Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071753.t1 | XP_024627239.1 | 90.5 | 796 | 64 | 6 | 13 | 806 | 8 | 793 | 0.00E+00 | 1333.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071753.t1 | A0A1P8BH59 | 28.3 | 558 | 300 | 16 | 86 | 587 | 130 | 643 | 3.5e-16 | 88.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071753.t1 | G7KRQ7 | 90.5 | 796 | 64 | 6 | 13 | 806 | 8 | 793 | 0.0e+00 | 1333.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049958 | MS.gene071753 | 0.833564 | 4.96E-56 | -1.69E-46 |
| MS.gene050669 | MS.gene071753 | 0.806669 | 7.35E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene071753 | 0.85067 | 1.46E-60 | -1.69E-46 |
| MS.gene050962 | MS.gene071753 | 0.847813 | 9.12E-60 | -1.69E-46 |
| MS.gene051490 | MS.gene071753 | 0.801518 | 8.67E-49 | -1.69E-46 |
| MS.gene051541 | MS.gene071753 | 0.827654 | 1.39E-54 | -1.69E-46 |
| MS.gene051800 | MS.gene071753 | 0.832707 | 8.11E-56 | -1.69E-46 |
| MS.gene052016 | MS.gene071753 | 0.804323 | 2.28E-49 | -1.69E-46 |
| MS.gene052493 | MS.gene071753 | 0.812093 | 5.04E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene071753 | 0.846197 | 2.53E-59 | -1.69E-46 |
| MS.gene052675 | MS.gene071753 | 0.849574 | 2.96E-60 | -1.69E-46 |
| MS.gene052677 | MS.gene071753 | 0.850303 | 1.85E-60 | -1.69E-46 |
| MS.gene054479 | MS.gene071753 | 0.817618 | 3.00E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene071753 | 0.858834 | 6.28E-63 | -1.69E-46 |
| MS.gene054893 | MS.gene071753 | 0.854946 | 8.77E-62 | -1.69E-46 |
| MS.gene055226 | MS.gene071753 | 0.804308 | 2.30E-49 | -1.69E-46 |
| MS.gene055827 | MS.gene071753 | 0.818575 | 1.82E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene071753 | 0.809082 | 2.26E-50 | -1.69E-46 |
| MS.gene056480 | MS.gene071753 | 0.804456 | 2.14E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene071753 | 0.808057 | 3.73E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene071753 | 0.815159 | 1.07E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene071753 | 0.826921 | 2.08E-54 | -1.69E-46 |
| MS.gene058289 | MS.gene071753 | 0.808028 | 3.79E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene071753 | 0.852246 | 5.23E-61 | -1.69E-46 |
| MS.gene060011 | MS.gene071753 | 0.803674 | 3.12E-49 | -1.69E-46 |
| MS.gene060373 | MS.gene071753 | 0.805936 | 1.05E-49 | -1.69E-46 |
| MS.gene060413 | MS.gene071753 | 0.807891 | 4.05E-50 | -1.69E-46 |
| MS.gene060520 | MS.gene071753 | 0.828923 | 6.86E-55 | -1.69E-46 |
| MS.gene06052 | MS.gene071753 | 0.834219 | 3.40E-56 | -1.69E-46 |
| MS.gene060850 | MS.gene071753 | 0.864644 | 1.05E-64 | -1.69E-46 |
| MS.gene060851 | MS.gene071753 | 0.858488 | 7.96E-63 | -1.69E-46 |
| MS.gene060852 | MS.gene071753 | 0.854362 | 1.29E-61 | -1.69E-46 |
| MS.gene060932 | MS.gene071753 | 0.810369 | 1.19E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071753.t1 | MTR_7g090500 | 90.452 | 796 | 64 | 6 | 13 | 806 | 8 | 793 | 0.0 | 1399 |
| MS.gene071753.t1 | MTR_7g090500 | 64.607 | 356 | 111 | 5 | 263 | 610 | 597 | 945 | 2.83e-128 | 415 |
| MS.gene071753.t1 | MTR_7g090500 | 47.879 | 165 | 77 | 3 | 385 | 543 | 1137 | 1298 | 3.76e-33 | 138 |
| MS.gene071753.t1 | MTR_7g075800 | 70.251 | 279 | 49 | 4 | 149 | 421 | 415 | 665 | 1.29e-114 | 363 |
| MS.gene071753.t1 | MTR_7g075800 | 58.192 | 177 | 42 | 2 | 602 | 775 | 518 | 665 | 3.61e-42 | 164 |
| MS.gene071753.t1 | MTR_3g020820 | 40.314 | 191 | 96 | 5 | 55 | 244 | 90 | 263 | 1.19e-24 | 110 |
| MS.gene071753.t1 | MTR_3g020820 | 48.276 | 87 | 45 | 0 | 457 | 543 | 567 | 653 | 9.58e-16 | 82.0 |
| MS.gene071753.t1 | MTR_4g071030 | 50.633 | 79 | 39 | 0 | 463 | 541 | 626 | 704 | 2.02e-17 | 87.4 |
| MS.gene071753.t1 | MTR_4g071030 | 30.275 | 218 | 121 | 4 | 29 | 225 | 29 | 236 | 3.73e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071753.t1 | AT5G04020 | 33.564 | 289 | 163 | 9 | 325 | 604 | 1028 | 1296 | 2.39e-25 | 113 |
| MS.gene071753.t1 | AT5G04020 | 56.180 | 89 | 39 | 0 | 453 | 541 | 1395 | 1483 | 2.85e-23 | 107 |
| MS.gene071753.t1 | AT5G04020 | 54.255 | 94 | 41 | 1 | 450 | 541 | 844 | 937 | 6.77e-22 | 102 |
| MS.gene071753.t1 | AT5G04020 | 47.525 | 101 | 44 | 3 | 451 | 550 | 507 | 599 | 6.85e-18 | 89.7 |
| MS.gene071753.t1 | AT5G04020 | 33.564 | 289 | 163 | 9 | 325 | 604 | 1028 | 1296 | 2.39e-25 | 113 |
| MS.gene071753.t1 | AT5G04020 | 56.180 | 89 | 39 | 0 | 453 | 541 | 1395 | 1483 | 2.85e-23 | 107 |
| MS.gene071753.t1 | AT5G04020 | 54.255 | 94 | 41 | 1 | 450 | 541 | 844 | 937 | 6.77e-22 | 102 |
| MS.gene071753.t1 | AT5G04020 | 47.525 | 101 | 44 | 3 | 451 | 550 | 507 | 599 | 6.85e-18 | 89.7 |
| MS.gene071753.t1 | AT2G38800 | 39.320 | 206 | 89 | 10 | 29 | 225 | 39 | 217 | 5.45e-22 | 101 |
| MS.gene071753.t1 | AT2G38800 | 48.913 | 92 | 43 | 1 | 452 | 543 | 506 | 593 | 6.66e-20 | 95.1 |
| MS.gene071753.t1 | AT3G54570 | 31.720 | 186 | 97 | 5 | 43 | 227 | 30 | 186 | 3.10e-13 | 73.2 |
| MS.gene071753.t1 | AT3G54570 | 31.053 | 190 | 109 | 4 | 376 | 543 | 227 | 416 | 6.47e-13 | 72.0 |
Find 152 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAGTGGCCTTCATGTAAT+TGG | 0.171119 | 7.4:+18195802 | None:intergenic |
| TTTCAGATGGCTCCAGCTTT+TGG | 0.218218 | 7.4:+18193283 | None:intergenic |
| ATCTTCTAGTCATGACTCTT+TGG | 0.235373 | 7.4:+18195300 | None:intergenic |
| CAAGATGATGTCGCGTTTAA+TGG | 0.246289 | 7.4:-18193571 | MS.gene071753:CDS |
| TCAAGAATACATAGGAAAAT+TGG | 0.253677 | 7.4:-18195942 | MS.gene071753:CDS |
| TATAGCTTTGTTGTTGATTT+CGG | 0.263460 | 7.4:+18195389 | None:intergenic |
| AGAAAGGAATGACAAGAATA+TGG | 0.282531 | 7.4:-18193926 | MS.gene071753:CDS |
| CCACTTCAAGATGCTGAAAA+TGG | 0.285607 | 7.4:-18194066 | MS.gene071753:CDS |
| GTCACAAAAGTCCACGAAAA+AGG | 0.311024 | 7.4:-18195036 | MS.gene071753:CDS |
| GACTCTTTGGGACTTGTTAC+CGG | 0.321742 | 7.4:+18195313 | None:intergenic |
| TCCACCTTCGGCACTTCTTT+AGG | 0.325409 | 7.4:+18194375 | None:intergenic |
| TACAGGAAAATGTGAAAATA+AGG | 0.329040 | 7.4:-18194679 | MS.gene071753:CDS |
| GAGGAAAGGTCTTCAACTTC+AGG | 0.331667 | 7.4:+18194501 | None:intergenic |
| AACAGCCGAAGGCGAAAATA+TGG | 0.331949 | 7.4:-18193803 | MS.gene071753:CDS |
| AACAGAAGTAGTCAAGTTTC+CGG | 0.332191 | 7.4:-18193857 | MS.gene071753:CDS |
| GAAGAGAGGTCTTCAGCTTC+AGG | 0.339503 | 7.4:+18193439 | None:intergenic |
| TGGCACCATATGCTTGTCTT+TGG | 0.345821 | 7.4:+18194842 | None:intergenic |
| GGTTTGCGACACTAGGATAT+TGG | 0.346949 | 7.4:-18193836 | MS.gene071753:CDS |
| TCCGTCTTCTGTGCTTCTTT+AGG | 0.348495 | 7.4:+18193313 | None:intergenic |
| GATAATAAGCTTCCCTTTGT+TGG | 0.352376 | 7.4:-18193616 | MS.gene071753:CDS |
| ATGGCAGTGATGGGAATAAT+AGG | 0.354407 | 7.4:-18195352 | MS.gene071753:CDS |
| GTGTGGTTTCCTTCCTCTGC+TGG | 0.355186 | 7.4:+18195868 | None:intergenic |
| TATGCTTACTGCTCTCTTCA+TGG | 0.358373 | 7.4:-18195122 | MS.gene071753:CDS |
| TCTTCTAGTCATGACTCTTT+GGG | 0.359745 | 7.4:+18195301 | None:intergenic |
| ATCTGCACTGTGGACAGTTT+CGG | 0.361904 | 7.4:+18194965 | None:intergenic |
| TGTGGGAGGTCAATGTGATT+AGG | 0.361955 | 7.4:+18195191 | None:intergenic |
| TTCTGCAACGGTGGAGTCTC+AGG | 0.372685 | 7.4:-18194034 | MS.gene071753:CDS |
| TTCAGCTGCACTTTATAATC+TGG | 0.374274 | 7.4:+18193778 | None:intergenic |
| TCAAGGAGTATCAGCTGTTA+AGG | 0.374415 | 7.4:-18195153 | MS.gene071753:CDS |
| GTCAATGTGATTAGGGAAAT+GGG | 0.392679 | 7.4:+18195199 | None:intergenic |
| GGTCAATGTGATTAGGGAAA+TGG | 0.399371 | 7.4:+18195198 | None:intergenic |
| GTCACTCTTTGTCTTTGAGC+AGG | 0.403744 | 7.4:+18194120 | None:intergenic |
| GGAGTGTCATGAGGCTTAAA+AGG | 0.404951 | 7.4:+18194897 | None:intergenic |
| TTGAGGTAACTGAGAGAGAA+AGG | 0.412316 | 7.4:-18193942 | MS.gene071753:CDS |
| GTGGGAGGTCAATGTGATTA+GGG | 0.412818 | 7.4:+18195192 | None:intergenic |
| GAGAACTACTTCCCTCTTGT+GGG | 0.412942 | 7.4:+18195174 | None:intergenic |
| CAAGTGGCTTTATGCAAACT+TGG | 0.417355 | 7.4:+18195242 | None:intergenic |
| TTCTTCCTTGCTATGATTCG+AGG | 0.417434 | 7.4:+18193984 | None:intergenic |
| CAGTGAAACAGACTCGGATA+TGG | 0.431278 | 7.4:-18193521 | MS.gene071753:CDS |
| AACTTTCTCTGCTTCGAAGT+TGG | 0.435193 | 7.4:+18194233 | None:intergenic |
| TAAGCTTCCCTTTGTTGGTA+AGG | 0.436775 | 7.4:-18193611 | MS.gene071753:CDS |
| TAAGGTTCCTCTTGTCGAAA+AGG | 0.436998 | 7.4:-18194661 | MS.gene071753:CDS |
| TGAGAACTACTTCCCTCTTG+TGG | 0.437423 | 7.4:+18195173 | None:intergenic |
| TCCTCTCTTCTGATGTTTGG+CGG | 0.439556 | 7.4:+18194202 | None:intergenic |
| GCTTGATTATGCACTTCAAA+AGG | 0.440589 | 7.4:-18194160 | MS.gene071753:CDS |
| CACTTGCTCTTCCACTATCA+AGG | 0.450193 | 7.4:-18195225 | MS.gene071753:CDS |
| TCTCTTTCCTGCACTCCATA+TGG | 0.455808 | 7.4:+18193706 | None:intergenic |
| CATGCAGTATTAAGTAATAC+AGG | 0.456042 | 7.4:-18194696 | MS.gene071753:CDS |
| GTAGTACTCGTACCATGTTT+AGG | 0.456804 | 7.4:+18193736 | None:intergenic |
| GCATCTGAAGGCAATTGTCT+TGG | 0.460907 | 7.4:+18194255 | None:intergenic |
| TAGTGAAACAGAATCAGATA+TGG | 0.464737 | 7.4:-18194583 | MS.gene071753:CDS |
| TTCTGCAGCACTTCATAGTC+TGG | 0.470784 | 7.4:+18194822 | None:intergenic |
| CTTGTAGTACTGCTAGGTTT+AGG | 0.477872 | 7.4:+18194783 | None:intergenic |
| CCAGTGGCCTTCATGTAATT+GGG | 0.479643 | 7.4:+18195803 | None:intergenic |
| GTTGAAGACCTTTCCTCTGA+TGG | 0.482829 | 7.4:-18194495 | MS.gene071753:CDS |
| TCCACCGTTGCAGAAGTTTG+TGG | 0.483864 | 7.4:+18194042 | None:intergenic |
| CCTCTTGAAAAGGTTTGTAA+AGG | 0.495617 | 7.4:-18194313 | MS.gene071753:CDS |
| GAAATGGGAATCCTTGATAG+TGG | 0.499663 | 7.4:+18195214 | None:intergenic |
| TTTCTTGATGAGATCCTCAC+AGG | 0.500070 | 7.4:+18195266 | None:intergenic |
| AGAAGGTAATCCTCTTGAAA+AGG | 0.500374 | 7.4:-18194323 | MS.gene071753:CDS |
| GTGGAGGTAAAATTGAAGAA+AGG | 0.504281 | 7.4:-18194422 | MS.gene071753:CDS |
| CATAGCAAGGAAGAAATAAA+CGG | 0.505001 | 7.4:-18193976 | MS.gene071753:CDS |
| TTCTTTGTCCTTACCAACAA+AGG | 0.506662 | 7.4:+18193603 | None:intergenic |
| CATTCATTAACTGTGGATGA+TGG | 0.519258 | 7.4:+18194876 | None:intergenic |
| AATATCCTAGTGTCGCAAAC+CGG | 0.519985 | 7.4:+18193838 | None:intergenic |
| AGAGGATTACCTTCTTCAGA+TGG | 0.520545 | 7.4:+18194331 | None:intergenic |
| TCTTTGTCCTTACCAACAAA+GGG | 0.524211 | 7.4:+18193604 | None:intergenic |
| ACGGAGAACAAACCAAAAGC+TGG | 0.532130 | 7.4:-18193295 | MS.gene071753:CDS |
| GAATCCACTGATGGCAGTGA+TGG | 0.533653 | 7.4:-18195362 | MS.gene071753:CDS |
| AGGAGTTTCTGTGAAACTTG+TGG | 0.533876 | 7.4:+18193333 | None:intergenic |
| AAGTGTGGCATATGGAGTGC+AGG | 0.534610 | 7.4:-18194763 | MS.gene071753:CDS |
| ATCGACACAAAGCGCTTCAA+CGG | 0.536927 | 7.4:+18195077 | None:intergenic |
| CGACACTAGGATATTGGAGG+AGG | 0.537280 | 7.4:-18193830 | MS.gene071753:CDS |
| CATTCAAAATCTAGAAGCTA+CGG | 0.537732 | 7.4:-18193409 | MS.gene071753:CDS |
| AGTACTACTGATGTGCCATA+TGG | 0.538348 | 7.4:-18193721 | MS.gene071753:CDS |
| AGGAGATTCTGTGAAAGTTG+TGG | 0.538777 | 7.4:+18194395 | None:intergenic |
| AGTACTACAAGTGTGGCATA+TGG | 0.539018 | 7.4:-18194771 | MS.gene071753:CDS |
| GGTGGAGAGGAAGATAATGA+AGG | 0.539857 | 7.4:-18194630 | MS.gene071753:CDS |
| GAGAACAACTGATGTGGTAG+AGG | 0.543673 | 7.4:-18195831 | MS.gene071753:CDS |
| TTTGTTGGTAAGGACAAAGA+AGG | 0.544205 | 7.4:-18193601 | MS.gene071753:CDS |
| CAAGAGGGAAGTAGTTCTCA+AGG | 0.546857 | 7.4:-18195170 | MS.gene071753:CDS |
| CTCACTTTATGATCATAGTG+TGG | 0.548663 | 7.4:+18195851 | None:intergenic |
| GCTTCGAAGTTGGCATCTGA+AGG | 0.550873 | 7.4:+18194243 | None:intergenic |
| ACCACAAACTTCTGCAACGG+TGG | 0.551497 | 7.4:-18194043 | MS.gene071753:CDS |
| CACTGGTAGTTCTCATGCAA+AGG | 0.551656 | 7.4:-18195786 | MS.gene071753:CDS |
| GCAGCTGAAGAGTATTGTGC+AGG | 0.551712 | 7.4:-18193764 | MS.gene071753:CDS |
| GAAGCATCAAGTGATTGAAT+CGG | 0.553368 | 7.4:+18194006 | None:intergenic |
| TTCAACCAAAGACAAGCATA+TGG | 0.553495 | 7.4:-18194847 | MS.gene071753:CDS |
| AAAGAAGAATATAATCGAGC+TGG | 0.554083 | 7.4:-18194553 | MS.gene071753:CDS |
| AAATGATGAAAGTGCTAATG+TGG | 0.554554 | 7.4:-18193890 | MS.gene071753:CDS |
| AGGAAAGGTCTTCAACTTCA+GGG | 0.556196 | 7.4:+18194502 | None:intergenic |
| CCCAATTACATGAAGGCCAC+TGG | 0.558174 | 7.4:-18195803 | MS.gene071753:CDS |
| TGAGGAAGTGATTGAAGCAG+AGG | 0.558995 | 7.4:-18195981 | MS.gene071753:CDS |
| AGGAAGAAATAAACGGTGGA+AGG | 0.562381 | 7.4:-18193969 | MS.gene071753:CDS |
| AGTTTCCGGTTTGCGACACT+AGG | 0.563011 | 7.4:-18193843 | MS.gene071753:CDS |
| AAAGGCTCAGATTGAATCTG+AGG | 0.565367 | 7.4:-18195999 | None:intergenic |
| AAGCTGGAGCCATCTGAAGA+AGG | 0.567497 | 7.4:-18194340 | MS.gene071753:CDS |
| TCTCTTCATGGTCATCGCCA+TGG | 0.570219 | 7.4:-18195110 | MS.gene071753:CDS |
| TATGGCAGATTACAGAAAAG+AGG | 0.570805 | 7.4:-18195457 | MS.gene071753:intron |
| AGGAACAGTACAAGTGATGC+CGG | 0.573676 | 7.4:-18195332 | MS.gene071753:CDS |
| TGATGTGCCATATGGAGTGC+AGG | 0.577439 | 7.4:-18193713 | MS.gene071753:CDS |
| GTTTGTAAAGGCATTAGAGA+AGG | 0.579655 | 7.4:-18194301 | MS.gene071753:CDS |
| TTGCGACACTAGGATATTGG+AGG | 0.581788 | 7.4:-18193833 | MS.gene071753:CDS |
| TCTAGCCATCAAGAATACAT+AGG | 0.583141 | 7.4:-18195950 | MS.gene071753:CDS |
| CTATATTCTGAATCCACTGA+TGG | 0.583457 | 7.4:-18195371 | MS.gene071753:CDS |
| GGTAGTTCTCATGCAAAGGA+TGG | 0.584182 | 7.4:-18195782 | MS.gene071753:CDS |
| TCCTAAAGAAGTGCCGAAGG+TGG | 0.585607 | 7.4:-18194376 | MS.gene071753:CDS |
| TCCTAAAGAAGCACAGAAGA+CGG | 0.585847 | 7.4:-18193314 | MS.gene071753:CDS |
| ATTCCCATCACTGCCATCAG+TGG | 0.585925 | 7.4:+18195358 | None:intergenic |
| AGCGCTTTGTGTCGATGAGG+AGG | 0.587621 | 7.4:-18195070 | MS.gene071753:CDS |
| GCCACACTTGTAGTACTGCT+AGG | 0.588822 | 7.4:+18194777 | None:intergenic |
| CACATTGACCTCCCACAAGA+GGG | 0.589492 | 7.4:-18195185 | MS.gene071753:CDS |
| GAGGTACTCTTAGAAAAGAG+TGG | 0.590631 | 7.4:-18194441 | MS.gene071753:CDS |
| CTTGATAGTGGAAGAGCAAG+TGG | 0.591085 | 7.4:+18195226 | None:intergenic |
| AAAGATTGTCCAGCAGAGGA+AGG | 0.599326 | 7.4:-18195877 | MS.gene071753:CDS |
| CTTCAAAGATTGTCCAGCAG+AGG | 0.599644 | 7.4:-18195881 | MS.gene071753:CDS |
| TTGAATGATCATCAGAAGAG+AGG | 0.602237 | 7.4:+18193425 | None:intergenic |
| GATGGTCATTCAAGATCTAG+AGG | 0.603093 | 7.4:-18194477 | MS.gene071753:CDS |
| TTGAATGACCATCAGAGGAA+AGG | 0.603934 | 7.4:+18194487 | None:intergenic |
| GATGGCAGATCAAAGCAAGT+TGG | 0.604155 | 7.4:-18195014 | MS.gene071753:CDS |
| AGATCTTGAATGACCATCAG+AGG | 0.604665 | 7.4:+18194482 | None:intergenic |
| GACACAAAGCGCTTCAACGG+AGG | 0.605276 | 7.4:+18195080 | None:intergenic |
| CAATTACAGTGAAACAGACT+CGG | 0.605562 | 7.4:-18193527 | MS.gene071753:CDS |
| GGCATCACCCAATTACATGA+AGG | 0.607148 | 7.4:-18195810 | MS.gene071753:CDS |
| TGGACCACAAACTTCTGCAA+CGG | 0.609632 | 7.4:-18194046 | MS.gene071753:CDS |
| GAAACTGTCCACAGTGCAGA+TGG | 0.612121 | 7.4:-18194963 | MS.gene071753:CDS |
| AATCCACTGATGGCAGTGAT+GGG | 0.612724 | 7.4:-18195361 | MS.gene071753:CDS |
| TCACATTGACCTCCCACAAG+AGG | 0.619716 | 7.4:-18195186 | MS.gene071753:CDS |
| ATCTCCTAAAGAAGTGCCGA+AGG | 0.621678 | 7.4:-18194379 | MS.gene071753:CDS |
| AACTACTTCCCTCTTGTGGG+AGG | 0.623492 | 7.4:+18195177 | None:intergenic |
| GTACTCTTAGAAAAGAGTGA+AGG | 0.628289 | 7.4:-18193376 | MS.gene071753:CDS |
| GGAAGAAATAAACGGTGGAA+GGG | 0.636613 | 7.4:-18193968 | MS.gene071753:CDS |
| CATGCAGTATTAAGTAACAC+AGG | 0.637489 | 7.4:-18193646 | MS.gene071753:CDS |
| ACAGTGCAGATGGTAACTCT+CGG | 0.639368 | 7.4:-18194953 | MS.gene071753:CDS |
| CTGAAGAGTATTGTGCAGGA+AGG | 0.640533 | 7.4:-18193760 | MS.gene071753:CDS |
| GATGATGTCGCGTTTAATGG+AGG | 0.643268 | 7.4:-18193568 | MS.gene071753:CDS |
| ACCTAGCAGTACTACAAGTG+TGG | 0.645020 | 7.4:-18194778 | MS.gene071753:CDS |
| TGCTTCCTCGAATCATAGCA+AGG | 0.645095 | 7.4:-18193989 | MS.gene071753:CDS |
| TAAAGTGAGAACAACTGATG+TGG | 0.651914 | 7.4:-18195837 | MS.gene071753:CDS |
| GAGGAGGAAGTAACAGCCGA+AGG | 0.654162 | 7.4:-18193814 | MS.gene071753:CDS |
| ACCGCCAAACATCAGAAGAG+AGG | 0.655407 | 7.4:-18194203 | MS.gene071753:CDS |
| AGCAAGGAAGAAATAAACGG+TGG | 0.663343 | 7.4:-18193973 | MS.gene071753:CDS |
| GATTAAGCTTGAAGCCTGTG+AGG | 0.668710 | 7.4:-18195280 | MS.gene071753:CDS |
| TGAAGCGCTTTGTGTCGATG+AGG | 0.672712 | 7.4:-18195073 | MS.gene071753:CDS |
| GTGCAGGAAGGTCCTAAACA+TGG | 0.672840 | 7.4:-18193748 | MS.gene071753:CDS |
| TAGAGGCAATGAAACAGATG+AGG | 0.674024 | 7.4:-18194460 | MS.gene071753:CDS |
| TCAACGGAGGCAGATCACCA+TGG | 0.687626 | 7.4:+18195093 | None:intergenic |
| GTGGATGATGGAGTGTCATG+AGG | 0.693072 | 7.4:+18194888 | None:intergenic |
| GTACTCTTAGAAAAGAGTGG+AGG | 0.707522 | 7.4:-18194438 | MS.gene071753:CDS |
| CTTTGCATGAGAACTACCAG+TGG | 0.712891 | 7.4:+18195787 | None:intergenic |
| AGTGTCGCATTCATTAACTG+TGG | 0.722962 | 7.4:+18194869 | None:intergenic |
| GAGAGTTACCATCTGCACTG+TGG | 0.732431 | 7.4:+18194955 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCACATATATAAAATTCA+AGG | + | chr7.4:18193554-18193573 | None:intergenic | 15.0% |
| !! | ATCAGAAATATATAAAAAAG+TGG | - | chr7.4:18194546-18194565 | MS.gene071753:CDS | 15.0% |
| !! | ATCAGAGATATATAAAAAAG+TGG | - | chr7.4:18195596-18195615 | MS.gene071753:intron | 20.0% |
| ! | ATGTACTAAATTGCATATCA+CGG | - | chr7.4:18193639-18193658 | MS.gene071753:CDS | 25.0% |
| ! | GTTAAATGTGATAGTTATTG+TGG | - | chr7.4:18193768-18193787 | MS.gene071753:CDS | 25.0% |
| ! | TACAGGAAAATGTGAAAATA+AGG | - | chr7.4:18194601-18194620 | MS.gene071753:CDS | 25.0% |
| ! | TCAAGAATACATAGGAAAAT+TGG | - | chr7.4:18193338-18193357 | MS.gene071753:CDS | 25.0% |
| !! | ATTTTCCTATGTATTCTTGA+TGG | + | chr7.4:18193338-18193357 | None:intergenic | 25.0% |
| !!! | ATTTTGACTCTGTAGTTAAT+CGG | - | chr7.4:18193571-18193590 | MS.gene071753:CDS | 25.0% |
| !!! | TATAGCTTTGTTGTTGATTT+CGG | + | chr7.4:18193894-18193913 | None:intergenic | 25.0% |
| AAAGAAGAATATAATCGAGC+TGG | - | chr7.4:18194727-18194746 | MS.gene071753:CDS | 30.0% | |
| AGAAAGGAATGACAAGAATA+TGG | - | chr7.4:18195354-18195373 | MS.gene071753:CDS | 30.0% | |
| ATGTGATAGTTATTGTGGAA+TGG | - | chr7.4:18193773-18193792 | MS.gene071753:CDS | 30.0% | |
| CATAGCAAGGAAGAAATAAA+CGG | - | chr7.4:18195304-18195323 | MS.gene071753:CDS | 30.0% | |
| CATGCAGTATTAAGTAATAC+AGG | - | chr7.4:18194584-18194603 | MS.gene071753:CDS | 30.0% | |
| CATTCAAAATCTAGAAGCTA+CGG | - | chr7.4:18195871-18195890 | MS.gene071753:CDS | 30.0% | |
| TAGCTACTATTTGACAACAT+TGG | - | chr7.4:18193698-18193717 | MS.gene071753:CDS | 30.0% | |
| TAGTGAAACAGAATCAGATA+TGG | - | chr7.4:18194697-18194716 | MS.gene071753:CDS | 30.0% | |
| TGGATTTGAGTAGTTTAAGT+TGG | - | chr7.4:18193718-18193737 | MS.gene071753:CDS | 30.0% | |
| TGTACTAAATTGCATATCAC+GGG | - | chr7.4:18193640-18193659 | MS.gene071753:CDS | 30.0% | |
| ! | AGTAATAATGTTGCTGCTTA+TGG | - | chr7.4:18193805-18193824 | MS.gene071753:CDS | 30.0% |
| !! | AAATGATGAAAGTGCTAATG+TGG | - | chr7.4:18195390-18195409 | MS.gene071753:CDS | 30.0% |
| !! | AATCAAGCTTTTAACTGTCA+AGG | - | chr7.4:18193866-18193885 | MS.gene071753:CDS | 30.0% |
| !! | ATCAAGCTTTTAACTGTCAA+GGG | - | chr7.4:18193867-18193886 | MS.gene071753:CDS | 30.0% |
| !! | TTTGAGTAGTTTAAGTTGGT+AGG | - | chr7.4:18193722-18193741 | MS.gene071753:CDS | 30.0% |
| !! | TTTTGACTCTGTAGTTAATC+GGG | - | chr7.4:18193572-18193591 | MS.gene071753:CDS | 30.0% |
| AACAGAAGTAGTCAAGTTTC+CGG | - | chr7.4:18195423-18195442 | MS.gene071753:CDS | 35.0% | |
| AGAAGAGAGGAAAAAATCTG+AGG | - | chr7.4:18195090-18195109 | MS.gene071753:CDS | 35.0% | |
| AGAAGGTAATCCTCTTGAAA+AGG | - | chr7.4:18194957-18194976 | MS.gene071753:CDS | 35.0% | |
| ATAGTAGCTATATAGCGTAG+CGG | + | chr7.4:18193688-18193707 | None:intergenic | 35.0% | |
| ATCTTCTAGTCATGACTCTT+TGG | + | chr7.4:18193983-18194002 | None:intergenic | 35.0% | |
| CAATTACAGTGAAACAGACT+CGG | - | chr7.4:18195753-18195772 | MS.gene071753:intron | 35.0% | |
| CATGCAGTATTAAGTAACAC+AGG | - | chr7.4:18195634-18195653 | MS.gene071753:intron | 35.0% | |
| CATTCATTAACTGTGGATGA+TGG | + | chr7.4:18194407-18194426 | None:intergenic | 35.0% | |
| CCTCTTGAAAAGGTTTGTAA+AGG | - | chr7.4:18194967-18194986 | MS.gene071753:CDS | 35.0% | |
| CTATATTCTGAATCCACTGA+TGG | - | chr7.4:18193909-18193928 | MS.gene071753:CDS | 35.0% | |
| CTCACTTTATGATCATAGTG+TGG | + | chr7.4:18193432-18193451 | None:intergenic | 35.0% | |
| CTTGTCGAAAAGGAAAAAGA+AGG | - | chr7.4:18194629-18194648 | MS.gene071753:CDS | 35.0% | |
| GATAATAAGCTTCCCTTTGT+TGG | - | chr7.4:18195664-18195683 | MS.gene071753:intron | 35.0% | |
| GCTTGATTATGCACTTCAAA+AGG | - | chr7.4:18195120-18195139 | MS.gene071753:CDS | 35.0% | |
| GTACTCTTAGAAAAGAGTGA+AGG | - | chr7.4:18195904-18195923 | MS.gene071753:CDS | 35.0% | |
| GTCAATGTGATTAGGGAAAT+GGG | + | chr7.4:18194084-18194103 | None:intergenic | 35.0% | |
| GTGGAGGTAAAATTGAAGAA+AGG | - | chr7.4:18194858-18194877 | MS.gene071753:CDS | 35.0% | |
| TAAAGTGAGAACAACTGATG+TGG | - | chr7.4:18193443-18193462 | MS.gene071753:CDS | 35.0% | |
| TATGGCAGATTACAGAAAAG+AGG | - | chr7.4:18193823-18193842 | MS.gene071753:CDS | 35.0% | |
| TCTAGCCATCAAGAATACAT+AGG | - | chr7.4:18193330-18193349 | MS.gene071753:CDS | 35.0% | |
| TCTTCTAGTCATGACTCTTT+GGG | + | chr7.4:18193982-18194001 | None:intergenic | 35.0% | |
| TCTTTGTCCTTACCAACAAA+GGG | + | chr7.4:18195679-18195698 | None:intergenic | 35.0% | |
| TTCAACCAAAGACAAGCATA+TGG | - | chr7.4:18194433-18194452 | MS.gene071753:CDS | 35.0% | |
| TTCAGCTGCACTTTATAATC+TGG | + | chr7.4:18195505-18195524 | None:intergenic | 35.0% | |
| TTCTTTGTCCTTACCAACAA+AGG | + | chr7.4:18195680-18195699 | None:intergenic | 35.0% | |
| TTGAATGATCATCAGAAGAG+AGG | + | chr7.4:18195858-18195877 | None:intergenic | 35.0% | |
| TTTGACTCTGTAGTTAATCG+GGG | - | chr7.4:18193573-18193592 | MS.gene071753:CDS | 35.0% | |
| ! | GAAGCATCAAGTGATTGAAT+CGG | + | chr7.4:18195277-18195296 | None:intergenic | 35.0% |
| ! | TCTTTTTCCTTTTCGACAAG+AGG | + | chr7.4:18194629-18194648 | None:intergenic | 35.0% |
| ! | TTTGTTGGTAAGGACAAAGA+AGG | - | chr7.4:18195679-18195698 | MS.gene071753:intron | 35.0% |
| ! | TTTTCCTCTCTTCTGATGTT+TGG | + | chr7.4:18195084-18195103 | None:intergenic | 35.0% |
| !! | AGTTTAAGTTGGTAGGAAGA+GGG | - | chr7.4:18193729-18193748 | MS.gene071753:CDS | 35.0% |
| !! | CCTTTACAAACCTTTTCAAG+AGG | + | chr7.4:18194970-18194989 | None:intergenic | 35.0% |
| !! | GTTTGTAAAGGCATTAGAGA+AGG | - | chr7.4:18194979-18194998 | MS.gene071753:CDS | 35.0% |
| !! | TAGTTTAAGTTGGTAGGAAG+AGG | - | chr7.4:18193728-18193747 | MS.gene071753:CDS | 35.0% |
| AAAGGAAAAAGAAGGTGGAG+AGG | - | chr7.4:18194637-18194656 | MS.gene071753:CDS | 40.0% | |
| AACTTTCTCTGCTTCGAAGT+TGG | + | chr7.4:18195050-18195069 | None:intergenic | 40.0% | |
| AATATCCTAGTGTCGCAAAC+CGG | + | chr7.4:18195445-18195464 | None:intergenic | 40.0% | |
| AGAGGAAAAAATCTGAGGAG+TGG | - | chr7.4:18195095-18195114 | MS.gene071753:CDS | 40.0% | |
| AGAGGATTACCTTCTTCAGA+TGG | + | chr7.4:18194952-18194971 | None:intergenic | 40.0% | |
| AGATCTTGAATGACCATCAG+AGG | + | chr7.4:18194801-18194820 | None:intergenic | 40.0% | |
| AGCAAGGAAGAAATAAACGG+TGG | - | chr7.4:18195307-18195326 | MS.gene071753:CDS | 40.0% | |
| AGGAAAGGTCTTCAACTTCA+GGG | + | chr7.4:18194781-18194800 | None:intergenic | 40.0% | |
| AGGAAGAAATAAACGGTGGA+AGG | - | chr7.4:18195311-18195330 | MS.gene071753:CDS | 40.0% | |
| AGGAGATTCTGTGAAAGTTG+TGG | + | chr7.4:18194888-18194907 | None:intergenic | 40.0% | |
| AGGAGTTTCTGTGAAACTTG+TGG | + | chr7.4:18195950-18195969 | None:intergenic | 40.0% | |
| AGTACTACAAGTGTGGCATA+TGG | - | chr7.4:18194509-18194528 | MS.gene071753:CDS | 40.0% | |
| AGTACTACTGATGTGCCATA+TGG | - | chr7.4:18195559-18195578 | MS.gene071753:intron | 40.0% | |
| AGTGTCGCATTCATTAACTG+TGG | + | chr7.4:18194414-18194433 | None:intergenic | 40.0% | |
| CAAAAGTCCACGAAAAAGGA+TGG | - | chr7.4:18194248-18194267 | MS.gene071753:CDS | 40.0% | |
| CAAGATGATGTCGCGTTTAA+TGG | - | chr7.4:18195709-18195728 | MS.gene071753:intron | 40.0% | |
| CCACTTCAAGATGCTGAAAA+TGG | - | chr7.4:18195214-18195233 | MS.gene071753:CDS | 40.0% | |
| CTTGTAGTACTGCTAGGTTT+AGG | + | chr7.4:18194500-18194519 | None:intergenic | 40.0% | |
| GAAATGGGAATCCTTGATAG+TGG | + | chr7.4:18194069-18194088 | None:intergenic | 40.0% | |
| GATGGTCATTCAAGATCTAG+AGG | - | chr7.4:18194803-18194822 | MS.gene071753:CDS | 40.0% | |
| GGAAGAAATAAACGGTGGAA+GGG | - | chr7.4:18195312-18195331 | MS.gene071753:CDS | 40.0% | |
| GGTCAATGTGATTAGGGAAA+TGG | + | chr7.4:18194085-18194104 | None:intergenic | 40.0% | |
| GTACTCTTAGAAAAGAGTGG+AGG | - | chr7.4:18194842-18194861 | MS.gene071753:CDS | 40.0% | |
| GTAGTACTCGTACCATGTTT+AGG | + | chr7.4:18195547-18195566 | None:intergenic | 40.0% | |
| GTCACAAAAGTCCACGAAAA+AGG | - | chr7.4:18194244-18194263 | MS.gene071753:CDS | 40.0% | |
| GTCGAAAAGGAAAAAGAAGG+TGG | - | chr7.4:18194632-18194651 | MS.gene071753:CDS | 40.0% | |
| TAAGCTTCCCTTTGTTGGTA+AGG | - | chr7.4:18195669-18195688 | MS.gene071753:intron | 40.0% | |
| TAAGGTTCCTCTTGTCGAAA+AGG | - | chr7.4:18194619-18194638 | MS.gene071753:CDS | 40.0% | |
| TAGAGGCAATGAAACAGATG+AGG | - | chr7.4:18194820-18194839 | MS.gene071753:CDS | 40.0% | |
| TATGCTTACTGCTCTCTTCA+TGG | - | chr7.4:18194158-18194177 | MS.gene071753:CDS | 40.0% | |
| TCGGCAGAATGTGAAAAATG+TGG | - | chr7.4:18194346-18194365 | MS.gene071753:CDS | 40.0% | |
| TGGAGAGCAAACAAAAAAGC+TGG | - | chr7.4:18194924-18194943 | MS.gene071753:CDS | 40.0% | |
| TTGAATGACCATCAGAGGAA+AGG | + | chr7.4:18194796-18194815 | None:intergenic | 40.0% | |
| TTGAGGTAACTGAGAGAGAA+AGG | - | chr7.4:18195338-18195357 | MS.gene071753:CDS | 40.0% | |
| TTTCTTGATGAGATCCTCAC+AGG | + | chr7.4:18194017-18194036 | None:intergenic | 40.0% | |
| ! | ATGGCAGTGATGGGAATAAT+AGG | - | chr7.4:18193928-18193947 | MS.gene071753:CDS | 40.0% |
| ! | CCATTTTCAGCATCTTGAAG+TGG | + | chr7.4:18195217-18195236 | None:intergenic | 40.0% |
| ! | GAGGTACTCTTAGAAAAGAG+TGG | - | chr7.4:18194839-18194858 | MS.gene071753:CDS | 40.0% |
| ! | TCATGCAAAGGATGGTTTTC+AGG | - | chr7.4:18193506-18193525 | MS.gene071753:CDS | 40.0% |
| ! | TCCTAAAGAAGCACAGAAGA+CGG | - | chr7.4:18195966-18195985 | MS.gene071753:CDS | 40.0% |
| ! | TTCTTCCTTGCTATGATTCG+AGG | + | chr7.4:18195299-18195318 | None:intergenic | 40.0% |
| !! | CAAGTGGCTTTATGCAAACT+TGG | + | chr7.4:18194041-18194060 | None:intergenic | 40.0% |
| !! | TCAAGGAGTATCAGCTGTTA+AGG | - | chr7.4:18194127-18194146 | MS.gene071753:CDS | 40.0% |
| !! | TTTTGTTTGCTCTCCACCTT+CGG | + | chr7.4:18194920-18194939 | None:intergenic | 40.0% |
| AAAGATTGTCCAGCAGAGGA+AGG | - | chr7.4:18193403-18193422 | MS.gene071753:CDS | 45.0% | |
| AACAGCCGAAGGCGAAAATA+TGG | - | chr7.4:18195477-18195496 | MS.gene071753:intron | 45.0% | |
| AATCCACTGATGGCAGTGAT+GGG | - | chr7.4:18193919-18193938 | MS.gene071753:CDS | 45.0% | |
| ACAGTGCAGATGGTAACTCT+CGG | - | chr7.4:18194327-18194346 | MS.gene071753:CDS | 45.0% | |
| ACCAGTGGCCTTCATGTAAT+TGG | + | chr7.4:18193481-18193500 | None:intergenic | 45.0% | |
| ACCTAGCAGTACTACAAGTG+TGG | - | chr7.4:18194502-18194521 | MS.gene071753:CDS | 45.0% | |
| ACGGAGAACAAACCAAAAGC+TGG | - | chr7.4:18195985-18196004 | MS.gene071753:CDS | 45.0% | |
| AGGAACAGTACAAGTGATGC+CGG | - | chr7.4:18193948-18193967 | MS.gene071753:CDS | 45.0% | |
| ATCTGCACTGTGGACAGTTT+CGG | + | chr7.4:18194318-18194337 | None:intergenic | 45.0% | |
| CAAGAGGGAAGTAGTTCTCA+AGG | - | chr7.4:18194110-18194129 | MS.gene071753:CDS | 45.0% | |
| CACTGGTAGTTCTCATGCAA+AGG | - | chr7.4:18193494-18193513 | MS.gene071753:CDS | 45.0% | |
| CACTTGCTCTTCCACTATCA+AGG | - | chr7.4:18194055-18194074 | MS.gene071753:CDS | 45.0% | |
| CAGTGAAACAGACTCGGATA+TGG | - | chr7.4:18195759-18195778 | MS.gene071753:intron | 45.0% | |
| CCAGTGGCCTTCATGTAATT+GGG | + | chr7.4:18193480-18193499 | None:intergenic | 45.0% | |
| CTCTGTAGTTAATCGGGGAT+AGG | - | chr7.4:18193578-18193597 | MS.gene071753:CDS | 45.0% | |
| CTTCAAAGATTGTCCAGCAG+AGG | - | chr7.4:18193399-18193418 | MS.gene071753:CDS | 45.0% | |
| CTTTGCATGAGAACTACCAG+TGG | + | chr7.4:18193496-18193515 | None:intergenic | 45.0% | |
| GAGAACAACTGATGTGGTAG+AGG | - | chr7.4:18193449-18193468 | MS.gene071753:CDS | 45.0% | |
| GAGAACTACTTCCCTCTTGT+GGG | + | chr7.4:18194109-18194128 | None:intergenic | 45.0% | |
| GAGGAAAGGTCTTCAACTTC+AGG | + | chr7.4:18194782-18194801 | None:intergenic | 45.0% | |
| GATGATGTCGCGTTTAATGG+AGG | - | chr7.4:18195712-18195731 | MS.gene071753:intron | 45.0% | |
| GATGGCAGATCAAAGCAAGT+TGG | - | chr7.4:18194266-18194285 | MS.gene071753:CDS | 45.0% | |
| GATTAAGCTTGAAGCCTGTG+AGG | - | chr7.4:18194000-18194019 | MS.gene071753:CDS | 45.0% | |
| GCATCTGAAGGCAATTGTCT+TGG | + | chr7.4:18195028-18195047 | None:intergenic | 45.0% | |
| GGCATCACCCAATTACATGA+AGG | - | chr7.4:18193470-18193489 | MS.gene071753:CDS | 45.0% | |
| GGTAGTTCTCATGCAAAGGA+TGG | - | chr7.4:18193498-18193517 | MS.gene071753:CDS | 45.0% | |
| GGTGGAGAGGAAGATAATGA+AGG | - | chr7.4:18194650-18194669 | MS.gene071753:CDS | 45.0% | |
| GGTTTGCGACACTAGGATAT+TGG | - | chr7.4:18195444-18195463 | MS.gene071753:CDS | 45.0% | |
| GTCACTCTTTGTCTTTGAGC+AGG | + | chr7.4:18195163-18195182 | None:intergenic | 45.0% | |
| GTGGGAGGTCAATGTGATTA+GGG | + | chr7.4:18194091-18194110 | None:intergenic | 45.0% | |
| GTTGAAGACCTTTCCTCTGA+TGG | - | chr7.4:18194785-18194804 | MS.gene071753:CDS | 45.0% | |
| TCCGTCTTCTGTGCTTCTTT+AGG | + | chr7.4:18195970-18195989 | None:intergenic | 45.0% | |
| TCCTCTCTTCTGATGTTTGG+CGG | + | chr7.4:18195081-18195100 | None:intergenic | 45.0% | |
| TCTCTTTCCTGCACTCCATA+TGG | + | chr7.4:18194527-18194546 | None:intergenic | 45.0% | |
| TGAGAACTACTTCCCTCTTG+TGG | + | chr7.4:18194110-18194129 | None:intergenic | 45.0% | |
| TGAGGAAGTGATTGAAGCAG+AGG | - | chr7.4:18193299-18193318 | MS.gene071753:CDS | 45.0% | |
| TGCTTCCTCGAATCATAGCA+AGG | - | chr7.4:18195291-18195310 | MS.gene071753:CDS | 45.0% | |
| TGGACCACAAACTTCTGCAA+CGG | - | chr7.4:18195234-18195253 | MS.gene071753:CDS | 45.0% | |
| TGGCACCATATGCTTGTCTT+TGG | + | chr7.4:18194441-18194460 | None:intergenic | 45.0% | |
| TGTGGGAGGTCAATGTGATT+AGG | + | chr7.4:18194092-18194111 | None:intergenic | 45.0% | |
| TTCTGCAGCACTTCATAGTC+TGG | + | chr7.4:18194461-18194480 | None:intergenic | 45.0% | |
| TTGCGACACTAGGATATTGG+AGG | - | chr7.4:18195447-18195466 | MS.gene071753:CDS | 45.0% | |
| ! | AAACGGTGGAAGGGATTTTG+AGG | - | chr7.4:18195321-18195340 | MS.gene071753:CDS | 45.0% |
| ! | ATCGACACAAAGCGCTTCAA+CGG | + | chr7.4:18194206-18194225 | None:intergenic | 45.0% |
| ! | GGAGTGTCATGAGGCTTAAA+AGG | + | chr7.4:18194386-18194405 | None:intergenic | 45.0% |
| ! | TGGCTCCATATTTTCGCCTT+CGG | + | chr7.4:18195485-18195504 | None:intergenic | 45.0% |
| !! | ATCTCCTAAAGAAGTGCCGA+AGG | - | chr7.4:18194901-18194920 | MS.gene071753:CDS | 45.0% |
| !! | CTGAAGAGTATTGTGCAGGA+AGG | - | chr7.4:18195520-18195539 | MS.gene071753:intron | 45.0% |
| !! | CTTGATAGTGGAAGAGCAAG+TGG | + | chr7.4:18194057-18194076 | None:intergenic | 45.0% |
| !! | GACTCTTTGGGACTTGTTAC+CGG | + | chr7.4:18193970-18193989 | None:intergenic | 45.0% |
| !! | TGATCTGCCATCCTTTTTCG+TGG | + | chr7.4:18194258-18194277 | None:intergenic | 45.0% |
| AACTACTTCCCTCTTGTGGG+AGG | + | chr7.4:18194106-18194125 | None:intergenic | 50.0% | |
| AAGCTGGAGCCATCTGAAGA+AGG | - | chr7.4:18194940-18194959 | MS.gene071753:CDS | 50.0% | |
| AAGTGTGGCATATGGAGTGC+AGG | - | chr7.4:18194517-18194536 | MS.gene071753:CDS | 50.0% | |
| ACCACAAACTTCTGCAACGG+TGG | - | chr7.4:18195237-18195256 | MS.gene071753:CDS | 50.0% | |
| ACCGCCAAACATCAGAAGAG+AGG | - | chr7.4:18195077-18195096 | MS.gene071753:CDS | 50.0% | |
| ATTCCCATCACTGCCATCAG+TGG | + | chr7.4:18193925-18193944 | None:intergenic | 50.0% | |
| CACATTGACCTCCCACAAGA+GGG | - | chr7.4:18194095-18194114 | MS.gene071753:CDS | 50.0% | |
| CCCAATTACATGAAGGCCAC+TGG | - | chr7.4:18193477-18193496 | MS.gene071753:CDS | 50.0% | |
| CGACACTAGGATATTGGAGG+AGG | - | chr7.4:18195450-18195469 | MS.gene071753:CDS | 50.0% | |
| GAAACTGTCCACAGTGCAGA+TGG | - | chr7.4:18194317-18194336 | MS.gene071753:CDS | 50.0% | |
| GAAGAGAGGTCTTCAGCTTC+AGG | + | chr7.4:18195844-18195863 | None:intergenic | 50.0% | |
| GAATCCACTGATGGCAGTGA+TGG | - | chr7.4:18193918-18193937 | MS.gene071753:CDS | 50.0% | |
| GAGAGTTACCATCTGCACTG+TGG | + | chr7.4:18194328-18194347 | None:intergenic | 50.0% | |
| GCCACACTTGTAGTACTGCT+AGG | + | chr7.4:18194506-18194525 | None:intergenic | 50.0% | |
| GCTTCGAAGTTGGCATCTGA+AGG | + | chr7.4:18195040-18195059 | None:intergenic | 50.0% | |
| GTGCAGGAAGGTCCTAAACA+TGG | - | chr7.4:18195532-18195551 | MS.gene071753:intron | 50.0% | |
| TCACATTGACCTCCCACAAG+AGG | - | chr7.4:18194094-18194113 | MS.gene071753:CDS | 50.0% | |
| TCCACCGTTGCAGAAGTTTG+TGG | + | chr7.4:18195241-18195260 | None:intergenic | 50.0% | |
| TCCACCTTCGGCACTTCTTT+AGG | + | chr7.4:18194908-18194927 | None:intergenic | 50.0% | |
| TCTCTTCATGGTCATCGCCA+TGG | - | chr7.4:18194170-18194189 | MS.gene071753:CDS | 50.0% | |
| TGATGTGCCATATGGAGTGC+AGG | - | chr7.4:18195567-18195586 | MS.gene071753:intron | 50.0% | |
| ! | AGTTTCCGGTTTGCGACACT+AGG | - | chr7.4:18195437-18195456 | MS.gene071753:CDS | 50.0% |
| ! | TGAAGCGCTTTGTGTCGATG+AGG | - | chr7.4:18194207-18194226 | MS.gene071753:CDS | 50.0% |
| !! | GCAGCTGAAGAGTATTGTGC+AGG | - | chr7.4:18195516-18195535 | MS.gene071753:intron | 50.0% |
| !! | GTGGATGATGGAGTGTCATG+AGG | + | chr7.4:18194395-18194414 | None:intergenic | 50.0% |
| !! | TCCTAAAGAAGTGCCGAAGG+TGG | - | chr7.4:18194904-18194923 | MS.gene071753:CDS | 50.0% |
| GAGGAGGAAGTAACAGCCGA+AGG | - | chr7.4:18195466-18195485 | MS.gene071753:intron | 55.0% | |
| GTGTGGTTTCCTTCCTCTGC+TGG | + | chr7.4:18193415-18193434 | None:intergenic | 55.0% | |
| TCAACGGAGGCAGATCACCA+TGG | + | chr7.4:18194190-18194209 | None:intergenic | 55.0% | |
| TTCTGCAACGGTGGAGTCTC+AGG | - | chr7.4:18195246-18195265 | MS.gene071753:CDS | 55.0% | |
| ! | AGCGCTTTGTGTCGATGAGG+AGG | - | chr7.4:18194210-18194229 | MS.gene071753:CDS | 55.0% |
| ! | GACACAAAGCGCTTCAACGG+AGG | + | chr7.4:18194203-18194222 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 18193285 | 18196017 | 18193285 | ID=MS.gene071753 |
| chr7.4 | mRNA | 18193285 | 18196017 | 18193285 | ID=MS.gene071753.t1;Parent=MS.gene071753 |
| chr7.4 | exon | 18195775 | 18196017 | 18195775 | ID=MS.gene071753.t1.exon1;Parent=MS.gene071753.t1 |
| chr7.4 | CDS | 18195775 | 18196017 | 18195775 | ID=cds.MS.gene071753.t1;Parent=MS.gene071753.t1 |
| chr7.4 | exon | 18193285 | 18195471 | 18193285 | ID=MS.gene071753.t1.exon2;Parent=MS.gene071753.t1 |
| chr7.4 | CDS | 18193285 | 18195471 | 18193285 | ID=cds.MS.gene071753.t1;Parent=MS.gene071753.t1 |
| Gene Sequence |
| Protein sequence |
