560 | 77.848 | 316 | 70 | 0 | 3 | 318 | 693 | 1008 | 5.12e-179 | 521 |
| MS.gene070038.t1 | AT1G79560 | 81.250 | 288 | 54 | 0 | 3 | 290 | 693 | 980 | 5.85e-170 | 498 |
| MS.gene070038.t1 | AT1G79560 | 81.439 | 264 | 49 | 0 | 3 | 266 | 693 | 956 | 2.16e-154 | 457 |
| MS.gene070038.t1 | AT5G42270 | 41.765 | 170 | 88 | 3 | 3 | 171 | 446 | 605 | 1.14e-33 | 130 |
| MS.gene070038.t1 | AT1G50250 | 31.955 | 266 | 158 | 5 | 3 | 267 | 458 | 701 | 1.23e-33 | 130 |
| MS.gene070038.t1 | AT1G06430 | 29.964 | 277 | 164 | 7 | 4 | 278 | 417 | 665 | 9.30e-27 | 110 |
| MS.gene070038.t1 | AT1G06430 | 29.964 | 277 | 164 | 7 | 4 | 278 | 417 | 665 | 9.30e-27 | 110 |
| MS.gene070038.t1 | AT1G06430 | 29.964 | 277 | 164 | 7 | 4 | 278 | 417 | 665 | 9.30e-27 | 110 |
| MS.gene070038.t1 | AT2G30950 | 29.964 | 277 | 164 | 7 | 4 | 278 | 428 | 676 | 8.21e-26 | 108 |
| MS.gene070038.t1 | AT2G30950 | 29.964 | 277 | 164 | 7 | 4 | 278 | 424 | 672 | 9.08e-26 | 108 |
| MS.gene070038.t1 | AT2G30950 | 29.964 | 277 | 164 | 7 | 4 | 278 | 424 | 672 | 9.08e-26 | 108 |
| MS.gene070038.t1 | AT2G30950 | 29.964 | 277 | 164 | 7 | 4 | 278 | 424 | 672 | 9.08e-26 | 108 |
| MS.gene070038.t1 | AT5G15250 | 30.195 | 308 | 171 | 7 | 4 | 310 | 421 | 685 | 9.18e-26 | 108 |
| MS.gene070038.t1 | AT4G23940 | 28.824 | 170 | 99 | 6 | 10 | 171 | 641 | 796 | 5.07e-11 | 64.3 |
Find 72 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTAATAGGTTTAACTAAA+AGG | 0.201249 | 8.4:-53624590 | MS.gene070038:CDS |
| TGTGCTGAACATGTTATATT+TGG | 0.295879 | 8.4:-53624954 | MS.gene070038:CDS |
| GACCAAGGTTATACAACTTT+TGG | 0.298222 | 8.4:-53625017 | MS.gene070038:CDS |
| TCTAAATGTATTAACATCTA+TGG | 0.309987 | 8.4:+53623413 | None:intergenic |
| TTGGAGAAGTCAAGAATAAC+TGG | 0.356897 | 8.4:-53624054 | MS.gene070038:CDS |
| CATGGTTGCAAGAGAACTAT+TGG | 0.366009 | 8.4:-53624073 | MS.gene070038:CDS |
| TTCCGTACAGTTGGATTCTC+TGG | 0.372809 | 8.4:-53626571 | MS.gene070038:CDS |
| ACAAAGTCGTCAAACATTAC+TGG | 0.373664 | 8.4:+53623618 | None:intergenic |
| TGCTTGCTCACTTGTTTCCT+AGG | 0.374547 | 8.4:-53625219 | MS.gene070038:CDS |
| GTTAATAGGTTTAACTAAAA+GGG | 0.375284 | 8.4:-53624589 | MS.gene070038:CDS |
| TAAACAACTGCTTGAGGGTA+TGG | 0.381543 | 8.4:-53625421 | MS.gene070038:CDS |
| TGTTGGTTTCAGGTGAGAAA+TGG | 0.382747 | 8.4:-53625486 | MS.gene070038:intron |
| ATACATCAGTAATGTCTTGC+TGG | 0.389498 | 8.4:+53625448 | None:intergenic |
| TTTCAATCCTCGAGAAGATA+TGG | 0.396965 | 8.4:-53625042 | MS.gene070038:CDS |
| AGCATTCATCGCAAGTTCTT+CGG | 0.442751 | 8.4:+53624122 | None:intergenic |
| ACAGCTCCTGCCCGGTGGTA+AGG | 0.450190 | 8.4:-53625176 | MS.gene070038:intron |
| GTTGGTTTCAGGTGAGAAAT+GGG | 0.455354 | 8.4:-53625485 | MS.gene070038:intron |
| GTACCTCTTCGATGTCTACT+TGG | 0.455711 | 8.4:+53623586 | None:intergenic |
| AACTTGCGATGAATGCTTTG+AGG | 0.461370 | 8.4:-53624116 | MS.gene070038:CDS |
| TTACAAGGTAAGCATGCTTA+AGG | 0.465975 | 8.4:-53626952 | None:intergenic |
| AAATTTAATTTCAGATTGCT+CGG | 0.473951 | 8.4:-53624647 | MS.gene070038:intron |
| AAGTCAACATCTGAAGCATC+TGG | 0.476376 | 8.4:+53624549 | None:intergenic |
| AACTCCACTGACATCTTTGT+AGG | 0.478451 | 8.4:+53624394 | None:intergenic |
| TAACATCTATGGAGAGGAGC+CGG | 0.488494 | 8.4:+53623424 | None:intergenic |
| ACTTGCGATGAATGCTTTGA+GGG | 0.493653 | 8.4:-53624115 | MS.gene070038:CDS |
| TGGTTACTTGAAGATGCAAA+TGG | 0.502175 | 8.4:-53624997 | MS.gene070038:CDS |
| TCTGCTCATCCTCAGTGATA+AGG | 0.503458 | 8.4:+53625394 | None:intergenic |
| CAGCTTGTCTTCCGTACAGT+TGG | 0.508923 | 8.4:-53626580 | MS.gene070038:CDS |
| CTTGAAGATGCAAATGGTAG+TGG | 0.511027 | 8.4:-53624991 | MS.gene070038:CDS |
| ATAGGTTTAACTAAAAGGGT+TGG | 0.514257 | 8.4:-53624585 | MS.gene070038:CDS |
| AATTTAATTTCAGATTGCTC+GGG | 0.518034 | 8.4:-53624646 | MS.gene070038:intron |
| ATTTCAGATTGCTCGGGAGA+TGG | 0.521384 | 8.4:-53624640 | MS.gene070038:intron |
| TTAGATAAACAACTGCTTGA+GGG | 0.524070 | 8.4:-53625426 | MS.gene070038:CDS |
| AACCAAAAGTTGTATAACCT+TGG | 0.529133 | 8.4:+53625015 | None:intergenic |
| GAAGTCAAGAATAACTGGAT+TGG | 0.534570 | 8.4:-53624049 | MS.gene070038:intron |
| TCTTCGATGTCTACTTGGAA+TGG | 0.535076 | 8.4:+53623591 | None:intergenic |
| GTTCTCTTGCAACCATGTCT+AGG | 0.535805 | 8.4:+53624079 | None:intergenic |
| AGAGGAGCCGGGTATAAGTC+AGG | 0.535858 | 8.4:+53623436 | None:intergenic |
| AACATCTATGGAGAGGAGCC+GGG | 0.542673 | 8.4:+53623425 | None:intergenic |
| AGAATATTACTGATGGAGGA+AGG | 0.543687 | 8.4:-53624929 | MS.gene070038:CDS |
| ATGCAAATGGTAGTGGCTCA+TGG | 0.545641 | 8.4:-53624984 | MS.gene070038:CDS |
| ATCAAATCATACCTTACCAC+CGG | 0.549449 | 8.4:+53625165 | None:intergenic |
| AAACAACTGCTTGAGGGTAT+GGG | 0.550518 | 8.4:-53625420 | MS.gene070038:CDS |
| GGCGAGAATATTACTGATGG+AGG | 0.557105 | 8.4:-53624933 | MS.gene070038:CDS |
| ATATCATCGTTATGCGGCAA+TGG | 0.559437 | 8.4:+53623472 | None:intergenic |
| CTGCTTGCTGTACATGAAGC+CGG | 0.562864 | 8.4:-53625250 | MS.gene070038:CDS |
| ATCATACCTTACCACCGGGC+AGG | 0.567814 | 8.4:+53625170 | None:intergenic |
| TTTGGCGAGAATATTACTGA+TGG | 0.579221 | 8.4:-53624936 | MS.gene070038:CDS |
| ATTAGATAAACAACTGCTTG+AGG | 0.579642 | 8.4:-53625427 | MS.gene070038:CDS |
| TCTATACACGGGAGTTGACA+AGG | 0.582364 | 8.4:-53624363 | MS.gene070038:CDS |
| CACCAGAGAATCCAACTGTA+CGG | 0.592692 | 8.4:+53626569 | None:intergenic |
| ATCTTTGTAGGAACTACTTG+AGG | 0.593689 | 8.4:+53624406 | None:intergenic |
| GTGAGCAAGCACAATATGAC+CGG | 0.594565 | 8.4:+53625231 | None:intergenic |
| TTATTGCTGCTTCATTGACA+AGG | 0.608254 | 8.4:+53626533 | None:intergenic |
| AATGCATGCAAATCAAACCT+AGG | 0.608632 | 8.4:+53625202 | None:intergenic |
| GAATATTACTGATGGAGGAA+GGG | 0.614163 | 8.4:-53624928 | MS.gene070038:CDS |
| GTTATCTGAGCTCTATACAC+GGG | 0.624706 | 8.4:-53624374 | MS.gene070038:CDS |
| TGGTCTACCATATCTTCTCG+AGG | 0.626889 | 8.4:+53625035 | None:intergenic |
| CAATGAAGCAGCAATAATGT+CGG | 0.628744 | 8.4:-53626527 | MS.gene070038:intron |
| ATGTATTAACATCTATGGAG+AGG | 0.640510 | 8.4:+53623418 | None:intergenic |
| AGTTCCTACAAAGATGTCAG+TGG | 0.644475 | 8.4:-53624398 | MS.gene070038:CDS |
| TCGAACACCTGACTTATACC+CGG | 0.646453 | 8.4:-53623443 | MS.gene070038:CDS |
| CGAGAAGATATGGTAGACCA+AGG | 0.658711 | 8.4:-53625032 | MS.gene070038:CDS |
| TCAAATCATACCTTACCACC+GGG | 0.664118 | 8.4:+53625166 | None:intergenic |
| TAATAAGCACATCCTAGACA+TGG | 0.671938 | 8.4:-53624091 | MS.gene070038:CDS |
| TGATCTCGAAAAGATAACAA+AGG | 0.677234 | 8.4:-53624904 | MS.gene070038:intron |
| AGTTATCTGAGCTCTATACA+CGG | 0.680637 | 8.4:-53624375 | MS.gene070038:CDS |
| CTATACACGGGAGTTGACAA+GGG | 0.701918 | 8.4:-53624362 | MS.gene070038:intron |
| ATTCCAAGTAGACATCGAAG+AGG | 0.704015 | 8.4:-53623589 | MS.gene070038:intron |
| TAGTGTATATCATCGTTATG+CGG | 0.709634 | 8.4:+53623466 | None:intergenic |
| TATGGGTGTCCTTATCACTG+AGG | 0.746011 | 8.4:-53625403 | MS.gene070038:CDS |
| CAAATGGTAGTGGCTCATGG+CGG | 0.778332 | 8.4:-53624981 | MS.gene070038:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAAATAAAATAAAA+AGG | - | chr8.4:53623448-53623467 | MS.gene070038:CDS | 0.0% |
| !! | AAATAAAAATAAAATAAAAA+GGG | - | chr8.4:53623449-53623468 | MS.gene070038:CDS | 0.0% |
| !! | TATCAAATTAAATTTAATCA+TGG | - | chr8.4:53625634-53625653 | MS.gene070038:intron | 10.0% |
| !!! | AATAATTTTAAAATTACAGT+TGG | - | chr8.4:53624650-53624669 | MS.gene070038:intron | 10.0% |
| !!! | ATAATTTTAAAATTACAGTT+GGG | - | chr8.4:53624651-53624670 | MS.gene070038:intron | 10.0% |
| !! | AATTTGGTAGAATTAATATT+TGG | - | chr8.4:53623635-53623654 | MS.gene070038:CDS | 15.0% |
| !! | ATTAAGAAATAATTGAAGTA+TGG | + | chr8.4:53626166-53626185 | None:intergenic | 15.0% |
| !! | ATTTGGTAGAATTAATATTT+GGG | - | chr8.4:53623636-53623655 | MS.gene070038:CDS | 15.0% |
| !! | CAAATAAATATAAATCTCAT+GGG | + | chr8.4:53623669-53623688 | None:intergenic | 15.0% |
| !! | GAAAAAAAAGTGATATAATA+AGG | + | chr8.4:53626659-53626678 | None:intergenic | 15.0% |
| !! | TTAAATCTAGTTATGAAAAA+GGG | - | chr8.4:53626562-53626581 | MS.gene070038:CDS | 15.0% |
| !! | TTAAGAAATAATTGAAGTAT+GGG | + | chr8.4:53626165-53626184 | None:intergenic | 15.0% |
| !! | TTAATTCTTATAAATCTCTT+AGG | + | chr8.4:53623591-53623610 | None:intergenic | 15.0% |
| !! | TTATGCAAAAAATATGTTAT+TGG | + | chr8.4:53624506-53624525 | None:intergenic | 15.0% |
| !! | TTTAAATCTAGTTATGAAAA+AGG | - | chr8.4:53626561-53626580 | MS.gene070038:CDS | 15.0% |
| !! | TTTCTTAATTACATAAACAA+TGG | - | chr8.4:53626177-53626196 | MS.gene070038:intron | 15.0% |
| !!! | ACATTTTGAAATTGTTAATT+TGG | - | chr8.4:53624779-53624798 | MS.gene070038:intron | 15.0% |
| !!! | TAACAAAAAGCATTATTTTT+AGG | - | chr8.4:53624231-53624250 | MS.gene070038:intron | 15.0% |
| !!! | TTGTATGATTTGTAATATAA+AGG | + | chr8.4:53624853-53624872 | None:intergenic | 15.0% |
| !! | ACAAAATTCAAATAGAATAC+TGG | + | chr8.4:53623888-53623907 | None:intergenic | 20.0% |
| !! | ATAATTAATCAAGTACTTAG+TGG | + | chr8.4:53624209-53624228 | None:intergenic | 20.0% |
| !! | ATTAATCTTCCTTAGTAATT+AGG | + | chr8.4:53624124-53624143 | None:intergenic | 20.0% |
| !! | GCAAATAAATATAAATCTCA+TGG | + | chr8.4:53623670-53623689 | None:intergenic | 20.0% |
| !! | GTTAATAGGTTTAACTAAAA+GGG | - | chr8.4:53625773-53625792 | MS.gene070038:intron | 20.0% |
| !! | TAAGAAATAATTGAAGTATG+GGG | + | chr8.4:53626164-53626183 | None:intergenic | 20.0% |
| !! | TAGTTTAGTGTTTAACATAA+AGG | + | chr8.4:53626351-53626370 | None:intergenic | 20.0% |
| !! | TTAATCTTCCTTAGTAATTA+GGG | + | chr8.4:53624123-53624142 | None:intergenic | 20.0% |
| !!! | AAATTTAATTTCAGATTGCT+CGG | - | chr8.4:53625715-53625734 | MS.gene070038:intron | 20.0% |
| !!! | TTTAGTTTCTTATAAGTTTC+TGG | - | chr8.4:53623523-53623542 | MS.gene070038:intron | 20.0% |
| ! | AAATATAAATGGAGAGAACT+TGG | - | chr8.4:53624008-53624027 | MS.gene070038:intron | 25.0% |
| ! | AAATTGACCTTTAAGCAATT+TGG | - | chr8.4:53623619-53623638 | MS.gene070038:CDS | 25.0% |
| ! | AACATTAATCGATTACTTGT+TGG | + | chr8.4:53625607-53625626 | None:intergenic | 25.0% |
| ! | AATAAAAAGTTGGGGTTAAT+AGG | - | chr8.4:53625759-53625778 | MS.gene070038:intron | 25.0% |
| ! | AATTCTACCAAATTGCTTAA+AGG | + | chr8.4:53623629-53623648 | None:intergenic | 25.0% |
| ! | GAATGTACATTTATATAGGT+AGG | - | chr8.4:53624082-53624101 | MS.gene070038:CDS | 25.0% |
| ! | GGTTAATAGGTTTAACTAAA+AGG | - | chr8.4:53625772-53625791 | MS.gene070038:intron | 25.0% |
| ! | GTGAGAATGTACATTTATAT+AGG | - | chr8.4:53624078-53624097 | MS.gene070038:CDS | 25.0% |
| ! | TAATCTTCCTTAGTAATTAG+GGG | + | chr8.4:53624122-53624141 | None:intergenic | 25.0% |
| ! | TACAAATCATACAAAGTTGT+TGG | - | chr8.4:53624859-53624878 | MS.gene070038:intron | 25.0% |
| ! | TACCATAACAAAAAGATCAT+TGG | + | chr8.4:53624324-53624343 | None:intergenic | 25.0% |
| ! | TAGATTTAAATTTACACCTG+AGG | + | chr8.4:53626551-53626570 | None:intergenic | 25.0% |
| ! | TTGGTCATAAGTTTGATTAT+AGG | + | chr8.4:53626592-53626611 | None:intergenic | 25.0% |
| !! | AATTTAATTTCAGATTGCTC+GGG | - | chr8.4:53625716-53625735 | MS.gene070038:intron | 25.0% |
| !! | ATTTTACAATCGTGATTAGT+GGG | - | chr8.4:53625928-53625947 | MS.gene070038:intron | 25.0% |
| !! | GTATTTGATTACTGTTTTCA+TGG | - | chr8.4:53625249-53625268 | MS.gene070038:CDS | 25.0% |
| !! | TATTTTACAATCGTGATTAG+TGG | - | chr8.4:53625927-53625946 | MS.gene070038:intron | 25.0% |
| !! | TCAGTATCTTACATTCATTT+TGG | - | chr8.4:53624748-53624767 | MS.gene070038:intron | 25.0% |
| !! | TGTTGTTTGTTACTATTGTA+TGG | + | chr8.4:53623716-53623735 | None:intergenic | 25.0% |
| !! | TTCCAATGATCTTTTTGTTA+TGG | - | chr8.4:53624319-53624338 | MS.gene070038:intron | 25.0% |
| !!! | TTGTTTTGTAAGATGTTCAA+TGG | - | chr8.4:53626494-53626513 | MS.gene070038:intron | 25.0% |
| !!! | TTTGTTAGTTATTTTGACTG+TGG | - | chr8.4:53625019-53625038 | MS.gene070038:CDS | 25.0% |
| AAAGATGTGCAAATGTCTTA+AGG | + | chr8.4:53625498-53625517 | None:intergenic | 30.0% | |
| AACCAAAAGTTGTATAACCT+TGG | + | chr8.4:53625350-53625369 | None:intergenic | 30.0% | |
| AAGCATCAAACTATAACTGA+AGG | + | chr8.4:53626632-53626651 | None:intergenic | 30.0% | |
| ACAATCAATACAATGACTAG+TGG | - | chr8.4:53624148-53624167 | MS.gene070038:intron | 30.0% | |
| ACAGATTTCTGTTTCAAAGA+AGG | + | chr8.4:53625858-53625877 | None:intergenic | 30.0% | |
| AGCATCAAACTATAACTGAA+GGG | + | chr8.4:53626631-53626650 | None:intergenic | 30.0% | |
| AGCCCTCAAAATAAAAAGTT+GGG | - | chr8.4:53625750-53625769 | MS.gene070038:intron | 30.0% | |
| AGTTGGGAATTTCAATTACA+TGG | - | chr8.4:53624667-53624686 | MS.gene070038:intron | 30.0% | |
| ATAGGTTTAACTAAAAGGGT+TGG | - | chr8.4:53625777-53625796 | MS.gene070038:intron | 30.0% | |
| ATTAGATAAACAACTGCTTG+AGG | - | chr8.4:53624935-53624954 | MS.gene070038:CDS | 30.0% | |
| CATAGCTTTCATAAGAGAAA+AGG | + | chr8.4:53626685-53626704 | None:intergenic | 30.0% | |
| CATTTGTAATACACGTAAGA+TGG | - | chr8.4:53625667-53625686 | MS.gene070038:intron | 30.0% | |
| CCAACTCAAGATAAAATACA+GGG | + | chr8.4:53624410-53624429 | None:intergenic | 30.0% | |
| CTATAACTGAAGGGAAAAAT+AGG | + | chr8.4:53626622-53626641 | None:intergenic | 30.0% | |
| GACAAAACAGCAATAAAAGA+AGG | + | chr8.4:53624296-53624315 | None:intergenic | 30.0% | |
| GACAATGCATAATATATGCA+AGG | - | chr8.4:53626403-53626422 | MS.gene070038:intron | 30.0% | |
| GATAACAAAGGTAAACACTA+TGG | - | chr8.4:53625470-53625489 | MS.gene070038:CDS | 30.0% | |
| GCAAAGAATATTTACCAACA+AGG | + | chr8.4:53624358-53624377 | None:intergenic | 30.0% | |
| GTAAGGTATGATTTGATATC+TGG | - | chr8.4:53625203-53625222 | MS.gene070038:CDS | 30.0% | |
| TAGTGTATATCATCGTTATG+CGG | + | chr8.4:53626899-53626918 | None:intergenic | 30.0% | |
| TAGTTAACCCCTAATTACTA+AGG | - | chr8.4:53624112-53624131 | MS.gene070038:CDS | 30.0% | |
| TCCAACTCAAGATAAAATAC+AGG | + | chr8.4:53624411-53624430 | None:intergenic | 30.0% | |
| TCTAATATGCTCTATGCAAA+TGG | - | chr8.4:53626078-53626097 | MS.gene070038:intron | 30.0% | |
| TGATCTCGAAAAGATAACAA+AGG | - | chr8.4:53625458-53625477 | MS.gene070038:CDS | 30.0% | |
| TGTGCTGAACATGTTATATT+TGG | - | chr8.4:53625408-53625427 | MS.gene070038:CDS | 30.0% | |
| TTAGATAAACAACTGCTTGA+GGG | - | chr8.4:53624936-53624955 | MS.gene070038:CDS | 30.0% | |
| TTAGTAATTAGGGGTTAACT+AGG | + | chr8.4:53624113-53624132 | None:intergenic | 30.0% | |
| ! | ACAAATTTTCATGCATGCAA+AGG | - | chr8.4:53626123-53626142 | MS.gene070038:intron | 30.0% |
| ! | ACATTTAAAAAGTGTGTCCA+TGG | + | chr8.4:53623973-53623992 | None:intergenic | 30.0% |
| ! | AGAAATTAAGAAAGAGTGCA+AGG | + | chr8.4:53624569-53624588 | None:intergenic | 30.0% |
| ! | ATGTCTTGCTGGAATATTTT+TGG | + | chr8.4:53624906-53624925 | None:intergenic | 30.0% |
| ! | CAAATTTTCATGCATGCAAA+GGG | - | chr8.4:53626124-53626143 | MS.gene070038:intron | 30.0% |
| ! | CAGTTATAGTTTGATGCTTT+TGG | - | chr8.4:53626633-53626652 | MS.gene070038:intron | 30.0% |
| ! | GAAATTAAGAAAGAGTGCAA+GGG | + | chr8.4:53624568-53624587 | None:intergenic | 30.0% |
| ! | TCTTTTTCCTTCAAACATTC+TGG | - | chr8.4:53626838-53626857 | MS.gene070038:intron | 30.0% |
| ! | TGTTGGTAAATATTCTTTGC+TGG | - | chr8.4:53624358-53624377 | MS.gene070038:intron | 30.0% |
| ! | TTCTTCATTTGAAACCCTTT+CGG | + | chr8.4:53626474-53626493 | None:intergenic | 30.0% |
| ! | TTGGTCAAAAAAAAGTGTAC+TGG | + | chr8.4:53624487-53624506 | None:intergenic | 30.0% |
| ! | TTGTATGGATTATTCGTGTA+TGG | + | chr8.4:53623701-53623720 | None:intergenic | 30.0% |
| ! | TTTTGTAAGATGTTCAATGG+AGG | - | chr8.4:53626497-53626516 | MS.gene070038:intron | 30.0% |
| !! | CTTTTTGTTATGGTACAACA+AGG | - | chr8.4:53624329-53624348 | MS.gene070038:intron | 30.0% |
| !!! | AACCCCAACTTTTTATTTTG+AGG | + | chr8.4:53625756-53625775 | None:intergenic | 30.0% |
| !!! | ACCCCAACTTTTTATTTTGA+GGG | + | chr8.4:53625755-53625774 | None:intergenic | 30.0% |
| !!! | GATTTATTTTGCTGTGCTAT+AGG | - | chr8.4:53625069-53625088 | MS.gene070038:intron | 30.0% |
| !!! | GTAGTTTAGTGTTTTTTTGG+TGG | + | chr8.4:53626451-53626470 | None:intergenic | 30.0% |
| !!! | TTTTAACTTAGACGTTTCTC+AGG | - | chr8.4:53624588-53624607 | MS.gene070038:CDS | 30.0% |
| AAAACACTAAACTACCCGAA+AGG | - | chr8.4:53626456-53626475 | MS.gene070038:intron | 35.0% | |
| AAACACTAAACTACCCGAAA+GGG | - | chr8.4:53626457-53626476 | MS.gene070038:intron | 35.0% | |
| AAAGATGAGCATAGTTGCAA+AGG | + | chr8.4:53626823-53626842 | None:intergenic | 35.0% | |
| AACTTCTGTTCGAATTAAGC+AGG | - | chr8.4:53625281-53625300 | MS.gene070038:intron | 35.0% | |
| AATGCATGCAAATCAAACCT+AGG | + | chr8.4:53625163-53625182 | None:intergenic | 35.0% | |
| ACAAAGTCGTCAAACATTAC+TGG | + | chr8.4:53626747-53626766 | None:intergenic | 35.0% | |
| AGAACAAAGAGTGGTAAACA+CGG | + | chr8.4:53625882-53625901 | None:intergenic | 35.0% | |
| AGAATATTACTGATGGAGGA+AGG | - | chr8.4:53625433-53625452 | MS.gene070038:CDS | 35.0% | |
| AGAGTCAGGAAAAAAAGATC+AGG | + | chr8.4:53623742-53623761 | None:intergenic | 35.0% | |
| AGTTATCTGAGCTCTATACA+CGG | - | chr8.4:53625987-53626006 | MS.gene070038:intron | 35.0% | |
| ATACATCAGTAATGTCTTGC+TGG | + | chr8.4:53624917-53624936 | None:intergenic | 35.0% | |
| ATCAAATCATACCTTACCAC+CGG | + | chr8.4:53625200-53625219 | None:intergenic | 35.0% | |
| ATCTTTGTAGGAACTACTTG+AGG | + | chr8.4:53625959-53625978 | None:intergenic | 35.0% | |
| ATTTACACCTGAGGTAAAGT+AGG | + | chr8.4:53626542-53626561 | None:intergenic | 35.0% | |
| CAATGAAGCAGCAATAATGT+CGG | - | chr8.4:53623835-53623854 | MS.gene070038:intron | 35.0% | |
| CAGCCCTCAAAATAAAAAGT+TGG | - | chr8.4:53625749-53625768 | MS.gene070038:intron | 35.0% | |
| CATAGCAATACACAATGTGA+CGG | - | chr8.4:53625227-53625246 | MS.gene070038:CDS | 35.0% | |
| GAAGTCAAGAATAACTGGAT+TGG | - | chr8.4:53626313-53626332 | MS.gene070038:intron | 35.0% | |
| GAATATTACTGATGGAGGAA+GGG | - | chr8.4:53625434-53625453 | MS.gene070038:CDS | 35.0% | |
| GCCCTCAAAATAAAAAGTTG+GGG | - | chr8.4:53625751-53625770 | MS.gene070038:intron | 35.0% | |
| GCTTTCATAAGAGAAAAGGA+TGG | + | chr8.4:53626681-53626700 | None:intergenic | 35.0% | |
| GTAAGTACCAGAATGTTTGA+AGG | + | chr8.4:53626848-53626867 | None:intergenic | 35.0% | |
| TAATAAGCACATCCTAGACA+TGG | - | chr8.4:53626271-53626290 | MS.gene070038:intron | 35.0% | |
| TAGGCACACTCACAAAATAT+TGG | + | chr8.4:53623572-53623591 | None:intergenic | 35.0% | |
| TATGAAAGCTATGTTTCGAC+AGG | - | chr8.4:53626692-53626711 | MS.gene070038:intron | 35.0% | |
| TGCATAATATATGCAAGGTC+CGG | - | chr8.4:53626408-53626427 | MS.gene070038:intron | 35.0% | |
| TGGTTACTTGAAGATGCAAA+TGG | - | chr8.4:53625365-53625384 | MS.gene070038:intron | 35.0% | |
| TTGGAGAAGTCAAGAATAAC+TGG | - | chr8.4:53626308-53626327 | MS.gene070038:intron | 35.0% | |
| TTTCAATCCTCGAGAAGATA+TGG | - | chr8.4:53625320-53625339 | MS.gene070038:intron | 35.0% | |
| TTTGGCGAGAATATTACTGA+TGG | - | chr8.4:53625426-53625445 | MS.gene070038:CDS | 35.0% | |
| ! | ACTTACATTTTCACCAATGC+AGG | - | chr8.4:53626862-53626881 | MS.gene070038:intron | 35.0% |
| ! | ATACTTTTAGTCCACAGTGA+GGG | - | chr8.4:53623946-53623965 | MS.gene070038:intron | 35.0% |
| ! | CCCTGTATTTTATCTTGAGT+TGG | - | chr8.4:53624407-53624426 | MS.gene070038:CDS | 35.0% |
| ! | GAAAAGAAGTTTTTGCATGC+TGG | + | chr8.4:53624435-53624454 | None:intergenic | 35.0% |
| ! | GACCAAGGTTATACAACTTT+TGG | - | chr8.4:53625345-53625364 | MS.gene070038:intron | 35.0% |
| ! | GGGAAAAATAGGCTTTGATT+TGG | + | chr8.4:53626611-53626630 | None:intergenic | 35.0% |
| ! | TATACTTTTAGTCCACAGTG+AGG | - | chr8.4:53623945-53623964 | MS.gene070038:intron | 35.0% |
| ! | TCTTCATTTGAAACCCTTTC+GGG | + | chr8.4:53626473-53626492 | None:intergenic | 35.0% |
| ! | TTATTGCTGCTTCATTGACA+AGG | + | chr8.4:53623832-53623851 | None:intergenic | 35.0% |
| !! | CATACAAAGTTGTTGGTTTC+AGG | - | chr8.4:53624866-53624885 | MS.gene070038:intron | 35.0% |
| !!! | CGGGTAGTTTAGTGTTTTTT+TGG | + | chr8.4:53626454-53626473 | None:intergenic | 35.0% |
| !!! | GTTTAGTGTTTTTTTGGTGG+TGG | + | chr8.4:53626448-53626467 | None:intergenic | 35.0% |
| AACTCCACTGACATCTTTGT+AGG | + | chr8.4:53625971-53625990 | None:intergenic | 40.0% | |
| AACTTGCGATGAATGCTTTG+AGG | - | chr8.4:53626246-53626265 | MS.gene070038:intron | 40.0% | |
| ACTTGCGATGAATGCTTTGA+GGG | - | chr8.4:53626247-53626266 | MS.gene070038:intron | 40.0% | |
| AGCATTCATCGCAAGTTCTT+CGG | + | chr8.4:53626243-53626262 | None:intergenic | 40.0% | |
| AGTTCCTACAAAGATGTCAG+TGG | - | chr8.4:53625964-53625983 | MS.gene070038:intron | 40.0% | |
| ATATCATCGTTATGCGGCAA+TGG | + | chr8.4:53626893-53626912 | None:intergenic | 40.0% | |
| ATGCTCTATGCAAATGGTGT+TGG | - | chr8.4:53626084-53626103 | MS.gene070038:intron | 40.0% | |
| ATTCCAAGTAGACATCGAAG+AGG | - | chr8.4:53626773-53626792 | MS.gene070038:intron | 40.0% | |
| CATGGTTGCAAGAGAACTAT+TGG | - | chr8.4:53626289-53626308 | MS.gene070038:intron | 40.0% | |
| CTTGAAGATGCAAATGGTAG+TGG | - | chr8.4:53625371-53625390 | MS.gene070038:intron | 40.0% | |
| GATAAATCACAAGTTGCCAC+CGG | + | chr8.4:53625569-53625588 | None:intergenic | 40.0% | |
| GCATATTCCTACTTTACCTC+AGG | - | chr8.4:53626532-53626551 | MS.gene070038:CDS | 40.0% | |
| GTAAAATTGTAGCGCAAGCT+GGG | + | chr8.4:53625547-53625566 | None:intergenic | 40.0% | |
| GTCTCTTCAATGTACTGTCA+CGG | + | chr8.4:53626221-53626240 | None:intergenic | 40.0% | |
| GTTATCTGAGCTCTATACAC+GGG | - | chr8.4:53625988-53626007 | MS.gene070038:intron | 40.0% | |
| TAAACAACTGCTTGAGGGTA+TGG | - | chr8.4:53624941-53624960 | MS.gene070038:CDS | 40.0% | |
| TCAAATCATACCTTACCACC+GGG | + | chr8.4:53625199-53625218 | None:intergenic | 40.0% | |
| TCTTCGATGTCTACTTGGAA+TGG | + | chr8.4:53626774-53626793 | None:intergenic | 40.0% | |
| TGAGTTCACAGAACAAAGAG+TGG | + | chr8.4:53625891-53625910 | None:intergenic | 40.0% | |
| TGCAAAGGAGTTATGCAGTA+GGG | + | chr8.4:53626808-53626827 | None:intergenic | 40.0% | |
| TTGCAAAGGAGTTATGCAGT+AGG | + | chr8.4:53626809-53626828 | None:intergenic | 40.0% | |
| ! | AAACAACTGCTTGAGGGTAT+GGG | - | chr8.4:53624942-53624961 | MS.gene070038:CDS | 40.0% |
| ! | AAGTCAACATCTGAAGCATC+TGG | + | chr8.4:53625816-53625835 | None:intergenic | 40.0% |
| ! | ACATTTTCACCAATGCAGGA+CGG | - | chr8.4:53626866-53626885 | MS.gene070038:intron | 40.0% |
| ! | AGCTTGCGCTACAATTTTAC+CGG | - | chr8.4:53625547-53625566 | MS.gene070038:intron | 40.0% |
| ! | ATTAAGAAAGAGTGCAAGGG+TGG | + | chr8.4:53624565-53624584 | None:intergenic | 40.0% |
| ! | GTTGGTTTCAGGTGAGAAAT+GGG | - | chr8.4:53624877-53624896 | MS.gene070038:intron | 40.0% |
| !! | TGTTGGTTTCAGGTGAGAAA+TGG | - | chr8.4:53624876-53624895 | MS.gene070038:intron | 40.0% |
| ATTTCAGATTGCTCGGGAGA+TGG | - | chr8.4:53625722-53625741 | MS.gene070038:intron | 45.0% | |
| CACCAGAGAATCCAACTGTA+CGG | + | chr8.4:53623796-53623815 | None:intergenic | 45.0% | |
| CGAGAAGATATGGTAGACCA+AGG | - | chr8.4:53625330-53625349 | MS.gene070038:intron | 45.0% | |
| CTATACACGGGAGTTGACAA+GGG | - | chr8.4:53626000-53626019 | MS.gene070038:intron | 45.0% | |
| GAAAGCTATGTTTCGACAGG+AGG | - | chr8.4:53626695-53626714 | MS.gene070038:intron | 45.0% | |
| GAAGCAGCAATAATGTCGGT+AGG | - | chr8.4:53623839-53623858 | MS.gene070038:intron | 45.0% | |
| GCAAAGGAGTTATGCAGTAG+GGG | + | chr8.4:53626807-53626826 | None:intergenic | 45.0% | |
| GGCGAGAATATTACTGATGG+AGG | - | chr8.4:53625429-53625448 | MS.gene070038:CDS | 45.0% | |
| GGTAAAATTGTAGCGCAAGC+TGG | + | chr8.4:53625548-53625567 | None:intergenic | 45.0% | |
| GTACAACAAGGTGACCTTGT+TGG | - | chr8.4:53624341-53624360 | MS.gene070038:intron | 45.0% | |
| GTACCTCTTCGATGTCTACT+TGG | + | chr8.4:53626779-53626798 | None:intergenic | 45.0% | |
| GTGAGCAAGCACAATATGAC+CGG | + | chr8.4:53625134-53625153 | None:intergenic | 45.0% | |
| GTTCTCTTGCAACCATGTCT+AGG | + | chr8.4:53626286-53626305 | None:intergenic | 45.0% | |
| TAACATCTATGGAGAGGAGC+CGG | + | chr8.4:53626941-53626960 | None:intergenic | 45.0% | |
| TACGGAAGACAAGCTGTTCA+GGG | + | chr8.4:53623778-53623797 | None:intergenic | 45.0% | |
| TATGGGTGTCCTTATCACTG+AGG | - | chr8.4:53624959-53624978 | MS.gene070038:CDS | 45.0% | |
| TCGAACACCTGACTTATACC+CGG | - | chr8.4:53626919-53626938 | MS.gene070038:intron | 45.0% | |
| TCTATACACGGGAGTTGACA+AGG | - | chr8.4:53625999-53626018 | MS.gene070038:intron | 45.0% | |
| TCTGCTCATCCTCAGTGATA+AGG | + | chr8.4:53624971-53624990 | None:intergenic | 45.0% | |
| TGCTTGCTCACTTGTTTCCT+AGG | - | chr8.4:53625143-53625162 | MS.gene070038:intron | 45.0% | |
| TGGTCTACCATATCTTCTCG+AGG | + | chr8.4:53625330-53625349 | None:intergenic | 45.0% | |
| TTAGGGTGAGAGAGGAAGAT+GGG | + | chr8.4:53625522-53625541 | None:intergenic | 45.0% | |
| TTCCGTACAGTTGGATTCTC+TGG | - | chr8.4:53623791-53623810 | MS.gene070038:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | - | chr8.4:53626381-53626400 | MS.gene070038:intron | 45.0% |
| ! | TTGCGCTACAATTTTACCGG+TGG | - | chr8.4:53625550-53625569 | MS.gene070038:intron | 45.0% |
| !! | ATGCAAATGGTAGTGGCTCA+TGG | - | chr8.4:53625378-53625397 | MS.gene070038:CDS | 45.0% |
| !!! | TGTTTTTTTGGTGGTGGCCA+GGG | + | chr8.4:53626442-53626461 | None:intergenic | 45.0% |
| !! | AATGAAAATAAAAATATAAA+TGG | - | chr8.4:53623997-53624016 | MS.gene070038:intron | 5.0% |
| !!! | TATTTTATTTTTATTTTGAA+TGG | + | chr8.4:53623445-53623464 | None:intergenic | 5.0% |
| AACATCTATGGAGAGGAGCC+GGG | + | chr8.4:53626940-53626959 | None:intergenic | 50.0% | |
| ACGGAAGACAAGCTGTTCAG+GGG | + | chr8.4:53623777-53623796 | None:intergenic | 50.0% | |
| CAGCTTGTCTTCCGTACAGT+TGG | - | chr8.4:53623782-53623801 | MS.gene070038:intron | 50.0% | |
| CTTAGGGTGAGAGAGGAAGA+TGG | + | chr8.4:53625523-53625542 | None:intergenic | 50.0% | |
| GTACGGAAGACAAGCTGTTC+AGG | + | chr8.4:53623779-53623798 | None:intergenic | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+AGG | - | chr8.4:53626380-53626399 | MS.gene070038:intron | 50.0% | |
| TGAGCTAAGCTCACGAGGAT+GGG | + | chr8.4:53626374-53626393 | None:intergenic | 50.0% | |
| !! | CAAATGGTAGTGGCTCATGG+CGG | - | chr8.4:53625381-53625400 | MS.gene070038:CDS | 50.0% |
| !! | CTGCTTGCTGTACATGAAGC+CGG | - | chr8.4:53625112-53625131 | MS.gene070038:intron | 50.0% |
| !!! | GTGTTTTTTTGGTGGTGGCC+AGG | + | chr8.4:53626443-53626462 | None:intergenic | 50.0% |
| AAGGTCCGGTGTTCAAACCC+TGG | - | chr8.4:53626422-53626441 | MS.gene070038:intron | 55.0% | |
| AGAGGAGCCGGGTATAAGTC+AGG | + | chr8.4:53626929-53626948 | None:intergenic | 55.0% | |
| ATCATACCTTACCACCGGGC+AGG | + | chr8.4:53625195-53625214 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | + | chr8.4:53626379-53626398 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | - | chr8.4:53626376-53626395 | MS.gene070038:intron | 55.0% | |
| CTGAGCTAAGCTCACGAGGA+TGG | + | chr8.4:53626375-53626394 | None:intergenic | 55.0% | |
| CTGTTCAGGGGCAGAGAAAG+AGG | + | chr8.4:53623765-53623784 | None:intergenic | 55.0% | |
| GGCAGAGAAAGAGGAGAGTC+AGG | + | chr8.4:53623756-53623775 | None:intergenic | 55.0% | |
| GTAGCGCAAGCTGGGTCTTA+GGG | + | chr8.4:53625539-53625558 | None:intergenic | 55.0% | |
| TAGTCCACAGTGAGGGACCA+TGG | - | chr8.4:53623953-53623972 | MS.gene070038:intron | 55.0% | |
| TGTAGCGCAAGCTGGGTCTT+AGG | + | chr8.4:53625540-53625559 | None:intergenic | 55.0% | |
| ! | GCATTTTCACAGCTCCTGCC+CGG | - | chr8.4:53625178-53625197 | MS.gene070038:CDS | 55.0% |
| GCTGGGTCTTAGGGTGAGAG+AGG | + | chr8.4:53625530-53625549 | None:intergenic | 60.0% | |
| GGCAATGGTCCGTCCTGCAT+TGG | + | chr8.4:53626878-53626897 | None:intergenic | 60.0% | |
| GGTGGCCAGGGTTTGAACAC+CGG | + | chr8.4:53626430-53626449 | None:intergenic | 60.0% | |
| GTGTCCATGGTCCCTCACTG+TGG | + | chr8.4:53623960-53623979 | None:intergenic | 60.0% | |
| ! | TTTTCACAGCTCCTGCCCGG+TGG | - | chr8.4:53625181-53625200 | MS.gene070038:CDS | 60.0% |
| ACAGCTCCTGCCCGGTGGTA+AGG | - | chr8.4:53625186-53625205 | MS.gene070038:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 53623423 | 53626961 | 53623423 | ID=MS.gene070038 |
| chr8.4 | mRNA | 53623423 | 53626961 | 53623423 | ID=MS.gene070038.t1;Parent=MS.gene070038 |
| chr8.4 | exon | 53626953 | 53626961 | 53626953 | ID=MS.gene070038.t1.exon1;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53626953 | 53626961 | 53626953 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| chr8.4 | exon | 53626528 | 53626599 | 53626528 | ID=MS.gene070038.t1.exon2;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53626528 | 53626599 | 53626528 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| chr8.4 | exon | 53625377 | 53625496 | 53625377 | ID=MS.gene070038.t1.exon3;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53625377 | 53625496 | 53625377 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| chr8.4 | exon | 53625177 | 53625293 | 53625177 | ID=MS.gene070038.t1.exon4;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53625177 | 53625293 | 53625177 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| chr8.4 | exon | 53624905 | 53625081 | 53624905 | ID=MS.gene070038.t1.exon5;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53624905 | 53625081 | 53624905 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| chr8.4 | exon | 53624536 | 53624655 | 53624536 | ID=MS.gene070038.t1.exon6;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53624536 | 53624655 | 53624536 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| chr8.4 | exon | 53624363 | 53624437 | 53624363 | ID=MS.gene070038.t1.exon7;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53624363 | 53624437 | 53624363 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| chr8.4 | exon | 53624050 | 53624157 | 53624050 | ID=MS.gene070038.t1.exon8;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53624050 | 53624157 | 53624050 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| chr8.4 | exon | 53623590 | 53623670 | 53623590 | ID=MS.gene070038.t1.exon9;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53623590 | 53623670 | 53623590 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| chr8.4 | exon | 53623423 | 53623500 | 53623423 | ID=MS.gene070038.t1.exon10;Parent=MS.gene070038.t1 |
| chr8.4 | CDS | 53623423 | 53623500 | 53623423 | ID=cds.MS.gene070038.t1;Parent=MS.gene070038.t1 |
| Gene Sequence |
| Protein sequence |
