AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24852


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24852.t1 MTR_4g125810 97.466 513 13 0 1 513 1 513 0.0 1037
MS.gene24852.t1 MTR_2g040500 57.394 568 164 12 1 513 1 545 0.0 595
MS.gene24852.t1 MTR_3g104710 46.018 565 237 13 1 513 1 549 1.41e-152 447
MS.gene24852.t1 MTR_1g015110 46.057 558 251 12 1 513 1 553 3.80e-146 431
MS.gene24852.t1 MTR_8g102550 46.984 315 136 5 204 508 100 393 1.26e-87 275
MS.gene24852.t1 MTR_3g068200 43.014 365 151 9 160 504 49 376 1.40e-84 267
MS.gene24852.t1 MTR_5g080680 47.440 293 126 5 205 490 100 371 2.01e-74 241
MS.gene24852.t1 MTR_1g028300 46.224 331 136 8 182 508 92 384 1.42e-73 238
MS.gene24852.t1 MTR_5g009370 44.444 306 131 5 208 503 54 330 7.56e-71 229
MS.gene24852.t1 MTR_5g080680 47.059 204 81 4 205 401 100 283 2.19e-46 163
MS.gene24852.t1 MTR_5g071550 39.370 254 120 6 253 504 154 375 7.51e-45 162
MS.gene24852.t1 MTR_1g014640 37.748 302 123 10 207 501 78 321 9.71e-45 160
MS.gene24852.t1 MTR_1g013400 37.748 302 123 10 207 501 78 321 9.71e-45 160
MS.gene24852.t1 MTR_3g105730 38.079 302 122 11 207 501 35 278 1.75e-44 159
MS.gene24852.t1 MTR_3g105730 38.079 302 122 11 207 501 13 256 1.98e-44 158
MS.gene24852.t1 MTR_3g091060 36.242 298 131 6 208 501 96 338 8.54e-44 159
MS.gene24852.t1 MTR_1g115570 33.526 346 167 10 162 501 47 335 2.00e-43 157
MS.gene24852.t1 MTR_3g464650 34.219 301 146 7 208 504 63 315 3.08e-43 156
MS.gene24852.t1 MTR_3g464700 37.449 243 118 6 208 446 87 299 8.40e-41 150
MS.gene24852.t1 MTR_4g094208 35.599 309 129 11 207 505 30 278 3.94e-37 138
MS.gene24852.t1 MTR_5g071550 41.622 185 92 4 253 435 154 324 2.25e-35 135
MS.gene24852.t1 MTR_2g008850 37.308 260 118 8 250 504 16 235 2.12e-33 127
MS.gene24852.t1 MTR_1g050520 34.084 311 153 12 207 511 388 652 1.25e-32 132
MS.gene24852.t1 MTR_2g008850 36.923 260 119 7 250 504 62 281 2.54e-32 125
MS.gene24852.t1 MTR_3g105880 32.323 297 133 10 207 457 24 298 2.54e-31 123
MS.gene24852.t1 MTR_4g007440 32.867 286 122 10 207 445 24 286 3.78e-31 124
MS.gene24852.t1 MTR_3g105880 32.759 290 127 10 207 450 24 291 4.72e-31 124
MS.gene24852.t1 MTR_5g063940 36.434 258 123 7 250 504 16 235 5.25e-31 120
MS.gene24852.t1 MTR_8g463130 34.848 264 127 9 241 501 58 279 7.81e-31 121
MS.gene24852.t1 MTR_8g463130 34.848 264 127 9 241 501 30 251 8.42e-31 120
MS.gene24852.t1 MTR_3g074610 33.115 305 140 11 207 504 35 282 8.63e-31 121
MS.gene24852.t1 MTR_2g078760 35.273 275 130 9 238 504 20 254 8.68e-31 120
MS.gene24852.t1 MTR_1g014190 32.770 296 129 11 207 455 24 296 1.15e-30 122
MS.gene24852.t1 MTR_4g094542 37.945 253 113 8 253 501 150 362 1.37e-30 122
MS.gene24852.t1 MTR_2g078760 35.273 275 130 9 238 504 99 333 1.78e-30 121
MS.gene24852.t1 MTR_1g014190 32.468 308 137 12 207 467 62 345 2.06e-30 122
MS.gene24852.t1 MTR_5g063940 36.015 261 120 8 250 504 63 282 2.26e-30 120
MS.gene24852.t1 MTR_4g123080 31.295 278 155 9 241 509 100 350 1.36e-29 120
MS.gene24852.t1 MTR_4g123080 31.295 278 155 9 241 509 82 332 1.48e-29 119
MS.gene24852.t1 MTR_1g086350 30.508 295 164 10 225 506 86 352 3.00e-29 119
MS.gene24852.t1 MTR_1g086350 30.508 295 164 10 225 506 70 336 3.07e-29 119
MS.gene24852.t1 MTR_4g116420 28.758 306 158 11 214 505 93 352 1.15e-28 117
MS.gene24852.t1 MTR_2g033000 30.797 276 159 9 241 509 87 337 1.16e-28 117
MS.gene24852.t1 MTR_5g024340 30.916 262 135 9 248 501 120 343 1.01e-27 114
MS.gene24852.t1 MTR_3g107880 31.734 271 136 10 242 501 53 285 3.06e-27 112
MS.gene24852.t1 MTR_3g107880 30.258 271 140 8 242 501 111 343 5.80e-27 112
MS.gene24852.t1 MTR_3g107880 31.734 271 136 10 242 501 110 342 6.17e-27 112
MS.gene24852.t1 MTR_1g086350 31.061 264 145 8 252 506 15 250 1.84e-26 109
MS.gene24852.t1 MTR_2g078760 37.681 207 105 7 238 436 99 289 8.73e-24 101
MS.gene24852.t1 MTR_1g071370 32.609 230 97 7 324 507 225 442 3.15e-23 104
MS.gene24852.t1 MTR_7g029240 34.634 205 117 9 249 440 62 262 5.10e-23 101
MS.gene24852.t1 MTR_1g110210 29.392 296 153 10 220 503 46 297 1.02e-22 99.4
MS.gene24852.t1 MTR_3g491830 25.000 336 166 9 207 503 61 349 7.22e-22 97.8
MS.gene24852.t1 MTR_4g013295 33.761 234 120 8 253 451 78 311 1.15e-21 97.1
MS.gene24852.t1 MTR_3g105730 36.458 192 88 6 198 386 26 186 3.32e-21 92.8
MS.gene24852.t1 MTR_6g081850 30.942 223 121 8 248 448 71 282 5.74e-21 94.4
MS.gene24852.t1 MTR_1g016620 32.883 222 118 8 253 445 68 287 1.18e-20 93.6
MS.gene24852.t1 MTR_1g083690 34.389 221 117 9 253 445 89 309 1.34e-20 93.6
MS.gene24852.t1 MTR_1g112840 28.667 300 166 10 185 447 15 303 2.95e-20 93.2
MS.gene24852.t1 MTR_1g106855 30.932 236 121 8 249 448 57 286 7.16e-20 90.5
MS.gene24852.t1 MTR_7g100240 28.125 256 125 7 231 445 54 291 1.09e-19 91.3
MS.gene24852.t1 MTR_1g106855 30.932 236 121 8 249 448 57 286 1.10e-19 91.3
MS.gene24852.t1 MTR_4g120410 33.032 221 120 8 253 445 91 311 1.37e-19 90.9
MS.gene24852.t1 MTR_7g081020 30.472 233 122 7 249 447 72 298 1.55e-19 90.1
MS.gene24852.t1 MTR_7g070510 32.618 233 116 9 253 445 92 323 2.31e-19 90.9
MS.gene24852.t1 MTR_7g081020 30.472 233 122 7 249 447 72 298 2.62e-19 90.1
MS.gene24852.t1 MTR_3g101540 29.008 262 141 9 254 503 67 295 3.16e-19 90.5
MS.gene24852.t1 MTR_7g112490 32.174 230 119 9 253 445 91 320 3.42e-19 89.7
MS.gene24852.t1 MTR_3g101540 29.008 262 141 9 254 503 67 295 3.58e-19 90.1
MS.gene24852.t1 MTR_7g112490 32.174 230 119 9 253 445 109 338 5.07e-19 89.4
MS.gene24852.t1 MTR_1g019760 28.244 262 143 8 254 503 66 294 2.42e-18 87.8
MS.gene24852.t1 MTR_1g019760 28.244 262 143 8 254 503 66 294 3.33e-18 87.4
MS.gene24852.t1 MTR_7g090550 28.660 321 149 13 238 503 55 350 4.53e-18 87.0
MS.gene24852.t1 MTR_7g112430 28.996 269 144 8 249 503 62 297 5.85e-18 86.7
MS.gene24852.t1 MTR_3g032700 32.159 227 120 7 253 448 68 291 5.99e-18 86.7
MS.gene24852.t1 MTR_7g021530 30.833 240 119 7 253 445 38 277 6.43e-18 85.9
MS.gene24852.t1 MTR_1g116260 29.461 241 114 7 249 447 76 302 1.08e-17 85.5
MS.gene24852.t1 MTR_7g021530 30.833 240 119 7 253 445 88 327 1.27e-17 85.5
MS.gene24852.t1 MTR_1g067210 28.571 245 121 6 242 445 65 296 1.66e-17 84.7
MS.gene24852.t1 MTR_7g021530 31.667 240 117 8 253 445 129 368 2.15e-17 85.1
MS.gene24852.t1 MTR_7g090530 28.041 296 147 11 253 501 69 345 2.79e-17 84.7
MS.gene24852.t1 MTR_2g435550 31.963 219 121 8 255 445 94 312 3.07e-17 83.6
MS.gene24852.t1 MTR_3g032660 31.718 227 121 7 253 448 68 291 3.28e-17 84.3
MS.gene24852.t1 MTR_2g435550 31.963 219 121 8 255 445 80 298 3.67e-17 83.2
MS.gene24852.t1 MTR_2g435550 31.818 220 122 8 255 446 94 313 3.96e-17 83.6
MS.gene24852.t1 MTR_8g074930 28.755 233 126 6 249 447 75 301 1.79e-16 81.6
MS.gene24852.t1 MTR_1g083750 26.351 296 162 9 220 503 46 297 2.21e-16 81.6
MS.gene24852.t1 MTR_7g080170 32.243 214 105 8 305 478 76 289 2.64e-16 81.3
MS.gene24852.t1 MTR_4g094208 36.842 152 64 6 251 389 52 184 3.73e-16 77.8
MS.gene24852.t1 MTR_2g090190 27.897 233 128 7 253 445 90 322 3.82e-16 81.3
MS.gene24852.t1 MTR_7g080170 29.470 302 137 12 253 478 96 397 4.31e-16 81.3
MS.gene24852.t1 MTR_2g033910 27.778 234 130 5 249 448 71 299 5.22e-16 80.1
MS.gene24852.t1 MTR_5g071550 37.097 124 63 3 253 375 154 263 1.42e-15 77.8
MS.gene24852.t1 MTR_0015s0140 28.980 245 138 8 232 445 59 298 2.54e-15 78.2
MS.gene24852.t1 MTR_8g017240 33.182 220 119 7 251 445 84 300 4.55e-15 77.4
MS.gene24852.t1 MTR_4g113480 29.730 222 121 7 253 445 74 289 2.12e-13 73.2
MS.gene24852.t1 MTR_1g083750 27.826 230 128 6 286 503 2 205 3.97e-13 70.9
MS.gene24852.t1 MTR_7g060770 26.190 294 168 10 253 505 263 548 1.79e-12 70.1
MS.gene24852.t1 MTR_8g074930 31.056 161 77 4 321 447 29 189 2.05e-12 68.2
MS.gene24852.t1 MTR_7g021530 30.263 228 112 8 253 433 88 315 5.04e-12 67.4
MS.gene24852.t1 MTR_7g021530 30.263 228 112 8 253 433 129 356 7.65e-12 67.4
MS.gene24852.t1 MTR_4g123080 33.113 151 72 6 365 509 110 237 1.37e-11 65.5
MS.gene24852.t1 MTR_3g032590 34.194 155 71 5 325 448 143 297 2.56e-11 66.2
MS.gene24852.t1 MTR_2g078760 34.839 155 79 6 238 386 99 237 6.42e-11 63.5
MS.gene24852.t1 MTR_4g076560 27.197 239 129 7 241 442 191 421 7.45e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24852.t1 AT5G57050 59.659 352 125 8 169 513 80 421 4.83e-140 410
MS.gene24852.t1 AT5G57050 59.659 352 125 8 169 513 40 381 6.03e-140 409
MS.gene24852.t1 AT4G26080 61.728 324 115 3 192 512 114 431 1.15e-139 410
MS.gene24852.t1 AT1G72770 57.593 349 127 3 183 513 166 511 2.89e-136 404
MS.gene24852.t1 AT1G72770 57.593 349 127 3 183 513 166 511 2.89e-136 404
MS.gene24852.t1 AT1G72770 57.593 349 127 3 183 513 166 511 2.89e-136 404
MS.gene24852.t1 AT1G17550 56.286 350 131 3 183 513 165 511 5.24e-134 398
MS.gene24852.t1 AT1G17550 56.286 350 131 3 183 513 165 511 5.24e-134 398
MS.gene24852.t1 AT2G29380 42.037 383 167 13 140 504 16 361 1.00e-84 266
MS.gene24852.t1 AT5G57050 56.250 240 91 7 169 404 80 309 5.32e-82 258
MS.gene24852.t1 AT1G72770 53.814 236 91 2 183 400 166 401 1.57e-78 252
MS.gene24852.t1 AT1G72770 53.814 236 91 2 183 400 166 401 1.57e-78 252
MS.gene24852.t1 AT1G07430 41.520 342 140 6 205 508 119 438 5.27e-76 246
MS.gene24852.t1 AT5G51760 45.846 325 146 5 198 504 70 382 6.94e-75 241
MS.gene24852.t1 AT5G51760 45.846 325 146 5 198 504 100 412 1.39e-74 242
MS.gene24852.t1 AT3G11410 42.994 314 112 8 175 447 56 343 6.35e-73 237
MS.gene24852.t1 AT5G59220 43.574 319 135 6 148 447 51 343 1.36e-71 234
MS.gene24852.t1 AT5G59220 41.176 272 115 6 148 400 51 296 1.13e-49 173
MS.gene24852.t1 AT5G53140 36.242 298 137 7 208 504 103 348 2.67e-45 164
MS.gene24852.t1 AT5G53140 36.242 298 137 7 208 504 103 348 2.67e-45 164
MS.gene24852.t1 AT1G43900 36.066 305 129 10 207 504 124 369 8.86e-45 162
MS.gene24852.t1 AT4G31750 37.086 302 125 9 207 501 34 277 1.24e-44 159
MS.gene24852.t1 AT4G31750 37.086 302 125 9 207 501 34 277 1.24e-44 159
MS.gene24852.t1 AT4G31750 37.086 302 125 9 207 501 34 277 1.87e-44 159
MS.gene24852.t1 AT1G07160 37.458 299 140 7 208 503 122 376 2.67e-44 160
MS.gene24852.t1 AT5G10740 37.086 302 125 10 207 501 34 277 2.91e-44 160
MS.gene24852.t1 AT5G10740 37.086 302 125 10 207 501 34 277 2.91e-44 160
MS.gene24852.t1 AT2G30020 39.286 252 123 5 254 504 171 393 4.41e-44 160
MS.gene24852.t1 AT5G24940 36.656 311 132 11 198 501 25 277 1.77e-43 160
MS.gene24852.t1 AT1G67820 38.400 250 125 6 194 442 72 293 1.14e-41 154
MS.gene24852.t1 AT1G67820 38.400 250 125 6 194 442 108 329 3.15e-41 154
MS.gene24852.t1 AT2G40180 33.542 319 167 8 190 504 109 386 1.84e-40 150
MS.gene24852.t1 AT1G22280 34.091 308 139 12 207 504 34 287 1.03e-34 132
MS.gene24852.t1 AT1G22280 34.426 305 136 12 207 504 34 281 7.67e-33 127
MS.gene24852.t1 AT1G34750 35.385 260 123 7 250 504 63 282 2.95e-32 125
MS.gene24852.t1 AT1G34750 35.385 260 123 7 250 504 63 282 2.95e-32 125
MS.gene24852.t1 AT1G34750 35.385 260 123 7 250 504 63 282 2.95e-32 125
MS.gene24852.t1 AT1G78200 33.333 276 138 8 237 504 1 238 1.53e-31 122
MS.gene24852.t1 AT1G78200 33.333 276 138 8 237 504 1 238 1.53e-31 122
MS.gene24852.t1 AT4G31860 32.990 291 125 11 207 450 24 291 2.33e-31 123
MS.gene24852.t1 AT2G33700 32.296 257 129 6 253 501 123 342 2.60e-31 125
MS.gene24852.t1 AT1G78200 33.333 285 143 9 229 504 37 283 6.39e-31 121
MS.gene24852.t1 AT1G78200 33.333 285 143 9 229 504 37 283 6.39e-31 121
MS.gene24852.t1 AT1G78200 33.333 285 143 9 229 504 37 283 6.39e-31 121
MS.gene24852.t1 AT4G31860 32.990 291 125 11 207 450 24 291 9.00e-31 123
MS.gene24852.t1 AT3G17250 30.241 291 158 8 238 512 141 402 9.76e-31 124
MS.gene24852.t1 AT2G25620 31.046 306 151 10 214 504 97 357 1.45e-30 123
MS.gene24852.t1 AT2G25620 31.046 306 151 10 214 504 97 357 1.45e-30 123
MS.gene24852.t1 AT2G25070 31.959 291 128 11 207 450 24 291 3.98e-30 121
MS.gene24852.t1 AT2G25070 31.959 291 128 11 207 450 24 291 3.98e-30 121
MS.gene24852.t1 AT2G40860 32.268 313 153 12 208 511 296 558 6.24e-30 123
MS.gene24852.t1 AT3G51470 30.851 282 145 9 233 501 37 281 7.17e-30 119
MS.gene24852.t1 AT2G40860 32.268 313 153 12 208 511 394 656 7.89e-30 124
MS.gene24852.t1 AT3G51470 30.142 282 147 9 233 501 81 325 1.37e-29 119
MS.gene24852.t1 AT1G48040 33.712 264 138 9 253 506 116 352 4.37e-29 119
MS.gene24852.t1 AT3G15260 34.231 260 126 8 250 504 70 289 2.53e-28 114
MS.gene24852.t1 AT3G15260 34.231 260 126 8 250 504 70 289 2.53e-28 114
MS.gene24852.t1 AT4G31860 33.455 275 113 11 207 434 24 275 9.29e-28 112
MS.gene24852.t1 AT3G62260 31.907 257 141 7 253 501 27 257 1.08e-27 112
MS.gene24852.t1 AT2G34740 32.847 274 136 9 238 503 101 334 1.32e-27 113
MS.gene24852.t1 AT3G62260 30.314 287 156 8 233 501 87 347 2.00e-27 114
MS.gene24852.t1 AT3G62260 30.314 287 156 8 233 501 86 346 2.23e-27 114
MS.gene24852.t1 AT4G28400 29.773 309 162 10 210 503 14 282 2.27e-27 111
MS.gene24852.t1 AT4G28400 30.657 274 142 9 238 503 27 260 2.92e-27 110
MS.gene24852.t1 AT1G34750 36.816 201 104 6 250 445 63 245 1.30e-26 108
MS.gene24852.t1 AT4G08260 31.481 270 121 7 238 504 1 209 9.65e-26 105
MS.gene24852.t1 AT2G20630 30.515 272 141 9 238 501 45 276 1.66e-25 106
MS.gene24852.t1 AT3G16800 33.333 243 124 9 251 456 91 332 1.98e-25 107
MS.gene24852.t1 AT3G16800 33.333 243 124 9 251 456 91 332 1.98e-25 107
MS.gene24852.t1 AT3G16800 33.333 243 124 9 251 456 91 332 1.98e-25 107
MS.gene24852.t1 AT2G40860 32.540 252 134 10 208 450 394 618 4.84e-25 109
MS.gene24852.t1 AT2G20630 30.627 271 140 9 238 500 45 275 1.05e-24 104
MS.gene24852.t1 AT3G16800 33.193 238 121 9 256 456 1 237 3.26e-24 102
MS.gene24852.t1 AT3G16800 33.193 238 121 9 256 456 1 237 3.26e-24 102
MS.gene24852.t1 AT1G68410 30.405 296 150 10 220 503 51 302 1.96e-23 103
MS.gene24852.t1 AT1G68410 30.405 296 150 10 220 503 51 302 1.96e-23 103
MS.gene24852.t1 AT1G68410 30.405 296 150 10 220 503 51 302 1.96e-23 103
MS.gene24852.t1 AT1G68410 30.405 296 150 10 220 503 51 302 1.96e-23 103
MS.gene24852.t1 AT3G27140 30.116 259 100 3 253 511 19 196 7.11e-23 98.2
MS.gene24852.t1 AT5G26010 32.618 233 126 8 234 441 52 278 7.70e-23 99.8
MS.gene24852.t1 AT4G28400 30.165 242 138 8 210 436 14 239 7.75e-23 98.2
MS.gene24852.t1 AT2G34740 35.071 211 113 8 238 440 115 309 1.11e-22 99.4
MS.gene24852.t1 AT2G34740 34.597 211 114 7 238 440 97 291 1.21e-22 99.0
MS.gene24852.t1 AT5G01700 33.953 215 116 8 253 441 29 243 1.36e-21 96.3
MS.gene24852.t1 AT5G01700 33.953 215 116 8 253 441 78 292 2.42e-21 96.3
MS.gene24852.t1 AT1G09160 30.153 262 138 8 254 503 69 297 2.66e-21 96.7
MS.gene24852.t1 AT1G09160 30.153 262 138 8 254 503 69 297 2.66e-21 96.7
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 2.91e-21 97.4
MS.gene24852.t1 AT1G47380 29.110 292 156 10 229 508 46 298 6.04e-21 95.9
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 6.87e-21 97.1
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 9.36e-21 96.7
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 9.36e-21 96.7
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 9.48e-21 96.7
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 9.79e-21 96.7
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.04e-20 96.7
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.04e-20 96.7
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.04e-20 96.7
MS.gene24852.t1 AT3G63340 33.333 237 98 9 324 512 232 456 1.04e-20 96.7
MS.gene24852.t1 AT1G79630 30.651 261 113 8 253 445 28 288 2.37e-20 94.0
MS.gene24852.t1 AT1G79630 30.651 261 113 8 253 445 28 288 2.37e-20 94.0
MS.gene24852.t1 AT3G63320 32.456 228 96 8 324 505 84 299 2.50e-20 93.2
MS.gene24852.t1 AT4G38520 28.523 298 169 9 185 447 15 303 5.08e-20 92.8
MS.gene24852.t1 AT4G38520 28.523 298 169 9 185 447 15 303 5.08e-20 92.8
MS.gene24852.t1 AT3G63320 32.456 228 96 8 324 505 167 382 6.38e-20 92.4
MS.gene24852.t1 AT1G79630 30.651 261 113 8 253 445 98 358 8.17e-20 92.8
MS.gene24852.t1 AT1G79630 30.651 261 113 8 253 445 94 354 9.70e-20 92.8
MS.gene24852.t1 AT4G27800 26.190 336 162 10 207 503 60 348 2.18e-19 90.5
MS.gene24852.t1 AT4G32950 31.944 216 114 7 255 448 74 278 3.35e-19 89.0
MS.gene24852.t1 AT5G27930 32.883 222 120 8 253 445 92 313 3.54e-19 89.7
MS.gene24852.t1 AT5G27930 32.883 222 120 8 253 445 92 313 3.54e-19 89.7
MS.gene24852.t1 AT3G63340 40.123 162 80 7 356 512 340 489 5.27e-19 91.3
MS.gene24852.t1 AT5G02760 30.328 244 116 8 242 445 61 290 5.50e-19 89.0
MS.gene24852.t1 AT3G55050 28.179 291 138 9 204 445 36 304 2.52e-18 87.4
MS.gene24852.t1 AT3G55050 28.179 291 138 9 204 445 36 304 2.52e-18 87.4
MS.gene24852.t1 AT3G17090 31.278 227 116 7 253 445 84 304 2.55e-18 86.3
MS.gene24852.t1 AT3G12620 29.461 241 110 7 249 445 79 303 2.66e-18 87.4
MS.gene24852.t1 AT3G12620 29.461 241 110 7 249 445 79 303 2.66e-18 87.4
MS.gene24852.t1 AT3G17090 31.278 227 116 7 253 445 84 304 3.99e-18 86.7
MS.gene24852.t1 AT2G05050 29.880 251 96 7 254 504 20 190 4.09e-18 83.2
MS.gene24852.t1 AT3G05640 31.944 216 124 7 253 445 93 308 8.30e-18 85.5
MS.gene24852.t1 AT3G05640 31.944 216 124 7 253 445 93 308 8.30e-18 85.5
MS.gene24852.t1 AT3G05640 31.944 216 124 7 253 445 93 308 8.30e-18 85.5
MS.gene24852.t1 AT1G16220 29.583 240 119 8 255 445 97 335 8.42e-18 86.7
MS.gene24852.t1 AT1G79630 37.267 161 81 5 304 445 89 248 8.61e-18 85.9
MS.gene24852.t1 AT1G79630 37.267 161 81 5 304 445 89 248 8.61e-18 85.9
MS.gene24852.t1 AT1G79630 37.267 161 81 5 304 445 89 248 8.61e-18 85.9
MS.gene24852.t1 AT1G79630 37.267 161 81 5 304 445 89 248 8.61e-18 85.9
MS.gene24852.t1 AT5G06750 29.762 252 137 8 232 448 62 308 1.12e-17 85.5
MS.gene24852.t1 AT5G06750 29.762 252 137 8 232 448 62 308 1.12e-17 85.5
MS.gene24852.t1 AT4G03415 27.953 254 136 8 234 445 83 331 1.59e-17 85.5
MS.gene24852.t1 AT4G03415 27.953 254 136 8 234 445 83 331 1.59e-17 85.5
MS.gene24852.t1 AT4G03415 27.953 254 136 8 234 445 83 331 1.59e-17 85.5
MS.gene24852.t1 AT3G51370 28.571 231 129 6 249 447 75 301 3.29e-17 84.0
MS.gene24852.t1 AT3G51370 28.571 231 129 6 249 447 75 301 3.29e-17 84.0
MS.gene24852.t1 AT5G66080 29.362 235 122 7 249 447 78 304 4.67e-17 83.6
MS.gene24852.t1 AT2G40860 30.131 229 124 10 208 427 394 595 2.57e-16 82.4
MS.gene24852.t1 AT1G03590 28.205 234 129 6 251 445 88 321 5.64e-16 80.9
MS.gene24852.t1 AT4G27800 25.503 298 152 9 207 465 60 326 1.05e-15 78.6
MS.gene24852.t1 AT1G17545 35.461 141 46 5 229 364 78 178 1.97e-15 75.1
MS.gene24852.t1 AT5G36250 29.317 249 123 11 253 448 98 346 8.42e-15 77.0
MS.gene24852.t1 AT3G02750 35.000 160 85 6 305 445 193 352 1.07e-14 77.0
MS.gene24852.t1 AT3G02750 35.000 160 85 6 305 445 193 352 1.07e-14 77.0
MS.gene24852.t1 AT4G27800 25.000 292 149 9 207 459 60 320 1.16e-14 75.9
MS.gene24852.t1 AT5G27930 31.429 210 115 8 253 433 92 301 7.88e-14 73.2
MS.gene24852.t1 AT1G22280 32.275 189 90 9 207 390 34 189 4.93e-13 68.6
MS.gene24852.t1 AT3G51370 32.298 161 75 5 321 447 56 216 1.00e-12 69.3
MS.gene24852.t1 AT5G66080 30.909 165 76 5 319 447 38 200 6.96e-12 66.6
MS.gene24852.t1 AT5G06750 31.447 159 74 4 325 448 68 226 8.03e-12 66.6
MS.gene24852.t1 AT5G36250 27.757 263 123 12 253 448 98 360 1.15e-11 67.4
MS.gene24852.t1 AT3G16560 26.295 251 118 11 253 442 175 419 3.50e-11 65.9
MS.gene24852.t1 AT3G16560 26.295 251 118 11 253 442 175 419 3.55e-11 65.9
MS.gene24852.t1 AT3G16560 26.295 251 118 11 253 442 175 419 3.55e-11 65.9
MS.gene24852.t1 AT3G16560 26.295 251 118 11 253 442 175 419 3.55e-11 65.9

Find 121 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAATTGTGATAGATTTAA+AGG 0.171059 8.1:+6291535 MS.gene24852:CDS
TGATGGGCATGGAGGCTTTC+AGG 0.182963 8.1:+6289969 MS.gene24852:CDS
ATCAAATTTCCAAGTGTAAA+TGG 0.209870 8.1:-6289229 None:intergenic
GAAACAATTGGCAGGAAAAT+TGG 0.260091 8.1:+6290159 MS.gene24852:CDS
CAAGGAAGCGAATCCTTCTT+TGG 0.267654 8.1:+6291381 MS.gene24852:CDS
AACCATCACTTGCTAAAATA+AGG 0.282020 8.1:-6291319 None:intergenic
TGATTGAATGTGGGAGTAAT+TGG 0.283028 8.1:+6289446 MS.gene24852:CDS
TATGTGGGTTTGATTTAAAA+TGG 0.290272 8.1:-6290270 None:intergenic
TTTCAGTGCCTGCATAATTC+AGG 0.301475 8.1:+6289529 MS.gene24852:CDS
CTTTGCACAATATTGACTTC+TGG 0.302547 8.1:-6291278 None:intergenic
TACTCAATTCCAAACCATTC+TGG 0.307215 8.1:-6289783 None:intergenic
AATTGAGTAGTGGCCCTCTA+TGG 0.315879 8.1:+6289797 MS.gene24852:CDS
CGTCCTTTATAGCCTGGTTA+TGG 0.318628 8.1:-6289483 None:intergenic
CTTCTTTGGCACAAGAAGTA+TGG 0.323327 8.1:+6291395 MS.gene24852:CDS
TGAAGCTCGGCAGTCAAGTT+TGG 0.330887 8.1:+6290121 MS.gene24852:CDS
AGAAGAATAGCAGATAGTTT+TGG 0.339478 8.1:-6289718 None:intergenic
TTTAGCAAGTGATGGTTTAT+GGG 0.343067 8.1:+6291325 MS.gene24852:CDS
TGGAAAGGATACAGAGTTCT+TGG 0.348321 8.1:+6290520 MS.gene24852:CDS
GATAACCGGGTTGAAGCTTA+TGG 0.383742 8.1:+6289285 MS.gene24852:CDS
CACATAATTGTTGCAAATTG+TGG 0.384733 8.1:+6290287 MS.gene24852:CDS
CACGGTATCCGCGGAGGTAA+AGG 0.384992 8.1:+6289387 MS.gene24852:CDS
TAGCATAAACGAGGTACTTC+CGG 0.395663 8.1:+6289615 MS.gene24852:CDS
CACAATTTGCAACAATTATG+TGG 0.398808 8.1:-6290286 None:intergenic
ACAACTCATATGGAGATAAC+CGG 0.401599 8.1:+6289271 MS.gene24852:CDS
ATTGAGTAGTGGCCCTCTAT+GGG 0.404588 8.1:+6289798 MS.gene24852:CDS
ACTTGGAAATTTGATTCAAA+AGG 0.416275 8.1:+6289237 MS.gene24852:CDS
ACATAATTGTTGCAAATTGT+GGG 0.422260 8.1:+6290288 MS.gene24852:CDS
AAGCCATAACCAGGCTATAA+AGG 0.423467 8.1:+6289480 MS.gene24852:CDS
TTGATATTAAATCCTGCAGT+TGG 0.427928 8.1:+6289325 MS.gene24852:CDS
GCAGTGGAGCCAGCAGTCTC+AGG 0.434389 8.1:-6290239 None:intergenic
TCACCAACCGTGACGATGAT+TGG 0.437340 8.1:-6289574 None:intergenic
CGAGGTACTTCCGGCACTAA+AGG 0.437574 8.1:+6289624 MS.gene24852:CDS
CTTGAAGATATTTCTTCCAT+TGG 0.442941 8.1:-6289196 None:intergenic
TTCTGCTCGGCCTTTAGTGC+CGG 0.446492 8.1:-6289634 None:intergenic
TGCTGCTGTTACAACTCATA+TGG 0.453647 8.1:+6289261 MS.gene24852:CDS
ATACAGAGTTCTTGGTGTCT+TGG 0.453913 8.1:+6290528 MS.gene24852:CDS
AACAAGCAACCAGAATGGTT+TGG 0.455011 8.1:+6289774 MS.gene24852:CDS
ACAATATTGACTTCTGGTTC+TGG 0.455106 8.1:-6291272 None:intergenic
AGTCCCTTCACAGATGCTAA+TGG 0.459379 8.1:+6289891 MS.gene24852:CDS
TCTGGTTCTGGAATTATCCA+TGG 0.460881 8.1:-6291260 None:intergenic
CTCGCCCTCCACAGAGGAAG+CGG 0.461339 8.1:+6291500 MS.gene24852:CDS
CATACTTCTTGTGCCAAAGA+AGG 0.465903 8.1:-6291394 None:intergenic
TCAAGTTTGGATGAAGCAAA+TGG 0.471498 8.1:+6290134 MS.gene24852:CDS
AAGCAAATGGGAGAAACAAT+TGG 0.477000 8.1:+6290147 MS.gene24852:CDS
TCTCATCGTCCTTTATAGCC+TGG 0.499525 8.1:-6289489 None:intergenic
TTGGTGTCTTGGCCATGTCA+AGG 0.499546 8.1:+6290539 MS.gene24852:CDS
GCCCTCTCATCCTCTCGATT+CGG 0.503961 8.1:-6290463 None:intergenic
TTGCAAATTGTGGGGATTCG+AGG 0.505415 8.1:+6290297 MS.gene24852:CDS
ACTAAAGGCCGAGCAGAATA+CGG 0.508870 8.1:+6289639 MS.gene24852:CDS
CTGTGGAAATAGACCGGAGA+TGG 0.511631 8.1:+6289834 MS.gene24852:CDS
AGTTGGTGCGTCTGTTGTCT+CGG 0.520037 8.1:+6289417 MS.gene24852:CDS
CAAGTTTGGATGAAGCAAAT+GGG 0.522079 8.1:+6290135 MS.gene24852:CDS
ACGGTTGGTGATGAGATTCA+TGG 0.523608 8.1:+6289586 MS.gene24852:CDS
GCAACGGCATCTTCCATCTC+CGG 0.523778 8.1:-6289847 None:intergenic
ATCAATCTGTGGAAATAGAC+CGG 0.533852 8.1:+6289828 MS.gene24852:CDS
ACTATTGCTCCTGAGACTGC+TGG 0.535769 8.1:+6290230 MS.gene24852:CDS
TTTGGTGTCTATGATGGGCA+TGG 0.536239 8.1:+6289958 MS.gene24852:CDS
TCGAGGGCTGTCTTGTATCG+TGG 0.542408 8.1:+6290314 MS.gene24852:CDS
CGAGGGCTGTCTTGTATCGT+GGG 0.543022 8.1:+6290315 MS.gene24852:CDS
TTGGCCATGTCAAGGTCCAT+AGG 0.543817 8.1:+6290547 MS.gene24852:CDS
TGCAAATTGTGGGGATTCGA+GGG 0.545554 8.1:+6290298 MS.gene24852:CDS
TTGAGAACAAGCAACCAGAA+TGG 0.553751 8.1:+6289769 MS.gene24852:CDS
AGGGCAAGAATCGAAGCAGC+AGG 0.556886 8.1:+6290481 MS.gene24852:CDS
ACAATTTGCAACAATTATGT+GGG 0.558102 8.1:-6290285 None:intergenic
TGTTGCAATGGATATTGAGA+GGG 0.559364 8.1:+6289666 MS.gene24852:CDS
ATTGAGAGCCTGAATTATGC+AGG 0.559602 8.1:-6289537 None:intergenic
TCTTCTTGATCAGTTGCCAA+AGG 0.560115 8.1:+6289735 MS.gene24852:CDS
CTGTTGCAATGGATATTGAG+AGG 0.561722 8.1:+6289665 MS.gene24852:CDS
AAATGGGAGAAACAATTGGC+AGG 0.562122 8.1:+6290151 MS.gene24852:CDS
CATAATTGTTGCAAATTGTG+GGG 0.563435 8.1:+6290289 MS.gene24852:CDS
AAGAAGCATGTGATATTGCA+AGG 0.565187 8.1:+6291363 MS.gene24852:CDS
GACTGCTGGCTCCACTGCAG+TGG 0.569359 8.1:+6290244 MS.gene24852:CDS
GAATACGGTTTCTGTTGCAA+TGG 0.570314 8.1:+6289654 MS.gene24852:CDS
GTTGCAGTGCCATTTACACT+TGG 0.572388 8.1:+6289220 MS.gene24852:CDS
GAGGTAAAGGAGAATCAAGT+TGG 0.572537 8.1:+6289400 MS.gene24852:CDS
AACAGAAACCGTATTCTGCT+CGG 0.575565 8.1:-6289647 None:intergenic
TCTACACTCAGCGTTGATTG+AGG 0.579519 8.1:+6290094 MS.gene24852:CDS
TTGATGAGAAACCCCATAGA+GGG 0.580491 8.1:-6289810 None:intergenic
GCCGAATCGAGAGGATGAGA+GGG 0.580620 8.1:+6290462 MS.gene24852:intron
CAGGAGGAAGAGTCATACAT+TGG 0.580820 8.1:+6290500 MS.gene24852:CDS
CTTGAGTGAAAGCCATAACC+AGG 0.583606 8.1:+6289471 MS.gene24852:CDS
ATCGCCGCTTCCTCTGTGGA+GGG 0.585497 8.1:-6291504 None:intergenic
ATTGATGAGAAACCCCATAG+AGG 0.590904 8.1:-6289811 None:intergenic
AAATCGAAGCGTGTCAGAAG+AGG 0.592137 8.1:+6289690 MS.gene24852:CDS
GTGATAGATACTTGAAACCA+TGG 0.595760 8.1:+6291243 MS.gene24852:CDS
TAAAATGGCAACCACTGCAG+TGG 0.596316 8.1:-6290255 None:intergenic
CATACCTATGGACCTTGACA+TGG 0.597500 8.1:-6290551 None:intergenic
TCGGAAATGTTGATTGAATG+TGG 0.599725 8.1:+6289436 MS.gene24852:CDS
TATCGCCGCTTCCTCTGTGG+AGG 0.600276 8.1:-6291505 None:intergenic
CGATGAGATCATGTTAGCTG+TGG 0.601298 8.1:+6289504 MS.gene24852:CDS
AGCCGAATCGAGAGGATGAG+AGG 0.601648 8.1:+6290461 MS.gene24852:intron
TGTTATCGCCGCTTCCTCTG+TGG 0.606503 8.1:-6291508 None:intergenic
CAACTCATATGGAGATAACC+GGG 0.606916 8.1:+6289272 MS.gene24852:CDS
GTGGTCAGAAGACAACGCTA+TGG 0.607535 8.1:-6290345 None:intergenic
ACAGTACTTGACAAAGGAGA+AGG 0.608657 8.1:+6291431 MS.gene24852:CDS
TTGAGTAGTGGCCCTCTATG+GGG 0.609354 8.1:+6289799 MS.gene24852:CDS
TCATCCATTAGCATCTGTGA+AGG 0.613517 8.1:-6289895 None:intergenic
TCACCAATCATCGTCACGGT+TGG 0.616215 8.1:+6289571 MS.gene24852:CDS
GGAAGAGTCATACATTGGAA+AGG 0.617081 8.1:+6290505 MS.gene24852:CDS
TGGGGTTTCTCATCAATCTG+TGG 0.622774 8.1:+6289817 MS.gene24852:CDS
CATCCATTAGCATCTGTGAA+GGG 0.623872 8.1:-6289894 None:intergenic
TAATTCAGGCTCTCAATCTG+TGG 0.624297 8.1:+6289543 MS.gene24852:CDS
AATGGTTTGGAATTGAGTAG+TGG 0.634780 8.1:+6289787 MS.gene24852:CDS
CGGAAATGTTGATTGAATGT+GGG 0.636981 8.1:+6289437 MS.gene24852:CDS
GTACTTGACAAAGGAGAAGG+AGG 0.638743 8.1:+6291434 MS.gene24852:CDS
GCAAGAATCGAAGCAGCAGG+AGG 0.645246 8.1:+6290484 MS.gene24852:CDS
GTTGAAGACTAACATCAGCA+TGG 0.646810 8.1:-6289357 None:intergenic
TCAGATCACGGTATCCGCGG+AGG 0.649352 8.1:+6289381 MS.gene24852:CDS
TGATTGAGGAGATTGAAGCT+CGG 0.650060 8.1:+6290108 MS.gene24852:CDS
ATTTGCCATAAGCTTCAACC+CGG 0.654249 8.1:-6289290 None:intergenic
CACAAGAAGTATGGTGACAA+CGG 0.654302 8.1:+6291404 MS.gene24852:CDS
ACATCAGATCACGGTATCCG+CGG 0.656186 8.1:+6289378 MS.gene24852:CDS
AGATTCACCAATCATCGTCA+CGG 0.661305 8.1:+6289567 MS.gene24852:CDS
AAGCTGAGGTTTGACAGCAA+CGG 0.668756 8.1:-6289863 None:intergenic
TAGTCTTCAACATCAGATCA+CGG 0.669945 8.1:+6289369 MS.gene24852:CDS
TTGATTCTCCTTTACCTCCG+CGG 0.675182 8.1:-6289395 None:intergenic
GGTGTCTATGATGGGCATGG+AGG 0.675725 8.1:+6289961 MS.gene24852:CDS
GGAGCAACAGTACTTGACAA+AGG 0.702207 8.1:+6291425 MS.gene24852:CDS
TCTAAACTCGCCCTCCACAG+AGG 0.709645 8.1:+6291494 MS.gene24852:CDS
TGGTAAGTTTAGCATAAACG+AGG 0.709809 8.1:+6289606 MS.gene24852:CDS
GAGTTTAGATAGATACTCTG+CGG 0.743383 8.1:-6291480 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAGTTTTAAGAAAGAA+AGG + chr8.1:6290755-6290774 MS.gene24852:intron 15.0%
!! AAAAATATTATAGTGCATCA+TGG + chr8.1:6291043-6291062 MS.gene24852:intron 20.0%
!! ATTAATCTCAATTACTGATA+TGG - chr8.1:6291198-6291217 None:intergenic 20.0%
!! CAAATTGTATGATTTGATTA+AGG - chr8.1:6290001-6290020 None:intergenic 20.0%
!! TGTAATTGTGATAGATTTAA+AGG + chr8.1:6291535-6291554 MS.gene24852:CDS 20.0%
!! TTAATCTCAATTACTGATAT+GGG - chr8.1:6291197-6291216 None:intergenic 20.0%
!!! ACAATTGTTAGTTTATTGAT+AGG + chr8.1:6290793-6290812 MS.gene24852:intron 20.0%
!!! ATTTTGTGTTTTCATTCAAA+TGG - chr8.1:6289921-6289940 None:intergenic 20.0%
! AAAGAATATATCCTATCCAA+AGG - chr8.1:6290913-6290932 None:intergenic 25.0%
! AACAAGTTTATGATATCCAA+AGG - chr8.1:6291124-6291143 None:intergenic 25.0%
! ACAATTTGCAACAATTATGT+GGG - chr8.1:6290288-6290307 None:intergenic 25.0%
! ACATAATTGTTGCAAATTGT+GGG + chr8.1:6290288-6290307 MS.gene24852:CDS 25.0%
! ACTTGGAAATTTGATTCAAA+AGG + chr8.1:6289237-6289256 MS.gene24852:CDS 25.0%
! AGTTTCCTTTATTCAGAAAA+TGG + chr8.1:6291068-6291087 MS.gene24852:intron 25.0%
! ATCAAATTTCCAAGTGTAAA+TGG - chr8.1:6289232-6289251 None:intergenic 25.0%
! TAATCTCAATTACTGATATG+GGG - chr8.1:6291196-6291215 None:intergenic 25.0%
! TCTATTCAGTTTGGTATTAA+GGG + chr8.1:6290630-6290649 MS.gene24852:intron 25.0%
!! AATTGTTTTCAGAAAGTAGA+TGG + chr8.1:6290197-6290216 MS.gene24852:CDS 25.0%
!! TATGTGGGTTTGATTTAAAA+TGG - chr8.1:6290273-6290292 None:intergenic 25.0%
!! TTCTTTTAATCAGTATCTCA+AGG + chr8.1:6290830-6290849 MS.gene24852:intron 25.0%
!! TTTTTCTGTTCCAAAGTTAT+GGG - chr8.1:6290857-6290876 None:intergenic 25.0%
!!! ATTTTTTTGGTGTCTATGAT+GGG + chr8.1:6289953-6289972 MS.gene24852:CDS 25.0%
!!! TTAAGCCATTTTCTGAATAA+AGG - chr8.1:6291076-6291095 None:intergenic 25.0%
AGTTTATTGATAGGAATTCG+TGG + chr8.1:6290802-6290821 MS.gene24852:intron 30.0%
CACAATTTGCAACAATTATG+TGG - chr8.1:6290289-6290308 None:intergenic 30.0%
CACATAATTGTTGCAAATTG+TGG + chr8.1:6290287-6290306 MS.gene24852:CDS 30.0%
CATAATTGTTGCAAATTGTG+GGG + chr8.1:6290289-6290308 MS.gene24852:CDS 30.0%
CATCATAGACACCAAAAAAA+TGG - chr8.1:6289954-6289973 None:intergenic 30.0%
CTATTCAGTTTGGTATTAAG+GGG + chr8.1:6290631-6290650 MS.gene24852:intron 30.0%
CTCTATTCAGTTTGGTATTA+AGG + chr8.1:6290629-6290648 MS.gene24852:intron 30.0%
TTGATATTAAATCCTGCAGT+TGG + chr8.1:6289325-6289344 MS.gene24852:CDS 30.0%
TTTAGCAAGTGATGGTTTAT+GGG + chr8.1:6291325-6291344 MS.gene24852:CDS 30.0%
! AACCATCACTTGCTAAAATA+AGG - chr8.1:6291322-6291341 None:intergenic 30.0%
! AGAAGAATAGCAGATAGTTT+TGG - chr8.1:6289721-6289740 None:intergenic 30.0%
! CTTTTTCTGTTCCAAAGTTA+TGG - chr8.1:6290858-6290877 None:intergenic 30.0%
! TCTTATTGTCTTGTTCAAAC+AGG + chr8.1:6291221-6291240 MS.gene24852:intron 30.0%
! TTTTAGCAAGTGATGGTTTA+TGG + chr8.1:6291324-6291343 MS.gene24852:CDS 30.0%
!! TGCAGTTTTTAACTCAAACA+AGG - chr8.1:6291164-6291183 None:intergenic 30.0%
!!! CAAACGTTTTTTGCTGAATA+GGG + chr8.1:6290678-6290697 MS.gene24852:intron 30.0%
!!! CATTTTTTTGGTGTCTATGA+TGG + chr8.1:6289952-6289971 MS.gene24852:CDS 30.0%
!!! TATCCACAAGTCCATTTTTT+TGG + chr8.1:6289940-6289959 MS.gene24852:CDS 30.0%
!!! TCAAACGTTTTTTGCTGAAT+AGG + chr8.1:6290677-6290696 MS.gene24852:intron 30.0%
AAAGGCTGAAATCACATTCA+AGG - chr8.1:6290895-6290914 None:intergenic 35.0%
AAGCAAATGGGAGAAACAAT+TGG + chr8.1:6290147-6290166 MS.gene24852:CDS 35.0%
ACAACTCATATGGAGATAAC+CGG + chr8.1:6289271-6289290 MS.gene24852:CDS 35.0%
ATCAATCTGTGGAAATAGAC+CGG + chr8.1:6289828-6289847 MS.gene24852:CDS 35.0%
ATGCAACAGATACATACCTA+TGG - chr8.1:6290566-6290585 None:intergenic 35.0%
CAAGTTTGGATGAAGCAAAT+GGG + chr8.1:6290135-6290154 MS.gene24852:CDS 35.0%
CTATGAAATGCCTTACTTTG+TGG - chr8.1:6290367-6290386 None:intergenic 35.0%
GAAACAATTGGCAGGAAAAT+TGG + chr8.1:6290159-6290178 MS.gene24852:CDS 35.0%
GAGTTTAGATAGATACTCTG+CGG - chr8.1:6291483-6291502 None:intergenic 35.0%
GCATGTTACTCTATTCAGTT+TGG + chr8.1:6290621-6290640 MS.gene24852:intron 35.0%
GTATGTATCTGTTGCATGAT+TGG + chr8.1:6290569-6290588 MS.gene24852:intron 35.0%
GTGATAGATACTTGAAACCA+TGG + chr8.1:6291243-6291262 MS.gene24852:CDS 35.0%
TACTCAATTCCAAACCATTC+TGG - chr8.1:6289786-6289805 None:intergenic 35.0%
TAGTCTTCAACATCAGATCA+CGG + chr8.1:6289369-6289388 MS.gene24852:CDS 35.0%
TCAAGTTTGGATGAAGCAAA+TGG + chr8.1:6290134-6290153 MS.gene24852:CDS 35.0%
TGATTGAATGTGGGAGTAAT+TGG + chr8.1:6289446-6289465 MS.gene24852:CDS 35.0%
TGGTAAGTTTAGCATAAACG+AGG + chr8.1:6289606-6289625 MS.gene24852:CDS 35.0%
TGTTGCAATGGATATTGAGA+GGG + chr8.1:6289666-6289685 MS.gene24852:CDS 35.0%
TTGAATGTGATTTCAGCCTT+TGG + chr8.1:6290894-6290913 MS.gene24852:intron 35.0%
! AAGAAGCATGTGATATTGCA+AGG + chr8.1:6291363-6291382 MS.gene24852:CDS 35.0%
! AATGGTTTGGAATTGAGTAG+TGG + chr8.1:6289787-6289806 MS.gene24852:CDS 35.0%
! ACACCAAAAAAATGGACTTG+TGG - chr8.1:6289946-6289965 None:intergenic 35.0%
! CGGAAATGTTGATTGAATGT+GGG + chr8.1:6289437-6289456 MS.gene24852:CDS 35.0%
! TCGGAAATGTTGATTGAATG+TGG + chr8.1:6289436-6289455 MS.gene24852:CDS 35.0%
!! ACAATATTGACTTCTGGTTC+TGG - chr8.1:6291275-6291294 None:intergenic 35.0%
!! CTCAATGTTTTGTTCTCCTT+TGG - chr8.1:6289754-6289773 None:intergenic 35.0%
!! CTTTGCACAATATTGACTTC+TGG - chr8.1:6291281-6291300 None:intergenic 35.0%
!!! GAGAGTGTTTTGTTTCTGAT+AGG + chr8.1:6290049-6290068 MS.gene24852:intron 35.0%
!!! TGCCTTATTTTAGCAAGTGA+TGG + chr8.1:6291317-6291336 MS.gene24852:CDS 35.0%
AAATGGGAGAAACAATTGGC+AGG + chr8.1:6290151-6290170 MS.gene24852:CDS 40.0%
AACAAGCAACCAGAATGGTT+TGG + chr8.1:6289774-6289793 MS.gene24852:CDS 40.0%
AACAGAAACCGTATTCTGCT+CGG - chr8.1:6289650-6289669 None:intergenic 40.0%
AAGCCATAACCAGGCTATAA+AGG + chr8.1:6289480-6289499 MS.gene24852:CDS 40.0%
ACAGTACTTGACAAAGGAGA+AGG + chr8.1:6291431-6291450 MS.gene24852:CDS 40.0%
AGATTCACCAATCATCGTCA+CGG + chr8.1:6289567-6289586 MS.gene24852:CDS 40.0%
ATCTCAAGGACCCATAACTT+TGG + chr8.1:6290844-6290863 MS.gene24852:intron 40.0%
ATTATGTCAGACGCTGAAGT+TGG + chr8.1:6290408-6290427 MS.gene24852:intron 40.0%
ATTGAGAGCCTGAATTATGC+AGG - chr8.1:6289540-6289559 None:intergenic 40.0%
ATTGATGAGAAACCCCATAG+AGG - chr8.1:6289814-6289833 None:intergenic 40.0%
ATTTGCCATAAGCTTCAACC+CGG - chr8.1:6289293-6289312 None:intergenic 40.0%
CAACTCATATGGAGATAACC+GGG + chr8.1:6289272-6289291 MS.gene24852:CDS 40.0%
CATACTTCTTGTGCCAAAGA+AGG - chr8.1:6291397-6291416 None:intergenic 40.0%
CATCCATTAGCATCTGTGAA+GGG - chr8.1:6289897-6289916 None:intergenic 40.0%
CTGTTGCAATGGATATTGAG+AGG + chr8.1:6289665-6289684 MS.gene24852:CDS 40.0%
CTTCTTTGGCACAAGAAGTA+TGG + chr8.1:6291395-6291414 MS.gene24852:CDS 40.0%
GAATACGGTTTCTGTTGCAA+TGG + chr8.1:6289654-6289673 MS.gene24852:CDS 40.0%
GAGGTAAAGGAGAATCAAGT+TGG + chr8.1:6289400-6289419 MS.gene24852:CDS 40.0%
GGAAGAGTCATACATTGGAA+AGG + chr8.1:6290505-6290524 MS.gene24852:CDS 40.0%
GTTGAAGACTAACATCAGCA+TGG - chr8.1:6289360-6289379 None:intergenic 40.0%
TAATTCAGGCTCTCAATCTG+TGG + chr8.1:6289543-6289562 MS.gene24852:CDS 40.0%
TCATCCATTAGCATCTGTGA+AGG - chr8.1:6289898-6289917 None:intergenic 40.0%
TCTTCTTGATCAGTTGCCAA+AGG + chr8.1:6289735-6289754 MS.gene24852:CDS 40.0%
TGATTGAGGAGATTGAAGCT+CGG + chr8.1:6290108-6290127 MS.gene24852:CDS 40.0%
TGCTGCTGTTACAACTCATA+TGG + chr8.1:6289261-6289280 MS.gene24852:CDS 40.0%
TGGAAAGGATACAGAGTTCT+TGG + chr8.1:6290520-6290539 MS.gene24852:CDS 40.0%
TGTCTTCTGACCACAAAGTA+AGG + chr8.1:6290354-6290373 MS.gene24852:intron 40.0%
TGTGATTTCAGCCTTTGGAT+AGG + chr8.1:6290899-6290918 MS.gene24852:intron 40.0%
TTGAGAACAAGCAACCAGAA+TGG + chr8.1:6289769-6289788 MS.gene24852:CDS 40.0%
TTGATGAGAAACCCCATAGA+GGG - chr8.1:6289813-6289832 None:intergenic 40.0%
TTTCAGTGCCTGCATAATTC+AGG + chr8.1:6289529-6289548 MS.gene24852:CDS 40.0%
! CACAAGAAGTATGGTGACAA+CGG + chr8.1:6291404-6291423 MS.gene24852:CDS 40.0%
! TAGCATAAACGAGGTACTTC+CGG + chr8.1:6289615-6289634 MS.gene24852:CDS 40.0%
! TGGTTTTCATTTCCAACTGC+AGG - chr8.1:6289340-6289359 None:intergenic 40.0%
! TTTTTGCTGAATAGGGACAC+AGG + chr8.1:6290685-6290704 MS.gene24852:intron 40.0%
!! ATACAGAGTTCTTGGTGTCT+TGG + chr8.1:6290528-6290547 MS.gene24852:CDS 40.0%
!! TCTGGTTCTGGAATTATCCA+TGG - chr8.1:6291263-6291282 None:intergenic 40.0%
AAATCGAAGCGTGTCAGAAG+AGG + chr8.1:6289690-6289709 MS.gene24852:CDS 45.0%
AAGCTGAGGTTTGACAGCAA+CGG - chr8.1:6289866-6289885 None:intergenic 45.0%
AATTGAGTAGTGGCCCTCTA+TGG + chr8.1:6289797-6289816 MS.gene24852:CDS 45.0%
ACTAAAGGCCGAGCAGAATA+CGG + chr8.1:6289639-6289658 MS.gene24852:CDS 45.0%
AGTCCCTTCACAGATGCTAA+TGG + chr8.1:6289891-6289910 MS.gene24852:CDS 45.0%
ATTGAGTAGTGGCCCTCTAT+GGG + chr8.1:6289798-6289817 MS.gene24852:CDS 45.0%
CAAGGAAGCGAATCCTTCTT+TGG + chr8.1:6291381-6291400 MS.gene24852:CDS 45.0%
CAGGAGGAAGAGTCATACAT+TGG + chr8.1:6290500-6290519 MS.gene24852:CDS 45.0%
CATACCTATGGACCTTGACA+TGG - chr8.1:6290554-6290573 None:intergenic 45.0%
CGATGAGATCATGTTAGCTG+TGG + chr8.1:6289504-6289523 MS.gene24852:CDS 45.0%
CGTCCTTTATAGCCTGGTTA+TGG - chr8.1:6289486-6289505 None:intergenic 45.0%
CTTGAGTGAAAGCCATAACC+AGG + chr8.1:6289471-6289490 MS.gene24852:CDS 45.0%
GAAGGGACTTGAAAAAGCTG+AGG - chr8.1:6289880-6289899 None:intergenic 45.0%
GGAGCAACAGTACTTGACAA+AGG + chr8.1:6291425-6291444 MS.gene24852:CDS 45.0%
GTACTTGACAAAGGAGAAGG+AGG + chr8.1:6291434-6291453 MS.gene24852:CDS 45.0%
TAAAATGGCAACCACTGCAG+TGG - chr8.1:6290258-6290277 None:intergenic 45.0%
TCTCATCGTCCTTTATAGCC+TGG - chr8.1:6289492-6289511 None:intergenic 45.0%
TGCAAATTGTGGGGATTCGA+GGG + chr8.1:6290298-6290317 MS.gene24852:CDS 45.0%
TGGGGTTTCTCATCAATCTG+TGG + chr8.1:6289817-6289836 MS.gene24852:CDS 45.0%
TTGATTCTCCTTTACCTCCG+CGG - chr8.1:6289398-6289417 None:intergenic 45.0%
TTGCAAATTGTGGGGATTCG+AGG + chr8.1:6290297-6290316 MS.gene24852:CDS 45.0%
! GATAACCGGGTTGAAGCTTA+TGG + chr8.1:6289285-6289304 MS.gene24852:CDS 45.0%
!! ACGGTTGGTGATGAGATTCA+TGG + chr8.1:6289586-6289605 MS.gene24852:CDS 45.0%
!! GTTGCAGTGCCATTTACACT+TGG + chr8.1:6289220-6289239 MS.gene24852:CDS 45.0%
!! TCTACACTCAGCGTTGATTG+AGG + chr8.1:6290094-6290113 MS.gene24852:CDS 45.0%
!! TTTGGTGTCTATGATGGGCA+TGG + chr8.1:6289958-6289977 MS.gene24852:CDS 45.0%
ACATCAGATCACGGTATCCG+CGG + chr8.1:6289378-6289397 MS.gene24852:CDS 50.0%
ACTATTGCTCCTGAGACTGC+TGG + chr8.1:6290230-6290249 MS.gene24852:CDS 50.0%
CTGTGGAAATAGACCGGAGA+TGG + chr8.1:6289834-6289853 MS.gene24852:CDS 50.0%
GTGGTCAGAAGACAACGCTA+TGG - chr8.1:6290348-6290367 None:intergenic 50.0%
TCACCAACCGTGACGATGAT+TGG - chr8.1:6289577-6289596 None:intergenic 50.0%
TCACCAATCATCGTCACGGT+TGG + chr8.1:6289571-6289590 MS.gene24852:CDS 50.0%
TGAAGCTCGGCAGTCAAGTT+TGG + chr8.1:6290121-6290140 MS.gene24852:CDS 50.0%
TTGAGTAGTGGCCCTCTATG+GGG + chr8.1:6289799-6289818 MS.gene24852:CDS 50.0%
TTGGCCATGTCAAGGTCCAT+AGG + chr8.1:6290547-6290566 MS.gene24852:CDS 50.0%
! ACTTTTGCAGCCGAATCGAG+AGG + chr8.1:6290453-6290472 MS.gene24852:intron 50.0%
! AGTTGGTGCGTCTGTTGTCT+CGG + chr8.1:6289417-6289436 MS.gene24852:CDS 50.0%
! TTGGTGTCTTGGCCATGTCA+AGG + chr8.1:6290539-6290558 MS.gene24852:CDS 50.0%
AGCCGAATCGAGAGGATGAG+AGG + chr8.1:6290461-6290480 MS.gene24852:intron 55.0%
AGGGCAAGAATCGAAGCAGC+AGG + chr8.1:6290481-6290500 MS.gene24852:CDS 55.0%
CGAGGGCTGTCTTGTATCGT+GGG + chr8.1:6290315-6290334 MS.gene24852:CDS 55.0%
GCAACGGCATCTTCCATCTC+CGG - chr8.1:6289850-6289869 None:intergenic 55.0%
GCAAGAATCGAAGCAGCAGG+AGG + chr8.1:6290484-6290503 MS.gene24852:CDS 55.0%
GCCCTCTCATCCTCTCGATT+CGG - chr8.1:6290466-6290485 None:intergenic 55.0%
GCCGAATCGAGAGGATGAGA+GGG + chr8.1:6290462-6290481 MS.gene24852:intron 55.0%
TCGAGGGCTGTCTTGTATCG+TGG + chr8.1:6290314-6290333 MS.gene24852:CDS 55.0%
TCTAAACTCGCCCTCCACAG+AGG + chr8.1:6291494-6291513 MS.gene24852:CDS 55.0%
TGTTATCGCCGCTTCCTCTG+TGG - chr8.1:6291511-6291530 None:intergenic 55.0%
TTCTGCTCGGCCTTTAGTGC+CGG - chr8.1:6289637-6289656 None:intergenic 55.0%
! CGAGGTACTTCCGGCACTAA+AGG + chr8.1:6289624-6289643 MS.gene24852:CDS 55.0%
! TGATGGGCATGGAGGCTTTC+AGG + chr8.1:6289969-6289988 MS.gene24852:CDS 55.0%
!! GGTGTCTATGATGGGCATGG+AGG + chr8.1:6289961-6289980 MS.gene24852:CDS 55.0%
ATCGCCGCTTCCTCTGTGGA+GGG - chr8.1:6291507-6291526 None:intergenic 60.0%
CACGGTATCCGCGGAGGTAA+AGG + chr8.1:6289387-6289406 MS.gene24852:CDS 60.0%
TATCGCCGCTTCCTCTGTGG+AGG - chr8.1:6291508-6291527 None:intergenic 60.0%
TCAGATCACGGTATCCGCGG+AGG + chr8.1:6289381-6289400 MS.gene24852:CDS 60.0%
CTCGCCCTCCACAGAGGAAG+CGG + chr8.1:6291500-6291519 MS.gene24852:CDS 65.0%
GCAGTGGAGCCAGCAGTCTC+AGG - chr8.1:6290242-6290261 None:intergenic 65.0%
!! GACTGCTGGCTCCACTGCAG+TGG + chr8.1:6290244-6290263 MS.gene24852:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 6289199 6291586 6289199 ID=MS.gene24852
chr8.1 mRNA 6289199 6291586 6289199 ID=MS.gene24852.t1;Parent=MS.gene24852
chr8.1 exon 6289199 6289990 6289199 ID=MS.gene24852.t1.exon1;Parent=MS.gene24852.t1
chr8.1 CDS 6289199 6289990 6289199 ID=cds.MS.gene24852.t1;Parent=MS.gene24852.t1
chr8.1 exon 6290071 6290370 6290071 ID=MS.gene24852.t1.exon2;Parent=MS.gene24852.t1
chr8.1 CDS 6290071 6290370 6290071 ID=cds.MS.gene24852.t1;Parent=MS.gene24852.t1
chr8.1 exon 6290463 6290568 6290463 ID=MS.gene24852.t1.exon3;Parent=MS.gene24852.t1
chr8.1 CDS 6290463 6290568 6290463 ID=cds.MS.gene24852.t1;Parent=MS.gene24852.t1
chr8.1 exon 6291243 6291586 6291243 ID=MS.gene24852.t1.exon4;Parent=MS.gene24852.t1
chr8.1 CDS 6291243 6291586 6291243 ID=cds.MS.gene24852.t1;Parent=MS.gene24852.t1
Gene Sequence

>MS.gene24852

ATGGAAGAAATATCTTCAAGTGTTGCAGTGCCATTTACACTTGGAAATTTGATTCAAAAGGATGCTGCTGTTACAACTCATATGGAGATAACCGGGTTGAAGCTTATGGCAAATACTGCTGCTGCTTTGATATTAAATCCTGCAGTTGGAAATGAAAACCATGCTGATGTTAGTCTTCAACATCAGATCACGGTATCCGCGGAGGTAAAGGAGAATCAAGTTGGTGCGTCTGTTGTCTCGGAAATGTTGATTGAATGTGGGAGTAATTGGATCTTGAGTGAAAGCCATAACCAGGCTATAAAGGACGATGAGATCATGTTAGCTGTGGATTTTCAGTGCCTGCATAATTCAGGCTCTCAATCTGTGGCAGATTCACCAATCATCGTCACGGTTGGTGATGAGATTCATGGTAAGTTTAGCATAAACGAGGTACTTCCGGCACTAAAGGCCGAGCAGAATACGGTTTCTGTTGCAATGGATATTGAGAGGGAAAATCGAAGCGTGTCAGAAGAGGCTGATCCAAAACTATCTGCTATTCTTCTTGATCAGTTGCCAAAGGAGAACAAAACATTGAGAACAAGCAACCAGAATGGTTTGGAATTGAGTAGTGGCCCTCTATGGGGTTTCTCATCAATCTGTGGAAATAGACCGGAGATGGAAGATGCCGTTGCTGTCAAACCTCAGCTTTTTCAAGTCCCTTCACAGATGCTAATGGATGACCATTTGAATGAAAACACAAAATATCCACAAGTCCATTTTTTTGGTGTCTATGATGGGCATGGAGGCTTTCAGGTAAGCGCCTTAATCAAATCATACAATTTGTATTATTGAAATTTTTATTTATTTTGCTGAGAGTGTTTTGTTTCTGATAGGTTGCTAATTACTGTCAAGAACGTCTACACTCAGCGTTGATTGAGGAGATTGAAGCTCGGCAGTCAAGTTTGGATGAAGCAAATGGGAGAAACAATTGGCAGGAAAATTGGAATAAAGTATTGTTCAATTGTTTTCAGAAAGTAGATGGTGAGATTGAAACTATTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATTTTAAATCAAACCCACATAATTGTTGCAAATTGTGGGGATTCGAGGGCTGTCTTGTATCGTGGGAAAGAAGCCATAGCGTTGTCTTCTGACCACAAAGTAAGGCATTTCATAGTTATTTCACAATATTTTTGAAATTATGTCAGACGCTGAAGTTGGCTGATACAAGAAACTGTACTTCACTTTTGCAGCCGAATCGAGAGGATGAGAGGGCAAGAATCGAAGCAGCAGGAGGAAGAGTCATACATTGGAAAGGATACAGAGTTCTTGGTGTCTTGGCCATGTCAAGGTCCATAGGTATGTATCTGTTGCATGATTGGTTTTCTTTCAACTTGATACTACTTTGCTTGCATGTTACTCTATTCAGTTTGGTATTAAGGGGTCAAAGTTTATTTATCATATAAATCAAACGTTTTTTGCTGAATAGGGACACAGGAACAAACAGTATTCTCTGCATGTCACTAACACATATTTGTTTTAGCTTTTTAAGTTTTAAGAAAGAAAGGAACACTACGTTACGAACAATTGTTAGTTTATTGATAGGAATTCGTGGTCAGTTTCTTTTAATCAGTATCTCAAGGACCCATAACTTTGGAACAGAAAAAGACTTTGCTATAATTCCTTGAATGTGATTTCAGCCTTTGGATAGGATATATTCTTTTTGTTGCATAAATTAGTTCTTGTTTGAGTTAAAAACTGTTTTAAAATCACTATCACAGATCTTCATCTCTGTCATTAATATATTTTTGTTTTAGACTTTGAAGTTTTAAGAAAAATATTATAGTGCATCATGGCAAGTTTCCTTTATTCAGAAAATGGCTTAATACACTTCCTTGAATGTGATTTCAGCCTTTGGATATCATAAACTTGTTTTGCTACATAAATTAGTCCTTGTTTGAGTTAAAAACTGCAATAAAATCACCCCATATCAGTAATTGAGATTAATTTTTCTTATTGTCTTGTTCAAACAGGTGATAGATACTTGAAACCATGGATAATTCCAGAACCAGAAGTCAATATTGTGCAAAGAGAGAAAAATGATGAGTGCCTTATTTTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCATGTGATATTGCAAGGAAGCGAATCCTTCTTTGGCACAAGAAGTATGGTGACAACGGAGCAACAGTACTTGACAAAGGAGAAGGAGGAGTTGATCTTGCATCTCAGTCTGCCGCAGAGTATCTATCTAAACTCGCCCTCCACAGAGGAAGCGGCGATAACATCTCTGTAATTGTGATAGATTTAAAGGCTGTGAGAAAATTGAAGAGAAAGACATAA

Protein sequence

>MS.gene24852.t1

MEEISSSVAVPFTLGNLIQKDAAVTTHMEITGLKLMANTAAALILNPAVGNENHADVSLQHQITVSAEVKENQVGASVVSEMLIECGSNWILSESHNQAIKDDEIMLAVDFQCLHNSGSQSVADSPIIVTVGDEIHGKFSINEVLPALKAEQNTVSVAMDIERENRSVSEEADPKLSAILLDQLPKENKTLRTSNQNGLELSSGPLWGFSSICGNRPEMEDAVAVKPQLFQVPSQMLMDDHLNENTKYPQVHFFGVYDGHGGFQVANYCQERLHSALIEEIEARQSSLDEANGRNNWQENWNKVLFNCFQKVDGEIETIAPETAGSTAVVAILNQTHIIVANCGDSRAVLYRGKEAIALSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVQREKNDECLILASDGLWDVMTNEEACDIARKRILLWHKKYGDNGATVLDKGEGGVDLASQSAAEYLSKLALHRGSGDNISVIVIDLKAVRKLKRKT