Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23782.t1 | XP_003629175.3 | 97.2 | 566 | 16 | 0 | 2 | 567 | 71 | 636 | 0.00E+00 | 1125.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23782.t1 | Q9SEY5 | 66.0 | 565 | 180 | 2 | 2 | 554 | 39 | 603 | 7.7e-220 | 764.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23782.t1 | A0A2Z6PPA1 | 82.7 | 600 | 49 | 1 | 11 | 555 | 1 | 600 | 1.2e-287 | 998.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23782 | MS.gene049681 | PPI |
| MS.gene025344 | MS.gene23782 | PPI |
| MS.gene23782 | MS.gene26216 | PPI |
| MS.gene061175 | MS.gene23782 | PPI |
| MS.gene23782 | MS.gene21937 | PPI |
| MS.gene99100 | MS.gene23782 | PPI |
| MS.gene76590 | MS.gene23782 | PPI |
| MS.gene23782 | MS.gene21691 | PPI |
| MS.gene008350 | MS.gene23782 | PPI |
| MS.gene23782 | MS.gene070590 | PPI |
| MS.gene23782 | MS.gene041843 | PPI |
| MS.gene23782 | MS.gene061174 | PPI |
| MS.gene23782 | MS.gene032916 | PPI |
| MS.gene22277 | MS.gene23782 | PPI |
| MS.gene23782 | MS.gene017279 | PPI |
| MS.gene23782 | MS.gene55232 | PPI |
| MS.gene041844 | MS.gene23782 | PPI |
| MS.gene23782 | MS.gene061578 | PPI |
| MS.gene23782 | MS.gene024710 | PPI |
| MS.gene009614 | MS.gene23782 | PPI |
| MS.gene23782 | MS.gene024712 | PPI |
| MS.gene23782 | MS.gene21689 | PPI |
| MS.gene23782 | MS.gene05028 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23782.t1 | MTR_8g074120 | 98.167 | 491 | 9 | 0 | 77 | 567 | 20 | 510 | 0.0 | 1006 |
| MS.gene23782.t1 | MTR_8g074040 | 82.979 | 564 | 94 | 1 | 6 | 567 | 38 | 601 | 0.0 | 992 |
| MS.gene23782.t1 | MTR_8g074040 | 80.745 | 483 | 91 | 1 | 87 | 567 | 1 | 483 | 0.0 | 827 |
| MS.gene23782.t1 | MTR_5g008800 | 63.043 | 552 | 202 | 1 | 11 | 562 | 1 | 550 | 0.0 | 754 |
| MS.gene23782.t1 | MTR_5g008820 | 60.846 | 544 | 209 | 2 | 11 | 554 | 1 | 540 | 0.0 | 734 |
| MS.gene23782.t1 | MTR_2g044180 | 52.747 | 546 | 247 | 4 | 19 | 553 | 15 | 560 | 0.0 | 599 |
| MS.gene23782.t1 | MTR_4g121600 | 50.355 | 564 | 261 | 5 | 6 | 554 | 2 | 561 | 0.0 | 593 |
| MS.gene23782.t1 | MTR_5g076240 | 49.639 | 554 | 265 | 7 | 11 | 554 | 1 | 550 | 0.0 | 568 |
| MS.gene23782.t1 | MTR_3g064420 | 48.468 | 555 | 270 | 4 | 11 | 551 | 1 | 553 | 0.0 | 566 |
| MS.gene23782.t1 | MTR_5g076220 | 50.361 | 554 | 260 | 7 | 11 | 553 | 1 | 550 | 0.0 | 536 |
| MS.gene23782.t1 | MTR_5g076200 | 50.089 | 561 | 259 | 8 | 11 | 557 | 1 | 554 | 0.0 | 533 |
| MS.gene23782.t1 | MTR_0161s0050 | 50.624 | 561 | 258 | 8 | 11 | 557 | 1 | 556 | 0.0 | 527 |
| MS.gene23782.t1 | MTR_2g044180 | 52.026 | 469 | 214 | 4 | 96 | 553 | 1 | 469 | 7.86e-177 | 508 |
| MS.gene23782.t1 | MTR_5g023730 | 47.905 | 549 | 271 | 9 | 12 | 552 | 3 | 544 | 7.07e-175 | 506 |
| MS.gene23782.t1 | MTR_0803s0020 | 30.435 | 552 | 353 | 9 | 15 | 555 | 226 | 757 | 1.25e-64 | 229 |
| MS.gene23782.t1 | MTR_8g039720 | 28.240 | 517 | 313 | 16 | 50 | 541 | 65 | 548 | 6.13e-45 | 167 |
| MS.gene23782.t1 | MTR_1g026310 | 26.824 | 507 | 333 | 13 | 49 | 541 | 67 | 549 | 3.80e-44 | 165 |
| MS.gene23782.t1 | MTR_2g095510 | 26.268 | 552 | 341 | 16 | 24 | 550 | 27 | 537 | 1.84e-42 | 160 |
| MS.gene23782.t1 | MTR_1569s0010 | 28.277 | 534 | 352 | 12 | 34 | 545 | 4 | 528 | 5.72e-42 | 158 |
| MS.gene23782.t1 | MTR_3g035130 | 27.083 | 528 | 338 | 13 | 33 | 546 | 15 | 509 | 2.26e-40 | 154 |
| MS.gene23782.t1 | MTR_4g057730 | 25.269 | 558 | 350 | 14 | 20 | 550 | 23 | 540 | 2.45e-38 | 148 |
| MS.gene23782.t1 | MTR_2g105570 | 26.796 | 515 | 342 | 14 | 50 | 550 | 54 | 547 | 4.09e-38 | 148 |
| MS.gene23782.t1 | MTR_3g460770 | 24.258 | 573 | 371 | 20 | 1 | 547 | 1 | 536 | 4.02e-36 | 142 |
| MS.gene23782.t1 | MTR_4g077900 | 25.787 | 508 | 316 | 14 | 62 | 545 | 1 | 471 | 8.04e-36 | 140 |
| MS.gene23782.t1 | MTR_5g027500 | 27.734 | 512 | 311 | 17 | 62 | 545 | 81 | 561 | 1.01e-34 | 138 |
| MS.gene23782.t1 | MTR_1g073180 | 27.183 | 504 | 320 | 11 | 47 | 541 | 58 | 523 | 3.06e-34 | 136 |
| MS.gene23782.t1 | MTR_5g007640 | 26.779 | 534 | 337 | 17 | 39 | 550 | 84 | 585 | 6.50e-34 | 136 |
| MS.gene23782.t1 | MTR_3g088880 | 25.230 | 543 | 352 | 15 | 27 | 553 | 53 | 557 | 7.03e-34 | 135 |
| MS.gene23782.t1 | MTR_3g088870 | 25.458 | 546 | 350 | 16 | 27 | 553 | 52 | 559 | 1.17e-33 | 135 |
| MS.gene23782.t1 | MTR_1g090737 | 26.027 | 511 | 333 | 15 | 51 | 547 | 84 | 563 | 1.65e-33 | 135 |
| MS.gene23782.t1 | MTR_4g005750 | 25.536 | 513 | 345 | 13 | 50 | 550 | 53 | 540 | 7.65e-33 | 132 |
| MS.gene23782.t1 | MTR_1g063110 | 26.909 | 550 | 330 | 20 | 24 | 541 | 28 | 537 | 1.28e-31 | 129 |
| MS.gene23782.t1 | MTR_1g063120 | 26.680 | 491 | 316 | 16 | 70 | 541 | 76 | 541 | 8.61e-31 | 127 |
| MS.gene23782.t1 | MTR_1g073180 | 26.572 | 493 | 316 | 10 | 47 | 531 | 80 | 534 | 1.02e-30 | 126 |
| MS.gene23782.t1 | MTR_3g035130 | 26.722 | 479 | 305 | 12 | 33 | 498 | 15 | 460 | 1.32e-30 | 125 |
| MS.gene23782.t1 | MTR_5g027480 | 26.523 | 509 | 309 | 18 | 62 | 545 | 80 | 548 | 4.67e-29 | 121 |
| MS.gene23782.t1 | MTR_4g057730 | 24.124 | 485 | 308 | 13 | 20 | 481 | 23 | 470 | 6.81e-28 | 117 |
| MS.gene23782.t1 | MTR_4g128337 | 24.609 | 512 | 325 | 16 | 52 | 539 | 61 | 535 | 6.93e-28 | 118 |
| MS.gene23782.t1 | MTR_2g030240 | 23.570 | 577 | 340 | 18 | 30 | 547 | 8 | 542 | 7.65e-28 | 118 |
| MS.gene23782.t1 | MTR_1586s0010 | 26.111 | 360 | 233 | 10 | 61 | 406 | 81 | 421 | 8.80e-27 | 113 |
| MS.gene23782.t1 | MTR_2g095510 | 25.110 | 454 | 275 | 15 | 24 | 453 | 27 | 439 | 2.61e-26 | 112 |
| MS.gene23782.t1 | MTR_7g109830 | 25.309 | 486 | 291 | 18 | 51 | 480 | 78 | 547 | 3.57e-25 | 110 |
| MS.gene23782.t1 | MTR_1054s0020 | 25.720 | 521 | 317 | 18 | 51 | 551 | 301 | 771 | 2.62e-24 | 108 |
| MS.gene23782.t1 | MTR_4g011790 | 25.879 | 398 | 247 | 12 | 180 | 544 | 209 | 591 | 3.90e-24 | 107 |
| MS.gene23782.t1 | MTR_4g011790 | 25.750 | 400 | 249 | 12 | 180 | 546 | 209 | 593 | 5.60e-24 | 106 |
| MS.gene23782.t1 | MTR_1g034360 | 24.514 | 514 | 308 | 18 | 20 | 475 | 52 | 543 | 6.11e-24 | 106 |
| MS.gene23782.t1 | MTR_2g030240 | 24.163 | 418 | 253 | 12 | 182 | 548 | 45 | 449 | 3.14e-23 | 103 |
| MS.gene23782.t1 | MTR_4g057730 | 23.077 | 468 | 300 | 13 | 20 | 464 | 23 | 453 | 1.45e-22 | 101 |
| MS.gene23782.t1 | MTR_4g011790 | 25.428 | 409 | 248 | 13 | 180 | 546 | 209 | 602 | 1.83e-22 | 102 |
| MS.gene23782.t1 | MTR_1g086600 | 23.340 | 497 | 294 | 15 | 52 | 488 | 101 | 570 | 3.42e-21 | 98.2 |
| MS.gene23782.t1 | MTR_4g068670 | 22.649 | 521 | 310 | 16 | 25 | 475 | 44 | 541 | 7.80e-21 | 97.1 |
| MS.gene23782.t1 | MTR_4g013210 | 25.128 | 390 | 244 | 12 | 190 | 546 | 66 | 440 | 4.49e-20 | 93.6 |
| MS.gene23782.t1 | MTR_8g099420 | 24.180 | 488 | 277 | 19 | 49 | 468 | 76 | 538 | 5.50e-20 | 94.4 |
| MS.gene23782.t1 | MTR_7g084850 | 22.883 | 555 | 322 | 20 | 56 | 548 | 210 | 720 | 2.68e-19 | 92.4 |
| MS.gene23782.t1 | MTR_4g013210 | 23.733 | 375 | 227 | 14 | 190 | 546 | 66 | 399 | 3.67e-18 | 87.4 |
| MS.gene23782.t1 | MTR_4g013210 | 23.733 | 375 | 227 | 14 | 190 | 546 | 218 | 551 | 7.12e-18 | 87.4 |
| MS.gene23782.t1 | MTR_5g009350 | 24.335 | 526 | 294 | 25 | 49 | 499 | 75 | 571 | 7.18e-18 | 87.4 |
| MS.gene23782.t1 | MTR_5g009350 | 24.554 | 505 | 282 | 23 | 49 | 482 | 75 | 551 | 7.69e-18 | 87.4 |
| MS.gene23782.t1 | MTR_5g009360 | 23.935 | 493 | 286 | 19 | 49 | 475 | 75 | 544 | 1.61e-17 | 86.7 |
| MS.gene23782.t1 | MTR_5g009350 | 24.297 | 498 | 278 | 23 | 49 | 475 | 75 | 544 | 1.74e-17 | 86.7 |
| MS.gene23782.t1 | MTR_5g009350 | 24.498 | 498 | 277 | 23 | 49 | 475 | 75 | 544 | 1.81e-17 | 86.3 |
| MS.gene23782.t1 | MTR_5g009360 | 26.776 | 366 | 186 | 15 | 171 | 475 | 74 | 418 | 3.47e-17 | 85.1 |
| MS.gene23782.t1 | MTR_4g013210 | 25.000 | 360 | 223 | 11 | 190 | 517 | 218 | 562 | 1.02e-15 | 80.5 |
| MS.gene23782.t1 | MTR_1g026430 | 24.302 | 358 | 237 | 10 | 49 | 394 | 67 | 402 | 6.24e-15 | 77.4 |
| MS.gene23782.t1 | MTR_1g026470 | 24.437 | 311 | 211 | 7 | 49 | 347 | 67 | 365 | 4.35e-14 | 74.7 |
| MS.gene23782.t1 | MTR_8g083170 | 29.508 | 183 | 103 | 7 | 313 | 483 | 457 | 625 | 3.12e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23782.t1 | AT2G17650 | 67.611 | 565 | 171 | 3 | 2 | 554 | 39 | 603 | 0.0 | 793 |
| MS.gene23782.t1 | AT1G20560 | 62.340 | 547 | 204 | 1 | 11 | 555 | 3 | 549 | 0.0 | 732 |
| MS.gene23782.t1 | AT1G20560 | 62.208 | 471 | 176 | 1 | 87 | 555 | 1 | 471 | 0.0 | 631 |
| MS.gene23782.t1 | AT5G16340 | 52.182 | 550 | 250 | 6 | 11 | 552 | 1 | 545 | 0.0 | 578 |
| MS.gene23782.t1 | AT3G16910 | 49.195 | 559 | 272 | 4 | 8 | 554 | 6 | 564 | 0.0 | 576 |
| MS.gene23782.t1 | AT5G16370 | 52.632 | 551 | 248 | 6 | 11 | 553 | 1 | 546 | 0.0 | 574 |
| MS.gene23782.t1 | AT1G66120 | 49.091 | 550 | 269 | 5 | 11 | 551 | 1 | 548 | 0.0 | 560 |
| MS.gene23782.t1 | AT1G76290 | 50.457 | 547 | 261 | 4 | 11 | 554 | 1 | 540 | 0.0 | 551 |
| MS.gene23782.t1 | AT1G75960 | 49.727 | 549 | 263 | 6 | 11 | 551 | 1 | 544 | 0.0 | 536 |
| MS.gene23782.t1 | AT1G21530 | 48.007 | 552 | 272 | 7 | 11 | 551 | 1 | 548 | 0.0 | 533 |
| MS.gene23782.t1 | AT1G65880 | 46.416 | 558 | 280 | 5 | 11 | 551 | 1 | 556 | 0.0 | 530 |
| MS.gene23782.t1 | AT1G21530 | 47.826 | 552 | 271 | 7 | 11 | 551 | 1 | 546 | 0.0 | 529 |
| MS.gene23782.t1 | AT1G21540 | 48.468 | 555 | 266 | 9 | 11 | 551 | 1 | 549 | 0.0 | 528 |
| MS.gene23782.t1 | AT1G65890 | 46.607 | 560 | 275 | 6 | 11 | 551 | 1 | 555 | 0.0 | 528 |
| MS.gene23782.t1 | AT1G77240 | 47.455 | 550 | 274 | 9 | 11 | 551 | 1 | 544 | 3.74e-180 | 519 |
| MS.gene23782.t1 | AT1G68270 | 43.525 | 556 | 268 | 8 | 11 | 551 | 1 | 525 | 4.34e-158 | 462 |
| MS.gene23782.t1 | AT1G20500 | 28.131 | 487 | 301 | 14 | 68 | 538 | 83 | 536 | 1.06e-41 | 158 |
| MS.gene23782.t1 | AT3G48990 | 27.977 | 529 | 341 | 15 | 29 | 546 | 9 | 508 | 7.48e-39 | 149 |
| MS.gene23782.t1 | AT1G20510 | 27.568 | 555 | 340 | 19 | 17 | 541 | 11 | 533 | 1.64e-38 | 149 |
| MS.gene23782.t1 | AT4G05160 | 26.112 | 517 | 333 | 14 | 52 | 550 | 57 | 542 | 6.53e-38 | 147 |
| MS.gene23782.t1 | AT5G63380 | 27.416 | 507 | 314 | 13 | 51 | 541 | 79 | 547 | 8.27e-38 | 147 |
| MS.gene23782.t1 | AT3G21240 | 26.504 | 532 | 352 | 13 | 28 | 547 | 45 | 549 | 1.35e-36 | 144 |
| MS.gene23782.t1 | AT1G62940 | 25.540 | 509 | 339 | 15 | 51 | 547 | 55 | 535 | 1.50e-35 | 140 |
| MS.gene23782.t1 | AT1G20480 | 26.122 | 490 | 332 | 12 | 61 | 541 | 86 | 554 | 3.33e-35 | 140 |
| MS.gene23782.t1 | AT1G65060 | 24.539 | 542 | 367 | 14 | 20 | 547 | 46 | 559 | 1.03e-32 | 132 |
| MS.gene23782.t1 | AT3G21230 | 26.769 | 523 | 339 | 14 | 48 | 553 | 74 | 569 | 1.11e-32 | 132 |
| MS.gene23782.t1 | AT4G19010 | 24.554 | 505 | 319 | 16 | 69 | 551 | 93 | 557 | 2.81e-32 | 131 |
| MS.gene23782.t1 | AT1G30520 | 24.570 | 582 | 329 | 17 | 30 | 547 | 13 | 548 | 1.32e-30 | 126 |
| MS.gene23782.t1 | AT1G30520 | 24.570 | 582 | 329 | 17 | 30 | 547 | 13 | 548 | 1.32e-30 | 126 |
| MS.gene23782.t1 | AT3G21240 | 26.824 | 466 | 303 | 12 | 28 | 482 | 45 | 483 | 1.81e-30 | 125 |
| MS.gene23782.t1 | AT3G21240 | 26.824 | 466 | 303 | 12 | 28 | 482 | 45 | 483 | 1.81e-30 | 125 |
| MS.gene23782.t1 | AT1G20510 | 27.328 | 494 | 298 | 18 | 17 | 481 | 11 | 472 | 4.93e-30 | 123 |
| MS.gene23782.t1 | AT5G38120 | 26.626 | 492 | 305 | 16 | 66 | 538 | 82 | 536 | 6.55e-30 | 124 |
| MS.gene23782.t1 | AT2G47240 | 25.641 | 585 | 328 | 23 | 52 | 564 | 20 | 569 | 6.00e-29 | 121 |
| MS.gene23782.t1 | AT2G47240 | 25.641 | 585 | 328 | 23 | 52 | 564 | 79 | 628 | 7.17e-29 | 122 |
| MS.gene23782.t1 | AT2G47240 | 25.641 | 585 | 328 | 23 | 52 | 564 | 79 | 628 | 7.17e-29 | 122 |
| MS.gene23782.t1 | AT2G47240 | 25.641 | 585 | 328 | 23 | 52 | 564 | 79 | 628 | 7.17e-29 | 122 |
| MS.gene23782.t1 | AT3G21230 | 26.923 | 494 | 322 | 13 | 48 | 525 | 74 | 544 | 4.99e-28 | 118 |
| MS.gene23782.t1 | AT1G51680 | 24.225 | 516 | 348 | 13 | 50 | 547 | 66 | 556 | 8.68e-28 | 118 |
| MS.gene23782.t1 | AT5G38120 | 26.452 | 465 | 287 | 15 | 66 | 512 | 82 | 509 | 8.11e-27 | 114 |
| MS.gene23782.t1 | AT1G51680 | 24.689 | 482 | 318 | 14 | 50 | 511 | 66 | 522 | 5.52e-25 | 109 |
| MS.gene23782.t1 | AT3G21230 | 27.069 | 447 | 291 | 11 | 48 | 482 | 74 | 497 | 6.47e-25 | 108 |
| MS.gene23782.t1 | AT1G64400 | 24.242 | 495 | 287 | 16 | 49 | 478 | 76 | 547 | 2.36e-24 | 108 |
| MS.gene23782.t1 | AT1G20510 | 26.850 | 473 | 285 | 18 | 17 | 460 | 11 | 451 | 5.76e-24 | 105 |
| MS.gene23782.t1 | AT1G51680 | 24.736 | 473 | 309 | 13 | 28 | 482 | 47 | 490 | 2.59e-22 | 100 |
| MS.gene23782.t1 | AT5G38120 | 26.037 | 434 | 266 | 15 | 66 | 481 | 82 | 478 | 7.79e-22 | 99.4 |
| MS.gene23782.t1 | AT5G38120 | 26.037 | 434 | 266 | 15 | 66 | 481 | 82 | 478 | 7.79e-22 | 99.4 |
| MS.gene23782.t1 | AT1G30520 | 24.547 | 497 | 277 | 16 | 30 | 477 | 13 | 460 | 3.25e-21 | 97.4 |
| MS.gene23782.t1 | AT1G30520 | 24.547 | 497 | 277 | 16 | 30 | 477 | 13 | 460 | 3.25e-21 | 97.4 |
| MS.gene23782.t1 | AT1G65060 | 24.385 | 447 | 297 | 13 | 20 | 453 | 46 | 464 | 9.30e-21 | 96.3 |
| MS.gene23782.t1 | AT4G23850 | 24.798 | 496 | 278 | 18 | 49 | 475 | 76 | 545 | 5.98e-20 | 94.4 |
| MS.gene23782.t1 | AT4G11030 | 24.187 | 492 | 291 | 15 | 49 | 478 | 76 | 547 | 9.98e-20 | 93.6 |
| MS.gene23782.t1 | AT1G49430 | 21.730 | 497 | 295 | 15 | 50 | 477 | 77 | 548 | 1.01e-19 | 93.6 |
| MS.gene23782.t1 | AT1G20490 | 27.346 | 373 | 233 | 14 | 68 | 429 | 83 | 428 | 6.91e-18 | 87.0 |
| MS.gene23782.t1 | AT1G20490 | 27.346 | 373 | 233 | 14 | 68 | 429 | 83 | 428 | 6.91e-18 | 87.0 |
| MS.gene23782.t1 | AT5G36880 | 22.061 | 553 | 352 | 20 | 44 | 548 | 144 | 665 | 4.90e-16 | 82.0 |
| MS.gene23782.t1 | AT5G36880 | 22.061 | 553 | 352 | 20 | 44 | 548 | 144 | 665 | 4.90e-16 | 82.0 |
| MS.gene23782.t1 | AT5G36880 | 22.061 | 553 | 352 | 20 | 44 | 548 | 144 | 665 | 4.90e-16 | 82.0 |
| MS.gene23782.t1 | AT5G36880 | 22.061 | 553 | 352 | 20 | 44 | 548 | 144 | 665 | 4.90e-16 | 82.0 |
| MS.gene23782.t1 | AT5G36880 | 22.061 | 553 | 352 | 20 | 44 | 548 | 194 | 715 | 5.32e-16 | 82.0 |
| MS.gene23782.t1 | AT1G77590 | 23.285 | 554 | 323 | 21 | 2 | 475 | 48 | 579 | 1.70e-15 | 80.1 |
| MS.gene23782.t1 | AT1G77590 | 25.255 | 392 | 207 | 15 | 153 | 475 | 59 | 433 | 5.00e-14 | 75.5 |
Find 131 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCTTTCCTGTTTATCTT+TGG | 0.196891 | 8.4:-30510665 | MS.gene23782:CDS |
| GACAGAACATCACTTGTTTA+TGG | 0.202985 | 8.4:-30512273 | MS.gene23782:CDS |
| AAGGCCTTGGGAAGCATTTC+TGG | 0.208212 | 8.4:-30509715 | MS.gene23782:CDS |
| TTCACGCCTTGATGCAAATA+TGG | 0.236806 | 8.4:-30511045 | MS.gene23782:CDS |
| TTTGTCACCTATCAACTTCT+TGG | 0.240894 | 8.4:-30512319 | MS.gene23782:CDS |
| ATGGTTCTTTGAAGTATAAT+TGG | 0.253303 | 8.4:-30512254 | MS.gene23782:CDS |
| GCTTCTTCTCTCTCCCAGTT+AGG | 0.257691 | 8.4:-30512201 | MS.gene23782:CDS |
| CTTTCGATGATGGAAGAAAA+TGG | 0.270591 | 8.4:-30510390 | MS.gene23782:CDS |
| GACTTTCCTTAGACAAATAT+TGG | 0.272166 | 8.4:+30510578 | None:intergenic |
| TTGGAACCAATATTTGTCTA+AGG | 0.292344 | 8.4:-30510584 | MS.gene23782:CDS |
| TCAAATATGCACAAGGAGTT+TGG | 0.293728 | 8.4:+30509893 | None:intergenic |
| GTTCCATTGTTTCATGCTAA+TGG | 0.313041 | 8.4:-30510639 | MS.gene23782:CDS |
| TGGTTCTTTGAAGTATAATT+GGG | 0.328576 | 8.4:-30512253 | MS.gene23782:CDS |
| TTGCTAGACCTGATGATCTA+TGG | 0.342123 | 8.4:-30509918 | MS.gene23782:CDS |
| AGATCGTTTGCCGCATTTCA+TGG | 0.346055 | 8.4:-30509818 | MS.gene23782:CDS |
| TAATGGTTGGTGCTTAGCTT+GGG | 0.361141 | 8.4:-30510622 | MS.gene23782:CDS |
| CTTCTTCTCTCTCCCAGTTA+GGG | 0.367339 | 8.4:-30512200 | MS.gene23782:CDS |
| CTCCACGAGAAATCCCTAAC+TGG | 0.368028 | 8.4:+30512187 | None:intergenic |
| TTTAATATTACTCACATGTA+TGG | 0.369041 | 8.4:-30510366 | MS.gene23782:CDS |
| TCATACATTGCAGGGACATT+AGG | 0.376737 | 8.4:+30511116 | None:intergenic |
| AGGGATTTCTCGTGGAGATA+TGG | 0.387671 | 8.4:-30512181 | MS.gene23782:intron |
| GGAACATTCCAAAGATAAAC+AGG | 0.397537 | 8.4:+30510657 | None:intergenic |
| GTTGGTGAGGTAATGTTTAG+AGG | 0.397931 | 8.4:-30510165 | MS.gene23782:CDS |
| TGGGGAGTGGCAGCACAGTT+TGG | 0.407012 | 8.4:-30510603 | MS.gene23782:CDS |
| GAGGTGTAATTTATACTTAT+AGG | 0.407275 | 8.4:+30510777 | None:intergenic |
| TTCAACAATGGATAGTGTTC+CGG | 0.410736 | 8.4:-30510202 | MS.gene23782:CDS |
| TCAATGATCATGACTAAAAT+CGG | 0.412285 | 8.4:+30510912 | None:intergenic |
| TTGCTTGTGAATGCTCCAAT+AGG | 0.413914 | 8.4:+30511015 | None:intergenic |
| GAGGGAGAAAGCCAAGGCCT+TGG | 0.414480 | 8.4:-30509728 | MS.gene23782:CDS |
| TAGCCATCCAGCGGTCTTAG+AGG | 0.414549 | 8.4:-30509950 | MS.gene23782:CDS |
| AGGACGCTGTTCCAGGATCA+TGG | 0.416440 | 8.4:-30512386 | MS.gene23782:CDS |
| GGGAAGCATTTCTGGACCCC+TGG | 0.421191 | 8.4:-30509707 | MS.gene23782:CDS |
| TCCATTGATTCCCATGATCC+TGG | 0.425895 | 8.4:+30512375 | None:intergenic |
| TCCAAAGATAAACAGGAAAG+AGG | 0.427884 | 8.4:+30510664 | None:intergenic |
| TGCTAGACCTGATGATCTAT+GGG | 0.429616 | 8.4:-30509917 | MS.gene23782:CDS |
| ATATTGTCAAATATGTTCTT+CGG | 0.431228 | 8.4:+30510552 | None:intergenic |
| AAATATGGTTTCAGTCCTAT+TGG | 0.431796 | 8.4:-30511030 | MS.gene23782:CDS |
| AGAAATGCTTCCCAAGGCCT+TGG | 0.433824 | 8.4:+30509717 | None:intergenic |
| CTAATGGTTGGTGCTTAGCT+TGG | 0.438996 | 8.4:-30510623 | MS.gene23782:CDS |
| TGACTGAAGACAACTCCTTT+AGG | 0.442881 | 8.4:+30510738 | None:intergenic |
| AGGGAGAAAGCCAAGGCCTT+GGG | 0.454712 | 8.4:-30509727 | MS.gene23782:CDS |
| GCTCTCTCCAAGAAGTTGAT+AGG | 0.457474 | 8.4:+30512312 | None:intergenic |
| TTGAAGGACATAATAGTATC+CGG | 0.458140 | 8.4:-30510015 | MS.gene23782:CDS |
| GTTTGGCCCCATAGATCATC+AGG | 0.467905 | 8.4:+30509910 | None:intergenic |
| CATATTTGAAATTGAAAGAT+GGG | 0.469899 | 8.4:-30509879 | MS.gene23782:CDS |
| ATGGATAGTGTTCCGGCTGA+TGG | 0.471080 | 8.4:-30510195 | MS.gene23782:CDS |
| CACAAGGTATCAGTGATAAC+CGG | 0.474826 | 8.4:-30510438 | MS.gene23782:CDS |
| AAATGCAGCTCATACATTGC+AGG | 0.475944 | 8.4:+30511107 | None:intergenic |
| AAGAAGCATTTAAAGATGGT+TGG | 0.479593 | 8.4:-30510098 | MS.gene23782:CDS |
| GATATGCCGAAAACTTCAAC+AGG | 0.480240 | 8.4:-30509772 | MS.gene23782:CDS |
| GCCACAGATCCTTTCGATGA+TGG | 0.483462 | 8.4:-30510400 | MS.gene23782:CDS |
| CGAAGTTGCTCGAGGAGCAT+TGG | 0.487528 | 8.4:-30510964 | MS.gene23782:CDS |
| ACAGAAGAAGCATTTAAAGA+TGG | 0.493385 | 8.4:-30510102 | MS.gene23782:CDS |
| CTCACAGAAACATGTGGTGC+AGG | 0.497007 | 8.4:-30510342 | MS.gene23782:CDS |
| GAAAGGATCTGTGGCGGTGG+AGG | 0.498372 | 8.4:+30510408 | None:intergenic |
| TCCAGGATCATGGGAATCAA+TGG | 0.503093 | 8.4:-30512376 | MS.gene23782:CDS |
| CTTCTTGGAGAGAGCAGCAA+AGG | 0.504058 | 8.4:-30512304 | MS.gene23782:CDS |
| GCATATTTGAAATTGAAAGA+TGG | 0.506247 | 8.4:-30509880 | MS.gene23782:CDS |
| GAAGACAACTCCTTTAGGCC+TGG | 0.511017 | 8.4:+30510743 | None:intergenic |
| CAGAGAATGGCTCCAGCCAT+TGG | 0.516988 | 8.4:+30511077 | None:intergenic |
| GGCACTACATCCAGGCCTAA+AGG | 0.520827 | 8.4:-30510753 | MS.gene23782:CDS |
| CATTTCGCAGTACCAATGGC+TGG | 0.521714 | 8.4:-30511089 | MS.gene23782:CDS |
| TCCAGCGGTCTTAGAGGCTG+CGG | 0.522604 | 8.4:-30509944 | MS.gene23782:CDS |
| TGGCGGTGGAGGAGAGCCTC+CGG | 0.523412 | 8.4:+30510419 | None:intergenic |
| CAGCTCAATCGAGGTAGAAA+CGG | 0.524106 | 8.4:-30509980 | MS.gene23782:CDS |
| ATTCGCAATCATATTCAAAA+CGG | 0.524788 | 8.4:+30510491 | None:intergenic |
| ACACCTCGGGCACTACATCC+AGG | 0.525311 | 8.4:-30510761 | MS.gene23782:CDS |
| CATTGTTTCATGCTAATGGT+TGG | 0.530364 | 8.4:-30510635 | MS.gene23782:CDS |
| ATACTATTATGTCCTTCAAC+CGG | 0.531022 | 8.4:+30510019 | None:intergenic |
| ATCGAAAGGATCTGTGGCGG+TGG | 0.540215 | 8.4:+30510405 | None:intergenic |
| AAAGATGGTTGGTTTCATAG+TGG | 0.540389 | 8.4:-30510087 | MS.gene23782:CDS |
| TGAAGGACATAATAGTATCC+GGG | 0.542556 | 8.4:-30510014 | MS.gene23782:CDS |
| GTGATTGAGAAGCTTTCTAT+CGG | 0.546702 | 8.4:+30510458 | None:intergenic |
| TGTCAAAGATACTTCAACAA+TGG | 0.547463 | 8.4:-30510214 | MS.gene23782:CDS |
| TGAATTAAGAGTACAGAGAA+TGG | 0.548168 | 8.4:+30511064 | None:intergenic |
| ATAAGTATAAATTACACCTC+GGG | 0.552773 | 8.4:-30510774 | MS.gene23782:CDS |
| TTGTGCTTGGAGACCTGAGT+GGG | 0.556554 | 8.4:-30510313 | MS.gene23782:CDS |
| CTGAAACCATATTTGCATCA+AGG | 0.559164 | 8.4:+30511039 | None:intergenic |
| ACCGCAGCCTCTAAGACCGC+TGG | 0.562499 | 8.4:+30509943 | None:intergenic |
| CGAAATCAAAGACCGGTTGA+AGG | 0.562728 | 8.4:-30510031 | MS.gene23782:CDS |
| GGACGCTGTTCCAGGATCAT+GGG | 0.566750 | 8.4:-30512385 | MS.gene23782:CDS |
| TTGGTGCTTAGCTTGGGGAG+TGG | 0.567534 | 8.4:-30510616 | MS.gene23782:CDS |
| GGCAAGGTGTACCACATGTA+GGG | 0.573061 | 8.4:-30510251 | MS.gene23782:CDS |
| TTGGTGAGGTAATGTTTAGA+GGG | 0.575529 | 8.4:-30510164 | MS.gene23782:CDS |
| AGGCAAGGTGTACCACATGT+AGG | 0.576963 | 8.4:-30510252 | MS.gene23782:CDS |
| TTCAATTTCAAATATGCACA+AGG | 0.580423 | 8.4:+30509886 | None:intergenic |
| TGTACCACATGTAGGGTTGG+AGG | 0.582743 | 8.4:-30510244 | MS.gene23782:CDS |
| TAAGCATAAAGTAACATACA+TGG | 0.584854 | 8.4:-30510526 | MS.gene23782:CDS |
| CCAAAGATAAACAGGAAAGA+GGG | 0.591892 | 8.4:+30510665 | None:intergenic |
| GGATCATGGGAATCAATGGA+AGG | 0.598769 | 8.4:-30512372 | MS.gene23782:CDS |
| GCTGCATTTCGCAGTACCAA+TGG | 0.599815 | 8.4:-30511093 | MS.gene23782:CDS |
| TCCCAGTTAGGGATTTCTCG+TGG | 0.600719 | 8.4:-30512189 | MS.gene23782:CDS |
| GGTTCTTTGAAGTATAATTG+GGG | 0.604503 | 8.4:-30512252 | MS.gene23782:CDS |
| AATGCAGCTCATACATTGCA+GGG | 0.604689 | 8.4:+30511108 | None:intergenic |
| GGAGGTAACATGTCCCACTC+AGG | 0.607903 | 8.4:+30510300 | None:intergenic |
| TCACAGAAACATGTGGTGCA+GGG | 0.609788 | 8.4:-30510341 | MS.gene23782:CDS |
| CAGCCTCTAAGACCGCTGGA+TGG | 0.610850 | 8.4:+30509947 | None:intergenic |
| ACAAAGGAACAGAATTTGCA+TGG | 0.610896 | 8.4:+30512337 | None:intergenic |
| AAGCATAAAGTAACATACAT+GGG | 0.612839 | 8.4:-30510525 | MS.gene23782:CDS |
| AGGGACATTAGGTGCTAGTG+TGG | 0.615984 | 8.4:+30511127 | None:intergenic |
| AGGTGTACCACATGTAGGGT+TGG | 0.618177 | 8.4:-30510247 | MS.gene23782:CDS |
| TATAAGTATAAATTACACCT+CGG | 0.620939 | 8.4:-30510775 | MS.gene23782:CDS |
| TCCACGAGAAATCCCTAACT+GGG | 0.623064 | 8.4:+30512188 | None:intergenic |
| GAAGGACATAATAGTATCCG+GGG | 0.624035 | 8.4:-30510013 | MS.gene23782:CDS |
| AATGGTTGGTGCTTAGCTTG+GGG | 0.624167 | 8.4:-30510621 | MS.gene23782:CDS |
| AGAGGGAATACAATGATGAG+TGG | 0.624606 | 8.4:-30510147 | MS.gene23782:CDS |
| GGGTCCAGAAATGCTTCCCA+AGG | 0.629284 | 8.4:+30509711 | None:intergenic |
| TTTGTGCTTGGAGACCTGAG+TGG | 0.630741 | 8.4:-30510314 | MS.gene23782:CDS |
| AGGCCTGGATGTAGTGCCCG+AGG | 0.631581 | 8.4:+30510758 | None:intergenic |
| TCCATCATCGAAAGGATCTG+TGG | 0.631677 | 8.4:+30510399 | None:intergenic |
| CAACCATTAGCATGAAACAA+TGG | 0.631816 | 8.4:+30510636 | None:intergenic |
| GTTACATCGAAATCAAAGAC+CGG | 0.638764 | 8.4:-30510038 | MS.gene23782:CDS |
| AAGAAGTTGATAGGTGACAA+AGG | 0.641447 | 8.4:+30512321 | None:intergenic |
| GCAATCATATTCAAAACGGT+AGG | 0.641843 | 8.4:+30510495 | None:intergenic |
| GATCATGGGAATCAATGGAA+GGG | 0.644377 | 8.4:-30512371 | MS.gene23782:CDS |
| TCAAAGATAAAAGCTAGGCA+AGG | 0.649836 | 8.4:-30510267 | MS.gene23782:CDS |
| CAACTACTCGAAGTTGCTCG+AGG | 0.650856 | 8.4:-30510972 | MS.gene23782:CDS |
| TTATCTAAACTCTCTCGCAA+CGG | 0.654030 | 8.4:-30510706 | MS.gene23782:CDS |
| CTTGCTGTGAAACACTCTGA+TGG | 0.654837 | 8.4:-30510060 | MS.gene23782:CDS |
| TAGAAAGCTTCTCAATCACA+AGG | 0.654920 | 8.4:-30510454 | MS.gene23782:CDS |
| AGAAAACATCAGCTCAATCG+AGG | 0.662335 | 8.4:-30509989 | MS.gene23782:CDS |
| CTGCACCACATGTTTCTGTG+AGG | 0.679321 | 8.4:+30510343 | None:intergenic |
| ATCATCGAAAGGATCTGTGG+CGG | 0.687585 | 8.4:+30510402 | None:intergenic |
| CATAAAGTAACATACATGGG+AGG | 0.691585 | 8.4:-30510522 | MS.gene23782:CDS |
| AGTTCCTCCAACCCTACATG+TGG | 0.698807 | 8.4:+30510240 | None:intergenic |
| AAGGTATCAGTGATAACCGG+AGG | 0.700503 | 8.4:-30510435 | MS.gene23782:CDS |
| GCTAGACCTGATGATCTATG+GGG | 0.730274 | 8.4:-30509916 | MS.gene23782:CDS |
| ATAGGATCTAATTCACTGCG+TGG | 0.732378 | 8.4:+30510795 | None:intergenic |
| GGAGTTGTCTTCAGTCACAG+AGG | 0.737629 | 8.4:-30510732 | MS.gene23782:CDS |
| AAGGACATAATAGTATCCGG+GGG | 0.748378 | 8.4:-30510012 | MS.gene23782:CDS |
| TATGGCCTCACAGAAACATG+TGG | 0.762816 | 8.4:-30510348 | MS.gene23782:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATAAAAATTGAGAT+GGG | + | chr8.4:30509787-30509806 | None:intergenic | 10.0% |
| !! | CACAATAAAAAAAATTAATA+TGG | + | chr8.4:30510348-30510367 | None:intergenic | 10.0% |
| !! | TAAATAAATAAAAATTGAGA+TGG | + | chr8.4:30509788-30509807 | None:intergenic | 10.0% |
| !!! | TTATTTTTTATAAAAGAAAG+TGG | - | chr8.4:30509805-30509824 | MS.gene23782:CDS | 10.0% |
| !! | AAAATGTAACATAAATATGA+AGG | + | chr8.4:30510270-30510289 | None:intergenic | 15.0% |
| !!! | AAAACAAATTTTGTTAAAAC+TGG | - | chr8.4:30509859-30509878 | MS.gene23782:CDS | 15.0% |
| !!! | ACTTTATCTTTAATTTATGT+GGG | - | chr8.4:30510430-30510449 | MS.gene23782:CDS | 15.0% |
| !!! | TACTTTATCTTTAATTTATG+TGG | - | chr8.4:30510429-30510448 | MS.gene23782:CDS | 15.0% |
| !! | AAAAATCAAAGATAAAAGCT+AGG | - | chr8.4:30512068-30512087 | MS.gene23782:intron | 20.0% |
| !! | AATGAATAGAGAATAAGTTT+AGG | + | chr8.4:30509914-30509933 | None:intergenic | 20.0% |
| !! | AATGATAACTTGATCAATTA+TGG | + | chr8.4:30510956-30510975 | None:intergenic | 20.0% |
| !! | ATAGTACAAAAGAAAAATAG+TGG | + | chr8.4:30511070-30511089 | None:intergenic | 20.0% |
| !! | ATATTGTCAAATATGTTCTT+CGG | + | chr8.4:30511791-30511810 | None:intergenic | 20.0% |
| !! | ATGAATAGAGAATAAGTTTA+GGG | + | chr8.4:30509913-30509932 | None:intergenic | 20.0% |
| !! | ATTGATCAAGTTATCATTTA+AGG | - | chr8.4:30510958-30510977 | MS.gene23782:CDS | 20.0% |
| !! | GTTAAAATCATATCTATACA+TGG | - | chr8.4:30510496-30510515 | MS.gene23782:CDS | 20.0% |
| !! | TATAAGTATAAATTACACCT+CGG | - | chr8.4:30511565-30511584 | MS.gene23782:intron | 20.0% |
| !! | TATGAAAAACTTATAGCTAT+TGG | - | chr8.4:30511497-30511516 | MS.gene23782:intron | 20.0% |
| !! | TTTAATATTACTCACATGTA+TGG | - | chr8.4:30511974-30511993 | MS.gene23782:intron | 20.0% |
| !!! | AAAAATTTCTTTTACAATCC+AGG | + | chr8.4:30512654-30512673 | None:intergenic | 20.0% |
| !!! | AAAATTTCTTTTACAATCCA+GGG | + | chr8.4:30512653-30512672 | None:intergenic | 20.0% |
| !!! | AACAATTATGCACATATTTT+TGG | + | chr8.4:30510773-30510792 | None:intergenic | 20.0% |
| !!! | AATAATGAAAAGATTTTCAC+TGG | - | chr8.4:30510733-30510752 | MS.gene23782:CDS | 20.0% |
| !!! | ATAATGATTTTGATATTGTG+AGG | - | chr8.4:30511522-30511541 | MS.gene23782:intron | 20.0% |
| !!! | CATATTTGAAATTGAAAGAT+GGG | - | chr8.4:30512461-30512480 | MS.gene23782:intron | 20.0% |
| !!! | GTAAAAATTATTTTGACAAG+AGG | - | chr8.4:30509681-30509700 | MS.gene23782:CDS | 20.0% |
| !!! | TAAAACTTGTTACTTTTTTC+AGG | - | chr8.4:30509934-30509953 | MS.gene23782:CDS | 20.0% |
| !!! | TTAAGGTCATTTTTCTAATT+AGG | - | chr8.4:30510975-30510994 | MS.gene23782:CDS | 20.0% |
| !!! | TTTATCTTTGATTTTTCTTC+AGG | + | chr8.4:30512064-30512083 | None:intergenic | 20.0% |
| ! | AAGCATAAAGTAACATACAT+GGG | - | chr8.4:30511815-30511834 | MS.gene23782:intron | 25.0% |
| ! | AGAGAGATAAAATGATAGTT+AGG | - | chr8.4:30510689-30510708 | MS.gene23782:CDS | 25.0% |
| ! | ATAAGAATCATTCCAACTTT+AGG | + | chr8.4:30510533-30510552 | None:intergenic | 25.0% |
| ! | ATAAGTATAAATTACACCTC+GGG | - | chr8.4:30511566-30511585 | MS.gene23782:intron | 25.0% |
| ! | ATGAGTCTCTATTTATACAT+AGG | + | chr8.4:30510929-30510948 | None:intergenic | 25.0% |
| ! | ATTCGCAATCATATTCAAAA+CGG | + | chr8.4:30511852-30511871 | None:intergenic | 25.0% |
| ! | GAGAGATAAAATGATAGTTA+GGG | - | chr8.4:30510690-30510709 | MS.gene23782:CDS | 25.0% |
| ! | GAGGTGTAATTTATACTTAT+AGG | + | chr8.4:30511566-30511585 | None:intergenic | 25.0% |
| ! | TAAGCATAAAGTAACATACA+TGG | - | chr8.4:30511814-30511833 | MS.gene23782:intron | 25.0% |
| ! | TCAATGATCATGACTAAAAT+CGG | + | chr8.4:30511431-30511450 | None:intergenic | 25.0% |
| ! | TGAAAATGAAGAAGATAACA+AGG | + | chr8.4:30510898-30510917 | None:intergenic | 25.0% |
| ! | TTCAATTTCAAATATGCACA+AGG | + | chr8.4:30512457-30512476 | None:intergenic | 25.0% |
| !! | AAATTTCTTTTACAATCCAG+GGG | + | chr8.4:30512652-30512671 | None:intergenic | 25.0% |
| !! | GCATATTTGAAATTGAAAGA+TGG | - | chr8.4:30512460-30512479 | MS.gene23782:intron | 25.0% |
| !! | TCTTGAAAAATGACTGTTTT+AGG | + | chr8.4:30512550-30512569 | None:intergenic | 25.0% |
| !!! | AGATACAAAAGTTTGTTTTG+AGG | - | chr8.4:30512593-30512612 | MS.gene23782:intron | 25.0% |
| !!! | ATGGTTCTTTGAAGTATAAT+TGG | - | chr8.4:30510086-30510105 | MS.gene23782:CDS | 25.0% |
| !!! | GATACAAAAGTTTGTTTTGA+GGG | - | chr8.4:30512594-30512613 | MS.gene23782:intron | 25.0% |
| !!! | TCTTTTTTCACTATTGTGTT+TGG | - | chr8.4:30510297-30510316 | MS.gene23782:CDS | 25.0% |
| !!! | TGGTTCTTTGAAGTATAATT+GGG | - | chr8.4:30510087-30510106 | MS.gene23782:CDS | 25.0% |
| AAAATCAGTTTGTAAGTGAG+AGG | - | chr8.4:30510381-30510400 | MS.gene23782:CDS | 30.0% | |
| AAAATGATAGTTAGGGTCTT+AGG | - | chr8.4:30510697-30510716 | MS.gene23782:CDS | 30.0% | |
| AAATATGGTTTCAGTCCTAT+TGG | - | chr8.4:30511310-30511329 | MS.gene23782:intron | 30.0% | |
| AAATGATAGTTAGGGTCTTA+GGG | - | chr8.4:30510698-30510717 | MS.gene23782:CDS | 30.0% | |
| AAGAAGATAACAAGGATAGT+AGG | + | chr8.4:30510890-30510909 | None:intergenic | 30.0% | |
| ATACTATTATGTCCTTCAAC+CGG | + | chr8.4:30512324-30512343 | None:intergenic | 30.0% | |
| GACTTTCCTTAGACAAATAT+TGG | + | chr8.4:30511765-30511784 | None:intergenic | 30.0% | |
| TGTCAAAGATACTTCAACAA+TGG | - | chr8.4:30512126-30512145 | MS.gene23782:intron | 30.0% | |
| TTGAAGGACATAATAGTATC+CGG | - | chr8.4:30512325-30512344 | MS.gene23782:CDS | 30.0% | |
| TTGGAACCAATATTTGTCTA+AGG | - | chr8.4:30511756-30511775 | MS.gene23782:intron | 30.0% | |
| TTTATCTCTCTTCTTGACAA+TGG | + | chr8.4:30510680-30510699 | None:intergenic | 30.0% | |
| TTTCCAAGTGTATGACAATT+TGG | + | chr8.4:30509750-30509769 | None:intergenic | 30.0% | |
| ! | ATCTTACCTGTTGAAGTTTT+CGG | + | chr8.4:30512577-30512596 | None:intergenic | 30.0% |
| ! | GGTGTTAAGTTTTCAGAAAT+TGG | - | chr8.4:30511020-30511039 | MS.gene23782:CDS | 30.0% |
| ! | GTTTCATGTTGATTGTAAAC+AGG | - | chr8.4:30511187-30511206 | MS.gene23782:intron | 30.0% |
| ! | TAGGGTGATAGTAATGTTTT+AGG | - | chr8.4:30510236-30510255 | MS.gene23782:CDS | 30.0% |
| ! | TGAATTAAGAGTACAGAGAA+TGG | + | chr8.4:30511279-30511298 | None:intergenic | 30.0% |
| ! | TTTTTCACTATTGTGTTTGG+TGG | - | chr8.4:30510300-30510319 | MS.gene23782:CDS | 30.0% |
| !! | AAGAAGCATTTAAAGATGGT+TGG | - | chr8.4:30512242-30512261 | MS.gene23782:CDS | 30.0% |
| !! | ACAGAAGAAGCATTTAAAGA+TGG | - | chr8.4:30512238-30512257 | MS.gene23782:CDS | 30.0% |
| !! | ATCTTTGATTTTTCTTCAGG+AGG | + | chr8.4:30512061-30512080 | None:intergenic | 30.0% |
| !! | GGTTCTTTGAAGTATAATTG+GGG | - | chr8.4:30510088-30510107 | MS.gene23782:CDS | 30.0% |
| !! | TCATTTTTCTAATTAGGTGG+TGG | - | chr8.4:30510981-30511000 | MS.gene23782:CDS | 30.0% |
| !!! | AGGTCATTTTTCTAATTAGG+TGG | - | chr8.4:30510978-30510997 | MS.gene23782:CDS | 30.0% |
| !!! | GCACATATTTTTGGAAACAA+TGG | + | chr8.4:30510764-30510783 | None:intergenic | 30.0% |
| ACAAAGGAACAGAATTTGCA+TGG | + | chr8.4:30510006-30510025 | None:intergenic | 35.0% | |
| ATGCCAAATTGTCATACACT+TGG | - | chr8.4:30509744-30509763 | MS.gene23782:CDS | 35.0% | |
| CAACCATTAGCATGAAACAA+TGG | + | chr8.4:30511707-30511726 | None:intergenic | 35.0% | |
| CATAAAGTAACATACATGGG+AGG | - | chr8.4:30511818-30511837 | MS.gene23782:intron | 35.0% | |
| CATTGTTTCATGCTAATGGT+TGG | - | chr8.4:30511705-30511724 | MS.gene23782:intron | 35.0% | |
| CCAAAGATAAACAGGAAAGA+GGG | + | chr8.4:30511678-30511697 | None:intergenic | 35.0% | |
| CTATCACTGTTCTCACTTTA+GGG | - | chr8.4:30510218-30510237 | MS.gene23782:CDS | 35.0% | |
| CTGAAACCATATTTGCATCA+AGG | + | chr8.4:30511304-30511323 | None:intergenic | 35.0% | |
| GACAGAACATCACTTGTTTA+TGG | - | chr8.4:30510067-30510086 | MS.gene23782:CDS | 35.0% | |
| GCAATCATATTCAAAACGGT+AGG | + | chr8.4:30511848-30511867 | None:intergenic | 35.0% | |
| GGAACATTCCAAAGATAAAC+AGG | + | chr8.4:30511686-30511705 | None:intergenic | 35.0% | |
| GTGATTGAGAAGCTTTCTAT+CGG | + | chr8.4:30511885-30511904 | None:intergenic | 35.0% | |
| GTTACATCGAAATCAAAGAC+CGG | - | chr8.4:30512302-30512321 | MS.gene23782:CDS | 35.0% | |
| GTTCATGCAATTCCTAAAGT+TGG | - | chr8.4:30510518-30510537 | MS.gene23782:CDS | 35.0% | |
| GTTCCATTGTTTCATGCTAA+TGG | - | chr8.4:30511701-30511720 | MS.gene23782:intron | 35.0% | |
| TAGAAAGCTTCTCAATCACA+AGG | - | chr8.4:30511886-30511905 | MS.gene23782:intron | 35.0% | |
| TCAAAGATAAAAGCTAGGCA+AGG | - | chr8.4:30512073-30512092 | MS.gene23782:intron | 35.0% | |
| TCAAATATGCACAAGGAGTT+TGG | + | chr8.4:30512450-30512469 | None:intergenic | 35.0% | |
| TCCAAAGATAAACAGGAAAG+AGG | + | chr8.4:30511679-30511698 | None:intergenic | 35.0% | |
| TCTATCACTGTTCTCACTTT+AGG | - | chr8.4:30510217-30510236 | MS.gene23782:CDS | 35.0% | |
| TGAAGGACATAATAGTATCC+GGG | - | chr8.4:30512326-30512345 | MS.gene23782:CDS | 35.0% | |
| TTATCTAAACTCTCTCGCAA+CGG | - | chr8.4:30511634-30511653 | MS.gene23782:intron | 35.0% | |
| TTCAACAATGGATAGTGTTC+CGG | - | chr8.4:30512138-30512157 | MS.gene23782:intron | 35.0% | |
| TTGGTGAGGTAATGTTTAGA+GGG | - | chr8.4:30512176-30512195 | MS.gene23782:intron | 35.0% | |
| TTTGTCACCTATCAACTTCT+TGG | - | chr8.4:30510021-30510040 | MS.gene23782:CDS | 35.0% | |
| ! | CATTTTCTTCCATCATCGAA+AGG | + | chr8.4:30511952-30511971 | None:intergenic | 35.0% |
| !! | AAAGATGGTTGGTTTCATAG+TGG | - | chr8.4:30512253-30512272 | MS.gene23782:CDS | 35.0% |
| !! | AAGAAGTTGATAGGTGACAA+AGG | + | chr8.4:30510022-30510041 | None:intergenic | 35.0% |
| !! | CTTTCGATGATGGAAGAAAA+TGG | - | chr8.4:30511950-30511969 | MS.gene23782:intron | 35.0% |
| AAATGCAGCTCATACATTGC+AGG | + | chr8.4:30511236-30511255 | None:intergenic | 40.0% | |
| AAGGACATAATAGTATCCGG+GGG | - | chr8.4:30512328-30512347 | MS.gene23782:CDS | 40.0% | |
| AATGCAGCTCATACATTGCA+GGG | + | chr8.4:30511235-30511254 | None:intergenic | 40.0% | |
| AGAAAACATCAGCTCAATCG+AGG | - | chr8.4:30512351-30512370 | MS.gene23782:CDS | 40.0% | |
| AGAGGGAATACAATGATGAG+TGG | - | chr8.4:30512193-30512212 | MS.gene23782:CDS | 40.0% | |
| AGGCGACATTTACTTTGTGA+TGG | + | chr8.4:30510870-30510889 | None:intergenic | 40.0% | |
| ATAGGATCTAATTCACTGCG+TGG | + | chr8.4:30511548-30511567 | None:intergenic | 40.0% | |
| CCCTCTTTCCTGTTTATCTT+TGG | - | chr8.4:30511675-30511694 | MS.gene23782:intron | 40.0% | |
| GAAGGACATAATAGTATCCG+GGG | - | chr8.4:30512327-30512346 | MS.gene23782:CDS | 40.0% | |
| GATATGCCGAAAACTTCAAC+AGG | - | chr8.4:30512568-30512587 | MS.gene23782:intron | 40.0% | |
| GATCATGGGAATCAATGGAA+GGG | - | chr8.4:30509969-30509988 | MS.gene23782:CDS | 40.0% | |
| TCATACATTGCAGGGACATT+AGG | + | chr8.4:30511227-30511246 | None:intergenic | 40.0% | |
| TGACTGAAGACAACTCCTTT+AGG | + | chr8.4:30511605-30511624 | None:intergenic | 40.0% | |
| TGCTAGACCTGATGATCTAT+GGG | - | chr8.4:30512423-30512442 | MS.gene23782:intron | 40.0% | |
| TTCACGCCTTGATGCAAATA+TGG | - | chr8.4:30511295-30511314 | MS.gene23782:intron | 40.0% | |
| TTGCTAGACCTGATGATCTA+TGG | - | chr8.4:30512422-30512441 | MS.gene23782:intron | 40.0% | |
| TTGCTTGTGAATGCTCCAAT+AGG | + | chr8.4:30511328-30511347 | None:intergenic | 40.0% | |
| ! | CACAAGGTATCAGTGATAAC+CGG | - | chr8.4:30511902-30511921 | MS.gene23782:intron | 40.0% |
| ! | GTTGGTGAGGTAATGTTTAG+AGG | - | chr8.4:30512175-30512194 | MS.gene23782:intron | 40.0% |
| ! | TAATGGTTGGTGCTTAGCTT+GGG | - | chr8.4:30511718-30511737 | MS.gene23782:intron | 40.0% |
| !! | GACAAGAGGTGTCAATTTCA+GGG | - | chr8.4:30509695-30509714 | MS.gene23782:CDS | 40.0% |
| !! | GGTGGTGATTGATTTTGCTA+GGG | - | chr8.4:30510999-30511018 | MS.gene23782:CDS | 40.0% |
| !! | TGACAAGAGGTGTCAATTTC+AGG | - | chr8.4:30509694-30509713 | MS.gene23782:CDS | 40.0% |
| !! | TGGTGGTGATTGATTTTGCT+AGG | - | chr8.4:30510998-30511017 | MS.gene23782:CDS | 40.0% |
| !! | TTCTTTTCGCTCTTTTGGCT+AGG | + | chr8.4:30511406-30511425 | None:intergenic | 40.0% |
| !!! | GTTTTAGGAGCCATGAAATG+CGG | + | chr8.4:30512535-30512554 | None:intergenic | 40.0% |
| AGATCGTTTGCCGCATTTCA+TGG | - | chr8.4:30512522-30512541 | MS.gene23782:intron | 45.0% | |
| AGGGATTTCTCGTGGAGATA+TGG | - | chr8.4:30510159-30510178 | MS.gene23782:CDS | 45.0% | |
| ATCATCGAAAGGATCTGTGG+CGG | + | chr8.4:30511941-30511960 | None:intergenic | 45.0% | |
| CAGCTCAATCGAGGTAGAAA+CGG | - | chr8.4:30512360-30512379 | MS.gene23782:CDS | 45.0% | |
| CGAAATCAAAGACCGGTTGA+AGG | - | chr8.4:30512309-30512328 | MS.gene23782:CDS | 45.0% | |
| CTTCTTCTCTCTCCCAGTTA+GGG | - | chr8.4:30510140-30510159 | MS.gene23782:CDS | 45.0% | |
| GCTAGACCTGATGATCTATG+GGG | - | chr8.4:30512424-30512443 | MS.gene23782:intron | 45.0% | |
| GGATCATGGGAATCAATGGA+AGG | - | chr8.4:30509968-30509987 | MS.gene23782:CDS | 45.0% | |
| TATGGCCTCACAGAAACATG+TGG | - | chr8.4:30511992-30512011 | MS.gene23782:intron | 45.0% | |
| TCACAGAAACATGTGGTGCA+GGG | - | chr8.4:30511999-30512018 | MS.gene23782:intron | 45.0% | |
| TCCACGAGAAATCCCTAACT+GGG | + | chr8.4:30510155-30510174 | None:intergenic | 45.0% | |
| TCCAGGATCATGGGAATCAA+TGG | - | chr8.4:30509964-30509983 | MS.gene23782:CDS | 45.0% | |
| TCCATCATCGAAAGGATCTG+TGG | + | chr8.4:30511944-30511963 | None:intergenic | 45.0% | |
| TGTTCCGGCTGATGGAAAAA+CGG | - | chr8.4:30512153-30512172 | MS.gene23782:intron | 45.0% | |
| ! | AAGGTATCAGTGATAACCGG+AGG | - | chr8.4:30511905-30511924 | MS.gene23782:intron | 45.0% |
| ! | AATGGTTGGTGCTTAGCTTG+GGG | - | chr8.4:30511719-30511738 | MS.gene23782:intron | 45.0% |
| ! | CGGCTTTCTTTTCGCTCTTT+TGG | + | chr8.4:30511411-30511430 | None:intergenic | 45.0% |
| ! | CTAATGGTTGGTGCTTAGCT+TGG | - | chr8.4:30511717-30511736 | MS.gene23782:intron | 45.0% |
| ! | CTTGCTGTGAAACACTCTGA+TGG | - | chr8.4:30512280-30512299 | MS.gene23782:CDS | 45.0% |
| ! | GCTCTCTCCAAGAAGTTGAT+AGG | + | chr8.4:30510031-30510050 | None:intergenic | 45.0% |
| ! | GGTATCAGAGCCTATCGATT+CGG | + | chr8.4:30510327-30510346 | None:intergenic | 45.0% |
| ! | TGATGGAAAAACGGTTGGTG+AGG | - | chr8.4:30512162-30512181 | MS.gene23782:intron | 45.0% |
| !! | GGTTTTGTATAGCCATCCAG+CGG | - | chr8.4:30512381-30512400 | MS.gene23782:CDS | 45.0% |
| !! | TCCATTGATTCCCATGATCC+TGG | + | chr8.4:30509968-30509987 | None:intergenic | 45.0% |
| !! | TTTTCGCTCTTTTGGCTAGG+AGG | + | chr8.4:30511403-30511422 | None:intergenic | 45.0% |
| !!! | TGTTTTGAGGGAGAAAGCCA+AGG | - | chr8.4:30512606-30512625 | MS.gene23782:intron | 45.0% |
| !!! | TTTTTTCAGGACGCTGTTCC+AGG | - | chr8.4:30509947-30509966 | MS.gene23782:CDS | 45.0% |
| AGAAATGCTTCCCAAGGCCT+TGG | + | chr8.4:30512626-30512645 | None:intergenic | 50.0% | |
| AGGCAAGGTGTACCACATGT+AGG | - | chr8.4:30512088-30512107 | MS.gene23782:intron | 50.0% | |
| AGGGACATTAGGTGCTAGTG+TGG | + | chr8.4:30511216-30511235 | None:intergenic | 50.0% | |
| AGGTGTACCACATGTAGGGT+TGG | - | chr8.4:30512093-30512112 | MS.gene23782:intron | 50.0% | |
| AGTGGCATCTCGAAACTGAG+CGG | + | chr8.4:30511052-30511071 | None:intergenic | 50.0% | |
| AGTTCCTCCAACCCTACATG+TGG | + | chr8.4:30512103-30512122 | None:intergenic | 50.0% | |
| ATGGATAGTGTTCCGGCTGA+TGG | - | chr8.4:30512145-30512164 | MS.gene23782:intron | 50.0% | |
| CAACTACTCGAAGTTGCTCG+AGG | - | chr8.4:30511368-30511387 | MS.gene23782:intron | 50.0% | |
| CATTTCGCAGTACCAATGGC+TGG | - | chr8.4:30511251-30511270 | MS.gene23782:intron | 50.0% | |
| CTCACAGAAACATGTGGTGC+AGG | - | chr8.4:30511998-30512017 | MS.gene23782:intron | 50.0% | |
| CTCCACGAGAAATCCCTAAC+TGG | + | chr8.4:30510156-30510175 | None:intergenic | 50.0% | |
| CTTCTTGGAGAGAGCAGCAA+AGG | - | chr8.4:30510036-30510055 | MS.gene23782:CDS | 50.0% | |
| GAAGACAACTCCTTTAGGCC+TGG | + | chr8.4:30511600-30511619 | None:intergenic | 50.0% | |
| GCACTGTGAACTGTGCTTGT+TGG | - | chr8.4:30511124-30511143 | MS.gene23782:CDS | 50.0% | |
| GCCACAGATCCTTTCGATGA+TGG | - | chr8.4:30511940-30511959 | MS.gene23782:intron | 50.0% | |
| GCTGCATTTCGCAGTACCAA+TGG | - | chr8.4:30511247-30511266 | MS.gene23782:intron | 50.0% | |
| GCTTCTTCTCTCTCCCAGTT+AGG | - | chr8.4:30510139-30510158 | MS.gene23782:CDS | 50.0% | |
| GGAGTTGTCTTCAGTCACAG+AGG | - | chr8.4:30511608-30511627 | MS.gene23782:intron | 50.0% | |
| GGCAAGGTGTACCACATGTA+GGG | - | chr8.4:30512089-30512108 | MS.gene23782:intron | 50.0% | |
| GTTTGGCCCCATAGATCATC+AGG | + | chr8.4:30512433-30512452 | None:intergenic | 50.0% | |
| TCCCAGTTAGGGATTTCTCG+TGG | - | chr8.4:30510151-30510170 | MS.gene23782:CDS | 50.0% | |
| TGTACCACATGTAGGGTTGG+AGG | - | chr8.4:30512096-30512115 | MS.gene23782:intron | 50.0% | |
| TTGTGCTTGGAGACCTGAGT+GGG | - | chr8.4:30512027-30512046 | MS.gene23782:intron | 50.0% | |
| TTTGTGCTTGGAGACCTGAG+TGG | - | chr8.4:30512026-30512045 | MS.gene23782:intron | 50.0% | |
| ! | CTGCACCACATGTTTCTGTG+AGG | + | chr8.4:30512000-30512019 | None:intergenic | 50.0% |
| ! | GTGCAGGGACTTTTTGTGCT+TGG | - | chr8.4:30512014-30512033 | MS.gene23782:intron | 50.0% |
| ! | GTTTGGTGGTCCGAATCGAT+AGG | - | chr8.4:30510314-30510333 | MS.gene23782:CDS | 50.0% |
| ! | TGAGCTGATGTTTTCTCCCC+CGG | + | chr8.4:30512347-30512366 | None:intergenic | 50.0% |
| !! | AAGGCCTTGGGAAGCATTTC+TGG | - | chr8.4:30512625-30512644 | MS.gene23782:intron | 50.0% |
| !! | CCAACCGTTTTTCCATCAGC+CGG | + | chr8.4:30512160-30512179 | None:intergenic | 50.0% |
| !! | GTTGGCTTTGATGCTCAGCA+AGG | - | chr8.4:30511142-30511161 | MS.gene23782:intron | 50.0% |
| AGGACGCTGTTCCAGGATCA+TGG | - | chr8.4:30509954-30509973 | MS.gene23782:CDS | 55.0% | |
| AGGGAGAAAGCCAAGGCCTT+GGG | - | chr8.4:30512613-30512632 | MS.gene23782:intron | 55.0% | |
| ATCGAAAGGATCTGTGGCGG+TGG | + | chr8.4:30511938-30511957 | None:intergenic | 55.0% | |
| CAGAGAATGGCTCCAGCCAT+TGG | + | chr8.4:30511266-30511285 | None:intergenic | 55.0% | |
| CCGGCTGATGGAAAAACGGT+TGG | - | chr8.4:30512157-30512176 | MS.gene23782:intron | 55.0% | |
| GGACGCTGTTCCAGGATCAT+GGG | - | chr8.4:30509955-30509974 | MS.gene23782:CDS | 55.0% | |
| GGAGGTAACATGTCCCACTC+AGG | + | chr8.4:30512043-30512062 | None:intergenic | 55.0% | |
| GGCACTACATCCAGGCCTAA+AGG | - | chr8.4:30511587-30511606 | MS.gene23782:intron | 55.0% | |
| GGGTCCAGAAATGCTTCCCA+AGG | + | chr8.4:30512632-30512651 | None:intergenic | 55.0% | |
| TAGCCATCCAGCGGTCTTAG+AGG | - | chr8.4:30512390-30512409 | MS.gene23782:intron | 55.0% | |
| ! | CGAAGTTGCTCGAGGAGCAT+TGG | - | chr8.4:30511376-30511395 | MS.gene23782:intron | 55.0% |
| ! | TTGGTGCTTAGCTTGGGGAG+TGG | - | chr8.4:30511724-30511743 | MS.gene23782:intron | 55.0% |
| ACACCTCGGGCACTACATCC+AGG | - | chr8.4:30511579-30511598 | MS.gene23782:intron | 60.0% | |
| GAAAGGATCTGTGGCGGTGG+AGG | + | chr8.4:30511935-30511954 | None:intergenic | 60.0% | |
| GAGGGAGAAAGCCAAGGCCT+TGG | - | chr8.4:30512612-30512631 | MS.gene23782:intron | 60.0% | |
| TCCAGCGGTCTTAGAGGCTG+CGG | - | chr8.4:30512396-30512415 | MS.gene23782:intron | 60.0% | |
| TGGGGAGTGGCAGCACAGTT+TGG | - | chr8.4:30511737-30511756 | MS.gene23782:intron | 60.0% | |
| !! | CAGCCTCTAAGACCGCTGGA+TGG | + | chr8.4:30512396-30512415 | None:intergenic | 60.0% |
| !! | GGGAAGCATTTCTGGACCCC+TGG | - | chr8.4:30512633-30512652 | MS.gene23782:intron | 60.0% |
| AGGCCTGGATGTAGTGCCCG+AGG | + | chr8.4:30511585-30511604 | None:intergenic | 65.0% | |
| !! | ACCGCAGCCTCTAAGACCGC+TGG | + | chr8.4:30512400-30512419 | None:intergenic | 65.0% |
| TGGCGGTGGAGGAGAGCCTC+CGG | + | chr8.4:30511924-30511943 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 30509678 | 30512684 | 30509678 | ID=MS.gene23782 |
| chr8.4 | mRNA | 30509678 | 30512684 | 30509678 | ID=MS.gene23782.t1;Parent=MS.gene23782 |
| chr8.4 | exon | 30512682 | 30512684 | 30512682 | ID=MS.gene23782.t1.exon1;Parent=MS.gene23782.t1 |
| chr8.4 | CDS | 30512682 | 30512684 | 30512682 | ID=cds.MS.gene23782.t1;Parent=MS.gene23782.t1 |
| chr8.4 | exon | 30512182 | 30512406 | 30512182 | ID=MS.gene23782.t1.exon2;Parent=MS.gene23782.t1 |
| chr8.4 | CDS | 30512182 | 30512406 | 30512182 | ID=cds.MS.gene23782.t1;Parent=MS.gene23782.t1 |
| chr8.4 | exon | 30509678 | 30511153 | 30509678 | ID=MS.gene23782.t1.exon3;Parent=MS.gene23782.t1 |
| chr8.4 | CDS | 30509678 | 30511153 | 30509678 | ID=cds.MS.gene23782.t1;Parent=MS.gene23782.t1 |
| Gene Sequence |
| Protein sequence |
