Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22076.t1 | XP_024635516.1 | 98.1 | 520 | 10 | 0 | 1 | 520 | 1 | 520 | 3.10E-278 | 967.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22076.t1 | Q84K11 | 74.0 | 534 | 125 | 3 | 1 | 520 | 4 | 537 | 3.5e-206 | 719.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22076.t1 | A0A072UVB9 | 96.2 | 530 | 10 | 1 | 1 | 520 | 1 | 530 | 6.1e-276 | 959.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene22076 | 0.828225 | 1.01E-54 | -1.69E-46 |
MS.gene050559 | MS.gene22076 | 0.814231 | 1.71E-51 | -1.69E-46 |
MS.gene050561 | MS.gene22076 | 0.815235 | 1.03E-51 | -1.69E-46 |
MS.gene050562 | MS.gene22076 | 0.813444 | 2.55E-51 | -1.69E-46 |
MS.gene051279 | MS.gene22076 | 0.83006 | 3.63E-55 | -1.69E-46 |
MS.gene051744 | MS.gene22076 | 0.821228 | 4.51E-53 | -1.69E-46 |
MS.gene053998 | MS.gene22076 | 0.843126 | 1.70E-58 | -1.69E-46 |
MS.gene05423 | MS.gene22076 | 0.81086 | 9.34E-51 | -1.69E-46 |
MS.gene054651 | MS.gene22076 | 0.815767 | 7.81E-52 | -1.69E-46 |
MS.gene056169 | MS.gene22076 | 0.80269 | 4.98E-49 | -1.69E-46 |
MS.gene056174 | MS.gene22076 | 0.85051 | 1.62E-60 | -1.69E-46 |
MS.gene05686 | MS.gene22076 | 0.835657 | 1.48E-56 | -1.69E-46 |
MS.gene057598 | MS.gene22076 | 0.802967 | 4.36E-49 | -1.69E-46 |
MS.gene057755 | MS.gene22076 | 0.806884 | 6.62E-50 | -1.69E-46 |
MS.gene058010 | MS.gene22076 | 0.814581 | 1.43E-51 | -1.69E-46 |
MS.gene058974 | MS.gene22076 | 0.829307 | 5.54E-55 | -1.69E-46 |
MS.gene059272 | MS.gene22076 | 0.803906 | 2.79E-49 | -1.69E-46 |
MS.gene059625 | MS.gene22076 | 0.808698 | 2.73E-50 | -1.69E-46 |
MS.gene060167 | MS.gene22076 | 0.827175 | 1.81E-54 | -1.69E-46 |
MS.gene060521 | MS.gene22076 | 0.808698 | 2.73E-50 | -1.69E-46 |
MS.gene061100 | MS.gene22076 | 0.803186 | 3.93E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene064737 | MS.gene22076 | PPI |
MS.gene22076 | MS.gene30654 | PPI |
MS.gene49154 | MS.gene22076 | PPI |
MS.gene69422 | MS.gene22076 | PPI |
MS.gene22076 | MS.gene60613 | PPI |
MS.gene62607 | MS.gene22076 | PPI |
MS.gene22076 | MS.gene061126 | PPI |
MS.gene040499 | MS.gene22076 | PPI |
MS.gene22076 | MS.gene006231 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22076.t1 | MTR_3g452710 | 97.358 | 530 | 4 | 1 | 1 | 520 | 1 | 530 | 0.0 | 1059 |
MS.gene22076.t1 | MTR_3g452710 | 85.962 | 520 | 16 | 3 | 1 | 520 | 1 | 463 | 0.0 | 890 |
MS.gene22076.t1 | MTR_2g100130 | 82.515 | 326 | 56 | 1 | 211 | 535 | 181 | 506 | 0.0 | 568 |
MS.gene22076.t1 | MTR_2g100130 | 82.515 | 326 | 55 | 2 | 211 | 535 | 181 | 505 | 0.0 | 564 |
MS.gene22076.t1 | MTR_2g100130 | 82.515 | 326 | 55 | 2 | 211 | 535 | 142 | 466 | 0.0 | 563 |
MS.gene22076.t1 | MTR_2g100130 | 83.601 | 311 | 50 | 1 | 211 | 520 | 181 | 491 | 0.0 | 552 |
MS.gene22076.t1 | MTR_2g100130 | 83.601 | 311 | 50 | 1 | 211 | 520 | 171 | 481 | 0.0 | 552 |
MS.gene22076.t1 | MTR_2g100130 | 83.601 | 311 | 50 | 1 | 211 | 520 | 72 | 382 | 0.0 | 550 |
MS.gene22076.t1 | MTR_2g100130 | 83.601 | 311 | 50 | 1 | 211 | 520 | 142 | 452 | 0.0 | 550 |
MS.gene22076.t1 | MTR_2g100160 | 84.887 | 311 | 46 | 1 | 211 | 520 | 91 | 401 | 0.0 | 550 |
MS.gene22076.t1 | MTR_2g100130 | 82.927 | 287 | 48 | 1 | 211 | 496 | 181 | 467 | 2.05e-177 | 509 |
MS.gene22076.t1 | MTR_1g074880 | 44.664 | 253 | 133 | 4 | 252 | 503 | 33 | 279 | 2.59e-71 | 231 |
MS.gene22076.t1 | MTR_1g074880 | 44.664 | 253 | 133 | 4 | 252 | 503 | 33 | 279 | 2.95e-71 | 231 |
MS.gene22076.t1 | MTR_7g112870 | 41.429 | 280 | 156 | 5 | 226 | 503 | 8 | 281 | 1.41e-70 | 229 |
MS.gene22076.t1 | MTR_7g116380 | 43.561 | 264 | 142 | 4 | 241 | 503 | 22 | 279 | 1.17e-69 | 226 |
MS.gene22076.t1 | MTR_1g079950 | 42.803 | 264 | 144 | 4 | 241 | 503 | 22 | 279 | 1.25e-69 | 226 |
MS.gene22076.t1 | MTR_7g116380 | 43.561 | 264 | 142 | 4 | 241 | 503 | 22 | 279 | 1.36e-69 | 226 |
MS.gene22076.t1 | MTR_1g079950 | 42.803 | 264 | 144 | 4 | 241 | 503 | 22 | 279 | 1.41e-69 | 227 |
MS.gene22076.t1 | MTR_1g079950 | 42.803 | 264 | 144 | 4 | 241 | 503 | 22 | 279 | 1.74e-69 | 226 |
MS.gene22076.t1 | MTR_1g079950 | 42.803 | 264 | 144 | 4 | 241 | 503 | 51 | 308 | 2.08e-69 | 227 |
MS.gene22076.t1 | MTR_5g081230 | 43.874 | 253 | 135 | 4 | 252 | 503 | 50 | 296 | 7.81e-69 | 224 |
MS.gene22076.t1 | MTR_8g005010 | 42.857 | 252 | 137 | 4 | 253 | 503 | 32 | 277 | 7.88e-69 | 223 |
MS.gene22076.t1 | MTR_8g098980 | 42.049 | 283 | 153 | 5 | 226 | 503 | 4 | 280 | 5.97e-68 | 222 |
MS.gene22076.t1 | MTR_1g074880 | 47.534 | 223 | 114 | 3 | 282 | 503 | 4 | 224 | 4.13e-67 | 218 |
MS.gene22076.t1 | MTR_1g074880 | 47.534 | 223 | 114 | 3 | 282 | 503 | 4 | 224 | 4.42e-67 | 218 |
MS.gene22076.t1 | MTR_1g043240 | 41.897 | 253 | 140 | 4 | 252 | 503 | 33 | 279 | 1.77e-66 | 218 |
MS.gene22076.t1 | MTR_1g079950 | 46.396 | 222 | 116 | 3 | 283 | 503 | 34 | 253 | 6.79e-65 | 214 |
MS.gene22076.t1 | MTR_8g062430 | 44.934 | 227 | 120 | 4 | 279 | 503 | 50 | 273 | 1.63e-58 | 197 |
MS.gene22076.t1 | MTR_8g085610 | 39.416 | 274 | 146 | 7 | 256 | 515 | 9 | 276 | 3.69e-58 | 195 |
MS.gene22076.t1 | MTR_5g037200 | 44.493 | 227 | 121 | 4 | 279 | 503 | 50 | 273 | 3.71e-58 | 196 |
MS.gene22076.t1 | MTR_7g107310 | 37.979 | 287 | 158 | 7 | 243 | 515 | 25 | 305 | 7.18e-58 | 195 |
MS.gene22076.t1 | MTR_5g093990 | 38.849 | 278 | 162 | 5 | 232 | 507 | 4 | 275 | 7.60e-58 | 195 |
MS.gene22076.t1 | MTR_8g085610 | 39.416 | 274 | 146 | 7 | 256 | 515 | 33 | 300 | 8.36e-58 | 195 |
MS.gene22076.t1 | MTR_1g039380 | 43.307 | 254 | 136 | 5 | 254 | 505 | 1 | 248 | 9.33e-58 | 194 |
MS.gene22076.t1 | MTR_1g039380 | 45.106 | 235 | 125 | 4 | 273 | 505 | 40 | 272 | 7.09e-57 | 192 |
MS.gene22076.t1 | MTR_8g072600 | 35.457 | 361 | 172 | 11 | 222 | 521 | 70 | 430 | 2.51e-52 | 185 |
MS.gene22076.t1 | MTR_2g087530 | 36.882 | 263 | 141 | 8 | 258 | 503 | 564 | 818 | 4.03e-41 | 159 |
MS.gene22076.t1 | MTR_2g087530 | 36.604 | 265 | 143 | 8 | 256 | 503 | 675 | 931 | 9.34e-41 | 158 |
MS.gene22076.t1 | MTR_1g089370 | 35.821 | 268 | 147 | 8 | 252 | 502 | 555 | 814 | 4.51e-40 | 155 |
MS.gene22076.t1 | MTR_4g050540 | 36.226 | 265 | 144 | 8 | 256 | 503 | 680 | 936 | 1.72e-39 | 154 |
MS.gene22076.t1 | MTR_8g072600 | 34.909 | 275 | 140 | 7 | 222 | 457 | 70 | 344 | 3.97e-37 | 140 |
MS.gene22076.t1 | MTR_2g099710 | 32.958 | 355 | 151 | 17 | 225 | 519 | 177 | 504 | 8.32e-37 | 144 |
MS.gene22076.t1 | MTR_5g037200 | 43.165 | 139 | 74 | 4 | 279 | 415 | 50 | 185 | 3.54e-28 | 112 |
MS.gene22076.t1 | MTR_8g107280 | 42.105 | 114 | 66 | 0 | 11 | 124 | 479 | 592 | 5.75e-18 | 87.8 |
MS.gene22076.t1 | MTR_5g009930 | 31.579 | 171 | 114 | 2 | 11 | 178 | 2 | 172 | 2.01e-17 | 83.6 |
MS.gene22076.t1 | MTR_5g009930 | 31.579 | 171 | 114 | 2 | 11 | 178 | 2 | 172 | 3.15e-17 | 84.0 |
MS.gene22076.t1 | MTR_1g030300 | 34.711 | 121 | 78 | 1 | 11 | 130 | 181 | 301 | 5.53e-17 | 84.0 |
MS.gene22076.t1 | MTR_4g094205 | 44.340 | 106 | 59 | 0 | 7 | 112 | 484 | 589 | 1.65e-16 | 83.2 |
MS.gene22076.t1 | MTR_1g084100 | 39.286 | 112 | 67 | 1 | 7 | 118 | 87 | 197 | 1.02e-15 | 80.1 |
MS.gene22076.t1 | MTR_5g012030 | 39.216 | 102 | 62 | 0 | 11 | 112 | 2 | 103 | 1.73e-15 | 79.7 |
MS.gene22076.t1 | MTR_5g012030 | 33.051 | 118 | 79 | 0 | 11 | 128 | 392 | 509 | 7.74e-14 | 74.7 |
MS.gene22076.t1 | MTR_2g078020 | 30.469 | 128 | 89 | 0 | 6 | 133 | 457 | 584 | 3.88e-15 | 79.0 |
MS.gene22076.t1 | MTR_2g078020 | 30.469 | 128 | 89 | 0 | 6 | 133 | 457 | 584 | 4.84e-15 | 78.6 |
MS.gene22076.t1 | MTR_6g053290 | 31.818 | 132 | 86 | 1 | 11 | 142 | 2 | 129 | 6.06e-13 | 70.9 |
MS.gene22076.t1 | MTR_6g053290 | 31.818 | 132 | 86 | 1 | 11 | 142 | 2 | 129 | 8.95e-13 | 70.1 |
MS.gene22076.t1 | MTR_1g041435 | 33.628 | 113 | 75 | 0 | 14 | 126 | 14 | 126 | 1.06e-12 | 69.7 |
MS.gene22076.t1 | MTR_4g102390 | 41.573 | 89 | 52 | 0 | 15 | 103 | 119 | 207 | 1.71e-12 | 69.7 |
MS.gene22076.t1 | MTR_3g087480 | 34.043 | 94 | 62 | 0 | 12 | 105 | 223 | 316 | 1.70e-11 | 67.0 |
MS.gene22076.t1 | MTR_7g059150 | 30.894 | 123 | 78 | 1 | 8 | 123 | 92 | 214 | 3.99e-11 | 64.3 |
MS.gene22076.t1 | MTR_7g115280 | 33.613 | 119 | 79 | 0 | 10 | 128 | 334 | 452 | 5.74e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22076.t1 | AT2G42810 | 79.808 | 520 | 98 | 4 | 3 | 520 | 5 | 519 | 0.0 | 840 |
MS.gene22076.t1 | AT2G42810 | 79.576 | 519 | 100 | 3 | 3 | 520 | 5 | 518 | 0.0 | 840 |
MS.gene22076.t1 | AT2G42810 | 74.324 | 518 | 76 | 4 | 3 | 520 | 5 | 465 | 0.0 | 782 |
MS.gene22076.t1 | AT2G42810 | 74.324 | 518 | 76 | 4 | 3 | 520 | 5 | 465 | 0.0 | 782 |
MS.gene22076.t1 | AT2G42810 | 74.324 | 518 | 76 | 4 | 3 | 520 | 5 | 465 | 0.0 | 782 |
MS.gene22076.t1 | AT5G27840 | 42.391 | 276 | 151 | 5 | 230 | 503 | 16 | 285 | 8.87e-71 | 229 |
MS.gene22076.t1 | AT5G27840 | 42.391 | 276 | 151 | 5 | 230 | 503 | 16 | 285 | 9.53e-71 | 230 |
MS.gene22076.t1 | AT5G27840 | 42.391 | 276 | 151 | 5 | 230 | 503 | 16 | 285 | 1.07e-70 | 229 |
MS.gene22076.t1 | AT5G27840 | 42.391 | 276 | 151 | 5 | 230 | 503 | 16 | 285 | 1.07e-70 | 229 |
MS.gene22076.t1 | AT2G29400 | 43.922 | 255 | 137 | 3 | 252 | 506 | 50 | 298 | 1.18e-70 | 229 |
MS.gene22076.t1 | AT5G59160 | 40.909 | 286 | 156 | 5 | 225 | 503 | 10 | 289 | 1.26e-70 | 229 |
MS.gene22076.t1 | AT5G59160 | 40.909 | 286 | 156 | 5 | 225 | 503 | 10 | 289 | 1.26e-70 | 229 |
MS.gene22076.t1 | AT5G59160 | 40.909 | 286 | 156 | 5 | 225 | 503 | 10 | 289 | 1.26e-70 | 229 |
MS.gene22076.t1 | AT3G46820 | 40.909 | 286 | 156 | 5 | 225 | 503 | 10 | 289 | 1.68e-70 | 228 |
MS.gene22076.t1 | AT2G39840 | 44.664 | 253 | 133 | 4 | 252 | 503 | 47 | 293 | 8.24e-69 | 224 |
MS.gene22076.t1 | AT5G43380 | 43.083 | 253 | 137 | 4 | 252 | 503 | 33 | 279 | 1.18e-68 | 224 |
MS.gene22076.t1 | AT5G43380 | 43.083 | 253 | 137 | 4 | 252 | 503 | 33 | 279 | 1.18e-68 | 224 |
MS.gene22076.t1 | AT5G43380 | 43.083 | 253 | 137 | 4 | 252 | 503 | 33 | 279 | 1.26e-68 | 224 |
MS.gene22076.t1 | AT3G05580 | 41.667 | 276 | 153 | 5 | 230 | 503 | 16 | 285 | 2.02e-68 | 223 |
MS.gene22076.t1 | AT4G11240 | 43.478 | 253 | 136 | 4 | 252 | 503 | 34 | 280 | 1.37e-67 | 221 |
MS.gene22076.t1 | AT1G64040 | 39.789 | 284 | 160 | 5 | 225 | 503 | 3 | 280 | 1.77e-65 | 216 |
MS.gene22076.t1 | AT2G42500 | 37.829 | 304 | 166 | 8 | 226 | 515 | 11 | 305 | 1.72e-60 | 202 |
MS.gene22076.t1 | AT4G26720 | 43.913 | 230 | 125 | 4 | 279 | 506 | 47 | 274 | 9.59e-60 | 200 |
MS.gene22076.t1 | AT5G55260 | 38.989 | 277 | 161 | 5 | 232 | 506 | 4 | 274 | 2.50e-59 | 199 |
MS.gene22076.t1 | AT1G10430 | 44.934 | 227 | 120 | 4 | 279 | 503 | 50 | 273 | 1.67e-58 | 197 |
MS.gene22076.t1 | AT1G10430 | 44.934 | 227 | 120 | 4 | 279 | 503 | 50 | 273 | 1.67e-58 | 197 |
MS.gene22076.t1 | AT1G59830 | 44.934 | 227 | 120 | 4 | 279 | 503 | 50 | 273 | 1.67e-58 | 197 |
MS.gene22076.t1 | AT3G58500 | 37.143 | 280 | 168 | 5 | 228 | 506 | 11 | 283 | 2.44e-58 | 197 |
MS.gene22076.t1 | AT3G05580 | 41.393 | 244 | 135 | 5 | 230 | 471 | 16 | 253 | 2.51e-58 | 195 |
MS.gene22076.t1 | AT1G69960 | 44.493 | 227 | 121 | 4 | 279 | 503 | 51 | 274 | 1.70e-57 | 194 |
MS.gene22076.t1 | AT1G50370 | 45.106 | 235 | 125 | 4 | 273 | 505 | 40 | 272 | 7.50e-57 | 192 |
MS.gene22076.t1 | AT3G19980 | 44.255 | 235 | 127 | 4 | 273 | 505 | 40 | 272 | 2.29e-55 | 188 |
MS.gene22076.t1 | AT5G63870 | 38.384 | 297 | 127 | 10 | 280 | 520 | 81 | 377 | 1.93e-53 | 187 |
MS.gene22076.t1 | AT5G63870 | 38.384 | 297 | 127 | 10 | 280 | 520 | 81 | 377 | 1.93e-53 | 187 |
MS.gene22076.t1 | AT5G55260 | 34.277 | 318 | 160 | 7 | 232 | 506 | 4 | 315 | 3.38e-52 | 181 |
MS.gene22076.t1 | AT2G42500 | 38.866 | 247 | 136 | 5 | 283 | 515 | 13 | 258 | 2.89e-50 | 174 |
MS.gene22076.t1 | AT1G59830 | 45.226 | 199 | 104 | 4 | 279 | 475 | 50 | 245 | 1.10e-49 | 172 |
MS.gene22076.t1 | AT1G03445 | 39.474 | 304 | 152 | 11 | 225 | 503 | 446 | 742 | 9.02e-48 | 177 |
MS.gene22076.t1 | AT1G03445 | 39.474 | 304 | 152 | 11 | 225 | 503 | 446 | 742 | 1.25e-47 | 177 |
MS.gene22076.t1 | AT4G03080 | 39.419 | 241 | 125 | 7 | 280 | 503 | 581 | 817 | 7.24e-41 | 158 |
MS.gene22076.t1 | AT2G27210 | 35.741 | 263 | 144 | 8 | 258 | 503 | 688 | 942 | 8.64e-38 | 149 |
MS.gene22076.t1 | AT2G27210 | 35.741 | 263 | 144 | 8 | 258 | 503 | 683 | 937 | 1.04e-37 | 149 |
MS.gene22076.t1 | AT1G48120 | 33.333 | 321 | 149 | 8 | 252 | 509 | 630 | 948 | 1.48e-37 | 149 |
MS.gene22076.t1 | AT5G63870 | 37.963 | 216 | 100 | 6 | 280 | 461 | 81 | 296 | 1.75e-37 | 140 |
MS.gene22076.t1 | AT1G08420 | 36.719 | 256 | 137 | 8 | 265 | 503 | 706 | 953 | 3.97e-37 | 147 |
MS.gene22076.t1 | AT1G08420 | 36.719 | 256 | 137 | 8 | 265 | 503 | 701 | 948 | 4.46e-37 | 147 |
MS.gene22076.t1 | AT5G10900 | 34.586 | 266 | 137 | 6 | 280 | 509 | 227 | 491 | 7.29e-35 | 139 |
MS.gene22076.t1 | AT5G10900 | 34.586 | 266 | 137 | 6 | 280 | 509 | 227 | 491 | 7.63e-35 | 139 |
MS.gene22076.t1 | AT5G10900 | 34.586 | 266 | 137 | 6 | 280 | 509 | 227 | 491 | 8.11e-35 | 139 |
MS.gene22076.t1 | AT2G42500 | 42.056 | 107 | 59 | 2 | 279 | 382 | 57 | 163 | 8.04e-21 | 90.1 |
MS.gene22076.t1 | AT2G42500 | 40.541 | 111 | 63 | 2 | 279 | 386 | 57 | 167 | 8.85e-21 | 90.5 |
MS.gene22076.t1 | AT2G42500 | 42.056 | 107 | 59 | 2 | 279 | 382 | 57 | 163 | 1.14e-20 | 90.1 |
MS.gene22076.t1 | AT3G17970 | 44.340 | 106 | 59 | 0 | 11 | 116 | 474 | 579 | 7.97e-16 | 80.9 |
MS.gene22076.t1 | AT5G09420 | 39.344 | 122 | 70 | 1 | 7 | 128 | 484 | 601 | 8.69e-16 | 80.9 |
MS.gene22076.t1 | AT1G62740 | 40.196 | 102 | 61 | 0 | 11 | 112 | 2 | 103 | 2.42e-15 | 79.3 |
MS.gene22076.t1 | AT1G62740 | 30.508 | 118 | 82 | 0 | 11 | 128 | 382 | 499 | 1.52e-11 | 67.4 |
MS.gene22076.t1 | AT4G11260 | 34.513 | 113 | 74 | 0 | 11 | 123 | 2 | 114 | 3.97e-15 | 77.4 |
MS.gene22076.t1 | AT1G12270 | 36.667 | 120 | 76 | 0 | 11 | 130 | 2 | 121 | 1.32e-14 | 77.0 |
MS.gene22076.t1 | AT1G12270 | 31.624 | 117 | 80 | 0 | 12 | 128 | 384 | 500 | 1.55e-11 | 67.4 |
MS.gene22076.t1 | AT4G08320 | 35.043 | 117 | 75 | 1 | 11 | 126 | 175 | 291 | 1.45e-14 | 76.3 |
MS.gene22076.t1 | AT1G56440 | 37.500 | 120 | 74 | 1 | 15 | 134 | 78 | 196 | 1.49e-14 | 76.6 |
MS.gene22076.t1 | AT1G56440 | 37.500 | 120 | 74 | 1 | 15 | 134 | 88 | 206 | 1.60e-14 | 76.6 |
MS.gene22076.t1 | AT4G08320 | 35.043 | 117 | 75 | 1 | 11 | 126 | 175 | 291 | 2.38e-14 | 75.5 |
MS.gene22076.t1 | AT4G12400 | 40.196 | 102 | 61 | 0 | 11 | 112 | 2 | 103 | 3.48e-14 | 75.5 |
MS.gene22076.t1 | AT4G12400 | 30.508 | 118 | 82 | 0 | 11 | 128 | 369 | 486 | 3.18e-11 | 66.2 |
MS.gene22076.t1 | AT4G12400 | 40.196 | 102 | 61 | 0 | 11 | 112 | 2 | 103 | 3.53e-14 | 75.9 |
MS.gene22076.t1 | AT4G12400 | 30.508 | 118 | 82 | 0 | 11 | 128 | 369 | 486 | 3.08e-11 | 66.2 |
MS.gene22076.t1 | AT1G04190 | 35.833 | 120 | 76 | 1 | 2 | 120 | 5 | 124 | 4.04e-14 | 73.9 |
MS.gene22076.t1 | AT4G22670 | 42.574 | 101 | 57 | 1 | 3 | 103 | 116 | 215 | 1.10e-13 | 73.6 |
MS.gene22076.t1 | AT4G23570 | 30.282 | 142 | 93 | 2 | 33 | 168 | 24 | 165 | 1.48e-12 | 69.7 |
MS.gene22076.t1 | AT4G23570 | 30.282 | 142 | 93 | 2 | 33 | 168 | 24 | 165 | 1.48e-12 | 69.7 |
MS.gene22076.t1 | AT3G58620 | 26.446 | 121 | 89 | 0 | 6 | 126 | 444 | 564 | 4.50e-12 | 69.3 |
MS.gene22076.t1 | AT3G58620 | 26.446 | 121 | 89 | 0 | 6 | 126 | 444 | 564 | 6.29e-12 | 68.9 |
MS.gene22076.t1 | AT2G42580 | 30.328 | 122 | 83 | 2 | 7 | 128 | 216 | 335 | 2.20e-11 | 67.0 |
MS.gene22076.t1 | AT4G23570 | 30.070 | 143 | 93 | 3 | 33 | 168 | 24 | 166 | 2.68e-11 | 65.9 |
MS.gene22076.t1 | AT5G65160 | 29.508 | 122 | 86 | 0 | 13 | 134 | 472 | 593 | 3.71e-11 | 66.2 |
MS.gene22076.t1 | AT5G10090 | 29.204 | 113 | 80 | 0 | 18 | 130 | 478 | 590 | 4.28e-11 | 65.9 |
MS.gene22076.t1 | AT3G14950 | 34.167 | 120 | 77 | 1 | 12 | 131 | 259 | 376 | 5.04e-11 | 65.9 |
Find 113 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAGAACCTTTGAATATTT+AGG | 0.215738 | 3.3:-39688231 | None:intergenic |
GTTACCTGATCGCAGTAATT+TGG | 0.240189 | 3.3:-39694523 | None:intergenic |
TTGGTCTGCTGTTGGTCCTT+GGG | 0.246842 | 3.3:+39691696 | MS.gene22076:CDS |
CGCTTGCTAGGTCCTCTTCC+AGG | 0.271139 | 3.3:-39694283 | None:intergenic |
GTTGGTCTGCTGTTGGTCCT+TGG | 0.283017 | 3.3:+39691695 | MS.gene22076:CDS |
TTCTTGAAGGATAATAATTT+AGG | 0.289596 | 3.3:+39694346 | MS.gene22076:CDS |
GAAAATCCATATCTATTTAA+TGG | 0.291516 | 3.3:+39693537 | MS.gene22076:CDS |
TCCTCTTCCAGGGAGAGGTT+GGG | 0.296073 | 3.3:-39694272 | None:intergenic |
AGAAGGGGATACTATTACTT+TGG | 0.310255 | 3.3:+39692589 | MS.gene22076:CDS |
TTTGTTGCATCAAGATCATT+TGG | 0.321646 | 3.3:-39690046 | None:intergenic |
GTAATGTTGGGTTTCAAATC+AGG | 0.336999 | 3.3:-39694722 | None:intergenic |
TATTCAGGAGCAAGAATAGA+AGG | 0.343533 | 3.3:+39692572 | MS.gene22076:CDS |
ACCTATTGAACGGAAATCTA+TGG | 0.344050 | 3.3:-39690161 | None:intergenic |
TGCTGTTGGTCCTTGGGGCA+TGG | 0.350317 | 3.3:+39691702 | MS.gene22076:CDS |
CTGAAATCCGATCAATTAAT+CGG | 0.356487 | 3.3:+39694097 | MS.gene22076:CDS |
CATCTTAGGCTCGAGGAATA+TGG | 0.358933 | 3.3:+39688168 | MS.gene22076:CDS |
AACAGAAGTGCTTGCATAAA+CGG | 0.363037 | 3.3:+39692645 | MS.gene22076:CDS |
GATGTCGAGCCACAGTATTC+AGG | 0.365324 | 3.3:+39692557 | MS.gene22076:intron |
AAATCTATGGATTCAGCTAT+TGG | 0.370862 | 3.3:-39690148 | None:intergenic |
ACACAAGCAATTGAGCTAAA+TGG | 0.386922 | 3.3:+39688108 | MS.gene22076:CDS |
CCTCTTCCAGGGAGAGGTTG+GGG | 0.387440 | 3.3:-39694271 | None:intergenic |
TCTATTTAATGGTGACTTTG+TGG | 0.389007 | 3.3:+39693548 | MS.gene22076:CDS |
AGTATTCTGCTGTTTACCTT+TGG | 0.392555 | 3.3:+39694005 | MS.gene22076:CDS |
TCCATAGATTTCCGTTCAAT+AGG | 0.396664 | 3.3:+39690160 | MS.gene22076:CDS |
AGGTGCTGCTCATCTCGGGC+TGG | 0.397594 | 3.3:+39688359 | MS.gene22076:CDS |
GTCCTCTTCCAGGGAGAGGT+TGG | 0.400996 | 3.3:-39694273 | None:intergenic |
CGTGGTGTAGGCCTTTCTTT+CGG | 0.405811 | 3.3:+39694304 | MS.gene22076:CDS |
AACATTTGTTGAACTATTTG+CGG | 0.408597 | 3.3:+39693981 | MS.gene22076:CDS |
AAGTCACCATTAAATAGATA+TGG | 0.408912 | 3.3:-39693543 | None:intergenic |
AAGAGCATGAACAAGATATA+TGG | 0.417540 | 3.3:+39693925 | MS.gene22076:CDS |
TGTTGTTATAGGGTTACTAT+AGG | 0.418812 | 3.3:+39688334 | MS.gene22076:intron |
AATGGTGACTTTGTGGATAG+AGG | 0.418839 | 3.3:+39693555 | MS.gene22076:CDS |
AGCAGTGACAGTAGCAGTTA+TGG | 0.421990 | 3.3:+39691616 | MS.gene22076:CDS |
AGGAAAGCGCCGCAATTCTT+CGG | 0.427163 | 3.3:+39691571 | MS.gene22076:intron |
TGGTGGAGTAGCTGCAATAC+TGG | 0.427651 | 3.3:+39691722 | MS.gene22076:CDS |
AGGCGCTTCAAATCGAATAA+AGG | 0.429523 | 3.3:-39694702 | None:intergenic |
GGTGCTGCTCATCTCGGGCT+GGG | 0.431866 | 3.3:+39688360 | MS.gene22076:CDS |
TGAGCTCAACGGGCTGCCTT+CGG | 0.437951 | 3.3:+39693512 | MS.gene22076:CDS |
TCGGTGGGGATGTTACAAAA+AGG | 0.445680 | 3.3:+39694323 | MS.gene22076:CDS |
TGCTCCAAATTACTGCGATC+AGG | 0.446063 | 3.3:+39694519 | MS.gene22076:CDS |
GTGTAGGCCTTTCTTTCGGT+GGG | 0.447700 | 3.3:+39694308 | MS.gene22076:CDS |
AGTAAAGGACGAGGGTTATG+AGG | 0.450555 | 3.3:+39694462 | MS.gene22076:CDS |
TCTCGGGCTGGGAAAATTCA+AGG | 0.456210 | 3.3:+39688371 | MS.gene22076:CDS |
AGGCGAGGTGCTGCTCATCT+CGG | 0.458886 | 3.3:+39688354 | MS.gene22076:CDS |
GGCGAGGTGCTGCTCATCTC+GGG | 0.462940 | 3.3:+39688355 | MS.gene22076:CDS |
GGTTGATGTGTGAGTTGCTA+TGG | 0.470365 | 3.3:+39694242 | MS.gene22076:CDS |
TGGTGCATCTATACCTTCCT+CGG | 0.471196 | 3.3:-39694133 | None:intergenic |
CACAAAACCGATTAATTGAT+CGG | 0.472508 | 3.3:-39694104 | None:intergenic |
GGATTTCGTAAAGAAAATGA+TGG | 0.477932 | 3.3:+39692610 | MS.gene22076:CDS |
CATTACTACATTTGCAGCAG+TGG | 0.484793 | 3.3:+39694739 | MS.gene22076:CDS |
CAGTGGTGGTGATGTTGGTC+AGG | 0.491022 | 3.3:+39691639 | MS.gene22076:CDS |
ATTGGACGCTTCACCGATCC+TGG | 0.495364 | 3.3:-39690130 | None:intergenic |
TAACATCCCCACCGAAAGAA+AGG | 0.498215 | 3.3:-39694315 | None:intergenic |
CTAGGTCCTCTTCCAGGGAG+AGG | 0.499390 | 3.3:-39694277 | None:intergenic |
AATTGTGGTTGGTCTGCTGT+TGG | 0.499758 | 3.3:+39691688 | MS.gene22076:CDS |
GGTGTAGGCCTTTCTTTCGG+TGG | 0.499934 | 3.3:+39694307 | MS.gene22076:CDS |
AGGCCTACACCACGCTTGCT+AGG | 0.500648 | 3.3:-39694295 | None:intergenic |
TGGTCTGCTGTTGGTCCTTG+GGG | 0.503725 | 3.3:+39691697 | MS.gene22076:CDS |
TGATGCAACAAAGAAATTGA+AGG | 0.507056 | 3.3:+39690057 | MS.gene22076:CDS |
CCCCAACCTCTCCCTGGAAG+AGG | 0.510597 | 3.3:+39694271 | MS.gene22076:CDS |
TGCTGCAAATGTAGTAATGT+TGG | 0.520819 | 3.3:-39694735 | None:intergenic |
CACTGCTGCTATGGCAACTT+CGG | 0.523744 | 3.3:-39691600 | None:intergenic |
AGTGATCCCCAACCTCTCCC+TGG | 0.523922 | 3.3:+39694265 | MS.gene22076:CDS |
TTTAAGTGCATGTCTCCATC+AGG | 0.524892 | 3.3:+39693615 | MS.gene22076:CDS |
GTGTATATAGATCAATTGCA+TGG | 0.529659 | 3.3:-39688089 | None:intergenic |
TGCTACTGTCACTGCTGCTA+TGG | 0.532576 | 3.3:-39691609 | None:intergenic |
GGTGCATCTATACCTTCCTC+GGG | 0.535421 | 3.3:-39694132 | None:intergenic |
GAAGAAGCTATTTCTGTACC+AGG | 0.536670 | 3.3:+39690112 | MS.gene22076:CDS |
GGACCTAGCAAGCGTGGTGT+AGG | 0.541640 | 3.3:+39694292 | MS.gene22076:CDS |
TATGGCAGTGGTGGTGATGT+TGG | 0.544128 | 3.3:+39691634 | MS.gene22076:CDS |
AGCTATTTCTGTACCAGGAT+CGG | 0.552634 | 3.3:+39690117 | MS.gene22076:CDS |
GCTGCTATGGCAACTTCGGT+TGG | 0.553389 | 3.3:-39691596 | None:intergenic |
TTGTGGCGATGTGCATGGTC+AGG | 0.553831 | 3.3:+39692856 | MS.gene22076:CDS |
ATCGTGCCTTTGCACATCTT+AGG | 0.554055 | 3.3:+39688154 | MS.gene22076:CDS |
CACAATTGTAGCTACTATTG+TGG | 0.556197 | 3.3:-39691672 | None:intergenic |
GCTGCAAATGTAGTAATGTT+GGG | 0.558396 | 3.3:-39694734 | None:intergenic |
CTTTGAATGCTTCATTAGCA+AGG | 0.559030 | 3.3:-39687710 | None:intergenic |
ATTCAGGAGCAAGAATAGAA+GGG | 0.564418 | 3.3:+39692573 | MS.gene22076:CDS |
TCAAAATAGTACCTATTGAA+CGG | 0.564875 | 3.3:-39690171 | None:intergenic |
ACAGTTATGTCGACAAGAGA+AGG | 0.566155 | 3.3:-39692809 | None:intergenic |
GCTTGCTAGGTCCTCTTCCA+GGG | 0.567459 | 3.3:-39694282 | None:intergenic |
TGTGCGATCTCATGAAGTAA+AGG | 0.569085 | 3.3:+39694447 | MS.gene22076:CDS |
TCAGCTATATATCTAGCTAG+AGG | 0.570449 | 3.3:+39693889 | MS.gene22076:intron |
ATCTCATGAAGTAAAGGACG+AGG | 0.570634 | 3.3:+39694453 | MS.gene22076:CDS |
ATAGTAGCTACAATTGTGGT+TGG | 0.570813 | 3.3:+39691677 | MS.gene22076:CDS |
CTTGCTAATGAAGCATTCAA+AGG | 0.570823 | 3.3:+39687711 | MS.gene22076:CDS |
AGTTGATCCTAAATATTCAA+AGG | 0.571712 | 3.3:+39688224 | MS.gene22076:CDS |
TCGTTTATCACATGAGCCAA+AGG | 0.573998 | 3.3:-39694021 | None:intergenic |
GACAGTAGCAGTTATGGCAG+TGG | 0.575800 | 3.3:+39691622 | MS.gene22076:CDS |
CGGTTGGCACCGAAGAATTG+CGG | 0.579866 | 3.3:-39691580 | None:intergenic |
ACTGTTTGTGGCGATGTGCA+TGG | 0.587689 | 3.3:+39692851 | MS.gene22076:CDS |
GTCGACATAACTGTTCCTCA+TGG | 0.591645 | 3.3:+39692818 | MS.gene22076:CDS |
CAGCTATATATCTAGCTAGA+GGG | 0.594475 | 3.3:+39693890 | MS.gene22076:intron |
TGTATATAGATCAATTGCAT+GGG | 0.597547 | 3.3:-39688088 | None:intergenic |
TGTAGGCCTTTCTTTCGGTG+GGG | 0.598927 | 3.3:+39694309 | MS.gene22076:CDS |
CACAATAGTAGCTACAATTG+TGG | 0.602498 | 3.3:+39691673 | MS.gene22076:CDS |
CTCGAGCCTAAGATGTGCAA+AGG | 0.604486 | 3.3:-39688160 | None:intergenic |
TTCAGGAGCAAGAATAGAAG+GGG | 0.604663 | 3.3:+39692574 | MS.gene22076:CDS |
ATTCTTGCTCCTGAATACTG+TGG | 0.606734 | 3.3:-39692566 | None:intergenic |
TGTTGGTCCTTGGGGCATGG+TGG | 0.613632 | 3.3:+39691705 | MS.gene22076:CDS |
CTTTGCACATCTTAGGCTCG+AGG | 0.615129 | 3.3:+39688161 | MS.gene22076:CDS |
GGAAGAGGACCTAGCAAGCG+TGG | 0.624373 | 3.3:+39694286 | MS.gene22076:CDS |
ACTTAAATGCAAACAAAGTG+AGG | 0.624984 | 3.3:-39693599 | None:intergenic |
TGCAATACTAGATGCTACAA+AGG | 0.625792 | 3.3:+39688194 | MS.gene22076:CDS |
AGCTACTCCACCATGCCCCA+AGG | 0.628173 | 3.3:-39691712 | None:intergenic |
TGAAGAGAATAATGTCGCAA+AGG | 0.629106 | 3.3:+39687671 | MS.gene22076:CDS |
TTATAGGGTTACTATAGGCG+AGG | 0.632884 | 3.3:+39688339 | MS.gene22076:intron |
GCATCTATACCTTCCTCGGG+AGG | 0.634980 | 3.3:-39694129 | None:intergenic |
GTGCAAAGGCACGATTAGCA+AGG | 0.640637 | 3.3:-39688146 | None:intergenic |
TTTCTGTAGATGGGTAACAA+AGG | 0.644956 | 3.3:+39694677 | MS.gene22076:intron |
GGTTATGAGGTTGATCATGA+CGG | 0.656315 | 3.3:+39694475 | MS.gene22076:CDS |
AGTAGCAGTTATGGCAGTGG+TGG | 0.672118 | 3.3:+39691625 | MS.gene22076:CDS |
TCTCATGAAGTAAAGGACGA+GGG | 0.727443 | 3.3:+39694454 | MS.gene22076:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 39687663 | 39694817 | 39687663 | ID=MS.gene22076 |
chr3.3 | mRNA | 39687663 | 39694817 | 39687663 | ID=MS.gene22076.t1;Parent=MS.gene22076 |
chr3.3 | exon | 39687663 | 39687732 | 39687663 | ID=MS.gene22076.t1.exon1;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39687663 | 39687732 | 39687663 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39688076 | 39688245 | 39688076 | ID=MS.gene22076.t1.exon2;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39688076 | 39688245 | 39688076 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39688345 | 39688416 | 39688345 | ID=MS.gene22076.t1.exon3;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39688345 | 39688416 | 39688345 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39690031 | 39690181 | 39690031 | ID=MS.gene22076.t1.exon4;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39690031 | 39690181 | 39690031 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39691573 | 39691743 | 39691573 | ID=MS.gene22076.t1.exon5;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39691573 | 39691743 | 39691573 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39692558 | 39692666 | 39692558 | ID=MS.gene22076.t1.exon6;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39692558 | 39692666 | 39692558 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39692760 | 39692877 | 39692760 | ID=MS.gene22076.t1.exon7;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39692760 | 39692877 | 39692760 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39693489 | 39693636 | 39693489 | ID=MS.gene22076.t1.exon8;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39693489 | 39693636 | 39693489 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39693893 | 39694141 | 39693893 | ID=MS.gene22076.t1.exon9;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39693893 | 39694141 | 39693893 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39694242 | 39694367 | 39694242 | ID=MS.gene22076.t1.exon10;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39694242 | 39694367 | 39694242 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39694440 | 39694540 | 39694440 | ID=MS.gene22076.t1.exon11;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39694440 | 39694540 | 39694440 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
chr3.3 | exon | 39694686 | 39694817 | 39694686 | ID=MS.gene22076.t1.exon12;Parent=MS.gene22076.t1 |
chr3.3 | CDS | 39694686 | 39694817 | 39694686 | ID=cds.MS.gene22076.t1;Parent=MS.gene22076.t1 |
Gene Sequence |
Protein sequence |