Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056825.t1 | XP_013444787.1 | 93.2 | 528 | 30 | 1 | 1 | 528 | 1 | 522 | 4.20E-219 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056825.t1 | Q0DYP5 | 50.5 | 319 | 154 | 3 | 201 | 519 | 114 | 428 | 4.9e-83 | 310.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056825.t1 | A0A072TN24 | 93.2 | 528 | 30 | 1 | 1 | 528 | 1 | 522 | 3.0e-219 | 770.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049983 | MS.gene056825 | 0.802343 | 5.87E-49 | -1.69E-46 |
| MS.gene053427 | MS.gene056825 | 0.823618 | 1.26E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene056825 | 0.811879 | 5.61E-51 | -1.69E-46 |
| MS.gene056825 | MS.gene057155 | 0.824394 | 8.27E-54 | -1.69E-46 |
| MS.gene056825 | MS.gene060935 | 0.828908 | 6.92E-55 | -1.69E-46 |
| MS.gene056825 | MS.gene060937 | 0.83364 | 4.75E-56 | -1.69E-46 |
| MS.gene056825 | MS.gene064969 | 0.803877 | 2.83E-49 | -1.69E-46 |
| MS.gene056825 | MS.gene066012 | 0.800632 | 1.32E-48 | -1.69E-46 |
| MS.gene056825 | MS.gene066746 | 0.811146 | 8.10E-51 | -1.69E-46 |
| MS.gene056825 | MS.gene068703 | 0.925299 | 2.21E-90 | -1.69E-46 |
| MS.gene056825 | MS.gene07510 | 0.804942 | 1.70E-49 | -1.69E-46 |
| MS.gene056825 | MS.gene08461 | 0.804775 | 1.84E-49 | -1.69E-46 |
| MS.gene056825 | MS.gene24852 | 0.807595 | 4.68E-50 | -1.69E-46 |
| MS.gene056825 | MS.gene28918 | 0.800124 | 1.67E-48 | -1.69E-46 |
| MS.gene056825 | MS.gene34195 | 0.816793 | 4.60E-52 | -1.69E-46 |
| MS.gene056825 | MS.gene37567 | 0.802939 | 4.42E-49 | -1.69E-46 |
| MS.gene056825 | MS.gene37570 | 0.815485 | 9.03E-52 | -1.69E-46 |
| MS.gene056825 | MS.gene44179 | 0.8232 | 1.57E-53 | -1.69E-46 |
| MS.gene056825 | MS.gene52122 | 0.81244 | 4.23E-51 | -1.69E-46 |
| MS.gene056825 | MS.gene53612 | 0.806156 | 9.43E-50 | -1.69E-46 |
| MS.gene056825 | MS.gene55707 | 0.802534 | 5.36E-49 | -1.69E-46 |
| MS.gene056825 | MS.gene59697 | 0.806318 | 8.72E-50 | -1.69E-46 |
| MS.gene056825 | MS.gene71945 | 0.8262 | 3.09E-54 | -1.69E-46 |
| MS.gene056825 | MS.gene74537 | 0.81128 | 7.57E-51 | -1.69E-46 |
| MS.gene056825 | MS.gene77356 | 0.808219 | 3.45E-50 | -1.69E-46 |
| MS.gene056825 | MS.gene77361 | 0.807204 | 5.67E-50 | -1.69E-46 |
| MS.gene056825 | MS.gene84279 | 0.845997 | 2.86E-59 | -1.69E-46 |
| MS.gene056825 | MS.gene86826 | 0.815702 | 8.07E-52 | -1.69E-46 |
| MS.gene056825 | MS.gene92320 | 0.803576 | 3.26E-49 | -1.69E-46 |
| MS.gene056825 | MS.gene92981 | 0.801795 | 7.61E-49 | -1.69E-46 |
| MS.gene056825 | MS.gene93123 | 0.805767 | 1.14E-49 | -1.69E-46 |
| MS.gene056825 | MS.gene94674 | 0.803981 | 2.69E-49 | -1.69E-46 |
| MS.gene056825 | MS.gene96191 | 0.81535 | 9.67E-52 | -1.69E-46 |
| MS.gene056825 | MS.gene96209 | 0.8077 | 4.45E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056825.t1 | MTR_8g028700 | 94.318 | 528 | 24 | 1 | 1 | 528 | 1 | 522 | 0.0 | 1034 |
| MS.gene056825.t1 | MTR_8g032850 | 69.956 | 456 | 100 | 5 | 108 | 528 | 454 | 907 | 0.0 | 649 |
| MS.gene056825.t1 | MTR_8g032850 | 54.358 | 436 | 139 | 11 | 19 | 407 | 17 | 439 | 3.68e-136 | 417 |
| MS.gene056825.t1 | MTR_6g465150 | 53.727 | 322 | 145 | 3 | 200 | 521 | 113 | 430 | 1.24e-127 | 380 |
| MS.gene056825.t1 | MTR_1g021590 | 26.936 | 297 | 186 | 11 | 229 | 517 | 104 | 377 | 4.14e-18 | 87.4 |
| MS.gene056825.t1 | MTR_4g068457 | 25.566 | 309 | 198 | 12 | 220 | 517 | 113 | 400 | 1.10e-14 | 77.0 |
| MS.gene056825.t1 | MTR_5g087680 | 31.220 | 205 | 122 | 8 | 284 | 478 | 204 | 399 | 2.61e-14 | 75.9 |
| MS.gene056825.t1 | MTR_5g018520 | 23.707 | 232 | 144 | 6 | 317 | 517 | 136 | 365 | 2.48e-13 | 72.4 |
| MS.gene056825.t1 | MTR_2g436510 | 24.898 | 245 | 166 | 9 | 290 | 527 | 184 | 417 | 2.23e-12 | 69.7 |
| MS.gene056825.t1 | MTR_1g072140 | 26.054 | 261 | 134 | 9 | 227 | 432 | 59 | 315 | 3.86e-12 | 67.8 |
| MS.gene056825.t1 | MTR_8g089650 | 26.906 | 223 | 127 | 9 | 236 | 429 | 211 | 426 | 9.21e-12 | 67.8 |
| MS.gene056825.t1 | MTR_4g119620 | 24.545 | 220 | 147 | 7 | 228 | 433 | 111 | 325 | 1.20e-11 | 66.2 |
| MS.gene056825.t1 | MTR_4g106480 | 26.818 | 220 | 131 | 9 | 236 | 429 | 179 | 394 | 5.14e-11 | 65.1 |
| MS.gene056825.t1 | MTR_4g104410 | 26.147 | 218 | 133 | 10 | 236 | 429 | 148 | 361 | 7.34e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056825.t1 | AT4G25440 | 52.795 | 322 | 148 | 3 | 200 | 521 | 107 | 424 | 2.42e-120 | 361 |
| MS.gene056825.t1 | AT4G25440 | 52.795 | 322 | 148 | 3 | 200 | 521 | 107 | 424 | 2.42e-120 | 361 |
| MS.gene056825.t1 | AT4G25440 | 52.795 | 322 | 148 | 3 | 200 | 521 | 107 | 424 | 2.42e-120 | 361 |
| MS.gene056825.t1 | AT5G51980 | 47.453 | 373 | 177 | 5 | 156 | 521 | 71 | 431 | 5.50e-120 | 360 |
| MS.gene056825.t1 | AT5G51980 | 47.453 | 373 | 177 | 5 | 156 | 521 | 71 | 431 | 5.50e-120 | 360 |
| MS.gene056825.t1 | AT5G49200 | 50.467 | 321 | 152 | 5 | 200 | 516 | 94 | 411 | 1.30e-106 | 325 |
| MS.gene056825.t1 | AT5G40880 | 48.182 | 330 | 167 | 3 | 196 | 524 | 117 | 443 | 9.84e-104 | 318 |
| MS.gene056825.t1 | AT5G40880 | 48.182 | 330 | 167 | 3 | 196 | 524 | 146 | 472 | 3.33e-103 | 318 |
| MS.gene056825.t1 | AT1G49450 | 26.642 | 274 | 157 | 11 | 281 | 517 | 137 | 403 | 6.70e-18 | 87.0 |
| MS.gene056825.t1 | AT3G50390 | 24.422 | 303 | 193 | 11 | 227 | 517 | 91 | 369 | 7.74e-18 | 86.7 |
| MS.gene056825.t1 | AT3G18950 | 24.221 | 289 | 177 | 10 | 265 | 517 | 125 | 407 | 2.63e-16 | 82.0 |
| MS.gene056825.t1 | AT1G47610 | 25.161 | 310 | 190 | 11 | 223 | 517 | 10 | 292 | 4.15e-15 | 77.4 |
| MS.gene056825.t1 | AT2G26490 | 30.180 | 222 | 127 | 9 | 236 | 434 | 205 | 421 | 1.30e-13 | 73.6 |
| MS.gene056825.t1 | AT2G26490 | 23.373 | 338 | 225 | 12 | 190 | 517 | 51 | 364 | 5.56e-13 | 71.6 |
| MS.gene056825.t1 | AT4G15900 | 25.714 | 245 | 164 | 8 | 290 | 527 | 190 | 423 | 1.12e-12 | 70.9 |
| MS.gene056825.t1 | AT3G16650 | 25.957 | 235 | 157 | 9 | 290 | 518 | 184 | 407 | 1.64e-12 | 70.1 |
| MS.gene056825.t1 | AT3G49660 | 24.771 | 218 | 147 | 6 | 228 | 433 | 104 | 316 | 6.73e-12 | 67.0 |
| MS.gene056825.t1 | AT4G02730 | 27.236 | 246 | 156 | 10 | 204 | 432 | 93 | 332 | 1.64e-11 | 66.2 |
| MS.gene056825.t1 | AT2G22040 | 23.830 | 235 | 145 | 8 | 230 | 442 | 77 | 299 | 1.91e-11 | 65.9 |
| MS.gene056825.t1 | AT1G21651 | 28.947 | 190 | 115 | 8 | 252 | 430 | 628 | 808 | 5.29e-11 | 65.9 |
Find 147 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAATAGAAATACCTTAA+TGG | 0.219415 | 8.4:-66982251 | None:intergenic |
| AGTGATGCAACCAGTTTAAA+AGG | 0.256880 | 8.4:-66982151 | None:intergenic |
| AGAACTTGTCCCAACAAATA+AGG | 0.271802 | 8.4:-66982462 | None:intergenic |
| CACCGAGTATCTGCAAATAC+TGG | 0.296151 | 8.4:+66981300 | MS.gene056825:CDS |
| GACAGTCTTCGTATTATGTT+TGG | 0.305087 | 8.4:-66981132 | None:intergenic |
| CTGTTGTTTGCCTAGCTGTT+GGG | 0.314055 | 8.4:+66982191 | MS.gene056825:CDS |
| TCGGGAAAACATGTGTTTAT+TGG | 0.317668 | 8.4:+66980754 | MS.gene056825:CDS |
| CAGGGTGTTGTTACACTCTC+TGG | 0.319990 | 8.4:+66982717 | MS.gene056825:intron |
| CCGGCTGAACAGAATATTAT+AGG | 0.320889 | 8.4:-66982762 | None:intergenic |
| GCAGCCTTCGTGTTAGGTTT+AGG | 0.324588 | 8.4:-66981002 | None:intergenic |
| GACTGTCTTCGCATTATGTT+GGG | 0.336532 | 8.4:-66981051 | None:intergenic |
| TTAGGTCCATCAAGAGTAAA+AGG | 0.343847 | 8.4:-66981864 | None:intergenic |
| GGATCAGACAAACTTTATTC+TGG | 0.347221 | 8.4:+66981571 | MS.gene056825:CDS |
| TCCAGCGTTGGCAGCATTAC+AGG | 0.354425 | 8.4:-66980841 | None:intergenic |
| GACCGGTTCAGTATTATGTT+TGG | 0.360342 | 8.4:-66981213 | None:intergenic |
| AACCAGTTTAAAAGGGGAAT+TGG | 0.367309 | 8.4:-66982143 | None:intergenic |
| TACGATGCAGCCTTCGTGTT+AGG | 0.369395 | 8.4:-66981008 | None:intergenic |
| CAGTCACCTCCCTTATTTGT+TGG | 0.373476 | 8.4:+66982452 | MS.gene056825:CDS |
| ATCCAGGGATCAAACCATTA+AGG | 0.373611 | 8.4:+66982237 | MS.gene056825:CDS |
| ACCGGTTCAGTATTATGTTT+GGG | 0.381120 | 8.4:-66981212 | None:intergenic |
| GGCTCCAAGATGTTGTATTC+AGG | 0.381554 | 8.4:+66982214 | MS.gene056825:CDS |
| TCCCTCAAGCTTTGCTATTG+AGG | 0.382939 | 8.4:-66981393 | None:intergenic |
| TACCTTAATGGTTTGATCCC+TGG | 0.415666 | 8.4:-66982239 | None:intergenic |
| ATGTGTTGATGTAACAAATC+TGG | 0.417863 | 8.4:+66981639 | MS.gene056825:CDS |
| CCGGTCTTGAATAGAAAGAT+TGG | 0.418536 | 8.4:+66981230 | MS.gene056825:CDS |
| ACAGTCTTGAATAGAAAGAT+TGG | 0.421505 | 8.4:+66981068 | MS.gene056825:CDS |
| AAAACCACGAATGTAAATTC+TGG | 0.421752 | 8.4:-66981355 | None:intergenic |
| TTCTTCACTGGAGACAGAAC+TGG | 0.422568 | 8.4:+66982986 | MS.gene056825:CDS |
| TGGGACAAGTTCTTGTTATC+CGG | 0.430673 | 8.4:+66982472 | MS.gene056825:CDS |
| CGGACATGGGACTGCCGTAC+TGG | 0.430737 | 8.4:+66981613 | MS.gene056825:CDS |
| GTTTGCTGACAGTCTGGAAA+TGG | 0.431501 | 8.4:+66983008 | MS.gene056825:CDS |
| CCTTCGTGTTAGGTTTAGGA+AGG | 0.435165 | 8.4:-66980998 | None:intergenic |
| GAACTGGTTTGCTGACAGTC+TGG | 0.438059 | 8.4:+66983002 | MS.gene056825:CDS |
| CTTTATTCTGGCAGCACGGA+TGG | 0.439016 | 8.4:+66981583 | MS.gene056825:CDS |
| AGTCACCTCCCTTATTTGTT+GGG | 0.440083 | 8.4:+66982453 | MS.gene056825:CDS |
| GATACTCATACACTCTTAGC+TGG | 0.440260 | 8.4:+66981918 | MS.gene056825:CDS |
| GTGAATGACAGTTGTGTTCA+TGG | 0.441949 | 8.4:+66981323 | MS.gene056825:CDS |
| TTCGCATTATGTTGGGGAAG+GGG | 0.448059 | 8.4:-66981044 | None:intergenic |
| TTTAAAAGGGGAATTGGCTT+CGG | 0.448072 | 8.4:-66982137 | None:intergenic |
| CCAGGTGGTCTCTTCTTCAC+TGG | 0.448835 | 8.4:+66982974 | MS.gene056825:CDS |
| AGTGCCAGAATTTACATTCG+TGG | 0.450873 | 8.4:+66981351 | MS.gene056825:CDS |
| TATCACTGGAATGACAATTC+CGG | 0.457711 | 8.4:+66981546 | MS.gene056825:CDS |
| TCCTGTAATGCTGCCAACGC+TGG | 0.458201 | 8.4:+66980840 | MS.gene056825:CDS |
| GAACTTGTCCCAACAAATAA+GGG | 0.462252 | 8.4:-66982461 | None:intergenic |
| ACATGTGTTTATTGGCTCGC+TGG | 0.462559 | 8.4:+66980762 | MS.gene056825:CDS |
| GTGATGCAACCAGTTTAAAA+GGG | 0.463109 | 8.4:-66982150 | None:intergenic |
| AATGCAACAGAAATCCTTGT+AGG | 0.464299 | 8.4:+66980787 | MS.gene056825:CDS |
| TCTGTTGTTTGCCTAGCTGT+TGG | 0.467062 | 8.4:+66982190 | MS.gene056825:CDS |
| GATGGTGCAGTCAGATGAAC+CGG | 0.468498 | 8.4:-66982491 | None:intergenic |
| TGTTGTTTGCCTAGCTGTTG+GGG | 0.470098 | 8.4:+66982192 | MS.gene056825:CDS |
| GTCTGGTTTCAAAACGAAGC+AGG | 0.474832 | 8.4:+66982517 | MS.gene056825:CDS |
| TCAAAACGAAGCAGGGACTT+TGG | 0.477076 | 8.4:+66982525 | MS.gene056825:CDS |
| ATAGCATGGACTTGTCCCTT+AGG | 0.477981 | 8.4:-66981882 | None:intergenic |
| TCCCAAACATAATACTGAAC+CGG | 0.478214 | 8.4:+66981211 | MS.gene056825:CDS |
| AGATGTTGTATTCAGGATCC+AGG | 0.478981 | 8.4:+66982221 | MS.gene056825:CDS |
| AGACTGTCTTCGCATTATGT+TGG | 0.484234 | 8.4:-66981052 | None:intergenic |
| TCTTCGCATTATGTTGGGGA+AGG | 0.486626 | 8.4:-66981046 | None:intergenic |
| GCATTACAGGAAGCAGTTGC+CGG | 0.487014 | 8.4:-66980828 | None:intergenic |
| CTTTGATCAGTGAGGGCCCA+TGG | 0.488204 | 8.4:+66981677 | MS.gene056825:CDS |
| CTTCGTATTATGTTTGGAAA+GGG | 0.489389 | 8.4:-66981126 | None:intergenic |
| CCAATCTTTCTATTCAAGAC+CGG | 0.489613 | 8.4:-66981230 | None:intergenic |
| GGATCCTGAATACAACATCT+TGG | 0.489979 | 8.4:-66982218 | None:intergenic |
| CTGTTTGCAAAGGAAGAAGT+TGG | 0.490216 | 8.4:+66982935 | MS.gene056825:CDS |
| TCTTCTTGCAGAGCTGATGC+TGG | 0.491261 | 8.4:+66980924 | MS.gene056825:CDS |
| CATGTGTTTATTGGCTCGCT+GGG | 0.491753 | 8.4:+66980763 | MS.gene056825:CDS |
| TAAGAGTGTATGAGTATCCT+TGG | 0.493515 | 8.4:-66981913 | None:intergenic |
| CTGACTGCACCATCAAGGTC+TGG | 0.495156 | 8.4:+66982500 | MS.gene056825:CDS |
| TCCTCAATAGCAAAGCTTGA+GGG | 0.497866 | 8.4:+66981392 | MS.gene056825:CDS |
| AGGGTGTTGTTACACTCTCT+GGG | 0.499535 | 8.4:+66982718 | MS.gene056825:intron |
| ACTGTCTTGAATAGAAAGAC+TGG | 0.503936 | 8.4:+66981149 | MS.gene056825:CDS |
| CCAGTGAAGAAGAGACCACC+TGG | 0.507498 | 8.4:-66982974 | None:intergenic |
| ATCAATCATGGATGTGAAAG+TGG | 0.508504 | 8.4:+66980704 | None:intergenic |
| CGGATGGGACACTTCGGACA+TGG | 0.508983 | 8.4:+66981599 | MS.gene056825:CDS |
| CTTCGCATTATGTTGGGGAA+GGG | 0.518439 | 8.4:-66981045 | None:intergenic |
| TCTTCGTATTATGTTTGGAA+AGG | 0.520136 | 8.4:-66981127 | None:intergenic |
| CCATGCTATGATTGTTGCCA+AGG | 0.524769 | 8.4:+66981896 | MS.gene056825:CDS |
| TAAAGTTTGTCTGATCCATC+CGG | 0.525387 | 8.4:-66981565 | None:intergenic |
| GTTCAGTATTATGTTTGGGA+AGG | 0.528869 | 8.4:-66981208 | None:intergenic |
| ACCCAGTATTTGCAGATACT+CGG | 0.530599 | 8.4:-66981302 | None:intergenic |
| GTAGAACTGAACAAGTCATC+GGG | 0.535669 | 8.4:+66980736 | MS.gene056825:CDS |
| TTCGTGTTAGGTTTAGGAAG+GGG | 0.535787 | 8.4:-66980996 | None:intergenic |
| CTTCGTGTTAGGTTTAGGAA+GGG | 0.538310 | 8.4:-66980997 | None:intergenic |
| TTCATCTGACTGCACCATCA+AGG | 0.538469 | 8.4:+66982495 | MS.gene056825:CDS |
| CCTATAATATTCTGTTCAGC+CGG | 0.540187 | 8.4:+66982762 | MS.gene056825:CDS |
| GTTTCTTCATAGTGCAGCGC+CGG | 0.544515 | 8.4:+66980809 | MS.gene056825:CDS |
| CATCAGCTCTGCAAGAAGAC+GGG | 0.546896 | 8.4:-66980920 | None:intergenic |
| TTCAGTATTATGTTTGGGAA+GGG | 0.547534 | 8.4:-66981207 | None:intergenic |
| TCTCATACACATACGATGAA+TGG | 0.547953 | 8.4:-66980971 | None:intergenic |
| AAGATTGGAGATGACAGAGA+TGG | 0.549609 | 8.4:+66981245 | MS.gene056825:CDS |
| TTTACTCTTGATGGACCTAA+GGG | 0.550479 | 8.4:+66981867 | MS.gene056825:CDS |
| AAACTGGTTGCATCACTATG+TGG | 0.551665 | 8.4:+66982157 | MS.gene056825:CDS |
| GAGGTGAACTGAATTGTCTC+CGG | 0.555285 | 8.4:-66982781 | None:intergenic |
| CGAAGCAGGGACTTTGGAAG+TGG | 0.555385 | 8.4:+66982531 | MS.gene056825:CDS |
| ATGTTGCTTCACCGTGCGAA+GGG | 0.560125 | 8.4:-66980893 | None:intergenic |
| GCATCAGCTCTGCAAGAAGA+CGG | 0.563807 | 8.4:-66980921 | None:intergenic |
| ACCGAGTATCTGCAAATACT+GGG | 0.565524 | 8.4:+66981301 | MS.gene056825:CDS |
| TTCCTCAATAGCAAAGCTTG+AGG | 0.567998 | 8.4:+66981391 | MS.gene056825:CDS |
| AGAAGAGCAGCCTACCTTGA+CGG | 0.572709 | 8.4:-66981722 | None:intergenic |
| GTTACCTCTTTGATCAGTGA+GGG | 0.574699 | 8.4:+66981670 | MS.gene056825:CDS |
| AGTAGAACTGAACAAGTCAT+CGG | 0.577794 | 8.4:+66980735 | MS.gene056825:CDS |
| GCAGCACGGATGGGACACTT+CGG | 0.578120 | 8.4:+66981593 | MS.gene056825:CDS |
| AGATTGGAGATGACAGAGAT+GGG | 0.578565 | 8.4:+66981246 | MS.gene056825:CDS |
| TTTATTCTGGCAGCACGGAT+GGG | 0.579379 | 8.4:+66981584 | MS.gene056825:CDS |
| TGTGTTGATGTAACAAATCT+GGG | 0.579833 | 8.4:+66981640 | MS.gene056825:CDS |
| GATGTTGCTTCACCGTGCGA+AGG | 0.580329 | 8.4:-66980894 | None:intergenic |
| GGATGGGACACTTCGGACAT+GGG | 0.580368 | 8.4:+66981600 | MS.gene056825:CDS |
| AAAGCTTGAGGGACACAAGA+AGG | 0.580476 | 8.4:+66981403 | MS.gene056825:CDS |
| AATCTACAGATTTGCAGAGA+GGG | 0.581842 | 8.4:+66982907 | MS.gene056825:intron |
| GGATTAGTAGATATATCCCC+AGG | 0.581913 | 8.4:+66982956 | MS.gene056825:CDS |
| GAAATGGTTGGAAGAATACA+AGG | 0.586054 | 8.4:+66983024 | MS.gene056825:CDS |
| GTTGGAAGAATACAAGGTTG+AGG | 0.593531 | 8.4:+66983030 | MS.gene056825:CDS |
| CCACTTTGTCATGACTCAAG+AGG | 0.605130 | 8.4:-66983056 | None:intergenic |
| GTTGTTTGCCTAGCTGTTGG+GGG | 0.610117 | 8.4:+66982193 | MS.gene056825:CDS |
| TCTGGTTTCAAAACGAAGCA+GGG | 0.611958 | 8.4:+66982518 | MS.gene056825:CDS |
| CAATCTACAGATTTGCAGAG+AGG | 0.615212 | 8.4:+66982906 | MS.gene056825:intron |
| CATCAACACATTGACCAGTA+CGG | 0.615787 | 8.4:-66981627 | None:intergenic |
| CTTACGATGGCAGTTCGTAG+AGG | 0.616152 | 8.4:-66982800 | None:intergenic |
| CAAACTTTATTCTGGCAGCA+CGG | 0.616301 | 8.4:+66981579 | MS.gene056825:CDS |
| GCTGACAGTCTGGAAATGGT+TGG | 0.617109 | 8.4:+66983012 | MS.gene056825:CDS |
| GAGGGGTAGACTGTTTGCAA+AGG | 0.618235 | 8.4:+66982925 | MS.gene056825:CDS |
| GATGTTGTATTCAGGATCCA+GGG | 0.620953 | 8.4:+66982222 | MS.gene056825:CDS |
| AGCATTATGATATCCAGCGT+TGG | 0.629499 | 8.4:-66980853 | None:intergenic |
| TGATGCAACCAGTTTAAAAG+GGG | 0.631191 | 8.4:-66982149 | None:intergenic |
| CCTTGGCAACAATCATAGCA+TGG | 0.631546 | 8.4:-66981896 | None:intergenic |
| TACACTCTTAGCTGGAGCAG+AGG | 0.636749 | 8.4:+66981926 | MS.gene056825:CDS |
| TCATGGATGTGAAAGTGGCA+AGG | 0.637601 | 8.4:+66980709 | None:intergenic |
| TTGTACACTCAAATGTGTCA+AGG | 0.637803 | 8.4:-66982405 | None:intergenic |
| GCACTATGAAGAAACCTACA+AGG | 0.638653 | 8.4:-66980801 | None:intergenic |
| AGCAAGCACAGAAGTTGCTG+AGG | 0.642199 | 8.4:+66981181 | MS.gene056825:CDS |
| ATCTACAGATTTGCAGAGAG+GGG | 0.646500 | 8.4:+66982908 | MS.gene056825:intron |
| ACTGGAATGACAATTCCGGA+TGG | 0.647752 | 8.4:+66981550 | MS.gene056825:CDS |
| TATTTGCAGATACTCGGTGA+AGG | 0.649197 | 8.4:-66981296 | None:intergenic |
| GGCAAACAACAGATTTAGTG+TGG | 0.650060 | 8.4:-66982180 | None:intergenic |
| AGTTACCTCTTTGATCAGTG+AGG | 0.652681 | 8.4:+66981669 | MS.gene056825:CDS |
| TGGTATGAAGGACACCGTCA+AGG | 0.657661 | 8.4:+66981708 | MS.gene056825:CDS |
| AGGATGGTGTAATTTCTGCA+TGG | 0.659390 | 8.4:+66982104 | MS.gene056825:intron |
| AGTGGCATATTCACACAATG+TGG | 0.660456 | 8.4:+66982549 | MS.gene056825:CDS |
| GGTGTAATTTCTGCATGGAG+AGG | 0.661385 | 8.4:+66982109 | MS.gene056825:CDS |
| TGGGCCCTCACTGATCAAAG+AGG | 0.666424 | 8.4:-66981674 | None:intergenic |
| ACTGTCTTCGCATTATGTTG+GGG | 0.672217 | 8.4:-66981050 | None:intergenic |
| AAACGACATTACCCTTCGCA+CGG | 0.680771 | 8.4:+66980882 | MS.gene056825:CDS |
| CAGTGAAGAAGAGACCACCT+GGG | 0.699762 | 8.4:-66982973 | None:intergenic |
| CTTGTCCCAACAAATAAGGG+AGG | 0.701410 | 8.4:-66982458 | None:intergenic |
| AGACACGACTCAAGTCGTTG+AGG | 0.708911 | 8.4:+66981100 | MS.gene056825:CDS |
| CCTTCCTAAACCTAACACGA+AGG | 0.723886 | 8.4:+66980998 | MS.gene056825:CDS |
| TTAGTAGATATATCCCCAGG+TGG | 0.744171 | 8.4:+66982959 | MS.gene056825:CDS |
| AGTGAAGAAGAGACCACCTG+GGG | 0.744451 | 8.4:-66982972 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATTTTTATTTAAATCAC+AGG | + | chr8.4:66982084-66982103 | MS.gene056825:intron | 15.0% |
| !!! | TTTTTATTCTGATTATTACA+GGG | + | chr8.4:66982699-66982718 | MS.gene056825:intron | 15.0% |
| !!! | TTTTTTATTCTGATTATTAC+AGG | + | chr8.4:66982698-66982717 | MS.gene056825:intron | 15.0% |
| !! | AAAATATACTATACAACTAG+TGG | - | chr8.4:66982015-66982034 | None:intergenic | 20.0% |
| !! | AAACAATAGAAATACCTTAA+TGG | - | chr8.4:66982254-66982273 | None:intergenic | 20.0% |
| !! | AAACATTTCTCAAAAACATA+AGG | - | chr8.4:66981460-66981479 | None:intergenic | 20.0% |
| !! | ATTTCTATTGTTTGGAAATA+CGG | + | chr8.4:66982261-66982280 | MS.gene056825:intron | 20.0% |
| !! | TATTTATGTTGAACATCATT+TGG | + | chr8.4:66982630-66982649 | MS.gene056825:intron | 20.0% |
| !! | TTTGTTTGTAGTGATTAAAT+TGG | + | chr8.4:66982659-66982678 | MS.gene056825:intron | 20.0% |
| !!! | AATATTATAGGCTTATTTTC+TGG | - | chr8.4:66982753-66982772 | None:intergenic | 20.0% |
| !!! | ATTAAGGTATTTCTATTGTT+TGG | + | chr8.4:66982253-66982272 | MS.gene056825:intron | 20.0% |
| !!! | TATCTTTTATTGTTTTATCC+AGG | + | chr8.4:66982375-66982394 | MS.gene056825:intron | 20.0% |
| !!! | TTTTTATTTAAATCACAGGA+TGG | + | chr8.4:66982088-66982107 | MS.gene056825:intron | 20.0% |
| ! | CAAAATCAGCTTTCAAATTA+TGG | - | chr8.4:66981800-66981819 | None:intergenic | 25.0% |
| ! | TCTAATCTATGAATCATCTT+TGG | + | chr8.4:66982286-66982305 | MS.gene056825:intron | 25.0% |
| ! | TTTGTAGTGATTAAATTGGT+AGG | + | chr8.4:66982663-66982682 | MS.gene056825:intron | 25.0% |
| !! | TTTGAGAAATGTTTGAAACT+AGG | + | chr8.4:66981466-66981485 | MS.gene056825:intron | 25.0% |
| !!! | AATTTACATTCGTGGTTTTA+TGG | + | chr8.4:66981359-66981378 | MS.gene056825:CDS | 25.0% |
| !!! | TTATTGTTTTATCCAGGTTT+GGG | + | chr8.4:66982381-66982400 | MS.gene056825:intron | 25.0% |
| !!! | TTTATTGTTTTATCCAGGTT+TGG | + | chr8.4:66982380-66982399 | MS.gene056825:intron | 25.0% |
| AAAACCACGAATGTAAATTC+TGG | - | chr8.4:66981358-66981377 | None:intergenic | 30.0% | |
| AACAACCATAAGCAATATGT+GGG | - | chr8.4:66981958-66981977 | None:intergenic | 30.0% | |
| AAGTTTACATGACAACATGA+TGG | - | chr8.4:66982843-66982862 | None:intergenic | 30.0% | |
| AATCTATGAATCATCTTTGG+TGG | + | chr8.4:66982289-66982308 | MS.gene056825:intron | 30.0% | |
| ACAGTCTTGAATAGAAAGAT+TGG | + | chr8.4:66981068-66981087 | MS.gene056825:CDS | 30.0% | |
| CATTTCTCAAAAACATAAGG+TGG | - | chr8.4:66981457-66981476 | None:intergenic | 30.0% | |
| CTTCGTATTATGTTTGGAAA+GGG | - | chr8.4:66981129-66981148 | None:intergenic | 30.0% | |
| TAACAACCATAAGCAATATG+TGG | - | chr8.4:66981959-66981978 | None:intergenic | 30.0% | |
| TATACATAGCATTTGTGCAT+AGG | + | chr8.4:66982594-66982613 | MS.gene056825:intron | 30.0% | |
| TCATACCAACAAAAATCCAT+GGG | - | chr8.4:66981696-66981715 | None:intergenic | 30.0% | |
| TCTTCGTATTATGTTTGGAA+AGG | - | chr8.4:66981130-66981149 | None:intergenic | 30.0% | |
| TTCAGTATTATGTTTGGGAA+GGG | - | chr8.4:66981210-66981229 | None:intergenic | 30.0% | |
| TTCATACCAACAAAAATCCA+TGG | - | chr8.4:66981697-66981716 | None:intergenic | 30.0% | |
| ! | ATGGATTTTTGTTGGTATGA+AGG | + | chr8.4:66981696-66981715 | MS.gene056825:CDS | 30.0% |
| ! | ATGTGTTGATGTAACAAATC+TGG | + | chr8.4:66981639-66981658 | MS.gene056825:CDS | 30.0% |
| ! | ATTTTTGAACAGCTTATCAC+TGG | + | chr8.4:66981532-66981551 | MS.gene056825:intron | 30.0% |
| ! | TGTGTTGATGTAACAAATCT+GGG | + | chr8.4:66981640-66981659 | MS.gene056825:CDS | 30.0% |
| AACCAGTTTAAAAGGGGAAT+TGG | - | chr8.4:66982146-66982165 | None:intergenic | 35.0% | |
| AACTACCCACATATTGCTTA+TGG | + | chr8.4:66981950-66981969 | MS.gene056825:intron | 35.0% | |
| AATCTACAGATTTGCAGAGA+GGG | + | chr8.4:66982907-66982926 | MS.gene056825:intron | 35.0% | |
| AATGCAACAGAAATCCTTGT+AGG | + | chr8.4:66980787-66980806 | MS.gene056825:CDS | 35.0% | |
| ACTGTCTTGAATAGAAAGAC+TGG | + | chr8.4:66981149-66981168 | MS.gene056825:CDS | 35.0% | |
| AGAACTTGTCCCAACAAATA+AGG | - | chr8.4:66982465-66982484 | None:intergenic | 35.0% | |
| AGTAGAACTGAACAAGTCAT+CGG | + | chr8.4:66980735-66980754 | MS.gene056825:CDS | 35.0% | |
| AGTGATGCAACCAGTTTAAA+AGG | - | chr8.4:66982154-66982173 | None:intergenic | 35.0% | |
| CCAATCTTTCTATTCAAGAC+CGG | - | chr8.4:66981071-66981090 | None:intergenic | 35.0% | |
| CCTATAATATTCTGTTCAGC+CGG | + | chr8.4:66982762-66982781 | MS.gene056825:CDS | 35.0% | |
| CTTGAAATGTAATCTTGAGC+TGG | + | chr8.4:66982860-66982879 | MS.gene056825:intron | 35.0% | |
| GAAATGGTTGGAAGAATACA+AGG | + | chr8.4:66983024-66983043 | MS.gene056825:CDS | 35.0% | |
| GAACTTGTCCCAACAAATAA+GGG | - | chr8.4:66982464-66982483 | None:intergenic | 35.0% | |
| GACAGTCTTCGTATTATGTT+TGG | - | chr8.4:66981135-66981154 | None:intergenic | 35.0% | |
| GGATCAGACAAACTTTATTC+TGG | + | chr8.4:66981571-66981590 | MS.gene056825:CDS | 35.0% | |
| GGTAGCAAATTTACTTACGA+TGG | - | chr8.4:66982816-66982835 | None:intergenic | 35.0% | |
| GTAGTGATTAAATTGGTAGG+AGG | + | chr8.4:66982666-66982685 | MS.gene056825:intron | 35.0% | |
| GTGATGCAACCAGTTTAAAA+GGG | - | chr8.4:66982153-66982172 | None:intergenic | 35.0% | |
| GTTCAGTATTATGTTTGGGA+AGG | - | chr8.4:66981211-66981230 | None:intergenic | 35.0% | |
| TAAAGTTTGTCTGATCCATC+CGG | - | chr8.4:66981568-66981587 | None:intergenic | 35.0% | |
| TATCACTGGAATGACAATTC+CGG | + | chr8.4:66981546-66981565 | MS.gene056825:CDS | 35.0% | |
| TCCCAAACATAATACTGAAC+CGG | + | chr8.4:66981211-66981230 | MS.gene056825:CDS | 35.0% | |
| TCGGGAAAACATGTGTTTAT+TGG | + | chr8.4:66980754-66980773 | MS.gene056825:CDS | 35.0% | |
| TCTCATACACATACGATGAA+TGG | - | chr8.4:66980974-66980993 | None:intergenic | 35.0% | |
| TGATGCAACCAGTTTAAAAG+GGG | - | chr8.4:66982152-66982171 | None:intergenic | 35.0% | |
| TGTCATTGTGGTATTTGTGA+AGG | + | chr8.4:66981818-66981837 | MS.gene056825:intron | 35.0% | |
| TTAGGTCCATCAAGAGTAAA+AGG | - | chr8.4:66981867-66981886 | None:intergenic | 35.0% | |
| TTGTACACTCAAATGTGTCA+AGG | - | chr8.4:66982408-66982427 | None:intergenic | 35.0% | |
| ! | ACCGGTTCAGTATTATGTTT+GGG | - | chr8.4:66981215-66981234 | None:intergenic | 35.0% |
| ! | TAAGAGTGTATGAGTATCCT+TGG | - | chr8.4:66981916-66981935 | None:intergenic | 35.0% |
| ! | TTTAAAAGGGGAATTGGCTT+CGG | - | chr8.4:66982140-66982159 | None:intergenic | 35.0% |
| ! | TTTACTCTTGATGGACCTAA+GGG | + | chr8.4:66981867-66981886 | MS.gene056825:CDS | 35.0% |
| !! | GAAAGCTGATTTTGTCATTG+TGG | + | chr8.4:66981806-66981825 | MS.gene056825:intron | 35.0% |
| !! | TTTTACTCTTGATGGACCTA+AGG | + | chr8.4:66981866-66981885 | MS.gene056825:CDS | 35.0% |
| !!! | ATTCGTGGTTTTATGGTGAT+GGG | + | chr8.4:66981366-66981385 | MS.gene056825:CDS | 35.0% |
| AAACTGGTTGCATCACTATG+TGG | + | chr8.4:66982157-66982176 | MS.gene056825:CDS | 40.0% | |
| AAGATTGGAGATGACAGAGA+TGG | + | chr8.4:66981245-66981264 | MS.gene056825:CDS | 40.0% | |
| ACCCAGTATTTGCAGATACT+CGG | - | chr8.4:66981305-66981324 | None:intergenic | 40.0% | |
| ACCGAGTATCTGCAAATACT+GGG | + | chr8.4:66981301-66981320 | MS.gene056825:CDS | 40.0% | |
| ACTGTCTTCGCATTATGTTG+GGG | - | chr8.4:66981053-66981072 | None:intergenic | 40.0% | |
| AGACTGTCTTCGCATTATGT+TGG | - | chr8.4:66981055-66981074 | None:intergenic | 40.0% | |
| AGATGTTGTATTCAGGATCC+AGG | + | chr8.4:66982221-66982240 | MS.gene056825:CDS | 40.0% | |
| AGATTGGAGATGACAGAGAT+GGG | + | chr8.4:66981246-66981265 | MS.gene056825:CDS | 40.0% | |
| AGCATTATGATATCCAGCGT+TGG | - | chr8.4:66980856-66980875 | None:intergenic | 40.0% | |
| AGGATGGTGTAATTTCTGCA+TGG | + | chr8.4:66982104-66982123 | MS.gene056825:intron | 40.0% | |
| AGTGCCAGAATTTACATTCG+TGG | + | chr8.4:66981351-66981370 | MS.gene056825:CDS | 40.0% | |
| AGTGGCATATTCACACAATG+TGG | + | chr8.4:66982549-66982568 | MS.gene056825:CDS | 40.0% | |
| AGTTACCTCTTTGATCAGTG+AGG | + | chr8.4:66981669-66981688 | MS.gene056825:CDS | 40.0% | |
| ATCCAGGGATCAAACCATTA+AGG | + | chr8.4:66982237-66982256 | MS.gene056825:CDS | 40.0% | |
| ATCTACAGATTTGCAGAGAG+GGG | + | chr8.4:66982908-66982927 | MS.gene056825:intron | 40.0% | |
| CAAACTTTATTCTGGCAGCA+CGG | + | chr8.4:66981579-66981598 | MS.gene056825:CDS | 40.0% | |
| CAATCTACAGATTTGCAGAG+AGG | + | chr8.4:66982906-66982925 | MS.gene056825:intron | 40.0% | |
| CATCAACACATTGACCAGTA+CGG | - | chr8.4:66981630-66981649 | None:intergenic | 40.0% | |
| CCGGCTGAACAGAATATTAT+AGG | - | chr8.4:66982765-66982784 | None:intergenic | 40.0% | |
| CCGGTCTTGAATAGAAAGAT+TGG | + | chr8.4:66981230-66981249 | MS.gene056825:CDS | 40.0% | |
| CTCTCTGCAAATCTGTAGAT+TGG | - | chr8.4:66982908-66982927 | None:intergenic | 40.0% | |
| CTGTTTGCAAAGGAAGAAGT+TGG | + | chr8.4:66982935-66982954 | MS.gene056825:CDS | 40.0% | |
| CTTCGTGTTAGGTTTAGGAA+GGG | - | chr8.4:66981000-66981019 | None:intergenic | 40.0% | |
| GACTGTCTTCGCATTATGTT+GGG | - | chr8.4:66981054-66981073 | None:intergenic | 40.0% | |
| GATACTCATACACTCTTAGC+TGG | + | chr8.4:66981918-66981937 | MS.gene056825:CDS | 40.0% | |
| GATGTTGTATTCAGGATCCA+GGG | + | chr8.4:66982222-66982241 | MS.gene056825:CDS | 40.0% | |
| GCACTATGAAGAAACCTACA+AGG | - | chr8.4:66980804-66980823 | None:intergenic | 40.0% | |
| GGATCCTGAATACAACATCT+TGG | - | chr8.4:66982221-66982240 | None:intergenic | 40.0% | |
| GGCAAACAACAGATTTAGTG+TGG | - | chr8.4:66982183-66982202 | None:intergenic | 40.0% | |
| GTAGAACTGAACAAGTCATC+GGG | + | chr8.4:66980736-66980755 | MS.gene056825:CDS | 40.0% | |
| GTGAATGACAGTTGTGTTCA+TGG | + | chr8.4:66981323-66981342 | MS.gene056825:CDS | 40.0% | |
| GTTACCTCTTTGATCAGTGA+GGG | + | chr8.4:66981670-66981689 | MS.gene056825:CDS | 40.0% | |
| GTTGGAAGAATACAAGGTTG+AGG | + | chr8.4:66983030-66983049 | MS.gene056825:CDS | 40.0% | |
| TACCTTAATGGTTTGATCCC+TGG | - | chr8.4:66982242-66982261 | None:intergenic | 40.0% | |
| TCCTCAATAGCAAAGCTTGA+GGG | + | chr8.4:66981392-66981411 | MS.gene056825:CDS | 40.0% | |
| TTAGTAGATATATCCCCAGG+TGG | + | chr8.4:66982959-66982978 | MS.gene056825:CDS | 40.0% | |
| TTCCTCAATAGCAAAGCTTG+AGG | + | chr8.4:66981391-66981410 | MS.gene056825:CDS | 40.0% | |
| TTCGTGTTAGGTTTAGGAAG+GGG | - | chr8.4:66980999-66981018 | None:intergenic | 40.0% | |
| TTGTGGTATTTGTGAAGGCA+TGG | + | chr8.4:66981823-66981842 | MS.gene056825:intron | 40.0% | |
| ! | ACATGACAACATGATGGTGT+TGG | - | chr8.4:66982837-66982856 | None:intergenic | 40.0% |
| ! | AGCCAATTCCCCTTTTAAAC+TGG | + | chr8.4:66982141-66982160 | MS.gene056825:CDS | 40.0% |
| ! | AGTCACCTCCCTTATTTGTT+GGG | + | chr8.4:66982453-66982472 | MS.gene056825:CDS | 40.0% |
| ! | GACCGGTTCAGTATTATGTT+TGG | - | chr8.4:66981216-66981235 | None:intergenic | 40.0% |
| ! | GGATTAGTAGATATATCCCC+AGG | + | chr8.4:66982956-66982975 | MS.gene056825:CDS | 40.0% |
| ! | TATTTGCAGATACTCGGTGA+AGG | - | chr8.4:66981299-66981318 | None:intergenic | 40.0% |
| ! | TCTGGTTTCAAAACGAAGCA+GGG | + | chr8.4:66982518-66982537 | MS.gene056825:CDS | 40.0% |
| ! | TGGGACAAGTTCTTGTTATC+CGG | + | chr8.4:66982472-66982491 | MS.gene056825:CDS | 40.0% |
| !!! | CATTCGTGGTTTTATGGTGA+TGG | + | chr8.4:66981365-66981384 | MS.gene056825:CDS | 40.0% |
| !!! | GTTTTGAAACCAGACCTTGA+TGG | - | chr8.4:66982512-66982531 | None:intergenic | 40.0% |
| AAACGACATTACCCTTCGCA+CGG | + | chr8.4:66980882-66980901 | MS.gene056825:CDS | 45.0% | |
| AAAGCTTGAGGGACACAAGA+AGG | + | chr8.4:66981403-66981422 | MS.gene056825:CDS | 45.0% | |
| ACTGGAATGACAATTCCGGA+TGG | + | chr8.4:66981550-66981569 | MS.gene056825:CDS | 45.0% | |
| ATAGCATGGACTTGTCCCTT+AGG | - | chr8.4:66981885-66981904 | None:intergenic | 45.0% | |
| CACCGAGTATCTGCAAATAC+TGG | + | chr8.4:66981300-66981319 | MS.gene056825:CDS | 45.0% | |
| CCATGCTATGATTGTTGCCA+AGG | + | chr8.4:66981896-66981915 | MS.gene056825:CDS | 45.0% | |
| CCTTCCTAAACCTAACACGA+AGG | + | chr8.4:66980998-66981017 | MS.gene056825:CDS | 45.0% | |
| CCTTCGTGTTAGGTTTAGGA+AGG | - | chr8.4:66981001-66981020 | None:intergenic | 45.0% | |
| CCTTGGCAACAATCATAGCA+TGG | - | chr8.4:66981899-66981918 | None:intergenic | 45.0% | |
| CTTCGCATTATGTTGGGGAA+GGG | - | chr8.4:66981048-66981067 | None:intergenic | 45.0% | |
| CTTGTCCCAACAAATAAGGG+AGG | - | chr8.4:66982461-66982480 | None:intergenic | 45.0% | |
| GAGGTGAACTGAATTGTCTC+CGG | - | chr8.4:66982784-66982803 | None:intergenic | 45.0% | |
| GGCTCCAAGATGTTGTATTC+AGG | + | chr8.4:66982214-66982233 | MS.gene056825:CDS | 45.0% | |
| GGTGTAATTTCTGCATGGAG+AGG | + | chr8.4:66982109-66982128 | MS.gene056825:CDS | 45.0% | |
| TCAAAACGAAGCAGGGACTT+TGG | + | chr8.4:66982525-66982544 | MS.gene056825:CDS | 45.0% | |
| TCTTCGCATTATGTTGGGGA+AGG | - | chr8.4:66981049-66981068 | None:intergenic | 45.0% | |
| TTCATCTGACTGCACCATCA+AGG | + | chr8.4:66982495-66982514 | MS.gene056825:CDS | 45.0% | |
| TTCGCATTATGTTGGGGAAG+GGG | - | chr8.4:66981047-66981066 | None:intergenic | 45.0% | |
| TTCTTCACTGGAGACAGAAC+TGG | + | chr8.4:66982986-66983005 | MS.gene056825:CDS | 45.0% | |
| TTTATTCTGGCAGCACGGAT+GGG | + | chr8.4:66981584-66981603 | MS.gene056825:CDS | 45.0% | |
| ! | CAGTCACCTCCCTTATTTGT+TGG | + | chr8.4:66982452-66982471 | MS.gene056825:CDS | 45.0% |
| ! | CTGTTGTTTGCCTAGCTGTT+GGG | + | chr8.4:66982191-66982210 | MS.gene056825:CDS | 45.0% |
| ! | GCTGCACCTTTTACTCTTGA+TGG | + | chr8.4:66981858-66981877 | MS.gene056825:CDS | 45.0% |
| ! | GTCTGGTTTCAAAACGAAGC+AGG | + | chr8.4:66982517-66982536 | MS.gene056825:CDS | 45.0% |
| ! | GTTTGCTGACAGTCTGGAAA+TGG | + | chr8.4:66983008-66983027 | MS.gene056825:CDS | 45.0% |
| ! | TCTGTTGTTTGCCTAGCTGT+TGG | + | chr8.4:66982190-66982209 | MS.gene056825:CDS | 45.0% |
| ! | TGTTGTTTGCCTAGCTGTTG+GGG | + | chr8.4:66982192-66982211 | MS.gene056825:CDS | 45.0% |
| !! | ACATGTGTTTATTGGCTCGC+TGG | + | chr8.4:66980762-66980781 | MS.gene056825:CDS | 45.0% |
| !! | AGGGTGTTGTTACACTCTCT+GGG | + | chr8.4:66982718-66982737 | MS.gene056825:intron | 45.0% |
| !! | CATGTGTTTATTGGCTCGCT+GGG | + | chr8.4:66980763-66980782 | MS.gene056825:CDS | 45.0% |
| !! | TCCCTCAAGCTTTGCTATTG+AGG | - | chr8.4:66981396-66981415 | None:intergenic | 45.0% |
| AGAAGAGCAGCCTACCTTGA+CGG | - | chr8.4:66981725-66981744 | None:intergenic | 50.0% | |
| AGACACGACTCAAGTCGTTG+AGG | + | chr8.4:66981100-66981119 | MS.gene056825:CDS | 50.0% | |
| AGCAAGCACAGAAGTTGCTG+AGG | + | chr8.4:66981181-66981200 | MS.gene056825:CDS | 50.0% | |
| AGTGAAGAAGAGACCACCTG+GGG | - | chr8.4:66982975-66982994 | None:intergenic | 50.0% | |
| ATGAAGGACACCGTCAAGGT+AGG | + | chr8.4:66981712-66981731 | MS.gene056825:intron | 50.0% | |
| ATGTGTCAAGGTCCCAAACC+TGG | - | chr8.4:66982396-66982415 | None:intergenic | 50.0% | |
| CAGTGAAGAAGAGACCACCT+GGG | - | chr8.4:66982976-66982995 | None:intergenic | 50.0% | |
| CATCAGCTCTGCAAGAAGAC+GGG | - | chr8.4:66980923-66980942 | None:intergenic | 50.0% | |
| CTTACGATGGCAGTTCGTAG+AGG | - | chr8.4:66982803-66982822 | None:intergenic | 50.0% | |
| CTTTATTCTGGCAGCACGGA+TGG | + | chr8.4:66981583-66981602 | MS.gene056825:CDS | 50.0% | |
| GAGGGGTAGACTGTTTGCAA+AGG | + | chr8.4:66982925-66982944 | MS.gene056825:CDS | 50.0% | |
| GATGGTGCAGTCAGATGAAC+CGG | - | chr8.4:66982494-66982513 | None:intergenic | 50.0% | |
| GCAGCCTTCGTGTTAGGTTT+AGG | - | chr8.4:66981005-66981024 | None:intergenic | 50.0% | |
| GCATCAGCTCTGCAAGAAGA+CGG | - | chr8.4:66980924-66980943 | None:intergenic | 50.0% | |
| GCATTACAGGAAGCAGTTGC+CGG | - | chr8.4:66980831-66980850 | None:intergenic | 50.0% | |
| GCTGACAGTCTGGAAATGGT+TGG | + | chr8.4:66983012-66983031 | MS.gene056825:CDS | 50.0% | |
| GTTGTTTGCCTAGCTGTTGG+GGG | + | chr8.4:66982193-66982212 | MS.gene056825:CDS | 50.0% | |
| GTTTCTTCATAGTGCAGCGC+CGG | + | chr8.4:66980809-66980828 | MS.gene056825:CDS | 50.0% | |
| TACACTCTTAGCTGGAGCAG+AGG | + | chr8.4:66981926-66981945 | MS.gene056825:CDS | 50.0% | |
| TACGATGCAGCCTTCGTGTT+AGG | - | chr8.4:66981011-66981030 | None:intergenic | 50.0% | |
| TCTTCTTGCAGAGCTGATGC+TGG | + | chr8.4:66980924-66980943 | MS.gene056825:CDS | 50.0% | |
| TGGTATGAAGGACACCGTCA+AGG | + | chr8.4:66981708-66981727 | MS.gene056825:CDS | 50.0% | |
| ! | ATGTTGCTTCACCGTGCGAA+GGG | - | chr8.4:66980896-66980915 | None:intergenic | 50.0% |
| ! | GAGGGCCCATGGATTTTTGT+TGG | + | chr8.4:66981688-66981707 | MS.gene056825:CDS | 50.0% |
| !! | CAGGGTGTTGTTACACTCTC+TGG | + | chr8.4:66982717-66982736 | MS.gene056825:intron | 50.0% |
| !! | GAACTGGTTTGCTGACAGTC+TGG | + | chr8.4:66983002-66983021 | MS.gene056825:CDS | 50.0% |
| CCAGGTGGTCTCTTCTTCAC+TGG | + | chr8.4:66982974-66982993 | MS.gene056825:CDS | 55.0% | |
| CCAGTGAAGAAGAGACCACC+TGG | - | chr8.4:66982977-66982996 | None:intergenic | 55.0% | |
| CTGACTGCACCATCAAGGTC+TGG | + | chr8.4:66982500-66982519 | MS.gene056825:CDS | 55.0% | |
| CTTTGATCAGTGAGGGCCCA+TGG | + | chr8.4:66981677-66981696 | MS.gene056825:CDS | 55.0% | |
| GGATGGGACACTTCGGACAT+GGG | + | chr8.4:66981600-66981619 | MS.gene056825:CDS | 55.0% | |
| TCCTGTAATGCTGCCAACGC+TGG | + | chr8.4:66980840-66980859 | MS.gene056825:CDS | 55.0% | |
| TGGGCCCTCACTGATCAAAG+AGG | - | chr8.4:66981677-66981696 | None:intergenic | 55.0% | |
| ! | CGAAGCAGGGACTTTGGAAG+TGG | + | chr8.4:66982531-66982550 | MS.gene056825:CDS | 55.0% |
| ! | GATGTTGCTTCACCGTGCGA+AGG | - | chr8.4:66980897-66980916 | None:intergenic | 55.0% |
| !! | TCCAGCGTTGGCAGCATTAC+AGG | - | chr8.4:66980844-66980863 | None:intergenic | 55.0% |
| CGGATGGGACACTTCGGACA+TGG | + | chr8.4:66981599-66981618 | MS.gene056825:CDS | 60.0% | |
| GCAGCACGGATGGGACACTT+CGG | + | chr8.4:66981593-66981612 | MS.gene056825:CDS | 60.0% | |
| TCTTGGAGCCCCCAACAGCT+AGG | - | chr8.4:66982204-66982223 | None:intergenic | 60.0% | |
| CGGACATGGGACTGCCGTAC+TGG | + | chr8.4:66981613-66981632 | MS.gene056825:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 66980711 | 66983063 | 66980711 | ID=MS.gene056825 |
| chr8.4 | mRNA | 66980711 | 66983063 | 66980711 | ID=MS.gene056825.t1;Parent=MS.gene056825 |
| chr8.4 | exon | 66980711 | 66981424 | 66980711 | ID=MS.gene056825.t1.exon1;Parent=MS.gene056825.t1 |
| chr8.4 | CDS | 66980711 | 66981424 | 66980711 | ID=cds.MS.gene056825.t1;Parent=MS.gene056825.t1 |
| chr8.4 | exon | 66981544 | 66981729 | 66981544 | ID=MS.gene056825.t1.exon2;Parent=MS.gene056825.t1 |
| chr8.4 | CDS | 66981544 | 66981729 | 66981544 | ID=cds.MS.gene056825.t1;Parent=MS.gene056825.t1 |
| chr8.4 | exon | 66981840 | 66981947 | 66981840 | ID=MS.gene056825.t1.exon3;Parent=MS.gene056825.t1 |
| chr8.4 | CDS | 66981840 | 66981947 | 66981840 | ID=cds.MS.gene056825.t1;Parent=MS.gene056825.t1 |
| chr8.4 | exon | 66982106 | 66982258 | 66982106 | ID=MS.gene056825.t1.exon4;Parent=MS.gene056825.t1 |
| chr8.4 | CDS | 66982106 | 66982258 | 66982106 | ID=cds.MS.gene056825.t1;Parent=MS.gene056825.t1 |
| chr8.4 | exon | 66982397 | 66982576 | 66982397 | ID=MS.gene056825.t1.exon5;Parent=MS.gene056825.t1 |
| chr8.4 | CDS | 66982397 | 66982576 | 66982397 | ID=cds.MS.gene056825.t1;Parent=MS.gene056825.t1 |
| chr8.4 | exon | 66982720 | 66982817 | 66982720 | ID=MS.gene056825.t1.exon6;Parent=MS.gene056825.t1 |
| chr8.4 | CDS | 66982720 | 66982817 | 66982720 | ID=cds.MS.gene056825.t1;Parent=MS.gene056825.t1 |
| chr8.4 | exon | 66982916 | 66983063 | 66982916 | ID=MS.gene056825.t1.exon7;Parent=MS.gene056825.t1 |
| chr8.4 | CDS | 66982916 | 66983063 | 66982916 | ID=cds.MS.gene056825.t1;Parent=MS.gene056825.t1 |
| Gene Sequence |
| Protein sequence |
