Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08768.t1 | XP_003629721.2 | 92.2 | 485 | 38 | 0 | 1 | 485 | 25 | 509 | 7.50E-277 | 962.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08768.t1 | Q8W496 | 62.0 | 411 | 125 | 5 | 49 | 428 | 73 | 483 | 2.7e-166 | 586.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08768.t1 | G7LIM2 | 92.2 | 485 | 38 | 0 | 1 | 485 | 1 | 485 | 5.4e-277 | 962.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene08768 | 0.852706 | 3.87E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene08768 | 0.814986 | 1.16E-51 | -1.69E-46 |
| MS.gene049907 | MS.gene08768 | 0.836293 | 1.02E-56 | -1.69E-46 |
| MS.gene050122 | MS.gene08768 | 0.806266 | 8.94E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene08768 | 0.836216 | 1.07E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene08768 | 0.832799 | 7.69E-56 | -1.69E-46 |
| MS.gene050520 | MS.gene08768 | 0.820098 | 8.21E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene08768 | 0.817622 | 3.00E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene08768 | 0.812697 | 3.72E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene08768 | 0.812104 | 5.02E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene08768 | 0.826925 | 2.08E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene08768 | 0.830756 | 2.45E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene08768 | 0.800711 | 1.27E-48 | -1.69E-46 |
| MS.gene052340 | MS.gene08768 | 0.811221 | 7.80E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene08768 | 0.803315 | 3.70E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene08768 | 0.837229 | 5.88E-57 | -1.69E-46 |
| MS.gene05316 | MS.gene08768 | 0.853578 | 2.18E-61 | -1.69E-46 |
| MS.gene053813 | MS.gene08768 | 0.811879 | 5.61E-51 | -1.69E-46 |
| MS.gene054010 | MS.gene08768 | 0.825001 | 5.95E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene08768 | 0.826195 | 3.10E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene08768 | 0.820639 | 6.17E-53 | -1.69E-46 |
| MS.gene054013 | MS.gene08768 | 0.824473 | 7.92E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene08768 | 0.812216 | 4.74E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene08768 | 0.838924 | 2.15E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene08768 | 0.811914 | 5.52E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene08768 | 0.845933 | 2.98E-59 | -1.69E-46 |
| MS.gene055666 | MS.gene08768 | 0.818996 | 1.46E-52 | -1.69E-46 |
| MS.gene055911 | MS.gene08768 | 0.811586 | 6.50E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene08768 | 0.813896 | 2.03E-51 | -1.69E-46 |
| MS.gene056422 | MS.gene08768 | 0.811175 | 7.99E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene08768 | 0.85348 | 2.32E-61 | -1.69E-46 |
| MS.gene057448 | MS.gene08768 | 0.814565 | 1.44E-51 | -1.69E-46 |
| MS.gene057449 | MS.gene08768 | 0.814682 | 1.36E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene08768 | 0.816688 | 4.86E-52 | -1.69E-46 |
| MS.gene057469 | MS.gene08768 | 0.815373 | 9.56E-52 | -1.69E-46 |
| MS.gene057537 | MS.gene08768 | 0.819925 | 8.99E-53 | -1.69E-46 |
| MS.gene058075 | MS.gene08768 | 0.81306 | 3.10E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene08768 | 0.800032 | 1.74E-48 | -1.69E-46 |
| MS.gene058365 | MS.gene08768 | 0.815878 | 7.38E-52 | -1.69E-46 |
| MS.gene058700 | MS.gene08768 | 0.811179 | 7.97E-51 | -1.69E-46 |
| MS.gene058948 | MS.gene08768 | 0.839721 | 1.34E-57 | -1.69E-46 |
| MS.gene058949 | MS.gene08768 | 0.847093 | 1.44E-59 | -1.69E-46 |
| MS.gene05907 | MS.gene08768 | 0.806962 | 6.38E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene08768 | 0.808155 | 3.56E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene08768 | 0.805438 | 1.34E-49 | -1.69E-46 |
| MS.gene059674 | MS.gene08768 | 0.811627 | 6.37E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene08768 | 0.808519 | 2.98E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene08768 | 0.82803 | 1.13E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene08768 | 0.827633 | 1.40E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene08768 | 0.831339 | 1.77E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene08768 | 0.84142 | 4.80E-58 | -1.69E-46 |
| MS.gene059807 | MS.gene08768 | 0.840302 | 9.43E-58 | -1.69E-46 |
| MS.gene059974 | MS.gene08768 | 0.82937 | 5.35E-55 | -1.69E-46 |
| MS.gene060372 | MS.gene08768 | 0.819677 | 1.02E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene08768 | 0.829982 | 3.79E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene08768 | -0.823615 | 1.26E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene08768 | 0.818828 | 1.60E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08768.t1 | MTR_8g085790 | 92.165 | 485 | 38 | 0 | 1 | 485 | 1 | 485 | 0.0 | 941 |
| MS.gene08768.t1 | MTR_8g085840 | 88.706 | 487 | 52 | 2 | 1 | 485 | 25 | 510 | 0.0 | 910 |
| MS.gene08768.t1 | MTR_8g085820 | 87.064 | 487 | 60 | 2 | 1 | 485 | 1 | 486 | 0.0 | 892 |
| MS.gene08768.t1 | MTR_8g085790 | 91.597 | 357 | 30 | 0 | 1 | 357 | 25 | 381 | 0.0 | 695 |
| MS.gene08768.t1 | MTR_4g057200 | 37.819 | 431 | 220 | 16 | 54 | 455 | 89 | 500 | 2.91e-82 | 266 |
| MS.gene08768.t1 | MTR_3g105820 | 27.506 | 429 | 260 | 11 | 43 | 440 | 84 | 492 | 2.62e-45 | 167 |
| MS.gene08768.t1 | MTR_8g085810 | 60.811 | 74 | 26 | 1 | 362 | 435 | 1 | 71 | 1.09e-23 | 95.5 |
| MS.gene08768.t1 | MTR_3g103500 | 84.783 | 46 | 7 | 0 | 477 | 522 | 41 | 86 | 3.61e-15 | 78.6 |
| MS.gene08768.t1 | MTR_3g103500 | 84.783 | 46 | 7 | 0 | 477 | 522 | 41 | 86 | 4.23e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08768.t1 | AT4G25650 | 63.111 | 450 | 156 | 4 | 45 | 484 | 67 | 516 | 0.0 | 619 |
| MS.gene08768.t1 | AT4G25650 | 60.465 | 473 | 154 | 6 | 45 | 484 | 67 | 539 | 0.0 | 610 |
| MS.gene08768.t1 | AT3G44880 | 34.646 | 508 | 271 | 18 | 19 | 487 | 39 | 524 | 6.09e-83 | 268 |
| MS.gene08768.t1 | AT2G24820 | 27.815 | 453 | 267 | 12 | 25 | 440 | 50 | 479 | 4.20e-47 | 172 |
| MS.gene08768.t1 | AT1G44446 | 21.680 | 369 | 213 | 16 | 61 | 406 | 119 | 434 | 3.70e-12 | 68.9 |
| MS.gene08768.t1 | AT1G44446 | 22.222 | 369 | 211 | 17 | 61 | 406 | 221 | 536 | 5.09e-12 | 68.9 |
Find 132 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCAGCTCTATGAGCTTTA+AGG | 0.164902 | 4.2:-12705605 | None:intergenic |
| TCTGAACTTGTTTCATCTTC+AGG | 0.212251 | 4.2:-12701721 | None:intergenic |
| TCCATCATTTGCTAGCTTAA+TGG | 0.218538 | 4.2:+12702477 | MS.gene08768:CDS |
| TTGAATCGAGGATCAGTATT+TGG | 0.226374 | 4.2:-12702406 | None:intergenic |
| CCATCATTTGCTAGCTTAAT+GGG | 0.262213 | 4.2:+12702478 | MS.gene08768:CDS |
| CAAATTGCTCCTGCATTGTT+TGG | 0.262621 | 4.2:+12705639 | MS.gene08768:CDS |
| AGAATAATATCTTGTGGTTT+TGG | 0.262792 | 4.2:+12702383 | MS.gene08768:CDS |
| CACTACATTGAGGCTCTTAT+AGG | 0.275331 | 4.2:-12704515 | None:intergenic |
| ATCATATCAGTTGCTTCAAT+TGG | 0.287082 | 4.2:+12704553 | MS.gene08768:CDS |
| AATGATGGATCATCAATTTC+TGG | 0.296431 | 4.2:-12702463 | None:intergenic |
| TGGATGCTGGTCAAGAAAAT+TGG | 0.301039 | 4.2:+12703818 | MS.gene08768:CDS |
| TCAATCCTTCCTTCAGATAA+AGG | 0.315750 | 4.2:-12701910 | None:intergenic |
| CAATGGTTTCACTGCAAATC+AGG | 0.316257 | 4.2:+12703219 | MS.gene08768:CDS |
| CTACTACTGGAATCTGTTAA+TGG | 0.328223 | 4.2:-12701676 | None:intergenic |
| GGAAACAGAGATATTCCTTA+TGG | 0.335690 | 4.2:+12702499 | MS.gene08768:CDS |
| TGGGAATTGATGTTGTTATA+TGG | 0.344667 | 4.2:+12701827 | MS.gene08768:CDS |
| GAAGTGTTCCCACGGATTAA+TGG | 0.348211 | 4.2:-12701619 | None:intergenic |
| ACAGAAGATGCAAGTTCATC+TGG | 0.362015 | 4.2:-12703295 | None:intergenic |
| ACCTCCTAGAGAACAGCTTA+TGG | 0.373079 | 4.2:+12703966 | MS.gene08768:CDS |
| CACGTGAAGGTTACTACTAC+TGG | 0.379514 | 4.2:-12701689 | None:intergenic |
| ACAAGAGCATCTGCCTTTGT+TGG | 0.398543 | 4.2:-12703859 | None:intergenic |
| AAGGCAGATGCTCTTGTGAT+TGG | 0.399532 | 4.2:+12703865 | MS.gene08768:CDS |
| AAATGGTTAAAGAAGTATTC+AGG | 0.400085 | 4.2:+12703895 | MS.gene08768:CDS |
| TGCATCTTCTGTTGAAACTA+AGG | 0.404424 | 4.2:+12703306 | MS.gene08768:CDS |
| TGCCTTTGTTGGCATAAAAC+AGG | 0.404897 | 4.2:-12703848 | None:intergenic |
| GTTAATCCATAGTGTGCATA+TGG | 0.414358 | 4.2:-12703032 | None:intergenic |
| TGAAGGAAGGATTGATCAAT+GGG | 0.415631 | 4.2:+12701918 | MS.gene08768:CDS |
| CCCATTAAGCTAGCAAATGA+TGG | 0.416361 | 4.2:-12702478 | None:intergenic |
| ATATTATTCTGCACAATGCT+TGG | 0.417838 | 4.2:-12702370 | None:intergenic |
| ATTGAATGGTTAGATATCAA+TGG | 0.420963 | 4.2:+12703202 | MS.gene08768:CDS |
| CACTTGATTTCTCAATTGAA+TGG | 0.423797 | 4.2:+12703188 | MS.gene08768:CDS |
| TATAACTTAACAGTGAATAA+TGG | 0.429845 | 4.2:+12703145 | MS.gene08768:intron |
| CATCAATTTCTGGTATGAAT+GGG | 0.432152 | 4.2:-12702453 | None:intergenic |
| TCATCAATTTCTGGTATGAA+TGG | 0.435029 | 4.2:-12702454 | None:intergenic |
| CTGGTAATAGTAGACTGATT+TGG | 0.436210 | 4.2:+12703457 | MS.gene08768:CDS |
| AAGAAATTCTATAGTTGTGC+TGG | 0.439574 | 4.2:+12704618 | MS.gene08768:CDS |
| ATTCAGGTGATCAAGTTGAT+TGG | 0.449333 | 4.2:+12703911 | MS.gene08768:CDS |
| ACCCACAGTCCAAAGTTTCT+CGG | 0.449692 | 4.2:-12703486 | None:intergenic |
| CATGTTCCATATGCACACTA+TGG | 0.450961 | 4.2:+12703026 | MS.gene08768:CDS |
| ATTTGTATTCCTGTGAGTCC+TGG | 0.453411 | 4.2:+12703438 | MS.gene08768:CDS |
| CAATATGTGATCTTGACAAA+AGG | 0.457440 | 4.2:+12701782 | MS.gene08768:CDS |
| CTTAAAGCTCATAGAGCTGC+TGG | 0.464353 | 4.2:+12705606 | MS.gene08768:CDS |
| TGATTGCAAGTTCATTCCTC+AGG | 0.468109 | 4.2:+12701987 | MS.gene08768:CDS |
| TCCGAGAAACTTTGGACTGT+GGG | 0.472374 | 4.2:+12703485 | MS.gene08768:CDS |
| TCATATCAGTTGCTTCAATT+GGG | 0.473164 | 4.2:+12704554 | MS.gene08768:CDS |
| TAATGCAGAAATCATCCGTT+CGG | 0.475564 | 4.2:+12703394 | MS.gene08768:intron |
| CTGAAGGAAGGATTGATCAA+TGG | 0.475748 | 4.2:+12701917 | MS.gene08768:CDS |
| TCTTCAAGAGACAAAGGAAA+AGG | 0.476352 | 4.2:+12705549 | MS.gene08768:intron |
| GAAACAGAGATATTCCTTAT+GGG | 0.476962 | 4.2:+12702500 | MS.gene08768:CDS |
| TGGTGCTTTCCGAGAAACTT+TGG | 0.477796 | 4.2:+12703477 | MS.gene08768:CDS |
| CTCTAGGAGGTGTAGGAGGA+AGG | 0.487449 | 4.2:-12703954 | None:intergenic |
| AATAATGGTGATAGAGAAGG+AGG | 0.493895 | 4.2:+12703160 | MS.gene08768:CDS |
| GATTGGAGAGGAAAATATAG+TGG | 0.496907 | 4.2:+12703928 | MS.gene08768:CDS |
| GATTGTTGCTGCAATGAAGC+AGG | 0.501617 | 4.2:+12704576 | MS.gene08768:CDS |
| GGCGCCTCGTGAAGGACCTC+CGG | 0.509628 | 4.2:+12702008 | MS.gene08768:CDS |
| GTGAATAATGGTGATAGAGA+AGG | 0.510568 | 4.2:+12703157 | MS.gene08768:intron |
| ATTCCTCAGGCGCCTCGTGA+AGG | 0.513428 | 4.2:+12702000 | MS.gene08768:CDS |
| AAATTAAAATCATACCCATA+AGG | 0.517619 | 4.2:-12702514 | None:intergenic |
| GATAAAGGTGCTAATCTATG+AGG | 0.517916 | 4.2:-12701895 | None:intergenic |
| TATAAATAAAAGATGCTTGG+TGG | 0.517953 | 4.2:-12703265 | None:intergenic |
| CTATATAAATAAAAGATGCT+TGG | 0.518931 | 4.2:-12703268 | None:intergenic |
| AACTCTTGCAATTCACCGTA+TGG | 0.523296 | 4.2:-12704483 | None:intergenic |
| AATATGTGATCTTGACAAAA+GGG | 0.523473 | 4.2:+12701783 | MS.gene08768:CDS |
| AGATCACATATTGGCATCAA+AGG | 0.530584 | 4.2:-12701772 | None:intergenic |
| GTTTCACTGCAAATCAGGGT+TGG | 0.531039 | 4.2:+12703224 | MS.gene08768:CDS |
| TTTATATCTTCTCCATGTTG+AGG | 0.531042 | 4.2:+12703569 | MS.gene08768:CDS |
| AATGGTTTCACTGCAAATCA+GGG | 0.531344 | 4.2:+12703220 | MS.gene08768:CDS |
| TTAGTTATCGACGGTGGTGT+TGG | 0.532054 | 4.2:+12705663 | MS.gene08768:CDS |
| ACCGCGATGGATTCTTCATG+TGG | 0.533829 | 4.2:+12703521 | MS.gene08768:CDS |
| CTGTCCATAAGCTGTTCTCT+AGG | 0.535255 | 4.2:-12703970 | None:intergenic |
| CTGGAATCTGTTAATGGAGA+AGG | 0.535723 | 4.2:-12701670 | None:intergenic |
| TTGTTTGGTTTAGTTATCGA+CGG | 0.536069 | 4.2:+12705654 | MS.gene08768:CDS |
| TTCCGAGAAACTTTGGACTG+TGG | 0.536212 | 4.2:+12703484 | MS.gene08768:CDS |
| TAGCACCTTTATCTGAAGGA+AGG | 0.536409 | 4.2:+12701905 | MS.gene08768:CDS |
| TGGTCAAGAAAATTGGCATA+AGG | 0.536911 | 4.2:+12703825 | MS.gene08768:CDS |
| CCCATCACTTTCTTAGCATG+AGG | 0.538954 | 4.2:-12701808 | None:intergenic |
| AGATTAGCACCTTTATCTGA+AGG | 0.544881 | 4.2:+12701901 | MS.gene08768:CDS |
| CAAATCAGTCTACTATTACC+AGG | 0.545513 | 4.2:-12703456 | None:intergenic |
| GTTATCGACGGTGGTGTTGG+TGG | 0.546040 | 4.2:+12705666 | MS.gene08768:CDS |
| AGGTTACAGTGTGTGTATCA+TGG | 0.551337 | 4.2:+12701943 | MS.gene08768:CDS |
| CTACTATTACCAGGACTCAC+AGG | 0.551379 | 4.2:-12703447 | None:intergenic |
| CATAGAAAATTTCTTCCGAA+CGG | 0.556398 | 4.2:-12703409 | None:intergenic |
| GGATTAACTCCAGACCCAAA+AGG | 0.558427 | 4.2:+12703047 | MS.gene08768:CDS |
| CTAGAGAACAGCTTATGGAC+AGG | 0.559328 | 4.2:+12703971 | MS.gene08768:CDS |
| ATCAATTTCTGGTATGAATG+GGG | 0.563979 | 4.2:-12702452 | None:intergenic |
| GATTCAAAGATATTATTACA+AGG | 0.564688 | 4.2:+12702422 | MS.gene08768:CDS |
| ACCTCATGCTAAGAAAGTGA+TGG | 0.565040 | 4.2:+12701807 | MS.gene08768:CDS |
| TACAGTGTGTGTATCATGGT+TGG | 0.568463 | 4.2:+12701947 | MS.gene08768:CDS |
| GGTCCTTCACGAGGCGCCTG+AGG | 0.572014 | 4.2:-12702003 | None:intergenic |
| GAAGGATTGATCAATGGGGT+AGG | 0.572052 | 4.2:+12701923 | MS.gene08768:CDS |
| AAAACGCTAAACAACTCACA+TGG | 0.573149 | 4.2:+12705574 | MS.gene08768:CDS |
| TGTTCTCTAGGAGGTGTAGG+AGG | 0.574266 | 4.2:-12703958 | None:intergenic |
| AATTCTTCTTCAAGAGACAA+AGG | 0.578590 | 4.2:+12705543 | MS.gene08768:intron |
| CAAGTTCAGAGAAATTTGAC+TGG | 0.578841 | 4.2:+12701734 | MS.gene08768:CDS |
| AGCTGTTCTCTAGGAGGTGT+AGG | 0.578889 | 4.2:-12703961 | None:intergenic |
| TACTTTCATTCGCATTGTCG+CGG | 0.580974 | 4.2:+12704644 | MS.gene08768:CDS |
| CCTCATGCTAAGAAAGTGAT+GGG | 0.581206 | 4.2:+12701808 | MS.gene08768:CDS |
| CAACACTTCCATTAATCCGT+GGG | 0.582136 | 4.2:+12701611 | MS.gene08768:CDS |
| AATTGATGTTGTTATATGGT+GGG | 0.583888 | 4.2:+12701831 | MS.gene08768:CDS |
| TGCTGCAATGAAGCAGGGAA+TGG | 0.586407 | 4.2:+12704582 | MS.gene08768:CDS |
| GAATTGATGTTGTTATATGG+TGG | 0.587435 | 4.2:+12701830 | MS.gene08768:CDS |
| TCTAGGAGGTGTAGGAGGAA+GGG | 0.587980 | 4.2:-12703953 | None:intergenic |
| TCAACACTTCCATTAATCCG+TGG | 0.590723 | 4.2:+12701610 | MS.gene08768:CDS |
| GTAATAATATCTTTGAATCG+AGG | 0.598480 | 4.2:-12702418 | None:intergenic |
| TCGACAAAATTGTACCGCGA+TGG | 0.598932 | 4.2:+12703508 | MS.gene08768:CDS |
| TCCATAAGCTGTTCTCTAGG+AGG | 0.599001 | 4.2:-12703967 | None:intergenic |
| CTATAAGAGCCTCAATGTAG+TGG | 0.601895 | 4.2:+12704516 | MS.gene08768:CDS |
| CAGGTTCATCATCCACGTGA+AGG | 0.603801 | 4.2:-12701702 | None:intergenic |
| TTGTGCAGAATAATATCTTG+TGG | 0.604851 | 4.2:+12702377 | MS.gene08768:CDS |
| GGTACTGATTGAAAACCTCA+TGG | 0.605597 | 4.2:+12702995 | MS.gene08768:CDS |
| ATAACTAAACCAAACAATGC+AGG | 0.606605 | 4.2:-12705648 | None:intergenic |
| CATTCAATTGAGAAATCAAG+TGG | 0.610212 | 4.2:-12703187 | None:intergenic |
| GGTGATCAAGTTGATTGGAG+AGG | 0.612421 | 4.2:+12703916 | MS.gene08768:CDS |
| GGGATAGAAATGAGAATGCA+TGG | 0.630522 | 4.2:+12701851 | MS.gene08768:CDS |
| TGTGCATATGGAACATGTGA+AGG | 0.634120 | 4.2:-12703020 | None:intergenic |
| CAGTAGTAGTAACCTTCACG+TGG | 0.639581 | 4.2:+12701690 | MS.gene08768:CDS |
| GAACAGGTACTGGAGCCATA+CGG | 0.641416 | 4.2:+12704468 | MS.gene08768:intron |
| TAAAAGGAATTACCTCAACA+TGG | 0.650469 | 4.2:-12703581 | None:intergenic |
| TCAATTTCTGGTATGAATGG+GGG | 0.651927 | 4.2:-12702451 | None:intergenic |
| TTTGGTTTAGTTATCGACGG+TGG | 0.654964 | 4.2:+12705657 | MS.gene08768:CDS |
| GCATCACTTCCACTACATTG+AGG | 0.655047 | 4.2:-12704525 | None:intergenic |
| AACATGCAATTTCAGGTACG+AGG | 0.660550 | 4.2:+12702974 | MS.gene08768:intron |
| GTGCATATGGAACATGTGAA+GGG | 0.665250 | 4.2:-12703019 | None:intergenic |
| TGTTAATGGAGAAGGTGACA+AGG | 0.682450 | 4.2:-12701662 | None:intergenic |
| ATTGTTGCTGCAATGAAGCA+GGG | 0.683050 | 4.2:+12704577 | MS.gene08768:CDS |
| AAACGCTAAACAACTCACAT+GGG | 0.684108 | 4.2:+12705575 | MS.gene08768:CDS |
| CCGCGATGGATTCTTCATGT+GGG | 0.687009 | 4.2:+12703522 | MS.gene08768:CDS |
| GAACATGTGAAGGGTCCATG+AGG | 0.693173 | 4.2:-12703010 | None:intergenic |
| AATTTGACTGGTACTCACAG+TGG | 0.710936 | 4.2:+12701746 | MS.gene08768:CDS |
| GTTACCGGAGGTCCTTCACG+AGG | 0.740052 | 4.2:-12702012 | None:intergenic |
| CCCACATGAAGAATCCATCG+CGG | 0.771717 | 4.2:-12703522 | None:intergenic |
| GAAGGAAGGATTGATCAATG+GGG | 0.799393 | 4.2:+12701919 | MS.gene08768:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTGACAATATTATA+CGG | + | chr4.2:12702890-12702909 | MS.gene08768:intron | 10.0% |
| !! | AAAAACTTCACATATATTAA+AGG | - | chr4.2:12704072-12704091 | None:intergenic | 15.0% |
| !! | AGAAATTATTAAATTTGAAC+AGG | + | chr4.2:12704452-12704471 | MS.gene08768:intron | 15.0% |
| !! | ATAATTAAAATGTAGTTGTT+TGG | - | chr4.2:12702853-12702872 | None:intergenic | 15.0% |
| !! | TGCAATTTAATGTTAAAAAA+TGG | + | chr4.2:12702162-12702181 | MS.gene08768:intron | 15.0% |
| !!! | AAAAATGTTTGTTACTTAAA+GGG | + | chr4.2:12702072-12702091 | MS.gene08768:intron | 15.0% |
| !!! | ACAACTACATTTTAATTATA+CGG | + | chr4.2:12702854-12702873 | MS.gene08768:intron | 15.0% |
| !!! | GTATTTTTTTTCAATAGATT+AGG | + | chr4.2:12703752-12703771 | MS.gene08768:intron | 15.0% |
| !!! | TTAACATTAAATTGCATTTT+TGG | - | chr4.2:12702158-12702177 | None:intergenic | 15.0% |
| !!! | TTTTTAGGAACAAAAAATAA+TGG | + | chr4.2:12703798-12703817 | MS.gene08768:intron | 15.0% |
| !! | AAATTAAAATCATACCCATA+AGG | - | chr4.2:12702517-12702536 | None:intergenic | 20.0% |
| !! | ACTAATCTGTGAATTATAAA+AGG | - | chr4.2:12703600-12703619 | None:intergenic | 20.0% |
| !! | ATAATTTCTAATCAAGAACA+TGG | - | chr4.2:12704441-12704460 | None:intergenic | 20.0% |
| !! | ATGAAAAAAAACAAAAACCT+CGG | + | chr4.2:12705076-12705095 | MS.gene08768:intron | 20.0% |
| !! | CAAATGTCTCTTATAAATAT+AGG | - | chr4.2:12704793-12704812 | None:intergenic | 20.0% |
| !! | CTATATAAATAAAAGATGCT+TGG | - | chr4.2:12703271-12703290 | None:intergenic | 20.0% |
| !! | CTCTTATAAATAAGATCAAA+GGG | + | chr4.2:12704883-12704902 | MS.gene08768:intron | 20.0% |
| !! | GAAAGATATACTATTATGTT+AGG | - | chr4.2:12702944-12702963 | None:intergenic | 20.0% |
| !! | GATTCAAAGATATTATTACA+AGG | + | chr4.2:12702422-12702441 | MS.gene08768:CDS | 20.0% |
| !! | TATAACTTAACAGTGAATAA+TGG | + | chr4.2:12703145-12703164 | MS.gene08768:intron | 20.0% |
| !! | TATAATAAGTTATCCAAGAA+AGG | - | chr4.2:12704307-12704326 | None:intergenic | 20.0% |
| !! | TCTCTTATAAATAAGATCAA+AGG | + | chr4.2:12704882-12704901 | MS.gene08768:intron | 20.0% |
| !! | TTCCTAAAAATAGTTTATTG+AGG | - | chr4.2:12703788-12703807 | None:intergenic | 20.0% |
| !!! | AAATCACACAATTTTTTTTC+TGG | - | chr4.2:12705367-12705386 | None:intergenic | 20.0% |
| !!! | AATCACACAATTTTTTTTCT+GGG | - | chr4.2:12705366-12705385 | None:intergenic | 20.0% |
| !!! | CTTAATGTAATTGTTTTTAG+TGG | + | chr4.2:12702596-12702615 | MS.gene08768:intron | 20.0% |
| !!! | CTTATTTATAAGAGACTTTT+GGG | - | chr4.2:12704877-12704896 | None:intergenic | 20.0% |
| !!! | GAAAAATGTTTGTTACTTAA+AGG | + | chr4.2:12702071-12702090 | MS.gene08768:intron | 20.0% |
| !!! | TCTTATTTATAAGAGACTTT+TGG | - | chr4.2:12704878-12704897 | None:intergenic | 20.0% |
| !!! | TGATATAATTATTGATGATC+TGG | + | chr4.2:12702627-12702646 | MS.gene08768:intron | 20.0% |
| !!! | TTCCTCAATAAACTATTTTT+AGG | + | chr4.2:12703783-12703802 | MS.gene08768:intron | 20.0% |
| !!! | TTGTTTTTTTTCATTTTCCT+CGG | - | chr4.2:12705070-12705089 | None:intergenic | 20.0% |
| !!! | TTTTACACTTGAAAATCTAT+TGG | - | chr4.2:12704127-12704146 | None:intergenic | 20.0% |
| !!! | TTTTCTGGGTTTTTTTTTTT+GGG | - | chr4.2:12705352-12705371 | None:intergenic | 20.0% |
| !!! | TTTTTCTGGGTTTTTTTTTT+TGG | - | chr4.2:12705353-12705372 | None:intergenic | 20.0% |
| ! | AAAAATGCTATAAACTCATG+AGG | + | chr4.2:12702816-12702835 | MS.gene08768:intron | 25.0% |
| ! | AAAAATGGAGAATCCAAATT+GGG | + | chr4.2:12705464-12705483 | MS.gene08768:intron | 25.0% |
| ! | AAAAGTAAATCTTCTTCTGA+AGG | - | chr4.2:12705510-12705529 | None:intergenic | 25.0% |
| ! | AACTTGGAGAAATATAATGA+AGG | - | chr4.2:12704746-12704765 | None:intergenic | 25.0% |
| ! | AATATGTGATCTTGACAAAA+GGG | + | chr4.2:12701783-12701802 | MS.gene08768:CDS | 25.0% |
| ! | AATTGATGTTGTTATATGGT+GGG | + | chr4.2:12701831-12701850 | MS.gene08768:CDS | 25.0% |
| ! | ACAATATCAAATTCAATCAC+TGG | + | chr4.2:12703730-12703749 | MS.gene08768:intron | 25.0% |
| ! | ACTGTTTGTTTATATTTCGA+CGG | - | chr4.2:12705162-12705181 | None:intergenic | 25.0% |
| ! | ATGAAAACTAGAAATGATGA+CGG | - | chr4.2:12705266-12705285 | None:intergenic | 25.0% |
| ! | ATTGAATGGTTAGATATCAA+TGG | + | chr4.2:12703202-12703221 | MS.gene08768:CDS | 25.0% |
| ! | CATGATAACAAAACAAACAA+TGG | - | chr4.2:12702275-12702294 | None:intergenic | 25.0% |
| ! | GTAATAATATCTTTGAATCG+AGG | - | chr4.2:12702421-12702440 | None:intergenic | 25.0% |
| ! | GTGTCATATATGAAACAAAT+AGG | - | chr4.2:12703116-12703135 | None:intergenic | 25.0% |
| ! | TAAAAATGGAGAATCCAAAT+TGG | + | chr4.2:12705463-12705482 | MS.gene08768:intron | 25.0% |
| ! | TAACTCACATAAGATTGAAT+TGG | + | chr4.2:12703998-12704017 | MS.gene08768:intron | 25.0% |
| ! | TATAAATAAAAGATGCTTGG+TGG | - | chr4.2:12703268-12703287 | None:intergenic | 25.0% |
| ! | TATTAAATTTGAACAGGTAC+TGG | + | chr4.2:12704458-12704477 | MS.gene08768:intron | 25.0% |
| ! | TTAATTGAACATGCAATTTC+AGG | + | chr4.2:12702967-12702986 | MS.gene08768:intron | 25.0% |
| ! | TTCATTATATTTCTCCAAGT+TGG | + | chr4.2:12704745-12704764 | MS.gene08768:intron | 25.0% |
| !! | AATACGCTGAAAACATATTT+TGG | - | chr4.2:12704277-12704296 | None:intergenic | 25.0% |
| !! | AATGTGTAACAATTTGCTTT+AGG | + | chr4.2:12702201-12702220 | MS.gene08768:intron | 25.0% |
| !! | ACTTATTTGAGTTTGTTTAG+TGG | + | chr4.2:12704190-12704209 | MS.gene08768:intron | 25.0% |
| !! | AGAATAATATCTTGTGGTTT+TGG | + | chr4.2:12702383-12702402 | MS.gene08768:CDS | 25.0% |
| !! | ATGTATATATGTCTACCTTT+TGG | - | chr4.2:12703065-12703084 | None:intergenic | 25.0% |
| !! | ATGTGTAACAATTTGCTTTA+GGG | + | chr4.2:12702202-12702221 | MS.gene08768:intron | 25.0% |
| !! | CAAACATTTTTCTTCAAAGA+CGG | - | chr4.2:12702063-12702082 | None:intergenic | 25.0% |
| !! | GTTTACTTTATTTGATCAAC+CGG | - | chr4.2:12703626-12703645 | None:intergenic | 25.0% |
| !! | TAATTCACAGATTAGTTATC+CGG | + | chr4.2:12703604-12703623 | MS.gene08768:intron | 25.0% |
| !! | TGCTAAAAATTTGTTCTATC+TGG | + | chr4.2:12704163-12704182 | MS.gene08768:intron | 25.0% |
| !! | TGTATATATGTCTACCTTTT+GGG | - | chr4.2:12703064-12703083 | None:intergenic | 25.0% |
| !!! | AAATGGTTAAAGAAGTATTC+AGG | + | chr4.2:12703895-12703914 | MS.gene08768:CDS | 25.0% |
| !!! | AATTATTGATGATCTGGTTT+TGG | + | chr4.2:12702633-12702652 | MS.gene08768:intron | 25.0% |
| !!! | ATTTGCACTCAGTTTTATAT+AGG | + | chr4.2:12703353-12703372 | MS.gene08768:intron | 25.0% |
| !!! | TCTCTTGAAGAAGAATTTTT+TGG | - | chr4.2:12705540-12705559 | None:intergenic | 25.0% |
| !!! | TTGTGATTGGTTTTAGAAAA+TGG | + | chr4.2:12703878-12703897 | MS.gene08768:CDS | 25.0% |
| AAACATAGTCTAAATGCAAC+AGG | + | chr4.2:12704407-12704426 | MS.gene08768:intron | 30.0% | |
| AAATCCAACACATATGCATA+TGG | + | chr4.2:12702568-12702587 | MS.gene08768:intron | 30.0% | |
| AAGAAATTCTATAGTTGTGC+TGG | + | chr4.2:12704618-12704637 | MS.gene08768:CDS | 30.0% | |
| AATTCTTCTTCAAGAGACAA+AGG | + | chr4.2:12705543-12705562 | MS.gene08768:intron | 30.0% | |
| AGCATGCAAATTATGCTATA+GGG | - | chr4.2:12702707-12702726 | None:intergenic | 30.0% | |
| AGTCATATAAGCTAACTGTT+TGG | + | chr4.2:12702913-12702932 | MS.gene08768:intron | 30.0% | |
| AGTTTATGCAAAAGTCAATG+AGG | - | chr4.2:12702302-12702321 | None:intergenic | 30.0% | |
| ATAACTAAACCAAACAATGC+AGG | - | chr4.2:12705651-12705670 | None:intergenic | 30.0% | |
| ATATTATTCTGCACAATGCT+TGG | - | chr4.2:12702373-12702392 | None:intergenic | 30.0% | |
| ATCATATCAGTTGCTTCAAT+TGG | + | chr4.2:12704553-12704572 | MS.gene08768:CDS | 30.0% | |
| CAATATGTGATCTTGACAAA+AGG | + | chr4.2:12701782-12701801 | MS.gene08768:CDS | 30.0% | |
| CACTTGATTTCTCAATTGAA+TGG | + | chr4.2:12703188-12703207 | MS.gene08768:CDS | 30.0% | |
| CATAAGATTGAATTGGAACA+TGG | + | chr4.2:12704005-12704024 | MS.gene08768:intron | 30.0% | |
| CATAGAAAATTTCTTCCGAA+CGG | - | chr4.2:12703412-12703431 | None:intergenic | 30.0% | |
| CATTCAATTGAGAAATCAAG+TGG | - | chr4.2:12703190-12703209 | None:intergenic | 30.0% | |
| CGAAAAACAATTGTGACATT+CGG | - | chr4.2:12705206-12705225 | None:intergenic | 30.0% | |
| CGAAACCCAAAATTAGTTAA+GGG | + | chr4.2:12702131-12702150 | MS.gene08768:intron | 30.0% | |
| GAAACAGAGATATTCCTTAT+GGG | + | chr4.2:12702500-12702519 | MS.gene08768:CDS | 30.0% | |
| GAATTGATGTTGTTATATGG+TGG | + | chr4.2:12701830-12701849 | MS.gene08768:CDS | 30.0% | |
| GCATTGAAAAATGCAAAAAC+TGG | - | chr4.2:12705121-12705140 | None:intergenic | 30.0% | |
| GTCTCTTATAAATATAGGAC+CGG | - | chr4.2:12704788-12704807 | None:intergenic | 30.0% | |
| TAAAAGGAATTACCTCAACA+TGG | - | chr4.2:12703584-12703603 | None:intergenic | 30.0% | |
| TAGCATGCAAATTATGCTAT+AGG | - | chr4.2:12702708-12702727 | None:intergenic | 30.0% | |
| TCATACACATCAATTTATGC+CGG | - | chr4.2:12704818-12704837 | None:intergenic | 30.0% | |
| TCATATCAGTTGCTTCAATT+GGG | + | chr4.2:12704554-12704573 | MS.gene08768:CDS | 30.0% | |
| TGGGAATTGATGTTGTTATA+TGG | + | chr4.2:12701827-12701846 | MS.gene08768:CDS | 30.0% | |
| TGTTGCATTTAGACTATGTT+TGG | - | chr4.2:12704408-12704427 | None:intergenic | 30.0% | |
| TTGTGCAGAATAATATCTTG+TGG | + | chr4.2:12702377-12702396 | MS.gene08768:CDS | 30.0% | |
| TTTATAAGAGACATTTGAGC+CGG | + | chr4.2:12704796-12704815 | MS.gene08768:intron | 30.0% | |
| TTTATATCTTCTCCATGTTG+AGG | + | chr4.2:12703569-12703588 | MS.gene08768:CDS | 30.0% | |
| ! | CTTTTGTCAAGATCACATAT+TGG | - | chr4.2:12701784-12701803 | None:intergenic | 30.0% |
| ! | TAATTACCGAAATTTTGAGC+CGG | + | chr4.2:12705005-12705024 | MS.gene08768:intron | 30.0% |
| ! | TTGGTCCCTTAACTAATTTT+GGG | - | chr4.2:12702139-12702158 | None:intergenic | 30.0% |
| ! | TTGTTTGGTTTAGTTATCGA+CGG | + | chr4.2:12705654-12705673 | MS.gene08768:CDS | 30.0% |
| ! | TTTGGTCCCTTAACTAATTT+TGG | - | chr4.2:12702140-12702159 | None:intergenic | 30.0% |
| !! | AATGATGGATCATCAATTTC+TGG | - | chr4.2:12702466-12702485 | None:intergenic | 30.0% |
| !! | ACATATTTTGGACATGTCAT+AGG | - | chr4.2:12704265-12704284 | None:intergenic | 30.0% |
| !! | ATCAATTTCTGGTATGAATG+GGG | - | chr4.2:12702455-12702474 | None:intergenic | 30.0% |
| !! | CATCAATTTCTGGTATGAAT+GGG | - | chr4.2:12702456-12702475 | None:intergenic | 30.0% |
| !! | GAACAAAAAATAATGGATGC+TGG | + | chr4.2:12703805-12703824 | MS.gene08768:CDS | 30.0% |
| !! | TATCATGGTTGGTGTTTTAA+TGG | + | chr4.2:12701958-12701977 | MS.gene08768:CDS | 30.0% |
| !! | TCATCAATTTCTGGTATGAA+TGG | - | chr4.2:12702457-12702476 | None:intergenic | 30.0% |
| AAATGGCACCTTTGTTCAAT+TGG | + | chr4.2:12705403-12705422 | MS.gene08768:intron | 35.0% | |
| AACACCAGTGGTTGTAAAAA+TGG | + | chr4.2:12705449-12705468 | MS.gene08768:intron | 35.0% | |
| AACCATCACACTTACAGATT+TGG | + | chr4.2:12703643-12703662 | MS.gene08768:intron | 35.0% | |
| AAGTTATCCAAGAAAGGTTG+TGG | - | chr4.2:12704301-12704320 | None:intergenic | 35.0% | |
| AATAATGGTGATAGAGAAGG+AGG | + | chr4.2:12703160-12703179 | MS.gene08768:CDS | 35.0% | |
| AATGCAAAAACTGGAATCCT+CGG | - | chr4.2:12705112-12705131 | None:intergenic | 35.0% | |
| AATGGCACCTTTGTTCAATT+GGG | + | chr4.2:12705404-12705423 | MS.gene08768:intron | 35.0% | |
| AATGGTTTCACTGCAAATCA+GGG | + | chr4.2:12703220-12703239 | MS.gene08768:CDS | 35.0% | |
| ACATCTGTTTCGTTTCACTT+TGG | - | chr4.2:12702099-12702118 | None:intergenic | 35.0% | |
| ACCATCACACTTACAGATTT+GGG | + | chr4.2:12703644-12703663 | MS.gene08768:intron | 35.0% | |
| AGATCACATATTGGCATCAA+AGG | - | chr4.2:12701775-12701794 | None:intergenic | 35.0% | |
| AGATTAGCACCTTTATCTGA+AGG | + | chr4.2:12701901-12701920 | MS.gene08768:CDS | 35.0% | |
| AGTTATGCTGTCGTAGATAA+TGG | + | chr4.2:12703667-12703686 | MS.gene08768:intron | 35.0% | |
| AGTTCATCAATGTCCCAATT+TGG | - | chr4.2:12705480-12705499 | None:intergenic | 35.0% | |
| CAAATCAGTCTACTATTACC+AGG | - | chr4.2:12703459-12703478 | None:intergenic | 35.0% | |
| CAAGTTCAGAGAAATTTGAC+TGG | + | chr4.2:12701734-12701753 | MS.gene08768:CDS | 35.0% | |
| CTACTACTGGAATCTGTTAA+TGG | - | chr4.2:12701679-12701698 | None:intergenic | 35.0% | |
| CTGGTAATAGTAGACTGATT+TGG | + | chr4.2:12703457-12703476 | MS.gene08768:CDS | 35.0% | |
| CTTATAAATATAGGACCGGA+GGG | - | chr4.2:12704784-12704803 | None:intergenic | 35.0% | |
| GAGTATATACGTAACCAACT+TGG | - | chr4.2:12704762-12704781 | None:intergenic | 35.0% | |
| GATTGGAGAGGAAAATATAG+TGG | + | chr4.2:12703928-12703947 | MS.gene08768:CDS | 35.0% | |
| GCGAAACCCAAAATTAGTTA+AGG | + | chr4.2:12702130-12702149 | MS.gene08768:intron | 35.0% | |
| GGAAACAGAGATATTCCTTA+TGG | + | chr4.2:12702499-12702518 | MS.gene08768:CDS | 35.0% | |
| GTGAAACGAAACAGATGTAA+AGG | + | chr4.2:12702101-12702120 | MS.gene08768:intron | 35.0% | |
| GTGAATAATGGTGATAGAGA+AGG | + | chr4.2:12703157-12703176 | MS.gene08768:intron | 35.0% | |
| GTTAATCCATAGTGTGCATA+TGG | - | chr4.2:12703035-12703054 | None:intergenic | 35.0% | |
| GTTTGTTTATATTTCGACGG+TGG | - | chr4.2:12705159-12705178 | None:intergenic | 35.0% | |
| TAATGCAGAAATCATCCGTT+CGG | + | chr4.2:12703394-12703413 | MS.gene08768:intron | 35.0% | |
| TACGAGATCAGAGACAAAAA+TGG | + | chr4.2:12705386-12705405 | MS.gene08768:intron | 35.0% | |
| TATGCCATATGCATATGTGT+TGG | - | chr4.2:12702575-12702594 | None:intergenic | 35.0% | |
| TCAATCCTTCCTTCAGATAA+AGG | - | chr4.2:12701913-12701932 | None:intergenic | 35.0% | |
| TCTTATAAATATAGGACCGG+AGG | - | chr4.2:12704785-12704804 | None:intergenic | 35.0% | |
| TCTTCAAGAGACAAAGGAAA+AGG | + | chr4.2:12705549-12705568 | MS.gene08768:intron | 35.0% | |
| TGAAGGAAGGATTGATCAAT+GGG | + | chr4.2:12701918-12701937 | MS.gene08768:CDS | 35.0% | |
| TGCATCTTCTGTTGAAACTA+AGG | + | chr4.2:12703306-12703325 | MS.gene08768:CDS | 35.0% | |
| TGGTCAAGAAAATTGGCATA+AGG | + | chr4.2:12703825-12703844 | MS.gene08768:CDS | 35.0% | |
| TTAGTGGCATAAACACTTGT+AGG | + | chr4.2:12704206-12704225 | MS.gene08768:intron | 35.0% | |
| TTGAATCGAGGATCAGTATT+TGG | - | chr4.2:12702409-12702428 | None:intergenic | 35.0% | |
| TTTACACTGCAACACATCTA+TGG | - | chr4.2:12702243-12702262 | None:intergenic | 35.0% | |
| ! | ACATTTTTCTTCAAAGACGG+CGG | - | chr4.2:12702060-12702079 | None:intergenic | 35.0% |
| ! | CCATCATTTGCTAGCTTAAT+GGG | + | chr4.2:12702478-12702497 | MS.gene08768:CDS | 35.0% |
| ! | TCCATCATTTGCTAGCTTAA+TGG | + | chr4.2:12702477-12702496 | MS.gene08768:CDS | 35.0% |
| ! | TCTGAACTTGTTTCATCTTC+AGG | - | chr4.2:12701724-12701743 | None:intergenic | 35.0% |
| !! | ATTCAGGTGATCAAGTTGAT+TGG | + | chr4.2:12703911-12703930 | MS.gene08768:CDS | 35.0% |
| !! | GATAAAGGTGCTAATCTATG+AGG | - | chr4.2:12701898-12701917 | None:intergenic | 35.0% |
| !! | TCAATTTCTGGTATGAATGG+GGG | - | chr4.2:12702454-12702473 | None:intergenic | 35.0% |
| !! | TTCTCCATTTTTACAACCAC+TGG | - | chr4.2:12705456-12705475 | None:intergenic | 35.0% |
| !!! | ACTAATTTTGGGTTTCGCTT+TGG | - | chr4.2:12702128-12702147 | None:intergenic | 35.0% |
| !!! | CTGGGTTTTTTTTTTTGGGT+TGG | - | chr4.2:12705348-12705367 | None:intergenic | 35.0% |
| !!! | TGAATTTTGAAGTGTTCCCA+CGG | - | chr4.2:12701630-12701649 | None:intergenic | 35.0% |
| AAAAGACGAAAATACCCCCT+CGG | + | chr4.2:12704978-12704997 | MS.gene08768:intron | 40.0% | |
| AAACAAAAACCTCGGCACTT+AGG | + | chr4.2:12705084-12705103 | MS.gene08768:intron | 40.0% | |
| AACTCTTGCAATTCACCGTA+TGG | - | chr4.2:12704486-12704505 | None:intergenic | 40.0% | |
| AATTTGACTGGTACTCACAG+TGG | + | chr4.2:12701746-12701765 | MS.gene08768:CDS | 40.0% | |
| ACAGAAGATGCAAGTTCATC+TGG | - | chr4.2:12703298-12703317 | None:intergenic | 40.0% | |
| ACCTCATGCTAAGAAAGTGA+TGG | + | chr4.2:12701807-12701826 | MS.gene08768:CDS | 40.0% | |
| AGGTTACAGTGTGTGTATCA+TGG | + | chr4.2:12701943-12701962 | MS.gene08768:CDS | 40.0% | |
| ATGGCACCTTTGTTCAATTG+GGG | + | chr4.2:12705405-12705424 | MS.gene08768:intron | 40.0% | |
| ATTGTTGCTGCAATGAAGCA+GGG | + | chr4.2:12704577-12704596 | MS.gene08768:CDS | 40.0% | |
| ATTTCGGTAATTAACTGCCG+AGG | - | chr4.2:12704998-12705017 | None:intergenic | 40.0% | |
| ATTTGTATTCCTGTGAGTCC+TGG | + | chr4.2:12703438-12703457 | MS.gene08768:CDS | 40.0% | |
| CAAATTGCTCCTGCATTGTT+TGG | + | chr4.2:12705639-12705658 | MS.gene08768:CDS | 40.0% | |
| CAACACTTCCATTAATCCGT+GGG | + | chr4.2:12701611-12701630 | MS.gene08768:CDS | 40.0% | |
| CAATGGTTTCACTGCAAATC+AGG | + | chr4.2:12703219-12703238 | MS.gene08768:CDS | 40.0% | |
| CACTACATTGAGGCTCTTAT+AGG | - | chr4.2:12704518-12704537 | None:intergenic | 40.0% | |
| CATGTTCCATATGCACACTA+TGG | + | chr4.2:12703026-12703045 | MS.gene08768:CDS | 40.0% | |
| CCCATTAAGCTAGCAAATGA+TGG | - | chr4.2:12702481-12702500 | None:intergenic | 40.0% | |
| CCTCATGCTAAGAAAGTGAT+GGG | + | chr4.2:12701808-12701827 | MS.gene08768:CDS | 40.0% | |
| CGTATTTCCACAACCTTTCT+TGG | + | chr4.2:12704291-12704310 | MS.gene08768:intron | 40.0% | |
| CTATAAGAGCCTCAATGTAG+TGG | + | chr4.2:12704516-12704535 | MS.gene08768:CDS | 40.0% | |
| CTGAAGGAAGGATTGATCAA+TGG | + | chr4.2:12701917-12701936 | MS.gene08768:CDS | 40.0% | |
| CTGGAATCTGTTAATGGAGA+AGG | - | chr4.2:12701673-12701692 | None:intergenic | 40.0% | |
| GAAGGAAGGATTGATCAATG+GGG | + | chr4.2:12701919-12701938 | MS.gene08768:CDS | 40.0% | |
| GCATGCTATGCTACTATTCT+AGG | + | chr4.2:12702720-12702739 | MS.gene08768:intron | 40.0% | |
| GGGATAGAAATGAGAATGCA+TGG | + | chr4.2:12701851-12701870 | MS.gene08768:CDS | 40.0% | |
| GTGCATATGGAACATGTGAA+GGG | - | chr4.2:12703022-12703041 | None:intergenic | 40.0% | |
| TACAGTGTGTGTATCATGGT+TGG | + | chr4.2:12701947-12701966 | MS.gene08768:CDS | 40.0% | |
| TACTTTCATTCGCATTGTCG+CGG | + | chr4.2:12704644-12704663 | MS.gene08768:CDS | 40.0% | |
| TAGCACCTTTATCTGAAGGA+AGG | + | chr4.2:12701905-12701924 | MS.gene08768:CDS | 40.0% | |
| TCAACACTTCCATTAATCCG+TGG | + | chr4.2:12701610-12701629 | MS.gene08768:CDS | 40.0% | |
| TCCCAAATCTGTAAGTGTGA+TGG | - | chr4.2:12703648-12703667 | None:intergenic | 40.0% | |
| TGATTGCAAGTTCATTCCTC+AGG | + | chr4.2:12701987-12702006 | MS.gene08768:CDS | 40.0% | |
| TGCCTTTGTTGGCATAAAAC+AGG | - | chr4.2:12703851-12703870 | None:intergenic | 40.0% | |
| TGCTGTTGACACATTGCATA+TGG | + | chr4.2:12704940-12704959 | MS.gene08768:intron | 40.0% | |
| TGGATGCTGGTCAAGAAAAT+TGG | + | chr4.2:12703818-12703837 | MS.gene08768:CDS | 40.0% | |
| TGGGACATTGATGAACTTGA+AGG | + | chr4.2:12705483-12705502 | MS.gene08768:intron | 40.0% | |
| TGTGCATATGGAACATGTGA+AGG | - | chr4.2:12703023-12703042 | None:intergenic | 40.0% | |
| TGTTAATGGAGAAGGTGACA+AGG | - | chr4.2:12701665-12701684 | None:intergenic | 40.0% | |
| TTAACTACCGAGGAAAACCT+CGG | + | chr4.2:12705034-12705053 | MS.gene08768:intron | 40.0% | |
| TTATATTTCGACGGTGGTGT+TGG | - | chr4.2:12705153-12705172 | None:intergenic | 40.0% | |
| TTTCGGTAATTAACTGCCGA+GGG | - | chr4.2:12704997-12705016 | None:intergenic | 40.0% | |
| ! | AACATGCAATTTCAGGTACG+AGG | + | chr4.2:12702974-12702993 | MS.gene08768:intron | 40.0% |
| ! | ATTTCATCGAAGAGCGTACA+TGG | - | chr4.2:12704717-12704736 | None:intergenic | 40.0% |
| ! | TGTAGGTTGTGAGACTGTTT+TGG | + | chr4.2:12704223-12704242 | MS.gene08768:intron | 40.0% |
| ! | TTAACTACCGAGGTTTTCCT+CGG | - | chr4.2:12705044-12705063 | None:intergenic | 40.0% |
| ! | TTTGGTTTAGTTATCGACGG+TGG | + | chr4.2:12705657-12705676 | MS.gene08768:CDS | 40.0% |
| !! | ATATGTCTACCTTTTGGGTC+TGG | - | chr4.2:12703059-12703078 | None:intergenic | 40.0% |
| !! | GGTACTGATTGAAAACCTCA+TGG | + | chr4.2:12702995-12703014 | MS.gene08768:CDS | 40.0% |
| !!! | AGCAGCTACACATGCTTTTT+TGG | - | chr4.2:12702347-12702366 | None:intergenic | 40.0% |
| !!! | GGTTGGTGTTTTAATGGATC+AGG | + | chr4.2:12701964-12701983 | MS.gene08768:CDS | 40.0% |
| AAGGCAGATGCTCTTGTGAT+TGG | + | chr4.2:12703865-12703884 | MS.gene08768:CDS | 45.0% | |
| AAGTCACAAAGGAACACCAG+TGG | + | chr4.2:12705437-12705456 | MS.gene08768:intron | 45.0% | |
| ACCCACAGTCCAAAGTTTCT+CGG | - | chr4.2:12703489-12703508 | None:intergenic | 45.0% | |
| ACCTCCTAGAGAACAGCTTA+TGG | + | chr4.2:12703966-12703985 | MS.gene08768:CDS | 45.0% | |
| AGAACAGCTTATGGACAGGT+AGG | + | chr4.2:12703975-12703994 | MS.gene08768:intron | 45.0% | |
| CACGTGAAGGTTACTACTAC+TGG | - | chr4.2:12701692-12701711 | None:intergenic | 45.0% | |
| CAGCAGCTCTATGAGCTTTA+AGG | - | chr4.2:12705608-12705627 | None:intergenic | 45.0% | |
| CAGTAGTAGTAACCTTCACG+TGG | + | chr4.2:12701690-12701709 | MS.gene08768:CDS | 45.0% | |
| CCCATCACTTTCTTAGCATG+AGG | - | chr4.2:12701811-12701830 | None:intergenic | 45.0% | |
| CTACTATTACCAGGACTCAC+AGG | - | chr4.2:12703450-12703469 | None:intergenic | 45.0% | |
| CTAGAGAACAGCTTATGGAC+AGG | + | chr4.2:12703971-12703990 | MS.gene08768:CDS | 45.0% | |
| CTGTCCATAAGCTGTTCTCT+AGG | - | chr4.2:12703973-12703992 | None:intergenic | 45.0% | |
| CTTAAAGCTCATAGAGCTGC+TGG | + | chr4.2:12705606-12705625 | MS.gene08768:CDS | 45.0% | |
| GAAGGATTGATCAATGGGGT+AGG | + | chr4.2:12701923-12701942 | MS.gene08768:CDS | 45.0% | |
| GATTGTTGCTGCAATGAAGC+AGG | + | chr4.2:12704576-12704595 | MS.gene08768:CDS | 45.0% | |
| GCATCACTTCCACTACATTG+AGG | - | chr4.2:12704528-12704547 | None:intergenic | 45.0% | |
| GGATTAACTCCAGACCCAAA+AGG | + | chr4.2:12703047-12703066 | MS.gene08768:CDS | 45.0% | |
| GGTGCGAAAGAAAGTCACAA+AGG | + | chr4.2:12705426-12705445 | MS.gene08768:intron | 45.0% | |
| GGTTACGTATATACTCCCTC+CGG | + | chr4.2:12704766-12704785 | MS.gene08768:intron | 45.0% | |
| GTTTCACTGCAAATCAGGGT+TGG | + | chr4.2:12703224-12703243 | MS.gene08768:CDS | 45.0% | |
| TCCATAAGCTGTTCTCTAGG+AGG | - | chr4.2:12703970-12703989 | None:intergenic | 45.0% | |
| TCCGAGAAACTTTGGACTGT+GGG | + | chr4.2:12703485-12703504 | MS.gene08768:CDS | 45.0% | |
| TCGACAAAATTGTACCGCGA+TGG | + | chr4.2:12703508-12703527 | MS.gene08768:CDS | 45.0% | |
| TGACACATTGCATATGGCTG+TGG | + | chr4.2:12704946-12704965 | MS.gene08768:intron | 45.0% | |
| TGGTGCTTTCCGAGAAACTT+TGG | + | chr4.2:12703477-12703496 | MS.gene08768:CDS | 45.0% | |
| TTAGTTATCGACGGTGGTGT+TGG | + | chr4.2:12705663-12705682 | MS.gene08768:CDS | 45.0% | |
| TTCCGAGAAACTTTGGACTG+TGG | + | chr4.2:12703484-12703503 | MS.gene08768:CDS | 45.0% | |
| TTCGCACCCCAATTGAACAA+AGG | - | chr4.2:12705414-12705433 | None:intergenic | 45.0% | |
| TTCGGTAATTAACTGCCGAG+GGG | - | chr4.2:12704996-12705015 | None:intergenic | 45.0% | |
| ! | GAAGTGTTCCCACGGATTAA+TGG | - | chr4.2:12701622-12701641 | None:intergenic | 45.0% |
| ! | GGCCTGTTTTATGCCAACAA+AGG | + | chr4.2:12703846-12703865 | MS.gene08768:CDS | 45.0% |
| !! | ACAAGAGCATCTGCCTTTGT+TGG | - | chr4.2:12703862-12703881 | None:intergenic | 45.0% |
| !! | GGCGGTTAAAAAGTACCAGA+AGG | - | chr4.2:12702042-12702061 | None:intergenic | 45.0% |
| !! | GGTGATCAAGTTGATTGGAG+AGG | + | chr4.2:12703916-12703935 | MS.gene08768:CDS | 45.0% |
| !! | GTACCAGAAGGACTAGTTAC+CGG | - | chr4.2:12702030-12702049 | None:intergenic | 45.0% |
| ACCTCGGTAGTTAACTACCG+AGG | + | chr4.2:12705050-12705069 | MS.gene08768:intron | 50.0% | |
| CAGGTTCATCATCCACGTGA+AGG | - | chr4.2:12701705-12701724 | None:intergenic | 50.0% | |
| CCCACATGAAGAATCCATCG+CGG | - | chr4.2:12703525-12703544 | None:intergenic | 50.0% | |
| GAACATGTGAAGGGTCCATG+AGG | - | chr4.2:12703013-12703032 | None:intergenic | 50.0% | |
| TCCTCGGTAGTTAACTACCG+AGG | - | chr4.2:12705054-12705073 | None:intergenic | 50.0% | |
| TCGGTAATTAACTGCCGAGG+GGG | - | chr4.2:12704995-12705014 | None:intergenic | 50.0% | |
| TGCTGCAATGAAGCAGGGAA+TGG | + | chr4.2:12704582-12704601 | MS.gene08768:CDS | 50.0% | |
| ! | ACCGCGATGGATTCTTCATG+TGG | + | chr4.2:12703521-12703540 | MS.gene08768:CDS | 50.0% |
| ! | AGCTGTTCTCTAGGAGGTGT+AGG | - | chr4.2:12703964-12703983 | None:intergenic | 50.0% |
| ! | CCGCGATGGATTCTTCATGT+GGG | + | chr4.2:12703522-12703541 | MS.gene08768:CDS | 50.0% |
| ! | CTGCAGCCGGCTCAAAATTT+CGG | - | chr4.2:12705014-12705033 | None:intergenic | 50.0% |
| ! | TATTTCGACGGTGGTGTTGG+TGG | - | chr4.2:12705150-12705169 | None:intergenic | 50.0% |
| ! | TCTAGGAGGTGTAGGAGGAA+GGG | - | chr4.2:12703956-12703975 | None:intergenic | 50.0% |
| ! | TGTTCTCTAGGAGGTGTAGG+AGG | - | chr4.2:12703961-12703980 | None:intergenic | 50.0% |
| !! | GAACAGGTACTGGAGCCATA+CGG | + | chr4.2:12704468-12704487 | MS.gene08768:intron | 50.0% |
| CCTCCGGTAACTAGTCCTTC+TGG | + | chr4.2:12702024-12702043 | MS.gene08768:intron | 55.0% | |
| CCTCGGTAGTTAACTGCAGC+CGG | - | chr4.2:12705027-12705046 | None:intergenic | 55.0% | |
| ! | CTCTAGGAGGTGTAGGAGGA+AGG | - | chr4.2:12703957-12703976 | None:intergenic | 55.0% |
| ! | GTTATCGACGGTGGTGTTGG+TGG | + | chr4.2:12705666-12705685 | MS.gene08768:CDS | 55.0% |
| !! | CCAGAAGGACTAGTTACCGG+AGG | - | chr4.2:12702027-12702046 | None:intergenic | 55.0% |
| ATTCCTCAGGCGCCTCGTGA+AGG | + | chr4.2:12702000-12702019 | MS.gene08768:CDS | 60.0% | |
| CCGGCTGCAGTTAACTACCG+AGG | + | chr4.2:12705024-12705043 | MS.gene08768:intron | 60.0% | |
| GTTACCGGAGGTCCTTCACG+AGG | - | chr4.2:12702015-12702034 | None:intergenic | 60.0% | |
| ! | ACCTCGGCACTTAGGTACCG+AGG | + | chr4.2:12705092-12705111 | MS.gene08768:intron | 60.0% |
| ! | TCCTCGGTACCTAAGTGCCG+AGG | - | chr4.2:12705096-12705115 | None:intergenic | 60.0% |
| !! | TGATGACGGTGAGAGACGCG+TGG | - | chr4.2:12705252-12705271 | None:intergenic | 60.0% |
| TGACGGTGAGAGACGCGTGG+AGG | - | chr4.2:12705249-12705268 | None:intergenic | 65.0% | |
| GGCGCCTCGTGAAGGACCTC+CGG | + | chr4.2:12702008-12702027 | MS.gene08768:CDS | 70.0% | |
| ! | GGTCCTTCACGAGGCGCCTG+AGG | - | chr4.2:12702006-12702025 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 12701586 | 12705701 | 12701586 | ID=MS.gene08768 |
| chr4.2 | mRNA | 12701586 | 12705701 | 12701586 | ID=MS.gene08768.t1;Parent=MS.gene08768 |
| chr4.2 | exon | 12701586 | 12702029 | 12701586 | ID=MS.gene08768.t1.exon1;Parent=MS.gene08768.t1 |
| chr4.2 | CDS | 12701586 | 12702029 | 12701586 | ID=cds.MS.gene08768.t1;Parent=MS.gene08768.t1 |
| chr4.2 | exon | 12702334 | 12702521 | 12702334 | ID=MS.gene08768.t1.exon2;Parent=MS.gene08768.t1 |
| chr4.2 | CDS | 12702334 | 12702521 | 12702334 | ID=cds.MS.gene08768.t1;Parent=MS.gene08768.t1 |
| chr4.2 | exon | 12702989 | 12703068 | 12702989 | ID=MS.gene08768.t1.exon3;Parent=MS.gene08768.t1 |
| chr4.2 | CDS | 12702989 | 12703068 | 12702989 | ID=cds.MS.gene08768.t1;Parent=MS.gene08768.t1 |
| chr4.2 | exon | 12703158 | 12703327 | 12703158 | ID=MS.gene08768.t1.exon4;Parent=MS.gene08768.t1 |
| chr4.2 | CDS | 12703158 | 12703327 | 12703158 | ID=cds.MS.gene08768.t1;Parent=MS.gene08768.t1 |
| chr4.2 | exon | 12703402 | 12703590 | 12703402 | ID=MS.gene08768.t1.exon5;Parent=MS.gene08768.t1 |
| chr4.2 | CDS | 12703402 | 12703590 | 12703402 | ID=cds.MS.gene08768.t1;Parent=MS.gene08768.t1 |
| chr4.2 | exon | 12703805 | 12703992 | 12703805 | ID=MS.gene08768.t1.exon6;Parent=MS.gene08768.t1 |
| chr4.2 | CDS | 12703805 | 12703992 | 12703805 | ID=cds.MS.gene08768.t1;Parent=MS.gene08768.t1 |
| chr4.2 | exon | 12704474 | 12704668 | 12704474 | ID=MS.gene08768.t1.exon7;Parent=MS.gene08768.t1 |
| chr4.2 | CDS | 12704474 | 12704668 | 12704474 | ID=cds.MS.gene08768.t1;Parent=MS.gene08768.t1 |
| chr4.2 | exon | 12705557 | 12705701 | 12705557 | ID=MS.gene08768.t1.exon8;Parent=MS.gene08768.t1 |
| chr4.2 | CDS | 12705557 | 12705701 | 12705557 | ID=cds.MS.gene08768.t1;Parent=MS.gene08768.t1 |
| Gene Sequence |
| Protein sequence |
