Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051637.t1 | XP_013465913.1 | 96.8 | 376 | 12 | 0 | 1 | 376 | 1 | 376 | 2.90E-214 | 754.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051637.t1 | Q65XS5 | 37.3 | 308 | 143 | 10 | 107 | 368 | 85 | 388 | 2.2e-45 | 184.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051637.t1 | A0A072VD62 | 96.8 | 376 | 12 | 0 | 1 | 376 | 1 | 376 | 2.1e-214 | 754.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene051637 | 0.802171 | 6.37E-49 | -1.69E-46 |
| MS.gene04919 | MS.gene051637 | 0.807308 | 5.39E-50 | -1.69E-46 |
| MS.gene04920 | MS.gene051637 | 0.83105 | 2.08E-55 | -1.69E-46 |
| MS.gene049283 | MS.gene051637 | 0.809093 | 2.24E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene051637 | 0.813838 | 2.09E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene056699 | 0.800473 | 1.42E-48 | -1.69E-46 |
| MS.gene051637 | MS.gene058279 | 0.801484 | 8.81E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene05985 | -0.809222 | 2.10E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene060338 | 0.811458 | 6.93E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene060522 | 0.819962 | 8.82E-53 | -1.69E-46 |
| MS.gene051637 | MS.gene060937 | 0.809036 | 2.31E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene061729 | 0.819643 | 1.04E-52 | -1.69E-46 |
| MS.gene051637 | MS.gene061782 | 0.808303 | 3.31E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene062327 | 0.800907 | 1.16E-48 | -1.69E-46 |
| MS.gene051637 | MS.gene064638 | 0.810428 | 1.16E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene064969 | 0.804491 | 2.11E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene065510 | 0.80918 | 2.15E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene066012 | 0.823341 | 1.46E-53 | -1.69E-46 |
| MS.gene051637 | MS.gene066513 | 0.814914 | 1.21E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene070025 | 0.805598 | 1.24E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene071949 | 0.803299 | 3.72E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene072153 | 0.815776 | 7.77E-52 | -1.69E-46 |
| MS.gene051637 | MS.gene073244 | 0.810663 | 1.03E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene21853 | 0.805642 | 1.21E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene23680 | 0.800081 | 1.70E-48 | -1.69E-46 |
| MS.gene051637 | MS.gene24536 | 0.888727 | 4.57E-73 | -1.69E-46 |
| MS.gene051637 | MS.gene24852 | 0.802018 | 6.84E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene28918 | 0.810726 | 9.99E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene32801 | 0.818066 | 2.38E-52 | -1.69E-46 |
| MS.gene051637 | MS.gene32929 | 0.824075 | 9.83E-54 | -1.69E-46 |
| MS.gene051637 | MS.gene32965 | 0.906135 | 2.05E-80 | -1.69E-46 |
| MS.gene051637 | MS.gene34508 | 0.803288 | 3.74E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene36571 | 0.812564 | 3.98E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene37090 | 0.802877 | 4.55E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene39037 | 0.80876 | 2.64E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene44909 | 0.803194 | 3.92E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene51894 | 0.800016 | 1.76E-48 | -1.69E-46 |
| MS.gene051637 | MS.gene52122 | 0.805604 | 1.23E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene52849 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene52994 | 0.837536 | 4.91E-57 | -1.69E-46 |
| MS.gene051637 | MS.gene53391 | 0.800773 | 1.23E-48 | -1.69E-46 |
| MS.gene051637 | MS.gene53612 | 0.804246 | 2.37E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene55699 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene55707 | 0.802224 | 6.21E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene57343 | 0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene57783 | 0.802568 | 5.28E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene61184 | 0.825172 | 5.42E-54 | -1.69E-46 |
| MS.gene051637 | MS.gene62676 | 0.82766 | 1.38E-54 | -1.69E-46 |
| MS.gene051637 | MS.gene62677 | 0.842842 | 2.02E-58 | -1.69E-46 |
| MS.gene051637 | MS.gene63430 | 0.813371 | 2.65E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene64284 | 0.826302 | 2.92E-54 | -1.69E-46 |
| MS.gene051637 | MS.gene68198 | 0.811425 | 7.05E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene68653 | 0.808165 | 3.54E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene68654 | 0.810014 | 1.42E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene68712 | 0.808994 | 2.36E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene68713 | 0.818019 | 2.44E-52 | -1.69E-46 |
| MS.gene051637 | MS.gene70154 | 0.801888 | 7.28E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene71722 | 0.825828 | 3.79E-54 | -1.69E-46 |
| MS.gene051637 | MS.gene71945 | 0.82239 | 2.43E-53 | -1.69E-46 |
| MS.gene051637 | MS.gene73478 | 0.820346 | 7.20E-53 | -1.69E-46 |
| MS.gene051637 | MS.gene73678 | 0.80065 | 1.30E-48 | -1.69E-46 |
| MS.gene051637 | MS.gene74537 | 0.816699 | 4.83E-52 | -1.69E-46 |
| MS.gene051637 | MS.gene74819 | 0.825446 | 4.67E-54 | -1.69E-46 |
| MS.gene051637 | MS.gene75344 | 0.820849 | 5.52E-53 | -1.69E-46 |
| MS.gene051637 | MS.gene75521 | 0.822461 | 2.34E-53 | -1.69E-46 |
| MS.gene051637 | MS.gene76244 | 0.819655 | 1.04E-52 | -1.69E-46 |
| MS.gene051637 | MS.gene84179 | 0.810668 | 1.03E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene84733 | 0.822353 | 2.48E-53 | -1.69E-46 |
| MS.gene051637 | MS.gene84734 | 0.830305 | 3.17E-55 | -1.69E-46 |
| MS.gene051637 | MS.gene84866 | 0.822781 | 1.97E-53 | -1.69E-46 |
| MS.gene051637 | MS.gene84967 | 0.801869 | 7.34E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene85936 | 0.811621 | 6.39E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene92076 | 0.808182 | 3.51E-50 | -1.69E-46 |
| MS.gene051637 | MS.gene93123 | 0.811464 | 6.91E-51 | -1.69E-46 |
| MS.gene051637 | MS.gene94266 | 0.801942 | 7.10E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene95614 | 0.812964 | 3.25E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051637.t1 | MTR_1g016880 | 96.809 | 376 | 12 | 0 | 1 | 376 | 1 | 376 | 0.0 | 764 |
| MS.gene051637.t1 | MTR_8g015500 | 68.155 | 336 | 103 | 2 | 35 | 369 | 75 | 407 | 4.30e-177 | 499 |
| MS.gene051637.t1 | MTR_1g110290 | 56.190 | 315 | 134 | 4 | 63 | 376 | 82 | 393 | 1.10e-132 | 386 |
| MS.gene051637.t1 | MTR_2g005350 | 58.086 | 303 | 125 | 2 | 75 | 376 | 137 | 438 | 1.30e-131 | 384 |
| MS.gene051637.t1 | MTR_5g055480 | 49.856 | 347 | 166 | 3 | 26 | 366 | 37 | 381 | 2.11e-126 | 369 |
| MS.gene051637.t1 | MTR_5g006930 | 55.814 | 301 | 131 | 2 | 67 | 366 | 78 | 377 | 3.59e-126 | 368 |
| MS.gene051637.t1 | MTR_6g083830 | 52.532 | 316 | 148 | 2 | 52 | 366 | 96 | 410 | 5.01e-124 | 364 |
| MS.gene051637.t1 | MTR_5g006920 | 54.485 | 301 | 135 | 2 | 67 | 366 | 113 | 412 | 1.84e-121 | 358 |
| MS.gene051637.t1 | MTR_3g104840 | 49.834 | 301 | 131 | 4 | 67 | 366 | 103 | 384 | 2.96e-105 | 315 |
| MS.gene051637.t1 | MTR_3g108740 | 39.692 | 325 | 170 | 5 | 75 | 376 | 60 | 381 | 2.51e-79 | 248 |
| MS.gene051637.t1 | MTR_1g009960 | 38.356 | 365 | 196 | 7 | 25 | 366 | 32 | 390 | 1.30e-76 | 242 |
| MS.gene051637.t1 | MTR_4g127550 | 41.479 | 311 | 157 | 6 | 83 | 371 | 83 | 390 | 6.86e-75 | 238 |
| MS.gene051637.t1 | MTR_1g009960 | 40.379 | 317 | 177 | 5 | 25 | 334 | 32 | 343 | 1.78e-74 | 236 |
| MS.gene051637.t1 | MTR_2g037600 | 42.361 | 288 | 141 | 5 | 106 | 371 | 105 | 389 | 3.00e-72 | 231 |
| MS.gene051637.t1 | MTR_2g037620 | 41.115 | 287 | 145 | 4 | 106 | 371 | 97 | 380 | 1.93e-71 | 228 |
| MS.gene051637.t1 | MTR_8g094180 | 37.621 | 311 | 142 | 9 | 106 | 368 | 55 | 361 | 1.47e-55 | 186 |
| MS.gene051637.t1 | MTR_2g024120 | 38.170 | 317 | 152 | 10 | 91 | 366 | 46 | 359 | 9.58e-55 | 184 |
| MS.gene051637.t1 | MTR_8g094180 | 39.163 | 263 | 125 | 7 | 106 | 336 | 55 | 314 | 6.56e-53 | 179 |
| MS.gene051637.t1 | MTR_3g106930 | 34.520 | 281 | 171 | 7 | 107 | 374 | 95 | 375 | 2.16e-40 | 147 |
| MS.gene051637.t1 | MTR_1g048320 | 35.211 | 284 | 154 | 9 | 106 | 369 | 64 | 337 | 1.21e-37 | 139 |
| MS.gene051637.t1 | MTR_2g087610 | 33.667 | 300 | 156 | 11 | 107 | 374 | 78 | 366 | 2.06e-36 | 136 |
| MS.gene051637.t1 | MTR_1g031080 | 33.591 | 259 | 140 | 7 | 136 | 373 | 42 | 289 | 8.68e-35 | 130 |
| MS.gene051637.t1 | MTR_1g031060 | 34.708 | 291 | 158 | 9 | 106 | 374 | 80 | 360 | 9.72e-35 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051637.t1 | AT5G11730 | 67.183 | 387 | 115 | 3 | 1 | 376 | 1 | 386 | 0.0 | 535 |
| MS.gene051637.t1 | AT5G25970 | 64.987 | 377 | 121 | 1 | 3 | 368 | 4 | 380 | 3.08e-180 | 506 |
| MS.gene051637.t1 | AT5G25970 | 64.987 | 377 | 121 | 1 | 3 | 368 | 4 | 380 | 3.08e-180 | 506 |
| MS.gene051637.t1 | AT5G25970 | 64.987 | 377 | 121 | 1 | 3 | 368 | 4 | 380 | 3.08e-180 | 506 |
| MS.gene051637.t1 | AT3G21310 | 62.974 | 343 | 121 | 3 | 35 | 376 | 46 | 383 | 3.44e-161 | 457 |
| MS.gene051637.t1 | AT3G21310 | 62.974 | 343 | 121 | 3 | 35 | 376 | 46 | 383 | 3.44e-161 | 457 |
| MS.gene051637.t1 | AT1G51770 | 59.827 | 346 | 131 | 3 | 35 | 376 | 51 | 392 | 5.81e-157 | 447 |
| MS.gene051637.t1 | AT1G51770 | 55.043 | 347 | 121 | 4 | 34 | 376 | 50 | 365 | 3.80e-138 | 399 |
| MS.gene051637.t1 | AT1G10280 | 56.113 | 319 | 137 | 3 | 59 | 376 | 96 | 412 | 4.91e-132 | 384 |
| MS.gene051637.t1 | AT1G68390 | 54.487 | 312 | 139 | 2 | 67 | 376 | 98 | 408 | 1.76e-127 | 372 |
| MS.gene051637.t1 | AT5G16170 | 53.094 | 307 | 126 | 2 | 78 | 366 | 94 | 400 | 9.86e-118 | 348 |
| MS.gene051637.t1 | AT1G10880 | 53.103 | 290 | 131 | 2 | 81 | 368 | 93 | 379 | 4.69e-117 | 345 |
| MS.gene051637.t1 | AT1G68380 | 47.324 | 355 | 171 | 8 | 26 | 370 | 39 | 387 | 2.59e-108 | 323 |
| MS.gene051637.t1 | AT1G73810 | 50.492 | 305 | 145 | 3 | 70 | 371 | 113 | 414 | 7.29e-107 | 320 |
| MS.gene051637.t1 | AT3G21310 | 61.905 | 210 | 75 | 2 | 35 | 243 | 46 | 251 | 5.23e-90 | 272 |
| MS.gene051637.t1 | AT4G31350 | 43.878 | 294 | 139 | 5 | 96 | 366 | 76 | 366 | 6.08e-80 | 250 |
| MS.gene051637.t1 | AT4G31350 | 43.878 | 294 | 139 | 5 | 96 | 366 | 76 | 366 | 6.08e-80 | 250 |
| MS.gene051637.t1 | AT4G31350 | 43.878 | 294 | 139 | 5 | 96 | 366 | 76 | 366 | 6.08e-80 | 250 |
| MS.gene051637.t1 | AT4G30060 | 37.466 | 371 | 195 | 9 | 24 | 371 | 36 | 392 | 8.03e-76 | 240 |
| MS.gene051637.t1 | AT4G30060 | 37.466 | 371 | 195 | 9 | 24 | 371 | 36 | 392 | 8.03e-76 | 240 |
| MS.gene051637.t1 | AT4G31350 | 43.197 | 294 | 136 | 6 | 96 | 366 | 76 | 361 | 8.62e-76 | 239 |
| MS.gene051637.t1 | AT2G19160 | 37.634 | 372 | 187 | 13 | 24 | 368 | 33 | 386 | 1.67e-73 | 234 |
| MS.gene051637.t1 | AT2G19160 | 37.634 | 372 | 187 | 13 | 24 | 368 | 33 | 386 | 1.67e-73 | 234 |
| MS.gene051637.t1 | AT4G25870 | 38.854 | 314 | 165 | 6 | 79 | 368 | 70 | 380 | 2.66e-72 | 231 |
| MS.gene051637.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene051637.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene051637.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene051637.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene051637.t1 | AT5G57270 | 36.000 | 375 | 208 | 9 | 17 | 368 | 14 | 379 | 2.20e-70 | 226 |
| MS.gene051637.t1 | AT5G14550 | 41.270 | 252 | 126 | 6 | 103 | 335 | 61 | 309 | 3.26e-58 | 193 |
| MS.gene051637.t1 | AT5G14550 | 37.658 | 316 | 152 | 8 | 97 | 370 | 55 | 367 | 8.39e-58 | 192 |
| MS.gene051637.t1 | AT5G14550 | 37.342 | 316 | 152 | 9 | 97 | 369 | 55 | 367 | 1.51e-57 | 192 |
| MS.gene051637.t1 | AT5G25330 | 35.054 | 368 | 213 | 13 | 24 | 375 | 4 | 361 | 3.52e-50 | 172 |
| MS.gene051637.t1 | AT1G62305 | 36.190 | 315 | 155 | 10 | 92 | 366 | 56 | 364 | 1.12e-49 | 171 |
| MS.gene051637.t1 | AT1G11940 | 36.149 | 296 | 146 | 8 | 106 | 361 | 73 | 365 | 4.47e-49 | 170 |
| MS.gene051637.t1 | AT3G52060 | 34.409 | 279 | 163 | 8 | 106 | 373 | 74 | 343 | 4.53e-48 | 166 |
| MS.gene051637.t1 | AT5G14550 | 36.486 | 296 | 156 | 8 | 97 | 370 | 55 | 340 | 8.78e-47 | 163 |
| MS.gene051637.t1 | AT1G62305 | 41.304 | 230 | 107 | 7 | 92 | 299 | 56 | 279 | 3.98e-45 | 158 |
| MS.gene051637.t1 | AT1G11940 | 43.258 | 178 | 94 | 4 | 106 | 279 | 73 | 247 | 3.59e-40 | 143 |
| MS.gene051637.t1 | AT5G22070 | 33.445 | 299 | 159 | 9 | 107 | 374 | 71 | 360 | 2.55e-39 | 144 |
| MS.gene051637.t1 | AT4G32290 | 33.242 | 364 | 208 | 11 | 31 | 375 | 31 | 378 | 3.27e-37 | 138 |
| MS.gene051637.t1 | AT1G62305 | 32.381 | 315 | 143 | 11 | 92 | 366 | 56 | 340 | 2.47e-35 | 133 |
Find 85 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACCGACGAAGCTGAATT+TGG | 0.205834 | 1.3:-5623984 | None:intergenic |
| GTTCTTTATCACTCATATTA+TGG | 0.210415 | 1.3:-5618836 | None:intergenic |
| ACTTCTTTGGAGAGCTTCTT+TGG | 0.250935 | 1.3:+5618857 | MS.gene051637:CDS |
| AAAGGGTAATTCTTAATCTT+AGG | 0.260696 | 1.3:-5618882 | None:intergenic |
| CGTTGCCTCTTGCACCCGTC+TGG | 0.264984 | 1.3:+5618949 | MS.gene051637:CDS |
| GTATACACAATTAAGCATTT+TGG | 0.282389 | 1.3:+5618714 | MS.gene051637:CDS |
| TGAGTGATAAAGAACTTCTT+TGG | 0.293369 | 1.3:+5618844 | MS.gene051637:CDS |
| TAGAGTTTCTATTGTTATAC+AGG | 0.336336 | 1.3:-5624360 | None:intergenic |
| CTTGGAACCTTTGTTAGATA+TGG | 0.338936 | 1.3:+5624423 | MS.gene051637:CDS |
| TTGACTAGAGGGGCCATGTT+TGG | 0.342155 | 1.3:-5624046 | None:intergenic |
| AGGAACATAAAAGCAATCTT+AGG | 0.357395 | 1.3:-5618915 | None:intergenic |
| TGACTAGAGGGGCCATGTTT+GGG | 0.361044 | 1.3:-5624045 | None:intergenic |
| ATGCGGTGTCTTCCACAATA+TGG | 0.362225 | 1.3:-5624126 | None:intergenic |
| CTCTAGTCAACGTTACAAAA+TGG | 0.364473 | 1.3:+5624059 | MS.gene051637:CDS |
| ATCTTAGGAACTCTTTCAAA+AGG | 0.395819 | 1.3:-5618900 | None:intergenic |
| CTACAGTATTGTTCGAACTT+AGG | 0.401155 | 1.3:-5624154 | None:intergenic |
| ATTAGCAAGTAGTCTTCTTT+CGG | 0.401766 | 1.3:-5623864 | None:intergenic |
| GTCGGTGCATTTGATGATCC+TGG | 0.408642 | 1.3:+5623998 | MS.gene051637:CDS |
| CAACACACTCCCCGCTTGAA+TGG | 0.413577 | 1.3:-5624221 | None:intergenic |
| TCTTGTTCAGATTGCTGAGT+GGG | 0.414497 | 1.3:+5623820 | MS.gene051637:intron |
| GGGTGGATTGGTCTAGAGGT+GGG | 0.417834 | 1.3:+5624263 | MS.gene051637:CDS |
| CAAGATGCAATCGAGGGCTT+TGG | 0.417995 | 1.3:+5618596 | None:intergenic |
| GGGGCCCATCCAGCTACATT+TGG | 0.423319 | 1.3:+5624283 | MS.gene051637:CDS |
| TGTTGAAGAACGTGCTGGTT+TGG | 0.423389 | 1.3:+5618782 | MS.gene051637:CDS |
| CGGGGAGTGTGTTGGCAAAT+CGG | 0.432852 | 1.3:+5624230 | MS.gene051637:CDS |
| CTCTTGCACCCGTCTGGGAG+AGG | 0.432970 | 1.3:+5618955 | MS.gene051637:CDS |
| TGGCAAATCGGAGCATAACT+TGG | 0.433668 | 1.3:+5624242 | MS.gene051637:CDS |
| TCTGAAGAAGGAAAATCAAA+AGG | 0.438585 | 1.3:+5618621 | MS.gene051637:CDS |
| CAAAATATACATACCTGACT+AGG | 0.457704 | 1.3:-5619080 | None:intergenic |
| AACAGATGAAGGAGGAAACT+TGG | 0.460141 | 1.3:-5619039 | None:intergenic |
| AAAATTTGCTCCTAGTGCCT+TGG | 0.467657 | 1.3:+5624405 | MS.gene051637:CDS |
| CAATAGAATAAACCGCTCAT+TGG | 0.469034 | 1.3:-5623903 | None:intergenic |
| GGAAACTTGGCTTGATAAGA+AGG | 0.470311 | 1.3:-5619026 | None:intergenic |
| TAAGAGACAAATCCCTAGTC+AGG | 0.472658 | 1.3:+5619067 | MS.gene051637:CDS |
| GGAGCATAACTTGGGTGGAT+TGG | 0.479204 | 1.3:+5624251 | MS.gene051637:CDS |
| GCTTGAATGGTTAACATGGT+TGG | 0.484426 | 1.3:-5624208 | None:intergenic |
| AACGTGCTGGTTTGGAACAA+TGG | 0.490018 | 1.3:+5618790 | MS.gene051637:CDS |
| GTTGCCTCTTGCACCCGTCT+GGG | 0.494119 | 1.3:+5618950 | MS.gene051637:CDS |
| TTGGCTTGATAAGAAGGAGT+TGG | 0.500843 | 1.3:-5619020 | None:intergenic |
| CGTCCTCTTCCGTATGGACC+AGG | 0.503162 | 1.3:-5624016 | None:intergenic |
| GTAGAGAGGGATACATGATT+CGG | 0.512493 | 1.3:-5623927 | None:intergenic |
| GAGGCAACGGTCCTTTAGTA+AGG | 0.519249 | 1.3:-5618935 | None:intergenic |
| CTAGACTGAATTTGTAGAGA+GGG | 0.522832 | 1.3:-5623940 | None:intergenic |
| CTCTCCCAGACGGGTGCAAG+AGG | 0.532994 | 1.3:-5618954 | None:intergenic |
| TGGGTGGATTGGTCTAGAGG+TGG | 0.535618 | 1.3:+5624262 | MS.gene051637:CDS |
| TTGTAGCGTCCTCTTCCGTA+TGG | 0.537017 | 1.3:-5624022 | None:intergenic |
| TCTTAGGAACTCTTTCAAAA+GGG | 0.537953 | 1.3:-5618899 | None:intergenic |
| TTCAGATTGCTGAGTGGGGA+AGG | 0.538958 | 1.3:+5623825 | MS.gene051637:intron |
| AACGTTACAAAATGGCGTAA+AGG | 0.547258 | 1.3:+5624067 | MS.gene051637:CDS |
| ACCATGTTAACCATTCAAGC+GGG | 0.549181 | 1.3:+5624211 | MS.gene051637:CDS |
| CATATCTAACAAAGGTTCCA+AGG | 0.551048 | 1.3:-5624422 | None:intergenic |
| CTGAAGAAGGAAAATCAAAA+GGG | 0.552666 | 1.3:+5618622 | MS.gene051637:CDS |
| CAAGCTTGCCGTCCATATTG+TGG | 0.554887 | 1.3:+5624114 | MS.gene051637:CDS |
| CTTGTTCAGATTGCTGAGTG+GGG | 0.555008 | 1.3:+5623821 | MS.gene051637:intron |
| AGGGCTTTGGCATCTGAAGA+AGG | 0.556245 | 1.3:+5618609 | MS.gene051637:CDS |
| TTTGATGATCCTGGTCCATA+CGG | 0.557830 | 1.3:+5624007 | MS.gene051637:CDS |
| GATCCTGGTCCATACGGAAG+AGG | 0.560466 | 1.3:+5624013 | MS.gene051637:CDS |
| ATATTATGGATCAGATTTGA+CGG | 0.562286 | 1.3:-5618822 | None:intergenic |
| AAATCCAAATTCAGCTTCGT+CGG | 0.569207 | 1.3:+5623980 | MS.gene051637:CDS |
| GGTGGATTGGTCTAGAGGTG+GGG | 0.570596 | 1.3:+5624264 | MS.gene051637:CDS |
| AATGGCGTAAAGGCTCTCAA+TGG | 0.571190 | 1.3:+5624077 | MS.gene051637:CDS |
| CATTCAAGCGGGGAGTGTGT+TGG | 0.572448 | 1.3:+5624222 | MS.gene051637:CDS |
| ACTTGGGTGGATTGGTCTAG+AGG | 0.573299 | 1.3:+5624259 | MS.gene051637:CDS |
| CCCCGCTTGAATGGTTAACA+TGG | 0.575864 | 1.3:-5624212 | None:intergenic |
| CAGACGGGTGCAAGAGGCAA+CGG | 0.577547 | 1.3:-5618948 | None:intergenic |
| CCAGCACGTTCTTCAACACA+TGG | 0.586978 | 1.3:-5618777 | None:intergenic |
| AACCATGTTAACCATTCAAG+CGG | 0.590819 | 1.3:+5624210 | MS.gene051637:CDS |
| AAAATATACATACCTGACTA+GGG | 0.593555 | 1.3:-5619079 | None:intergenic |
| GAATTCACCATATCTAACAA+AGG | 0.595366 | 1.3:-5624430 | None:intergenic |
| TTCTTGTTCAGATTGCTGAG+TGG | 0.597688 | 1.3:+5623819 | MS.gene051637:intron |
| GTTCGAACAATACTGTAGAC+CGG | 0.597734 | 1.3:+5624159 | MS.gene051637:CDS |
| GGCAAATCGGAGCATAACTT+GGG | 0.604748 | 1.3:+5624243 | MS.gene051637:CDS |
| AACAAAGGTTCCAAGGCACT+AGG | 0.605399 | 1.3:-5624415 | None:intergenic |
| TTTAAGCAAGATGCAATCGA+GGG | 0.613015 | 1.3:+5618590 | None:intergenic |
| TACTTGACATCTCCAATGAG+CGG | 0.613960 | 1.3:+5623891 | MS.gene051637:CDS |
| CCATGTGTTGAAGAACGTGC+TGG | 0.624165 | 1.3:+5618777 | MS.gene051637:CDS |
| AAAACACAACACATAGTGCA+AGG | 0.624692 | 1.3:-5618680 | None:intergenic |
| AGGACGCTACAACCCAAACA+TGG | 0.648045 | 1.3:+5624033 | MS.gene051637:CDS |
| TGCTCGTCGACATAACAAGC+CGG | 0.649367 | 1.3:-5624178 | None:intergenic |
| TTCGAACTTAGGATAAAATG+CGG | 0.652612 | 1.3:-5624143 | None:intergenic |
| ACTAGACTGAATTTGTAGAG+AGG | 0.654314 | 1.3:-5623941 | None:intergenic |
| AAATCGGAGCATAACTTGGG+TGG | 0.655678 | 1.3:+5624246 | MS.gene051637:CDS |
| GGTGTCTTCCACAATATGGA+CGG | 0.663514 | 1.3:-5624122 | None:intergenic |
| CCATGTTAACCATTCAAGCG+GGG | 0.708045 | 1.3:+5624212 | MS.gene051637:CDS |
| TTATGGATCAGATTTGACGG+AGG | 0.709604 | 1.3:-5618819 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATTGTGAAGAATAA+TGG | + | chr1.3:5620170-5620189 | MS.gene051637:intron | 15.0% |
| !! | AGAAGTTAATAATGTTTAAT+TGG | + | chr1.3:5619153-5619172 | MS.gene051637:intron | 15.0% |
| !! | ATAAATAAATACATATCACT+TGG | + | chr1.3:5620203-5620222 | MS.gene051637:intron | 15.0% |
| !! | CTAAAACCTTAAATTATTAA+AGG | + | chr1.3:5620242-5620261 | MS.gene051637:intron | 15.0% |
| !! | TCATAAAAACTTACTATTTA+AGG | + | chr1.3:5621764-5621783 | MS.gene051637:intron | 15.0% |
| !!! | AAAAAATAGTTGTTTTCAAA+TGG | - | chr1.3:5620809-5620828 | None:intergenic | 15.0% |
| !!! | AATTAGTTTTACAAGTTTAT+AGG | + | chr1.3:5620938-5620957 | MS.gene051637:intron | 15.0% |
| !!! | ATGTTTTATGTCTTTTTATT+TGG | + | chr1.3:5619207-5619226 | MS.gene051637:intron | 15.0% |
| !!! | ATTAGTTTTACAAGTTTATA+GGG | + | chr1.3:5620939-5620958 | MS.gene051637:intron | 15.0% |
| !!! | ATTTAATTTATCATTTGATG+CGG | - | chr1.3:5620158-5620177 | None:intergenic | 15.0% |
| !!! | CTTTAATAATTTAAGGTTTT+AGG | - | chr1.3:5620244-5620263 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTGAAGAAAAAC+TGG | - | chr1.3:5623278-5623297 | None:intergenic | 15.0% |
| !! | AATACTAAAACATTGTCATT+TGG | + | chr1.3:5621489-5621508 | MS.gene051637:intron | 20.0% |
| !! | CTAAAAGCTTAAATTGTTAA+AGG | + | chr1.3:5620910-5620929 | MS.gene051637:intron | 20.0% |
| !! | TATGCAAAGTTATATTGTAA+GGG | + | chr1.3:5619871-5619890 | MS.gene051637:intron | 20.0% |
| !! | TTATGCAAAGTTATATTGTA+AGG | + | chr1.3:5619870-5619889 | MS.gene051637:intron | 20.0% |
| !! | TTCATGCCTTTAATAATTTA+AGG | - | chr1.3:5620251-5620270 | None:intergenic | 20.0% |
| !!! | AGGTTTTGATGAATTTTTTT+GGG | + | chr1.3:5619250-5619269 | MS.gene051637:intron | 20.0% |
| !!! | CTTTAACAATTTAAGCTTTT+AGG | - | chr1.3:5620912-5620931 | None:intergenic | 20.0% |
| !!! | TCTAGCTTAAAATATCATTT+CGG | + | chr1.3:5621457-5621476 | MS.gene051637:intron | 20.0% |
| ! | AAAATATACATACCTGACTA+GGG | - | chr1.3:5619082-5619101 | None:intergenic | 25.0% |
| ! | AAACTTAAGCTATTAAGTGA+AGG | + | chr1.3:5620549-5620568 | MS.gene051637:intron | 25.0% |
| ! | AAAGGGTAATTCTTAATCTT+AGG | - | chr1.3:5618885-5618904 | None:intergenic | 25.0% |
| ! | AACGAGATATCAGAAATATT+AGG | - | chr1.3:5620316-5620335 | None:intergenic | 25.0% |
| ! | AATCACTTTAACAAGATATC+TGG | - | chr1.3:5620993-5621012 | None:intergenic | 25.0% |
| ! | AATGTAACAGCTAAATGATA+AGG | + | chr1.3:5622301-5622320 | MS.gene051637:intron | 25.0% |
| ! | ACTTAATAGCTTAAGTTTAG+AGG | - | chr1.3:5620547-5620566 | None:intergenic | 25.0% |
| ! | ATATTAACCTGTGAAGAATA+AGG | + | chr1.3:5620641-5620660 | MS.gene051637:intron | 25.0% |
| ! | ATATTATGGATCAGATTTGA+CGG | - | chr1.3:5618825-5618844 | None:intergenic | 25.0% |
| ! | ATTAGAATTCTAACAGAATC+TGG | + | chr1.3:5620464-5620483 | MS.gene051637:intron | 25.0% |
| ! | ATTTACATATGTGGAATCTT+AGG | - | chr1.3:5621026-5621045 | None:intergenic | 25.0% |
| ! | ATTTCCCATTGAGATAAATA+TGG | + | chr1.3:5621820-5621839 | MS.gene051637:intron | 25.0% |
| ! | CAATTATCTGATAAAGATAC+TGG | - | chr1.3:5623309-5623328 | None:intergenic | 25.0% |
| ! | CTAGCTTAAAATATCATTTC+GGG | + | chr1.3:5621458-5621477 | MS.gene051637:intron | 25.0% |
| ! | CTCTTATAAAAAACAGATGA+AGG | - | chr1.3:5619053-5619072 | None:intergenic | 25.0% |
| ! | GTTCTTTATCACTCATATTA+TGG | - | chr1.3:5618839-5618858 | None:intergenic | 25.0% |
| ! | TAAATTGTGAAGAATAATGG+TGG | + | chr1.3:5620173-5620192 | MS.gene051637:intron | 25.0% |
| ! | TACACAGACAATGATAAAAA+GGG | - | chr1.3:5619846-5619865 | None:intergenic | 25.0% |
| ! | TACATAGTATTGTCAAATAG+CGG | - | chr1.3:5619448-5619467 | None:intergenic | 25.0% |
| ! | TAGAGTTTCTATTGTTATAC+AGG | - | chr1.3:5624363-5624382 | None:intergenic | 25.0% |
| ! | TGCTTAGGTTTATGTTAATA+TGG | + | chr1.3:5623768-5623787 | MS.gene051637:intron | 25.0% |
| ! | TGGAAAAACAGATATTACAA+AGG | + | chr1.3:5624303-5624322 | MS.gene051637:CDS | 25.0% |
| ! | TTAATCTGTGTTATCAATCT+TGG | - | chr1.3:5622753-5622772 | None:intergenic | 25.0% |
| ! | TTACACAGACAATGATAAAA+AGG | - | chr1.3:5619847-5619866 | None:intergenic | 25.0% |
| ! | TTATAAAAAACAGATGAAGG+AGG | - | chr1.3:5619050-5619069 | None:intergenic | 25.0% |
| ! | TTCTCCATATTTATCTCAAT+GGG | - | chr1.3:5621827-5621846 | None:intergenic | 25.0% |
| ! | TTGAATATTTATTGTGCATG+TGG | + | chr1.3:5622795-5622814 | MS.gene051637:intron | 25.0% |
| !! | AAGGCATGAAATTAGTTTAA+AGG | + | chr1.3:5620261-5620280 | MS.gene051637:intron | 25.0% |
| !! | ACATTTAGGTTTACTATGTA+AGG | + | chr1.3:5619628-5619647 | MS.gene051637:intron | 25.0% |
| !! | AGGCATGAAATTAGTTTAAA+GGG | + | chr1.3:5620262-5620281 | MS.gene051637:intron | 25.0% |
| !! | ATTAGAGTTCTAACAGAATT+TGG | + | chr1.3:5621323-5621342 | MS.gene051637:intron | 25.0% |
| !! | CATTTAGGTTTACTATGTAA+GGG | + | chr1.3:5619629-5619648 | MS.gene051637:intron | 25.0% |
| !! | GAGAATATAAACATGCTTTT+GGG | + | chr1.3:5619729-5619748 | MS.gene051637:intron | 25.0% |
| !! | GTATACACAATTAAGCATTT+TGG | + | chr1.3:5618714-5618733 | MS.gene051637:CDS | 25.0% |
| !! | TCTAGCTTACAATATCATTT+CGG | + | chr1.3:5622119-5622138 | MS.gene051637:intron | 25.0% |
| !! | TGAGAATATAAACATGCTTT+TGG | + | chr1.3:5619728-5619747 | MS.gene051637:intron | 25.0% |
| !!! | AGGTTCTCAACTATTTTAAT+AGG | - | chr1.3:5622421-5622440 | None:intergenic | 25.0% |
| !!! | ATTGACTTTTGTGAAATGTT+AGG | - | chr1.3:5620358-5620377 | None:intergenic | 25.0% |
| !!! | ATTTACTTTTACTGCATGTT+CGG | + | chr1.3:5620051-5620070 | MS.gene051637:intron | 25.0% |
| !!! | GAGGTTTTGATGAATTTTTT+TGG | + | chr1.3:5619249-5619268 | MS.gene051637:intron | 25.0% |
| !!! | GATGAATTTTTTTGGGTTAT+AGG | + | chr1.3:5619257-5619276 | MS.gene051637:intron | 25.0% |
| !!! | TGAGAGTCGTTTATTTTTAT+AGG | + | chr1.3:5623678-5623697 | MS.gene051637:intron | 25.0% |
| !!! | TTCTCGAGTTATTGTTATTT+CGG | + | chr1.3:5623443-5623462 | MS.gene051637:intron | 25.0% |
| AAATATTAGGCTATGAACAG+AGG | - | chr1.3:5620303-5620322 | None:intergenic | 30.0% | |
| AACTAAGGAAAGACTTATGA+GGG | + | chr1.3:5619596-5619615 | MS.gene051637:intron | 30.0% | |
| AAGTTCCACTAAACTAATAG+CGG | + | chr1.3:5619508-5619527 | MS.gene051637:intron | 30.0% | |
| AATTCTAACAGAATCTGGAA+CGG | + | chr1.3:5620469-5620488 | MS.gene051637:intron | 30.0% | |
| AGATATCTGGCTATAAATTG+TGG | - | chr1.3:5620980-5620999 | None:intergenic | 30.0% | |
| AGGAAAAAATAAGATCACTC+AGG | + | chr1.3:5619914-5619933 | MS.gene051637:intron | 30.0% | |
| AGGAACATAAAAGCAATCTT+AGG | - | chr1.3:5618918-5618937 | None:intergenic | 30.0% | |
| ATATAAGTGTCCATCCATTT+AGG | - | chr1.3:5620033-5620052 | None:intergenic | 30.0% | |
| ATCTTAGGAACTCTTTCAAA+AGG | - | chr1.3:5618903-5618922 | None:intergenic | 30.0% | |
| ATTAGCAAGTAGTCTTCTTT+CGG | - | chr1.3:5623867-5623886 | None:intergenic | 30.0% | |
| CAAAATATACATACCTGACT+AGG | - | chr1.3:5619083-5619102 | None:intergenic | 30.0% | |
| CCTCAAAACAATCATAAACA+AGG | - | chr1.3:5619233-5619252 | None:intergenic | 30.0% | |
| CTAGCTTACAATATCATTTC+GGG | + | chr1.3:5622120-5622139 | MS.gene051637:intron | 30.0% | |
| CTGAAGAAGGAAAATCAAAA+GGG | + | chr1.3:5618622-5618641 | MS.gene051637:CDS | 30.0% | |
| GAATTCACCATATCTAACAA+AGG | - | chr1.3:5624433-5624452 | None:intergenic | 30.0% | |
| GAGTTTCCAATATTGTGTAT+GGG | + | chr1.3:5620878-5620897 | MS.gene051637:intron | 30.0% | |
| GATGTAGGGAGAAAAAAATT+AGG | + | chr1.3:5621363-5621382 | MS.gene051637:intron | 30.0% | |
| GCTTAAGTTTAGAGGAAATT+TGG | - | chr1.3:5620539-5620558 | None:intergenic | 30.0% | |
| GGAAAAAATAAGATCACTCA+GGG | + | chr1.3:5619915-5619934 | MS.gene051637:intron | 30.0% | |
| GTTCTCCATATTTATCTCAA+TGG | - | chr1.3:5621828-5621847 | None:intergenic | 30.0% | |
| TAAAGTTAGTTAGTGCTTGT+AGG | + | chr1.3:5620435-5620454 | MS.gene051637:intron | 30.0% | |
| TAGAACTACATAAGGAACTA+AGG | + | chr1.3:5619581-5619600 | MS.gene051637:intron | 30.0% | |
| TATTAAGTGAAGGACATGAT+TGG | + | chr1.3:5620559-5620578 | MS.gene051637:intron | 30.0% | |
| TCAAGTACAATGTTGTCAAA+TGG | - | chr1.3:5619544-5619563 | None:intergenic | 30.0% | |
| TCTGAAGAAGGAAAATCAAA+AGG | + | chr1.3:5618621-5618640 | MS.gene051637:CDS | 30.0% | |
| TCTTAGGAACTCTTTCAAAA+GGG | - | chr1.3:5618902-5618921 | None:intergenic | 30.0% | |
| TGAGTGATAAAGAACTTCTT+TGG | + | chr1.3:5618844-5618863 | MS.gene051637:CDS | 30.0% | |
| TTAACTAAGTCAGCAATTGA+GGG | - | chr1.3:5621930-5621949 | None:intergenic | 30.0% | |
| TTACTTTCTGATTTCTGTTC+TGG | + | chr1.3:5619314-5619333 | MS.gene051637:intron | 30.0% | |
| TTCGAACTTAGGATAAAATG+CGG | - | chr1.3:5624146-5624165 | None:intergenic | 30.0% | |
| ! | CATTAAAACGTTGTCATTTC+AGG | - | chr1.3:5622266-5622285 | None:intergenic | 30.0% |
| ! | GAGGGTATACAAAAACATTT+AGG | + | chr1.3:5619614-5619633 | MS.gene051637:intron | 30.0% |
| ! | GCTTTTATGTTCCTTACTAA+AGG | + | chr1.3:5618924-5618943 | MS.gene051637:CDS | 30.0% |
| ! | TAAAACATTGTCATTTGGTG+AGG | + | chr1.3:5621494-5621513 | MS.gene051637:intron | 30.0% |
| !! | ATTTTGTAACGTTGACTAGA+GGG | - | chr1.3:5624060-5624079 | None:intergenic | 30.0% |
| !! | CCTTGTTTATGATTGTTTTG+AGG | + | chr1.3:5619230-5619249 | MS.gene051637:intron | 30.0% |
| !! | TCTCGAGTTATTGTTATTTC+GGG | + | chr1.3:5623444-5623463 | MS.gene051637:intron | 30.0% |
| !!! | TTTTTTTGGGTTATAGGTTG+TGG | + | chr1.3:5619263-5619282 | MS.gene051637:intron | 30.0% |
| AAAACACAACACATAGTGCA+AGG | - | chr1.3:5618683-5618702 | None:intergenic | 35.0% | |
| AAAACTGTAGGGAGAAGATT+AGG | + | chr1.3:5620501-5620520 | MS.gene051637:intron | 35.0% | |
| AAATCCAAATTCAGCTTCGT+CGG | + | chr1.3:5623980-5623999 | MS.gene051637:CDS | 35.0% | |
| AAATTCAGATCACTTGGTCA+AGG | + | chr1.3:5620856-5620875 | MS.gene051637:intron | 35.0% | |
| AACCATGTTAACCATTCAAG+CGG | + | chr1.3:5624210-5624229 | MS.gene051637:CDS | 35.0% | |
| AACGTTACAAAATGGCGTAA+AGG | + | chr1.3:5624067-5624086 | MS.gene051637:CDS | 35.0% | |
| ACACCATATCTTCACCATAT+GGG | - | chr1.3:5623558-5623577 | None:intergenic | 35.0% | |
| ACAGATAACAGACCATGAAT+AGG | - | chr1.3:5619987-5620006 | None:intergenic | 35.0% | |
| ACCAATTGCTGACATAGTTA+AGG | + | chr1.3:5620408-5620427 | MS.gene051637:intron | 35.0% | |
| ACCTTAACTAAGTCAGCAAT+TGG | - | chr1.3:5621271-5621290 | None:intergenic | 35.0% | |
| ACCTTAACTATGTCAGCAAT+TGG | - | chr1.3:5620412-5620431 | None:intergenic | 35.0% | |
| ACGTATAATTAGGTCGTATG+TGG | - | chr1.3:5619792-5619811 | None:intergenic | 35.0% | |
| ACTAGACTGAATTTGTAGAG+AGG | - | chr1.3:5623944-5623963 | None:intergenic | 35.0% | |
| ACTTGTCATGTAACAATGAC+GGG | - | chr1.3:5619357-5619376 | None:intergenic | 35.0% | |
| AGGTTAATATCAGCATGCAA+TGG | - | chr1.3:5620631-5620650 | None:intergenic | 35.0% | |
| AGTACAATGTTGTCAAATGG+TGG | - | chr1.3:5619541-5619560 | None:intergenic | 35.0% | |
| AGTAGACTCAGATCATTTCA+AGG | + | chr1.3:5621536-5621555 | MS.gene051637:intron | 35.0% | |
| ATAAGATCACTCAGGGATTA+AGG | + | chr1.3:5619922-5619941 | MS.gene051637:intron | 35.0% | |
| ATAAGTGTGCAGAAACATGT+TGG | + | chr1.3:5619762-5619781 | MS.gene051637:intron | 35.0% | |
| ATACCTAAAATGCCCTTACT+AGG | - | chr1.3:5622395-5622414 | None:intergenic | 35.0% | |
| ATTGTACTTGATCAGTTCAC+CGG | + | chr1.3:5619553-5619572 | MS.gene051637:intron | 35.0% | |
| CAATAGAATAAACCGCTCAT+TGG | - | chr1.3:5623906-5623925 | None:intergenic | 35.0% | |
| CACTTGTCATGTAACAATGA+CGG | - | chr1.3:5619358-5619377 | None:intergenic | 35.0% | |
| CAGTAATTGTTGCCTATTCA+TGG | + | chr1.3:5619972-5619991 | MS.gene051637:intron | 35.0% | |
| CATATCTAACAAAGGTTCCA+AGG | - | chr1.3:5624425-5624444 | None:intergenic | 35.0% | |
| CATCACACTTTATGACCAAA+TGG | - | chr1.3:5620593-5620612 | None:intergenic | 35.0% | |
| CATGATACAAGTTTGAGAGA+AGG | + | chr1.3:5619894-5619913 | MS.gene051637:intron | 35.0% | |
| CCAACTAGGTACGTATAATT+AGG | - | chr1.3:5619802-5619821 | None:intergenic | 35.0% | |
| CCACATATGTAAATGAGACA+GGG | + | chr1.3:5621032-5621051 | MS.gene051637:intron | 35.0% | |
| CCACATATGTAAATGAGACA+TGG | + | chr1.3:5621032-5621051 | MS.gene051637:intron | 35.0% | |
| CCATGTCTCATTTACATATG+TGG | - | chr1.3:5621035-5621054 | None:intergenic | 35.0% | |
| CCTAATTATACGTACCTAGT+TGG | + | chr1.3:5619799-5619818 | MS.gene051637:intron | 35.0% | |
| CCTTAACTAAGTCAGCAATT+GGG | - | chr1.3:5621270-5621289 | None:intergenic | 35.0% | |
| CGACGAGTTAAATTTCTCAA+GGG | + | chr1.3:5619676-5619695 | MS.gene051637:intron | 35.0% | |
| CGATAAGTGATTGACAACAT+TGG | + | chr1.3:5620830-5620849 | MS.gene051637:intron | 35.0% | |
| CTACAGTATTGTTCGAACTT+AGG | - | chr1.3:5624157-5624176 | None:intergenic | 35.0% | |
| CTAGACTGAATTTGTAGAGA+GGG | - | chr1.3:5623943-5623962 | None:intergenic | 35.0% | |
| CTCTAGTCAACGTTACAAAA+TGG | + | chr1.3:5624059-5624078 | MS.gene051637:CDS | 35.0% | |
| CTTAAAAGCCTACATCAAAC+AGG | + | chr1.3:5621239-5621258 | MS.gene051637:intron | 35.0% | |
| CTTAAAAGTCTACAGCAAAC+AGG | + | chr1.3:5620380-5620399 | MS.gene051637:intron | 35.0% | |
| CTTAACTAAGTCAGCAATTG+AGG | - | chr1.3:5621269-5621288 | None:intergenic | 35.0% | |
| CTTAACTAAGTCAGCAATTG+GGG | - | chr1.3:5621269-5621288 | None:intergenic | 35.0% | |
| CTTGGAACCTTTGTTAGATA+TGG | + | chr1.3:5624423-5624442 | MS.gene051637:CDS | 35.0% | |
| GAACTAAGGAAAGACTTATG+AGG | + | chr1.3:5619595-5619614 | MS.gene051637:intron | 35.0% | |
| GATATGAATAGCATTTGGGT+AGG | + | chr1.3:5623384-5623403 | MS.gene051637:intron | 35.0% | |
| GGACAAGCTATAAAACTGTA+GGG | + | chr1.3:5620490-5620509 | MS.gene051637:intron | 35.0% | |
| GGAGTTTCCAATATTGTGTA+TGG | + | chr1.3:5620877-5620896 | MS.gene051637:intron | 35.0% | |
| GGCTGATATGCACTATATTA+TGG | + | chr1.3:5619284-5619303 | MS.gene051637:intron | 35.0% | |
| GGTTAATGTTTAGTGCACTA+TGG | - | chr1.3:5622329-5622348 | None:intergenic | 35.0% | |
| GTCTGTTATCTGTTTGTAGA+TGG | + | chr1.3:5619994-5620013 | MS.gene051637:intron | 35.0% | |
| GTTATCTGTTTGTAGATGGT+GGG | + | chr1.3:5619998-5620017 | MS.gene051637:intron | 35.0% | |
| TAACCTGTGAAGAATAAGGA+CGG | + | chr1.3:5620645-5620664 | MS.gene051637:intron | 35.0% | |
| TAGACTCAGATCATTTCAAG+TGG | + | chr1.3:5621538-5621557 | MS.gene051637:intron | 35.0% | |
| TCATCACTTGTTCAAGCTAA+GGG | + | chr1.3:5623205-5623224 | MS.gene051637:intron | 35.0% | |
| TCCACATATGTAAATGAGAC+AGG | + | chr1.3:5621031-5621050 | MS.gene051637:intron | 35.0% | |
| TCGACGAGTTAAATTTCTCA+AGG | + | chr1.3:5619675-5619694 | MS.gene051637:intron | 35.0% | |
| TCTGTGTTATCAATCTTGGA+TGG | - | chr1.3:5622749-5622768 | None:intergenic | 35.0% | |
| TGAATTTGCAACAACCAACT+AGG | - | chr1.3:5619816-5619835 | None:intergenic | 35.0% | |
| TGCGGATATGAATAGCATTT+GGG | + | chr1.3:5623380-5623399 | MS.gene051637:intron | 35.0% | |
| TGGTAGAAATTCAGATCACT+TGG | + | chr1.3:5620850-5620869 | MS.gene051637:intron | 35.0% | |
| TGTTATCTGTTTGTAGATGG+TGG | + | chr1.3:5619997-5620016 | MS.gene051637:intron | 35.0% | |
| TTAACTAAGTCAGCAATTGG+GGG | - | chr1.3:5621268-5621287 | None:intergenic | 35.0% | |
| TTAAGAATCGGTAAAGACTG+CGG | + | chr1.3:5623362-5623381 | MS.gene051637:intron | 35.0% | |
| TTATCTGTTTGTAGATGGTG+GGG | + | chr1.3:5619999-5620018 | MS.gene051637:intron | 35.0% | |
| TTCATCACTTGTTCAAGCTA+AGG | + | chr1.3:5623204-5623223 | MS.gene051637:intron | 35.0% | |
| TTGATACCTAGAGACTCATA+TGG | - | chr1.3:5622089-5622108 | None:intergenic | 35.0% | |
| ! | CTATACCGCTATTAGTTTAG+TGG | - | chr1.3:5619516-5619535 | None:intergenic | 35.0% |
| ! | GCTCTTTTTGCGTTAAGAAT+CGG | + | chr1.3:5623350-5623369 | MS.gene051637:intron | 35.0% |
| ! | TGTCATTTGGTGAGGAAAAT+TGG | + | chr1.3:5622164-5622183 | MS.gene051637:intron | 35.0% |
| ! | TGTGAAGAATAATGGTGGAA+AGG | + | chr1.3:5620178-5620197 | MS.gene051637:intron | 35.0% |
| ! | TTGAAATCCTTAAAGTGTCC+CGG | - | chr1.3:5621075-5621094 | None:intergenic | 35.0% |
| ! | TTGTGGCCTTGATGAAATAA+AGG | - | chr1.3:5620113-5620132 | None:intergenic | 35.0% |
| ! | TTTCAAGTGGACTCTTATGA+TGG | + | chr1.3:5621551-5621570 | MS.gene051637:intron | 35.0% |
| ! | TTTTACTGCATGTTCGGATT+TGG | + | chr1.3:5620057-5620076 | MS.gene051637:intron | 35.0% |
| ! | TTTTCCAAATGTAGCTGGAT+GGG | - | chr1.3:5624290-5624309 | None:intergenic | 35.0% |
| ! | TTTTGTTGCAGTTCTCTGTT+GGG | - | chr1.3:5623640-5623659 | None:intergenic | 35.0% |
| ! | TTTTTCCAAATGTAGCTGGA+TGG | - | chr1.3:5624291-5624310 | None:intergenic | 35.0% |
| ! | TTTTTGTTGCAGTTCTCTGT+TGG | - | chr1.3:5623641-5623660 | None:intergenic | 35.0% |
| !! | ACGCAAAAAGAGCATCTTTA+TGG | - | chr1.3:5623343-5623362 | None:intergenic | 35.0% |
| !! | CATTTTGTAACGTTGACTAG+AGG | - | chr1.3:5624061-5624080 | None:intergenic | 35.0% |
| !! | CTCAATTGCTGACTTAGTTA+AGG | + | chr1.3:5621929-5621948 | MS.gene051637:intron | 35.0% |
| !! | TAGAGTTAGTTTGTGCTTGT+AGG | + | chr1.3:5621294-5621313 | MS.gene051637:intron | 35.0% |
| !! | TCTGTTTTTCCAAATGTAGC+TGG | - | chr1.3:5624295-5624314 | None:intergenic | 35.0% |
| !! | TGTGTTTGTTGAGTTGAGAT+TGG | + | chr1.3:5623110-5623129 | MS.gene051637:intron | 35.0% |
| !! | TTTGACTTTTGACAACCTTG+CGG | - | chr1.3:5621389-5621408 | None:intergenic | 35.0% |
| !! | TTTTGTAACGTTGACTAGAG+GGG | - | chr1.3:5624059-5624078 | None:intergenic | 35.0% |
| !!! | CTCTTTTTTTTACCTCATCG+TGG | + | chr1.3:5622523-5622542 | MS.gene051637:intron | 35.0% |
| !!! | GAGATTGGTTTTGGTTCTTT+AGG | + | chr1.3:5623125-5623144 | MS.gene051637:intron | 35.0% |
| !!! | GAGTTTTTTGATAGAGTTCG+TGG | + | chr1.3:5624325-5624344 | MS.gene051637:CDS | 35.0% |
| !!! | TGTTGAGTTGAGATTGGTTT+TGG | + | chr1.3:5623116-5623135 | MS.gene051637:intron | 35.0% |
| !!! | TTGGTTTTGGTTCTTTAGGA+TGG | + | chr1.3:5623129-5623148 | MS.gene051637:intron | 35.0% |
| !!! | TTTTTTGATAGAGTTCGTGG+AGG | + | chr1.3:5624328-5624347 | MS.gene051637:CDS | 35.0% |
| AACAGATGAAGGAGGAAACT+TGG | - | chr1.3:5619042-5619061 | None:intergenic | 40.0% | |
| ACAAGTGATGAACCTAGGTT+AGG | - | chr1.3:5623196-5623215 | None:intergenic | 40.0% | |
| ACACAGGCTACAAAGATGTA+GGG | + | chr1.3:5621349-5621368 | MS.gene051637:intron | 40.0% | |
| ACCATGTTAACCATTCAAGC+GGG | + | chr1.3:5624211-5624230 | MS.gene051637:CDS | 40.0% | |
| AGAGCAACCAAAAAGTGGTT+TGG | - | chr1.3:5623581-5623600 | None:intergenic | 40.0% | |
| ATGACAAGTGTTATCAGTCG+CGG | + | chr1.3:5619368-5619387 | MS.gene051637:intron | 40.0% | |
| ATTACTGCCATGTCTCTTCT+TGG | - | chr1.3:5619959-5619978 | None:intergenic | 40.0% | |
| CCCTGTCTCATTTACATATG+TGG | - | chr1.3:5621637-5621656 | None:intergenic | 40.0% | |
| CGGACAAGCTATAAAACTGT+AGG | + | chr1.3:5620489-5620508 | MS.gene051637:intron | 40.0% | |
| CTATGATTCTACCTAACTCG+CGG | - | chr1.3:5620083-5620102 | None:intergenic | 40.0% | |
| CTGCGGATATGAATAGCATT+TGG | + | chr1.3:5623379-5623398 | MS.gene051637:intron | 40.0% | |
| CTTGAACAAGTGATGAACCT+AGG | - | chr1.3:5623201-5623220 | None:intergenic | 40.0% | |
| GACACCATATCTTCACCATA+TGG | - | chr1.3:5623559-5623578 | None:intergenic | 40.0% | |
| GACTAAGAGCAACCAAAAAG+TGG | - | chr1.3:5623586-5623605 | None:intergenic | 40.0% | |
| GAGAAAAAAATTAGGCCGCA+AGG | + | chr1.3:5621371-5621390 | MS.gene051637:intron | 40.0% | |
| GCTAGTCCCATACACAATAT+TGG | - | chr1.3:5620887-5620906 | None:intergenic | 40.0% | |
| GCTTGAATGGTTAACATGGT+TGG | - | chr1.3:5624211-5624230 | None:intergenic | 40.0% | |
| GTAGAGAGGGATACATGATT+CGG | - | chr1.3:5623930-5623949 | None:intergenic | 40.0% | |
| GTGTTATCAATCTTGGATGG+TGG | - | chr1.3:5622746-5622765 | None:intergenic | 40.0% | |
| GTTCGAACAATACTGTAGAC+CGG | + | chr1.3:5624159-5624178 | MS.gene051637:CDS | 40.0% | |
| TAACAGAATTTGGCAGACAC+AGG | + | chr1.3:5621333-5621352 | MS.gene051637:intron | 40.0% | |
| TAAGAGACAAATCCCTAGTC+AGG | + | chr1.3:5619067-5619086 | MS.gene051637:CDS | 40.0% | |
| TACAGTTAATCCTTGCTGAG+AGG | - | chr1.3:5622571-5622590 | None:intergenic | 40.0% | |
| TACTTGACATCTCCAATGAG+CGG | + | chr1.3:5623891-5623910 | MS.gene051637:CDS | 40.0% | |
| TCATGACCATATGAGTCTCT+AGG | + | chr1.3:5622080-5622099 | MS.gene051637:intron | 40.0% | |
| TCCACATCTTCATCCAATGT+CGG | - | chr1.3:5623508-5623527 | None:intergenic | 40.0% | |
| TCTTGTTCAGATTGCTGAGT+GGG | + | chr1.3:5623820-5623839 | MS.gene051637:intron | 40.0% | |
| TGCAAATCGTGTCCTAGTAA+GGG | + | chr1.3:5622380-5622399 | MS.gene051637:intron | 40.0% | |
| TGCACTAAACATTAACCTCG+CGG | + | chr1.3:5622332-5622351 | MS.gene051637:intron | 40.0% | |
| TTATGGATCAGATTTGACGG+AGG | - | chr1.3:5618822-5618841 | None:intergenic | 40.0% | |
| TTCTTGTTCAGATTGCTGAG+TGG | + | chr1.3:5623819-5623838 | MS.gene051637:intron | 40.0% | |
| TTGATACCTAGAGTCTCATC+TGG | - | chr1.3:5621427-5621446 | None:intergenic | 40.0% | |
| TTGTACTTGATCAGTTCACC+GGG | + | chr1.3:5619554-5619573 | MS.gene051637:intron | 40.0% | |
| TTTCAAAAACCTCTCCCAGA+CGG | - | chr1.3:5618967-5618986 | None:intergenic | 40.0% | |
| TTTCAAGGAGACTCGTATGA+TGG | + | chr1.3:5622213-5622232 | MS.gene051637:intron | 40.0% | |
| TTTGGGTAGGATAACATAGC+TGG | + | chr1.3:5623397-5623416 | MS.gene051637:intron | 40.0% | |
| ! | AAAATGCCAAGGAGGTATAG+TGG | - | chr1.3:5622705-5622724 | None:intergenic | 40.0% |
| ! | AAAATTTGCTCCTAGTGCCT+TGG | + | chr1.3:5624405-5624424 | MS.gene051637:CDS | 40.0% |
| ! | AAATGCCAAGGAGGTATAGT+GGG | - | chr1.3:5622704-5622723 | None:intergenic | 40.0% |
| ! | ACTATACCTCCTTGGCATTT+TGG | + | chr1.3:5622704-5622723 | MS.gene051637:intron | 40.0% |
| ! | ACTTCTTTGGAGAGCTTCTT+TGG | + | chr1.3:5618857-5618876 | MS.gene051637:CDS | 40.0% |
| ! | CTATACCTCCTTGGCATTTT+GGG | + | chr1.3:5622705-5622724 | MS.gene051637:intron | 40.0% |
| ! | CTCAGTATCATCGCATTTTG+TGG | - | chr1.3:5620130-5620149 | None:intergenic | 40.0% |
| ! | GGAAACTTGGCTTGATAAGA+AGG | - | chr1.3:5619029-5619048 | None:intergenic | 40.0% |
| ! | GTACCGCCTTTATTTCATCA+AGG | + | chr1.3:5620104-5620123 | MS.gene051637:intron | 40.0% |
| ! | TATACCTCCTTGGCATTTTG+GGG | + | chr1.3:5622706-5622725 | MS.gene051637:intron | 40.0% |
| ! | TATCTGTTTGTAGATGGTGG+GGG | + | chr1.3:5620000-5620019 | MS.gene051637:intron | 40.0% |
| ! | TGAAATCCTTAAAGTGTCCC+GGG | - | chr1.3:5621074-5621093 | None:intergenic | 40.0% |
| ! | TGGCCTTGATGAAATAAAGG+CGG | - | chr1.3:5620110-5620129 | None:intergenic | 40.0% |
| ! | TGTCATTTCAGGCATCTCAA+GGG | - | chr1.3:5622255-5622274 | None:intergenic | 40.0% |
| ! | TTGGCTTGATAAGAAGGAGT+TGG | - | chr1.3:5619023-5619042 | None:intergenic | 40.0% |
| ! | TTGTCATTTCAGGCATCTCA+AGG | - | chr1.3:5622256-5622275 | None:intergenic | 40.0% |
| ! | TTTGACTTTCGACAACTGTG+CGG | - | chr1.3:5622051-5622070 | None:intergenic | 40.0% |
| ! | TTTGATGATCCTGGTCCATA+CGG | + | chr1.3:5624007-5624026 | MS.gene051637:CDS | 40.0% |
| !! | AAGTGTTGATGTGTCAAGTG+TGG | + | chr1.3:5623473-5623492 | MS.gene051637:intron | 40.0% |
| !! | AATTCCTTAAAGAGTGTCCC+GGG | - | chr1.3:5621676-5621695 | None:intergenic | 40.0% |
| !! | AGTGTTGATGTGTCAAGTGT+GGG | + | chr1.3:5623474-5623493 | MS.gene051637:intron | 40.0% |
| !! | ATGGTGTCCAAACCACTTTT+TGG | + | chr1.3:5623571-5623590 | MS.gene051637:intron | 40.0% |
| !! | CCCAATTGCTGACTTAGTTA+AGG | + | chr1.3:5621267-5621286 | MS.gene051637:intron | 40.0% |
| !! | CTTATGTAGTTCTAGCAACC+CGG | - | chr1.3:5619575-5619594 | None:intergenic | 40.0% |
| !! | GAATTCCTTAAAGAGTGTCC+CGG | - | chr1.3:5621677-5621696 | None:intergenic | 40.0% |
| !! | TCTGGGAGAGGTTTTTGAAA+GGG | + | chr1.3:5618967-5618986 | MS.gene051637:CDS | 40.0% |
| !! | TGATTGGTTTGACAGCCATT+TGG | + | chr1.3:5620575-5620594 | MS.gene051637:intron | 40.0% |
| !!! | GCATTTTGGAATTCAGAGTG+TGG | + | chr1.3:5618728-5618747 | MS.gene051637:CDS | 40.0% |
| !!! | TGCATCTGTTGCTTTTGCTT+AGG | + | chr1.3:5623753-5623772 | MS.gene051637:intron | 40.0% |
| !!! | TGTCCTAGTAAGGGCATTTT+AGG | + | chr1.3:5622389-5622408 | MS.gene051637:intron | 40.0% |
| AAATCGGAGCATAACTTGGG+TGG | + | chr1.3:5624246-5624265 | MS.gene051637:CDS | 45.0% | |
| AAATGCTAACAAGTGCCTCC+GGG | - | chr1.3:5621804-5621823 | None:intergenic | 45.0% | |
| AATGGCGTAAAGGCTCTCAA+TGG | + | chr1.3:5624077-5624096 | MS.gene051637:CDS | 45.0% | |
| AGTTCTCTGTTGGGTCATGA+GGG | - | chr1.3:5623631-5623650 | None:intergenic | 45.0% | |
| ATGCGGTGTCTTCCACAATA+TGG | - | chr1.3:5624129-5624148 | None:intergenic | 45.0% | |
| ATTGCAACATCCTCTCAGCA+AGG | + | chr1.3:5622558-5622577 | MS.gene051637:intron | 45.0% | |
| CCATGTTAACCATTCAAGCG+GGG | + | chr1.3:5624212-5624231 | MS.gene051637:CDS | 45.0% | |
| CGGGTTGCTAGAACTACATA+AGG | + | chr1.3:5619573-5619592 | MS.gene051637:intron | 45.0% | |
| CTAAAAGCTGCCAACCAAGT+CGG | - | chr1.3:5621854-5621873 | None:intergenic | 45.0% | |
| CTGCAAATCGTGTCCTAGTA+AGG | + | chr1.3:5622379-5622398 | MS.gene051637:intron | 45.0% | |
| CTTGTTCAGATTGCTGAGTG+GGG | + | chr1.3:5623821-5623840 | MS.gene051637:intron | 45.0% | |
| GAAATGCTAACAAGTGCCTC+CGG | - | chr1.3:5621805-5621824 | None:intergenic | 45.0% | |
| GACACAGGCTACAAAGATGT+AGG | + | chr1.3:5621348-5621367 | MS.gene051637:intron | 45.0% | |
| GAGCAGCTATACAAGTGAGA+GGG | + | chr1.3:5623532-5623551 | MS.gene051637:intron | 45.0% | |
| GGATGAAATTGACCACGATG+AGG | - | chr1.3:5622538-5622557 | None:intergenic | 45.0% | |
| GGCAAATCGGAGCATAACTT+GGG | + | chr1.3:5624243-5624262 | MS.gene051637:CDS | 45.0% | |
| GGTGTCTTCCACAATATGGA+CGG | - | chr1.3:5624125-5624144 | None:intergenic | 45.0% | |
| TAAAAGCTGCCAACCAAGTC+GGG | - | chr1.3:5621853-5621872 | None:intergenic | 45.0% | |
| TACTACCCACTATACCTCCT+TGG | + | chr1.3:5622696-5622715 | MS.gene051637:intron | 45.0% | |
| TCAGAACCAGATGAGACTCT+AGG | + | chr1.3:5621418-5621437 | MS.gene051637:intron | 45.0% | |
| TCCGACATTGGATGAAGATG+TGG | + | chr1.3:5623504-5623523 | MS.gene051637:intron | 45.0% | |
| TGAGCAGCTATACAAGTGAG+AGG | + | chr1.3:5623531-5623550 | MS.gene051637:intron | 45.0% | |
| TGGCAAATCGGAGCATAACT+TGG | + | chr1.3:5624242-5624261 | MS.gene051637:CDS | 45.0% | |
| TGTCCGTCCTTATTCTTCAC+AGG | - | chr1.3:5620651-5620670 | None:intergenic | 45.0% | |
| TGTGAAGAATAAGGACGGAC+AGG | + | chr1.3:5620650-5620669 | MS.gene051637:intron | 45.0% | |
| TTCAAAAACCTCTCCCAGAC+GGG | - | chr1.3:5618966-5618985 | None:intergenic | 45.0% | |
| TTGCTGAGAGGATGTTGCAA+TGG | - | chr1.3:5622559-5622578 | None:intergenic | 45.0% | |
| ! | AACAAAGGTTCCAAGGCACT+AGG | - | chr1.3:5624418-5624437 | None:intergenic | 45.0% |
| ! | GAAATCCTTAAAGTGTCCCG+GGG | - | chr1.3:5621073-5621092 | None:intergenic | 45.0% |
| ! | GTCTGGGAGAGGTTTTTGAA+AGG | + | chr1.3:5618966-5618985 | MS.gene051637:CDS | 45.0% |
| ! | GTTCTGTCACTTCCTAACCT+AGG | + | chr1.3:5623181-5623200 | MS.gene051637:intron | 45.0% |
| ! | TTGCTAGAGAGAGAAGCACA+AGG | - | chr1.3:5622449-5622468 | None:intergenic | 45.0% |
| !! | AACGTGCTGGTTTGGAACAA+TGG | + | chr1.3:5618790-5618809 | MS.gene051637:CDS | 45.0% |
| !! | ATCTGTTTGTAGATGGTGGG+GGG | + | chr1.3:5620001-5620020 | MS.gene051637:intron | 45.0% |
| !! | ATTCCTTAAAGAGTGTCCCG+GGG | - | chr1.3:5621675-5621694 | None:intergenic | 45.0% |
| !! | TCTTGGATGGTGGAGCAAAA+TGG | - | chr1.3:5622736-5622755 | None:intergenic | 45.0% |
| !! | TGTTGAAGAACGTGCTGGTT+TGG | + | chr1.3:5618782-5618801 | MS.gene051637:CDS | 45.0% |
| AAAAGCTGCCAACCAAGTCG+GGG | - | chr1.3:5621852-5621871 | None:intergenic | 50.0% | |
| AAAAGCTGCCGACGAAGTCA+GGG | - | chr1.3:5621190-5621209 | None:intergenic | 50.0% | |
| AACAGAGGTCTGCACAGAGA+TGG | - | chr1.3:5622479-5622498 | None:intergenic | 50.0% | |
| AATGCTAACAAGTGCCTCCG+GGG | - | chr1.3:5621803-5621822 | None:intergenic | 50.0% | |
| ACTGCCATGTCTCTTCTTGG+AGG | - | chr1.3:5619956-5619975 | None:intergenic | 50.0% | |
| AGCTCTGCAGCAAGAAACAG+AGG | - | chr1.3:5622494-5622513 | None:intergenic | 50.0% | |
| AGGACGCTACAACCCAAACA+TGG | + | chr1.3:5624033-5624052 | MS.gene051637:CDS | 50.0% | |
| AGGGAGAAGATTAGGCAGCA+TGG | + | chr1.3:5620509-5620528 | MS.gene051637:intron | 50.0% | |
| AGTCTACCGTGATGATCCCT+GGG | + | chr1.3:5623602-5623621 | MS.gene051637:intron | 50.0% | |
| AGTCTAGTGCTAAAACCGCG+AGG | - | chr1.3:5622350-5622369 | None:intergenic | 50.0% | |
| ATATGGAGAACTCCCCGACT+TGG | + | chr1.3:5621837-5621856 | MS.gene051637:intron | 50.0% | |
| CAAGCTTGCCGTCCATATTG+TGG | + | chr1.3:5624114-5624133 | MS.gene051637:CDS | 50.0% | |
| CAGTTCTCTGTTGGGTCATG+AGG | - | chr1.3:5623632-5623651 | None:intergenic | 50.0% | |
| CCAGCACGTTCTTCAACACA+TGG | - | chr1.3:5618780-5618799 | None:intergenic | 50.0% | |
| CCATGTGTTGAAGAACGTGC+TGG | + | chr1.3:5618777-5618796 | MS.gene051637:CDS | 50.0% | |
| CCCCGCTTGAATGGTTAACA+TGG | - | chr1.3:5624215-5624234 | None:intergenic | 50.0% | |
| GAAGTCAGGGAGTTCTCCAT+GGG | - | chr1.3:5621177-5621196 | None:intergenic | 50.0% | |
| GACACGATTTGCAGCATCTG+TGG | - | chr1.3:5622373-5622392 | None:intergenic | 50.0% | |
| GAGGCAACGGTCCTTTAGTA+AGG | - | chr1.3:5618938-5618957 | None:intergenic | 50.0% | |
| GAGGGCTTCCTGTTTGATGT+AGG | - | chr1.3:5621912-5621931 | None:intergenic | 50.0% | |
| GCTTCCTCCAAGAAGAGACA+TGG | + | chr1.3:5619949-5619968 | MS.gene051637:intron | 50.0% | |
| GGAGCATAACTTGGGTGGAT+TGG | + | chr1.3:5624251-5624270 | MS.gene051637:CDS | 50.0% | |
| GGGCCCATATGGTGAAGATA+TGG | + | chr1.3:5623552-5623571 | MS.gene051637:intron | 50.0% | |
| GGGGTAACAGCCTAAATGGA+TGG | + | chr1.3:5620020-5620039 | MS.gene051637:intron | 50.0% | |
| GGTATGCTACAGCGCTATAG+CGG | - | chr1.3:5620788-5620807 | None:intergenic | 50.0% | |
| GTTCTCTGTTGGGTCATGAG+GGG | - | chr1.3:5623630-5623649 | None:intergenic | 50.0% | |
| TAAAAGCTGCCGACGAAGTC+AGG | - | chr1.3:5621191-5621210 | None:intergenic | 50.0% | |
| TACAAGTGAGAGGGCCCATA+TGG | + | chr1.3:5623541-5623560 | MS.gene051637:intron | 50.0% | |
| TAGTCTACCGTGATGATCCC+TGG | + | chr1.3:5623601-5623620 | MS.gene051637:intron | 50.0% | |
| TGACTAGAGGGGCCATGTTT+GGG | - | chr1.3:5624048-5624067 | None:intergenic | 50.0% | |
| TGCTCGTCGACATAACAAGC+CGG | - | chr1.3:5624181-5624200 | None:intergenic | 50.0% | |
| TTCAGATTGCTGAGTGGGGA+AGG | + | chr1.3:5623825-5623844 | MS.gene051637:intron | 50.0% | |
| TTGACTAGAGGGGCCATGTT+TGG | - | chr1.3:5624049-5624068 | None:intergenic | 50.0% | |
| TTGTAGCGTCCTCTTCCGTA+TGG | - | chr1.3:5624025-5624044 | None:intergenic | 50.0% | |
| ! | AGGGCTTTGGCATCTGAAGA+AGG | + | chr1.3:5618609-5618628 | MS.gene051637:CDS | 50.0% |
| ! | GAGAGAAGCACAAGGTTGAG+AGG | - | chr1.3:5622441-5622460 | None:intergenic | 50.0% |
| ! | GTCGGTGCATTTGATGATCC+TGG | + | chr1.3:5623998-5624017 | MS.gene051637:CDS | 50.0% |
| ! | TGCACCGACGAAGCTGAATT+TGG | - | chr1.3:5623987-5624006 | None:intergenic | 50.0% |
| !! | ACTTGGGTGGATTGGTCTAG+AGG | + | chr1.3:5624259-5624278 | MS.gene051637:CDS | 50.0% |
| !! | GTGGGTTAGAAGTCCGACAT+TGG | + | chr1.3:5623492-5623511 | MS.gene051637:intron | 50.0% |
| CAACACACTCCCCGCTTGAA+TGG | - | chr1.3:5624224-5624243 | None:intergenic | 55.0% | |
| CGAAGTCAGGGAGTTCTCCA+TGG | - | chr1.3:5621178-5621197 | None:intergenic | 55.0% | |
| GATCCTGGTCCATACGGAAG+AGG | + | chr1.3:5624013-5624032 | MS.gene051637:CDS | 55.0% | |
| GCACTCGTTAGCATCTCCCA+TGG | + | chr1.3:5621158-5621177 | MS.gene051637:intron | 55.0% | |
| GGAGAACTCCCTGACTTCGT+CGG | + | chr1.3:5621179-5621198 | MS.gene051637:intron | 55.0% | |
| GGGGGCTTCCTGTTTGATGT+AGG | - | chr1.3:5621250-5621269 | None:intergenic | 55.0% | |
| GGTCTTGCTAATGAGTGCCC+CGG | + | chr1.3:5621655-5621674 | MS.gene051637:intron | 55.0% | |
| GTCTTGCTAATGAGTGCCCC+GGG | + | chr1.3:5621656-5621675 | MS.gene051637:intron | 55.0% | |
| GTGGGGGGTAACAGCCTAAA+TGG | + | chr1.3:5620016-5620035 | MS.gene051637:intron | 55.0% | |
| GTTTCTTGCTGCAGAGCTGC+TGG | + | chr1.3:5622496-5622515 | MS.gene051637:intron | 55.0% | |
| TGGGAGATGCTAACGAGTGC+CGG | - | chr1.3:5621158-5621177 | None:intergenic | 55.0% | |
| TTCGGATTTGGCCGCGAGTT+AGG | + | chr1.3:5620069-5620088 | MS.gene051637:intron | 55.0% | |
| ! | CATTCAAGCGGGGAGTGTGT+TGG | + | chr1.3:5624222-5624241 | MS.gene051637:CDS | 55.0% |
| ! | CGGGGAGTGTGTTGGCAAAT+CGG | + | chr1.3:5624230-5624249 | MS.gene051637:CDS | 55.0% |
| !! | AAGGCCCTTAAAGAGTGCCC+CGG | + | chr1.3:5621783-5621802 | MS.gene051637:intron | 55.0% |
| !! | GGGTGGATTGGTCTAGAGGT+GGG | + | chr1.3:5624263-5624282 | MS.gene051637:CDS | 55.0% |
| !! | GGTGGATTGGTCTAGAGGTG+GGG | + | chr1.3:5624264-5624283 | MS.gene051637:CDS | 55.0% |
| !! | TGGGTGGATTGGTCTAGAGG+TGG | + | chr1.3:5624262-5624281 | MS.gene051637:CDS | 55.0% |
| !! | TTCCCATTGAAGAGTGCCCC+CGG | + | chr1.3:5621136-5621155 | MS.gene051637:intron | 55.0% |
| !!! | CCTCCTTGGCATTTTGGGGT+CGG | + | chr1.3:5622710-5622729 | MS.gene051637:intron | 55.0% |
| CAGACGGGTGCAAGAGGCAA+CGG | - | chr1.3:5618951-5618970 | None:intergenic | 60.0% | |
| CCGACCCCAAAATGCCAAGG+AGG | - | chr1.3:5622713-5622732 | None:intergenic | 60.0% | |
| CGTCCTCTTCCGTATGGACC+AGG | - | chr1.3:5624019-5624038 | None:intergenic | 60.0% | |
| GAGTGCCCCGGGACACTTTA+AGG | + | chr1.3:5621065-5621084 | MS.gene051637:intron | 60.0% | |
| GGGAGATGCTAACGAGTGCC+GGG | - | chr1.3:5621157-5621176 | None:intergenic | 60.0% | |
| GGGGAACCCAGGGATCATCA+CGG | - | chr1.3:5623611-5623630 | None:intergenic | 60.0% | |
| GGGGCCCATCCAGCTACATT+TGG | + | chr1.3:5624283-5624302 | MS.gene051637:CDS | 60.0% | |
| GGTCTTGCTAACGAGTGCCC+CGG | + | chr1.3:5621053-5621072 | MS.gene051637:intron | 60.0% | |
| GTCTTGCTAACGAGTGCCCC+GGG | + | chr1.3:5621054-5621073 | MS.gene051637:intron | 60.0% | |
| GTGCCCCGGGACACTCTTTA+AGG | + | chr1.3:5621669-5621688 | MS.gene051637:intron | 60.0% | |
| GTTGCCTCTTGCACCCGTCT+GGG | + | chr1.3:5618950-5618969 | MS.gene051637:CDS | 60.0% | |
| TGGCCGACCCCAAAATGCCA+AGG | - | chr1.3:5622716-5622735 | None:intergenic | 60.0% | |
| TGGGTCATGAGGGGAACCCA+GGG | - | chr1.3:5623621-5623640 | None:intergenic | 60.0% | |
| TTGGGTCATGAGGGGAACCC+AGG | - | chr1.3:5623622-5623641 | None:intergenic | 60.0% | |
| ! | GCCTCCGGGGCACTCTTTAA+GGG | - | chr1.3:5621790-5621809 | None:intergenic | 60.0% |
| ! | GGAGATGCTAACGAGTGCCG+GGG | - | chr1.3:5621156-5621175 | None:intergenic | 60.0% |
| ! | TGCCTCCGGGGCACTCTTTA+AGG | - | chr1.3:5621791-5621810 | None:intergenic | 60.0% |
| !! | GAGATGCTAACGAGTGCCGG+GGG | - | chr1.3:5621155-5621174 | None:intergenic | 60.0% |
| !! | GGAGAACTCCCCGACTTGGT+TGG | + | chr1.3:5621841-5621860 | MS.gene051637:intron | 60.0% |
| !! | TGCCGGGGGCACTCTTCAAT+GGG | - | chr1.3:5621141-5621160 | None:intergenic | 60.0% |
| CGTTGCCTCTTGCACCCGTC+TGG | + | chr1.3:5618949-5618968 | MS.gene051637:CDS | 65.0% | |
| CTCTCCCAGACGGGTGCAAG+AGG | - | chr1.3:5618957-5618976 | None:intergenic | 65.0% | |
| CTCTTGCACCCGTCTGGGAG+AGG | + | chr1.3:5618955-5618974 | MS.gene051637:CDS | 65.0% | |
| !! | GCCCTTAAAGAGTGCCCCGG+AGG | + | chr1.3:5621786-5621805 | MS.gene051637:intron | 65.0% |
| !! | GTGCCGGGGGCACTCTTCAA+TGG | - | chr1.3:5621142-5621161 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5618600 | 5624471 | 5618600 | ID=MS.gene051637 |
| chr1.3 | mRNA | 5618600 | 5624471 | 5618600 | ID=MS.gene051637.t1;Parent=MS.gene051637 |
| chr1.3 | exon | 5618600 | 5619088 | 5618600 | ID=MS.gene051637.t1.exon1;Parent=MS.gene051637.t1 |
| chr1.3 | CDS | 5618600 | 5619088 | 5618600 | ID=cds.MS.gene051637.t1;Parent=MS.gene051637.t1 |
| chr1.3 | exon | 5623830 | 5624471 | 5623830 | ID=MS.gene051637.t1.exon2;Parent=MS.gene051637.t1 |
| chr1.3 | CDS | 5623830 | 5624471 | 5623830 | ID=cds.MS.gene051637.t1;Parent=MS.gene051637.t1 |
| Gene Sequence |
| Protein sequence |
