Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25976.t1 | XP_003601243.1 | 96.6 | 116 | 4 | 0 | 62 | 177 | 6 | 121 | 5.80E-56 | 227.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25976.t1 | Q8L8T2 | 68.1 | 113 | 36 | 0 | 61 | 173 | 6 | 118 | 1.6e-38 | 160.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25976.t1 | G7J5D8 | 96.6 | 116 | 4 | 0 | 62 | 177 | 6 | 121 | 4.2e-56 | 227.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25976.t1 | MTR_3g077570 | 96.552 | 116 | 4 | 0 | 62 | 177 | 6 | 121 | 1.01e-79 | 233 |
| MS.gene25976.t1 | MTR_3g077560 | 82.407 | 108 | 19 | 0 | 66 | 173 | 13 | 120 | 1.32e-64 | 194 |
| MS.gene25976.t1 | MTR_7g035245 | 64.762 | 105 | 37 | 0 | 73 | 177 | 2 | 106 | 5.71e-45 | 144 |
| MS.gene25976.t1 | MTR_1g069255 | 51.042 | 96 | 46 | 1 | 78 | 172 | 87 | 182 | 3.85e-26 | 99.0 |
| MS.gene25976.t1 | MTR_2g038560 | 43.243 | 111 | 54 | 2 | 59 | 167 | 18 | 121 | 4.95e-24 | 91.7 |
| MS.gene25976.t1 | MTR_2g038560 | 43.243 | 111 | 54 | 2 | 59 | 167 | 59 | 162 | 5.78e-24 | 92.8 |
| MS.gene25976.t1 | MTR_2g038560 | 43.243 | 111 | 54 | 2 | 59 | 167 | 62 | 165 | 6.85e-24 | 92.8 |
| MS.gene25976.t1 | MTR_5g021090 | 44.318 | 88 | 49 | 0 | 83 | 170 | 42 | 129 | 7.53e-20 | 80.9 |
| MS.gene25976.t1 | MTR_1g088905 | 37.000 | 100 | 63 | 0 | 74 | 173 | 1 | 100 | 1.03e-18 | 77.0 |
| MS.gene25976.t1 | MTR_7g022690 | 41.748 | 103 | 59 | 1 | 74 | 175 | 30 | 132 | 1.66e-18 | 77.4 |
| MS.gene25976.t1 | MTR_2g019900 | 38.000 | 100 | 62 | 0 | 74 | 173 | 1 | 100 | 2.08e-18 | 76.3 |
| MS.gene25976.t1 | MTR_7g022550 | 41.748 | 103 | 59 | 1 | 74 | 175 | 30 | 132 | 2.19e-18 | 77.0 |
| MS.gene25976.t1 | MTR_7g108250 | 37.000 | 100 | 63 | 0 | 74 | 173 | 1 | 100 | 2.58e-18 | 76.3 |
| MS.gene25976.t1 | MTR_7g022710 | 40.777 | 103 | 60 | 1 | 74 | 175 | 30 | 132 | 4.67e-18 | 76.3 |
| MS.gene25976.t1 | MTR_2g048970 | 39.796 | 98 | 55 | 2 | 80 | 173 | 34 | 131 | 2.87e-17 | 74.3 |
| MS.gene25976.t1 | MTR_7g108220 | 37.624 | 101 | 62 | 1 | 74 | 173 | 1 | 101 | 4.43e-17 | 73.2 |
| MS.gene25976.t1 | MTR_4g119050 | 36.893 | 103 | 64 | 1 | 74 | 175 | 1 | 103 | 1.53e-16 | 71.6 |
| MS.gene25976.t1 | MTR_4g119030 | 36.893 | 103 | 64 | 1 | 74 | 175 | 1 | 103 | 1.53e-16 | 71.6 |
| MS.gene25976.t1 | MTR_4g119040 | 36.893 | 103 | 64 | 1 | 74 | 175 | 1 | 103 | 1.53e-16 | 71.6 |
| MS.gene25976.t1 | MTR_7g108210 | 36.634 | 101 | 63 | 1 | 74 | 173 | 1 | 101 | 2.34e-16 | 71.2 |
| MS.gene25976.t1 | MTR_2g019950 | 34.314 | 102 | 67 | 0 | 74 | 175 | 1 | 102 | 3.29e-16 | 70.9 |
| MS.gene25976.t1 | MTR_7g026770 | 37.615 | 109 | 67 | 1 | 66 | 173 | 14 | 122 | 5.99e-16 | 73.9 |
| MS.gene25976.t1 | MTR_1g088910 | 37.000 | 100 | 63 | 0 | 74 | 173 | 1 | 100 | 6.64e-16 | 70.1 |
| MS.gene25976.t1 | MTR_5g077550 | 43.023 | 86 | 47 | 1 | 92 | 175 | 38 | 123 | 7.88e-16 | 70.5 |
| MS.gene25976.t1 | MTR_1g088925 | 34.737 | 95 | 62 | 0 | 74 | 168 | 1 | 95 | 1.04e-15 | 69.3 |
| MS.gene25976.t1 | MTR_1g088920 | 34.737 | 95 | 62 | 0 | 74 | 168 | 1 | 95 | 1.21e-15 | 69.3 |
| MS.gene25976.t1 | MTR_7g108260 | 36.000 | 100 | 64 | 0 | 74 | 173 | 1 | 100 | 1.44e-15 | 68.9 |
| MS.gene25976.t1 | MTR_1g088895 | 35.000 | 100 | 65 | 0 | 74 | 173 | 1 | 100 | 6.72e-14 | 64.7 |
| MS.gene25976.t1 | MTR_7g108200 | 32.632 | 95 | 64 | 0 | 74 | 168 | 1 | 95 | 3.00e-13 | 63.2 |
| MS.gene25976.t1 | MTR_2g014760 | 38.462 | 91 | 54 | 2 | 86 | 175 | 38 | 127 | 8.74e-13 | 62.4 |
| MS.gene25976.t1 | MTR_2g090755 | 35.897 | 117 | 71 | 2 | 63 | 175 | 24 | 140 | 1.30e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25976.t1 | AT5G63030 | 68.142 | 113 | 36 | 0 | 61 | 173 | 6 | 118 | 1.02e-52 | 164 |
| MS.gene25976.t1 | AT5G40370 | 70.297 | 101 | 30 | 0 | 73 | 173 | 2 | 102 | 3.16e-48 | 152 |
| MS.gene25976.t1 | AT5G40370 | 69.767 | 86 | 26 | 0 | 88 | 173 | 42 | 127 | 1.85e-40 | 134 |
| MS.gene25976.t1 | AT5G20500 | 41.441 | 111 | 60 | 1 | 61 | 171 | 24 | 129 | 3.62e-25 | 94.7 |
| MS.gene25976.t1 | AT2G20270 | 49.474 | 95 | 47 | 1 | 77 | 170 | 78 | 172 | 9.39e-25 | 95.1 |
| MS.gene25976.t1 | AT1G77370 | 48.235 | 85 | 44 | 0 | 83 | 167 | 43 | 127 | 2.92e-22 | 87.0 |
| MS.gene25976.t1 | AT4G28730 | 41.748 | 103 | 58 | 2 | 70 | 170 | 65 | 167 | 2.06e-21 | 86.3 |
| MS.gene25976.t1 | AT2G20270 | 38.525 | 122 | 47 | 1 | 77 | 170 | 78 | 199 | 2.74e-20 | 84.0 |
| MS.gene25976.t1 | AT5G18600 | 39.000 | 100 | 61 | 0 | 74 | 173 | 1 | 100 | 3.73e-18 | 75.9 |
| MS.gene25976.t1 | AT1G03020 | 41.000 | 100 | 59 | 0 | 74 | 173 | 1 | 100 | 1.39e-17 | 74.3 |
| MS.gene25976.t1 | AT4G15700 | 39.216 | 102 | 62 | 0 | 74 | 175 | 1 | 102 | 1.57e-17 | 74.3 |
| MS.gene25976.t1 | AT3G02000 | 40.000 | 110 | 60 | 1 | 72 | 175 | 27 | 136 | 2.64e-17 | 74.7 |
| MS.gene25976.t1 | AT4G15680 | 37.255 | 102 | 64 | 0 | 74 | 175 | 1 | 102 | 5.59e-17 | 72.8 |
| MS.gene25976.t1 | AT5G14070 | 38.182 | 110 | 60 | 1 | 74 | 175 | 31 | 140 | 7.25e-17 | 73.6 |
| MS.gene25976.t1 | AT4G15670 | 36.275 | 102 | 65 | 0 | 74 | 175 | 1 | 102 | 8.40e-17 | 72.4 |
| MS.gene25976.t1 | AT3G62930 | 37.000 | 100 | 63 | 0 | 74 | 173 | 1 | 100 | 1.05e-16 | 72.0 |
| MS.gene25976.t1 | AT1G77370 | 36.937 | 111 | 44 | 1 | 83 | 167 | 43 | 153 | 1.48e-16 | 73.2 |
| MS.gene25976.t1 | AT3G62950 | 33.981 | 103 | 67 | 1 | 74 | 175 | 1 | 103 | 2.21e-16 | 71.2 |
| MS.gene25976.t1 | AT4G15690 | 37.255 | 102 | 64 | 0 | 74 | 175 | 1 | 102 | 2.37e-16 | 71.2 |
| MS.gene25976.t1 | AT3G21460 | 35.294 | 102 | 66 | 0 | 74 | 175 | 1 | 102 | 2.39e-16 | 71.2 |
| MS.gene25976.t1 | AT4G15660 | 36.275 | 102 | 65 | 0 | 74 | 175 | 1 | 102 | 4.45e-16 | 70.5 |
| MS.gene25976.t1 | AT2G47870 | 32.039 | 103 | 69 | 1 | 74 | 175 | 1 | 103 | 7.44e-15 | 67.4 |
| MS.gene25976.t1 | AT2G47880 | 33.000 | 100 | 67 | 0 | 74 | 173 | 1 | 100 | 8.79e-15 | 67.0 |
| MS.gene25976.t1 | AT4G33040 | 36.275 | 102 | 61 | 1 | 76 | 173 | 41 | 142 | 2.14e-14 | 67.0 |
| MS.gene25976.t1 | AT1G06830 | 33.684 | 95 | 63 | 0 | 74 | 168 | 1 | 95 | 4.15e-14 | 65.1 |
| MS.gene25976.t1 | AT3G62960 | 32.979 | 94 | 63 | 0 | 74 | 167 | 1 | 94 | 6.62e-14 | 64.7 |
| MS.gene25976.t1 | AT2G30540 | 34.343 | 99 | 65 | 0 | 74 | 172 | 1 | 99 | 9.70e-14 | 64.3 |
| MS.gene25976.t1 | AT4G28730 | 40.789 | 76 | 43 | 2 | 70 | 143 | 65 | 140 | 3.52e-13 | 63.9 |
| MS.gene25976.t1 | AT1G28480 | 29.771 | 131 | 85 | 3 | 50 | 175 | 9 | 137 | 1.42e-11 | 59.7 |
| MS.gene25976.t1 | AT5G11930 | 33.010 | 103 | 59 | 3 | 72 | 173 | 53 | 146 | 4.73e-11 | 58.5 |
Find 49 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATTTGTTTCAGCTGTTT+TGG | 0.209795 | 3.3:+65835270 | MS.gene25976:intron |
| ACAGTACCTAACGTGTTTAT+TGG | 0.289321 | 3.3:+65834926 | MS.gene25976:CDS |
| CCTGTGGTTCCAGTTGTGAT+TGG | 0.345836 | 3.3:-65830363 | None:intergenic |
| CTTATTGTGGTTACTGCAAT+CGG | 0.372327 | 3.3:+65833314 | MS.gene25976:CDS |
| TGCAGAAAGCCAATCACAAC+TGG | 0.403603 | 3.3:+65830354 | MS.gene25976:intron |
| TTTACCTATTTGAAGGTGAT+GGG | 0.404437 | 3.3:+65834861 | MS.gene25976:intron |
| GATCTCCTTAGCTTTGTTCA+TGG | 0.428147 | 3.3:-65832112 | None:intergenic |
| AGCCCACAAGGTCATTGAAT+TGG | 0.441001 | 3.3:+65833366 | MS.gene25976:CDS |
| GTTCCCCTTCTCAATGATGC+TGG | 0.442108 | 3.3:+65835316 | MS.gene25976:CDS |
| GTCCAATTCAATGACCTTGT+GGG | 0.442667 | 3.3:-65833368 | None:intergenic |
| GCATATTCTGAGCATAACTT+TGG | 0.450420 | 3.3:+65830436 | MS.gene25976:CDS |
| GCAGCATTAGCTGAGTGGAC+AGG | 0.456852 | 3.3:+65834896 | MS.gene25976:CDS |
| GATGTCTTAAATCTTTCTAA+AGG | 0.464511 | 3.3:+65830391 | MS.gene25976:CDS |
| GAAACACCGGACAGGTCAAT+TGG | 0.471409 | 3.3:+65835294 | MS.gene25976:CDS |
| TGTCCAATTCAATGACCTTG+TGG | 0.480738 | 3.3:-65833369 | None:intergenic |
| CAAGGATCTACTCAAACAGC+TGG | 0.497844 | 3.3:+65833339 | MS.gene25976:CDS |
| GAAAACCTGAAGACAAAGAC+GGG | 0.522262 | 3.3:-65832147 | None:intergenic |
| TTATTGTGGTTACTGCAATC+GGG | 0.524175 | 3.3:+65833315 | MS.gene25976:CDS |
| CCAATCACAACTGGAACCAC+AGG | 0.526523 | 3.3:+65830363 | MS.gene25976:CDS |
| ATTGGAGGCAAGCACATTGG+TGG | 0.528449 | 3.3:+65834944 | MS.gene25976:CDS |
| TGCGAAGAGCAAAGAAGTGA+TGG | 0.537754 | 3.3:+65832083 | MS.gene25976:CDS |
| TTACCTATTTGAAGGTGATG+GGG | 0.538474 | 3.3:+65834862 | MS.gene25976:intron |
| CTATTAAGTGCTGAGCGGAA+TGG | 0.550121 | 3.3:-65835341 | None:intergenic |
| GGCTCCAGCATCATTGAGAA+GGG | 0.551797 | 3.3:-65835320 | None:intergenic |
| GGGGAACCAATTGACCTGTC+CGG | 0.552499 | 3.3:-65835300 | None:intergenic |
| TTGCCTCCAATAAACACGTT+AGG | 0.552854 | 3.3:-65834932 | None:intergenic |
| CAGCATTAGCTGAGTGGACA+GGG | 0.552955 | 3.3:+65834897 | MS.gene25976:CDS |
| TGGCTCCAGCATCATTGAGA+AGG | 0.568279 | 3.3:-65835321 | None:intergenic |
| TGGTTACTGCAATCGGGTCA+AGG | 0.573279 | 3.3:+65833321 | MS.gene25976:CDS |
| TTAGATGACGACGATTCAGC+AGG | 0.573450 | 3.3:+65830240 | MS.gene25976:CDS |
| TAGCTGAGTGGACAGGGCAA+AGG | 0.577424 | 3.3:+65834903 | MS.gene25976:CDS |
| GTACCTAACGTGTTTATTGG+AGG | 0.577999 | 3.3:+65834929 | MS.gene25976:CDS |
| AGTAACATATGCTCATCAGC+AGG | 0.590998 | 3.3:+65830196 | None:intergenic |
| TTTATTGGAGGCAAGCACAT+TGG | 0.601349 | 3.3:+65834941 | MS.gene25976:CDS |
| GCGAAGAGCAAAGAAGTGAT+GGG | 0.601421 | 3.3:+65832084 | MS.gene25976:CDS |
| TACCTATTTGAAGGTGATGG+GGG | 0.603458 | 3.3:+65834863 | MS.gene25976:intron |
| AACTGCCATGAACAAAGCTA+AGG | 0.605066 | 3.3:+65832107 | MS.gene25976:CDS |
| TTCAAGCAGCATTAGCTGAG+TGG | 0.627494 | 3.3:+65834891 | MS.gene25976:CDS |
| TGTGGCAGTAAGACTTATTG+TGG | 0.633664 | 3.3:+65833301 | MS.gene25976:intron |
| ACAGCTGGGAGCAGCCCACA+AGG | 0.635312 | 3.3:+65833354 | MS.gene25976:CDS |
| AGAAAACCTGAAGACAAAGA+CGG | 0.636207 | 3.3:-65832148 | None:intergenic |
| GAATGTTGAAGTTCTTGAGT+CGG | 0.648138 | 3.3:+65830462 | MS.gene25976:CDS |
| AAGGATCTACTCAAACAGCT+GGG | 0.654980 | 3.3:+65833340 | MS.gene25976:CDS |
| GCTCCAGCATCATTGAGAAG+GGG | 0.665124 | 3.3:-65835319 | None:intergenic |
| CAATCACAACTGGAACCACA+GGG | 0.667587 | 3.3:+65830364 | MS.gene25976:CDS |
| TTTGGCTATTAAGTGCTGAG+CGG | 0.689501 | 3.3:-65835346 | None:intergenic |
| AAAACCTGAAGACAAAGACG+GGG | 0.724205 | 3.3:-65832146 | None:intergenic |
| AAACCTGAAGACAAAGACGG+GGG | 0.745087 | 3.3:-65832145 | None:intergenic |
| TTTAAGACATCACTACCCTG+TGG | 0.746320 | 3.3:-65830379 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTAAACACAAAAA+AGG | + | chr3.3:65833068-65833087 | MS.gene25976:intron | 10.0% |
| !! | AATTTATTAAACACAAAAAA+GGG | + | chr3.3:65833069-65833088 | MS.gene25976:intron | 10.0% |
| !! | ATATAGACATATAAATAAAT+GGG | + | chr3.3:65832045-65832064 | MS.gene25976:intron | 10.0% |
| !! | TTGAGAAAATATTAATTTAT+AGG | - | chr3.3:65831049-65831068 | None:intergenic | 10.0% |
| !!! | TATGATTAATATACTTTTAA+TGG | - | chr3.3:65833729-65833748 | None:intergenic | 10.0% |
| !!! | TCTTTCTTTTTTATTTAATT+AGG | + | chr3.3:65830766-65830785 | MS.gene25976:intron | 10.0% |
| !!! | TTTAATAAATTTTGTTTGTT+TGG | - | chr3.3:65833060-65833079 | None:intergenic | 10.0% |
| !! | ATTTATTAAACACAAAAAAG+GGG | + | chr3.3:65833070-65833089 | MS.gene25976:intron | 15.0% |
| !! | CATATAGACATATAAATAAA+TGG | + | chr3.3:65832044-65832063 | MS.gene25976:intron | 15.0% |
| !!! | AAAAATCTTTTAGATTCTAA+AGG | - | chr3.3:65831080-65831099 | None:intergenic | 15.0% |
| !!! | TTTTTAAGAAAATCAGTATT+TGG | + | chr3.3:65832458-65832477 | MS.gene25976:intron | 15.0% |
| !! | AAACATGAAATATATTGAGA+CGG | - | chr3.3:65833419-65833438 | None:intergenic | 20.0% |
| !! | AAACTAGTAATTAGTAACTA+AGG | - | chr3.3:65833874-65833893 | None:intergenic | 20.0% |
| !! | AAACTTAAAATATGTCTAAG+AGG | - | chr3.3:65833528-65833547 | None:intergenic | 20.0% |
| !! | AAATAAAAAAGAAAGACATG+TGG | - | chr3.3:65830762-65830781 | None:intergenic | 20.0% |
| !! | ACAGAATTAATAATTTACCT+CGG | - | chr3.3:65833926-65833945 | None:intergenic | 20.0% |
| !! | ACGTTACAAAATGATTATTT+GGG | - | chr3.3:65834425-65834444 | None:intergenic | 20.0% |
| !! | AGAGCTTAAAAATTACATTT+CGG | - | chr3.3:65830976-65830995 | None:intergenic | 20.0% |
| !! | ATCTTATGGTATATTATTGA+TGG | - | chr3.3:65834029-65834048 | None:intergenic | 20.0% |
| !! | ATCTTGTGATATATTATTGA+TGG | + | chr3.3:65834671-65834690 | MS.gene25976:intron | 20.0% |
| !! | ATGAGTCCTTAATTTAAAAA+GGG | + | chr3.3:65831499-65831518 | MS.gene25976:intron | 20.0% |
| !! | ATGTGATTATATGGTATAAA+CGG | + | chr3.3:65830799-65830818 | MS.gene25976:intron | 20.0% |
| !! | TAAAAAAATGAACTGATTGT+GGG | + | chr3.3:65832225-65832244 | MS.gene25976:intron | 20.0% |
| !! | TACGTTACAAAATGATTATT+TGG | - | chr3.3:65834426-65834445 | None:intergenic | 20.0% |
| !! | TAGAAAATGAAAAAGAAGAA+AGG | + | chr3.3:65833602-65833621 | MS.gene25976:intron | 20.0% |
| !! | TTAAAAAAATGAACTGATTG+TGG | + | chr3.3:65832224-65832243 | MS.gene25976:intron | 20.0% |
| !! | TTCTCTTATATAATATAGGT+TGG | + | chr3.3:65832666-65832685 | MS.gene25976:intron | 20.0% |
| !!! | AACAATAAAAACTCTAGTTT+TGG | - | chr3.3:65835018-65835037 | None:intergenic | 20.0% |
| !!! | AGTAAACATTTTACTTGAAT+CGG | - | chr3.3:65831842-65831861 | None:intergenic | 20.0% |
| !!! | ATATCACAAGATCTATTTTA+GGG | - | chr3.3:65834663-65834682 | None:intergenic | 20.0% |
| !!! | ATTTTCACAATAAAAACTCA+CGG | + | chr3.3:65832934-65832953 | MS.gene25976:intron | 20.0% |
| !!! | GAGTTTTTATTGTGAAAATT+GGG | - | chr3.3:65832933-65832952 | None:intergenic | 20.0% |
| !!! | TATATCACAAGATCTATTTT+AGG | - | chr3.3:65834664-65834683 | None:intergenic | 20.0% |
| !!! | TATTGGCTATTATTTCTATA+GGG | - | chr3.3:65833145-65833164 | None:intergenic | 20.0% |
| !!! | TCATTTTGTAACGTAAATAA+TGG | + | chr3.3:65834431-65834450 | MS.gene25976:intron | 20.0% |
| !!! | TGAGTTTTTATTGTGAAAAT+TGG | - | chr3.3:65832934-65832953 | None:intergenic | 20.0% |
| !!! | TTATTGGCTATTATTTCTAT+AGG | - | chr3.3:65833146-65833165 | None:intergenic | 20.0% |
| !!! | TTGTCATAACATTATTTTGA+GGG | + | chr3.3:65833960-65833979 | MS.gene25976:intron | 20.0% |
| ! | AAAAAAATGAACTGATTGTG+GGG | + | chr3.3:65832226-65832245 | MS.gene25976:intron | 25.0% |
| ! | AAAATCTGATTGGAAATGAA+CGG | - | chr3.3:65834222-65834241 | None:intergenic | 25.0% |
| ! | AAACCTTCAAATAGATCTTA+TGG | - | chr3.3:65834043-65834062 | None:intergenic | 25.0% |
| ! | AAATAATAGCCAATAAAAGC+GGG | + | chr3.3:65833150-65833169 | MS.gene25976:intron | 25.0% |
| ! | AACAAACAAAGACCTAAAAA+GGG | - | chr3.3:65833499-65833518 | None:intergenic | 25.0% |
| ! | AACAATGAACTCAAAATATG+TGG | - | chr3.3:65834737-65834756 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr3.3:65835100-65835119 | None:intergenic | 25.0% |
| ! | AATTAAAAACAATCCACGTA+AGG | - | chr3.3:65831009-65831028 | None:intergenic | 25.0% |
| ! | ATACCATAAGATCTATTTGA+AGG | + | chr3.3:65834037-65834056 | MS.gene25976:intron | 25.0% |
| ! | ATCCTGTTAATGTGATTATA+TGG | + | chr3.3:65830790-65830809 | MS.gene25976:intron | 25.0% |
| ! | ATTTCCAATTAAATCCAAAG+TGG | + | chr3.3:65834813-65834832 | MS.gene25976:intron | 25.0% |
| ! | CACAACATAAATTACAGAAT+GGG | - | chr3.3:65833280-65833299 | None:intergenic | 25.0% |
| ! | CATGAGTCCTTAATTTAAAA+AGG | + | chr3.3:65831498-65831517 | MS.gene25976:intron | 25.0% |
| ! | CATGCAATACAAAAATTTGA+AGG | + | chr3.3:65834337-65834356 | MS.gene25976:intron | 25.0% |
| ! | CCAAAAAAATGGAATAGATA+TGG | - | chr3.3:65830655-65830674 | None:intergenic | 25.0% |
| ! | GAAAATCTTGAATCAGTATT+TGG | + | chr3.3:65832359-65832378 | MS.gene25976:intron | 25.0% |
| ! | GAAATAATAGCCAATAAAAG+CGG | + | chr3.3:65833149-65833168 | MS.gene25976:intron | 25.0% |
| ! | GAACGGATAAAAAAAAAATG+AGG | - | chr3.3:65834205-65834224 | None:intergenic | 25.0% |
| ! | GAGCTTAAAAATTACATTTC+GGG | - | chr3.3:65830975-65830994 | None:intergenic | 25.0% |
| ! | GATAAAAAAAAAATGAGGAG+GGG | - | chr3.3:65834200-65834219 | None:intergenic | 25.0% |
| ! | GATGTCTTAAATCTTTCTAA+AGG | + | chr3.3:65830391-65830410 | MS.gene25976:CDS | 25.0% |
| ! | GATTCAAGAAAATCAGTATT+TGG | - | chr3.3:65832554-65832573 | None:intergenic | 25.0% |
| ! | GGATAAAAAAAAAATGAGGA+GGG | - | chr3.3:65834201-65834220 | None:intergenic | 25.0% |
| ! | GTTATGCTCTTTAATGAAAA+GGG | + | chr3.3:65832582-65832601 | MS.gene25976:intron | 25.0% |
| ! | TAACAAACAAAGACCTAAAA+AGG | - | chr3.3:65833500-65833519 | None:intergenic | 25.0% |
| ! | TAACTTCTGATGTATTCATT+TGG | + | chr3.3:65831459-65831478 | MS.gene25976:intron | 25.0% |
| ! | TACCATATAATCACATTAAC+AGG | - | chr3.3:65830795-65830814 | None:intergenic | 25.0% |
| ! | TGTTATGCTCTTTAATGAAA+AGG | + | chr3.3:65832581-65832600 | MS.gene25976:intron | 25.0% |
| ! | TTTACTATGGTACATTACAA+AGG | + | chr3.3:65831774-65831793 | MS.gene25976:intron | 25.0% |
| ! | TTTCCAATTAAATCCAAAGT+GGG | + | chr3.3:65834814-65834833 | MS.gene25976:intron | 25.0% |
| ! | TTTGTATTGCATGAAATTCT+TGG | - | chr3.3:65834330-65834349 | None:intergenic | 25.0% |
| !! | AATTACCAGTATGATTGTTT+TGG | + | chr3.3:65834260-65834279 | MS.gene25976:intron | 25.0% |
| !! | ACCATAGTAAACAATTTTCA+TGG | - | chr3.3:65831765-65831784 | None:intergenic | 25.0% |
| !! | AGTTGTCCCTTTTTAAATTA+AGG | - | chr3.3:65831508-65831527 | None:intergenic | 25.0% |
| !! | ATATATTATTGATGGTACAC+CGG | + | chr3.3:65834679-65834698 | MS.gene25976:intron | 25.0% |
| !! | ATTCTTGGATTTTATGGATT+TGG | - | chr3.3:65834315-65834334 | None:intergenic | 25.0% |
| !! | ATTTTCATGTGTAAAGTACA+TGG | + | chr3.3:65832973-65832992 | MS.gene25976:intron | 25.0% |
| !! | CACTTTTGTATGACTTTTAT+AGG | + | chr3.3:65831172-65831191 | MS.gene25976:intron | 25.0% |
| !! | CATGAAATTCTTGGATTTTA+TGG | - | chr3.3:65834321-65834340 | None:intergenic | 25.0% |
| !! | GATTTTCTTGAATCAGTATT+TGG | + | chr3.3:65832392-65832411 | MS.gene25976:intron | 25.0% |
| !! | TAAGTTTTCCAATTTCACTT+GGG | + | chr3.3:65833541-65833560 | MS.gene25976:intron | 25.0% |
| !! | TATTTCTATAGGGACTTATT+AGG | - | chr3.3:65833135-65833154 | None:intergenic | 25.0% |
| !! | TTAAGTTTTCCAATTTCACT+TGG | + | chr3.3:65833540-65833559 | MS.gene25976:intron | 25.0% |
| !! | TTTATTTGTTTCAGCTGTTT+TGG | + | chr3.3:65835270-65835289 | MS.gene25976:intron | 25.0% |
| !! | TTTTCATGTGTAAAGTACAT+GGG | + | chr3.3:65832974-65832993 | MS.gene25976:intron | 25.0% |
| !!! | ATTTTTTGTTTTCCCGTATA+CGG | - | chr3.3:65833642-65833661 | None:intergenic | 25.0% |
| !!! | CCATATCTATTCCATTTTTT+TGG | + | chr3.3:65830652-65830671 | MS.gene25976:intron | 25.0% |
| !!! | CTTGTCATAACATTATTTTG+AGG | + | chr3.3:65833959-65833978 | MS.gene25976:intron | 25.0% |
| !!! | GTAGTATTGTTATTGCATTT+TGG | + | chr3.3:65831646-65831665 | MS.gene25976:intron | 25.0% |
| !!! | TACTCCTTTAGAATCAATTT+CGG | + | chr3.3:65832816-65832835 | MS.gene25976:intron | 25.0% |
| !!! | TGGTACTATTTTTATGTCAA+CGG | + | chr3.3:65831666-65831685 | MS.gene25976:intron | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr3.3:65835099-65835118 | MS.gene25976:intron | 25.0% |
| AATACAAAATCTCCGTATAC+GGG | + | chr3.3:65833627-65833646 | MS.gene25976:intron | 30.0% | |
| AATCCTCAACAAAATCTGAT+TGG | - | chr3.3:65834232-65834251 | None:intergenic | 30.0% | |
| ACAAACAAAGACCTAAAAAG+GGG | - | chr3.3:65833498-65833517 | None:intergenic | 30.0% | |
| ACATTCAAGAAAATCGTTAG+GGG | - | chr3.3:65832286-65832305 | None:intergenic | 30.0% | |
| AGACATTCAAGAAAATCGTT+AGG | - | chr3.3:65832288-65832307 | None:intergenic | 30.0% | |
| ATATGTTATGTTACCGTAAC+AGG | + | chr3.3:65831732-65831751 | MS.gene25976:intron | 30.0% | |
| ATCTCATGTATGCATTGAAT+TGG | + | chr3.3:65833205-65833224 | MS.gene25976:intron | 30.0% | |
| ATGACCTTGTCATCAAAATT+TGG | - | chr3.3:65831955-65831974 | None:intergenic | 30.0% | |
| CAGTCAATAGCAAAATATCT+TGG | - | chr3.3:65830560-65830579 | None:intergenic | 30.0% | |
| CCACAACATAAATTACAGAA+TGG | - | chr3.3:65833281-65833300 | None:intergenic | 30.0% | |
| CCAGATCAACTAATCATAAA+CGG | + | chr3.3:65833898-65833917 | MS.gene25976:intron | 30.0% | |
| CCATTCTGTAATTTATGTTG+TGG | + | chr3.3:65833278-65833297 | MS.gene25976:intron | 30.0% | |
| CGGATAAAAAAAAAATGAGG+AGG | - | chr3.3:65834202-65834221 | None:intergenic | 30.0% | |
| CGGGAAAACAAAAAATGTAT+TGG | + | chr3.3:65833646-65833665 | MS.gene25976:intron | 30.0% | |
| CTTAAAAATTACATTTCGGG+AGG | - | chr3.3:65830972-65830991 | None:intergenic | 30.0% | |
| GAATACAAAATCTCCGTATA+CGG | + | chr3.3:65833626-65833645 | MS.gene25976:intron | 30.0% | |
| GACATTCAAGAAAATCGTTA+GGG | - | chr3.3:65832287-65832306 | None:intergenic | 30.0% | |
| GACATTCTTCACCAAAAAAA+TGG | - | chr3.3:65830666-65830685 | None:intergenic | 30.0% | |
| GCCATGAAAATTGTTTACTA+TGG | + | chr3.3:65831761-65831780 | MS.gene25976:intron | 30.0% | |
| GGGGTTCTCTTATATAATAT+AGG | + | chr3.3:65832662-65832681 | MS.gene25976:intron | 30.0% | |
| TAACTAGAATTTGCAGCTAT+TGG | - | chr3.3:65832727-65832746 | None:intergenic | 30.0% | |
| TATGTTATGTTACCGTAACA+GGG | + | chr3.3:65831733-65831752 | MS.gene25976:intron | 30.0% | |
| TATTGGTAGAAGACTTTAGA+GGG | + | chr3.3:65833663-65833682 | MS.gene25976:intron | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr3.3:65835074-65835093 | None:intergenic | 30.0% | |
| TGTTGGGAAAAAAAATACCA+TGG | - | chr3.3:65831351-65831370 | None:intergenic | 30.0% | |
| TTCCAATTAAATCCAAAGTG+GGG | + | chr3.3:65834815-65834834 | MS.gene25976:intron | 30.0% | |
| TTCTTATTGGTCAAAAGCAA+TGG | + | chr3.3:65835112-65835131 | MS.gene25976:intron | 30.0% | |
| TTTACCTATTTGAAGGTGAT+GGG | + | chr3.3:65834861-65834880 | MS.gene25976:intron | 30.0% | |
| ! | AAACAGATTTTTATACGCAC+TGG | + | chr3.3:65834373-65834392 | MS.gene25976:intron | 30.0% |
| ! | ATTTTTATGTCAACGGACAT+TGG | + | chr3.3:65831673-65831692 | MS.gene25976:intron | 30.0% |
| ! | ATTTTTCTACTATGTCGCAT+AGG | + | chr3.3:65831392-65831411 | MS.gene25976:intron | 30.0% |
| ! | GTATATTATTGATGGTACAC+CGG | - | chr3.3:65834021-65834040 | None:intergenic | 30.0% |
| ! | GTTTTGCTGGAAAAAACAAA+GGG | + | chr3.3:65834584-65834603 | MS.gene25976:intron | 30.0% |
| ! | TCAGAAGTAAGAGTTTTTCA+TGG | + | chr3.3:65834460-65834479 | MS.gene25976:intron | 30.0% |
| ! | TCTAACATAAAAGGTTTTGC+TGG | + | chr3.3:65834571-65834590 | MS.gene25976:intron | 30.0% |
| ! | TTGAAATTGTGGAGATTTTG+TGG | - | chr3.3:65831544-65831563 | None:intergenic | 30.0% |
| ! | TTTCCAATCAGATTTTGTTG+AGG | + | chr3.3:65834226-65834245 | MS.gene25976:intron | 30.0% |
| ! | TTTTACCTATTTGAAGGTGA+TGG | + | chr3.3:65834860-65834879 | MS.gene25976:intron | 30.0% |
| ! | TTTTCCAAAAGTTGAATGTG+AGG | + | chr3.3:65833455-65833474 | MS.gene25976:intron | 30.0% |
| !! | TTTGTCTTTTTCACAAAGCA+CGG | - | chr3.3:65834783-65834802 | None:intergenic | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr3.3:65835197-65835216 | None:intergenic | 30.0% |
| !!! | AGATCTATTTTAGGGTAGAT+TGG | - | chr3.3:65834655-65834674 | None:intergenic | 30.0% |
| !!! | TCATAACATTATTTTGAGGG+TGG | + | chr3.3:65833963-65833982 | MS.gene25976:intron | 30.0% |
| !!! | TGCTGTTTTTACCTATTTGA+AGG | + | chr3.3:65834854-65834873 | MS.gene25976:intron | 30.0% |
| AAAAAACAAAGGGCAGGAAT+TGG | + | chr3.3:65834594-65834613 | MS.gene25976:intron | 35.0% | |
| AAAAACAAAGGGCAGGAATT+GGG | + | chr3.3:65834595-65834614 | MS.gene25976:intron | 35.0% | |
| AAAAAGAAAGACATGTGGCA+AGG | - | chr3.3:65830757-65830776 | None:intergenic | 35.0% | |
| AAAAAGGGGTTACAAAGGAT+TGG | + | chr3.3:65833084-65833103 | MS.gene25976:intron | 35.0% | |
| AAAAAGTAGCTAAAGGAGTG+TGG | - | chr3.3:65834984-65835003 | None:intergenic | 35.0% | |
| AAAACAGCTAAGTGTGTGTT+AGG | - | chr3.3:65833028-65833047 | None:intergenic | 35.0% | |
| AAAAGGGGTTACAAAGGATT+GGG | + | chr3.3:65833085-65833104 | MS.gene25976:intron | 35.0% | |
| AAACATAGCCCAAGTGAAAT+TGG | - | chr3.3:65833552-65833571 | None:intergenic | 35.0% | |
| AATCTCCACAATTTCAAGCA+TGG | + | chr3.3:65831547-65831566 | MS.gene25976:intron | 35.0% | |
| AATGAAAAGAAGAGTGGGAT+TGG | - | chr3.3:65834111-65834130 | None:intergenic | 35.0% | |
| AATTTCACTTGGGCTATGTT+TGG | + | chr3.3:65833551-65833570 | MS.gene25976:intron | 35.0% | |
| ACACAAAAAAGGGGTTACAA+AGG | + | chr3.3:65833079-65833098 | MS.gene25976:intron | 35.0% | |
| ACAGTACCTAACGTGTTTAT+TGG | + | chr3.3:65834926-65834945 | MS.gene25976:CDS | 35.0% | |
| ACCTCACTGTCTAACATAAA+AGG | + | chr3.3:65834562-65834581 | MS.gene25976:intron | 35.0% | |
| AGAAAACCTGAAGACAAAGA+CGG | - | chr3.3:65832151-65832170 | None:intergenic | 35.0% | |
| AGAAGATTCATAACCATCTG+TGG | - | chr3.3:65830891-65830910 | None:intergenic | 35.0% | |
| AGAGAGAAAAAGAAAGAGAG+AGG | + | chr3.3:65835135-65835154 | MS.gene25976:intron | 35.0% | |
| AGGCATACCATAATCGTTAT+CGG | - | chr3.3:65830737-65830756 | None:intergenic | 35.0% | |
| ATAATACTAGATCCCCACTT+TGG | - | chr3.3:65834830-65834849 | None:intergenic | 35.0% | |
| ATAATATCCCTCCTCATGTT+GGG | + | chr3.3:65834514-65834533 | MS.gene25976:intron | 35.0% | |
| ATCCCCACTTTGGATTTAAT+TGG | - | chr3.3:65834820-65834839 | None:intergenic | 35.0% | |
| ATCTTGCTTCGTGTCAATTA+GGG | - | chr3.3:65831992-65832011 | None:intergenic | 35.0% | |
| ATGAAAACAGAACACAACAC+AGG | - | chr3.3:65832027-65832046 | None:intergenic | 35.0% | |
| ATGAAAAGAAGAGTGGGATT+GGG | - | chr3.3:65834110-65834129 | None:intergenic | 35.0% | |
| ATTTCACTTGGGCTATGTTT+GGG | + | chr3.3:65833552-65833571 | MS.gene25976:intron | 35.0% | |
| CACGTCTCTATTAATCAAAG+AGG | - | chr3.3:65831206-65831225 | None:intergenic | 35.0% | |
| CATAACCATCTGTGGAATAT+AGG | - | chr3.3:65830883-65830902 | None:intergenic | 35.0% | |
| CATGCTAAACTAAGTAACCA+TGG | + | chr3.3:65831331-65831350 | MS.gene25976:intron | 35.0% | |
| CCTCATGAAAAAGTAGCTAA+AGG | - | chr3.3:65834991-65835010 | None:intergenic | 35.0% | |
| CTAACGCAATGATACATGTT+GGG | - | chr3.3:65831367-65831386 | None:intergenic | 35.0% | |
| CTCAAAATATGTGGCTTCTA+AGG | - | chr3.3:65834728-65834747 | None:intergenic | 35.0% | |
| CTGTAATTTATGTTGTGGTG+TGG | + | chr3.3:65833283-65833302 | MS.gene25976:intron | 35.0% | |
| CTTATTGTGGTTACTGCAAT+CGG | + | chr3.3:65833314-65833333 | MS.gene25976:CDS | 35.0% | |
| GAATGTTGAAGTTCTTGAGT+CGG | + | chr3.3:65830462-65830481 | MS.gene25976:CDS | 35.0% | |
| GACATGTTTGAATGTTCTTG+AGG | - | chr3.3:65832785-65832804 | None:intergenic | 35.0% | |
| GATGACCAAAACAATCATAC+TGG | - | chr3.3:65834268-65834287 | None:intergenic | 35.0% | |
| GCAAAATATCTTGGAAAGAC+TGG | - | chr3.3:65830551-65830570 | None:intergenic | 35.0% | |
| GCATATTCTGAGCATAACTT+TGG | + | chr3.3:65830436-65830455 | MS.gene25976:CDS | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr3.3:65835192-65835211 | MS.gene25976:intron | 35.0% | |
| TAATGTGCTATCAACCACAT+TGG | + | chr3.3:65831250-65831269 | MS.gene25976:intron | 35.0% | |
| TATAGGGACTTATTAGGCAT+TGG | - | chr3.3:65833129-65833148 | None:intergenic | 35.0% | |
| TCAGCAGGTATTTGTTTATC+TGG | + | chr3.3:65830255-65830274 | MS.gene25976:intron | 35.0% | |
| TCTGCGTGATAAACAATGTT+AGG | - | chr3.3:65831300-65831319 | None:intergenic | 35.0% | |
| TGAATCTTCTGAATTGCCAT+CGG | + | chr3.3:65830901-65830920 | MS.gene25976:intron | 35.0% | |
| TGGTGTGTCTTAAAAATCAC+TGG | + | chr3.3:65832478-65832497 | MS.gene25976:intron | 35.0% | |
| TTACCTATTTGAAGGTGATG+GGG | + | chr3.3:65834862-65834881 | MS.gene25976:intron | 35.0% | |
| TTATTGTGGTTACTGCAATC+GGG | + | chr3.3:65833315-65833334 | MS.gene25976:CDS | 35.0% | |
| ! | AATTTCGGCTTCTCTAAAAG+TGG | + | chr3.3:65832831-65832850 | MS.gene25976:intron | 35.0% |
| ! | ACCTTTTATGTTAGACAGTG+AGG | - | chr3.3:65834566-65834585 | None:intergenic | 35.0% |
| ! | CCGTTTATGATTAGTTGATC+TGG | - | chr3.3:65833901-65833920 | None:intergenic | 35.0% |
| ! | GAAGCCGAAATTGATTCTAA+AGG | - | chr3.3:65832823-65832842 | None:intergenic | 35.0% |
| ! | GGTTTTGCTGGAAAAAACAA+AGG | + | chr3.3:65834583-65834602 | MS.gene25976:intron | 35.0% |
| ! | GTATTGGTAGAAGACTTTAG+AGG | + | chr3.3:65833662-65833681 | MS.gene25976:intron | 35.0% |
| ! | TAGTCCTCACATTCAACTTT+TGG | - | chr3.3:65833462-65833481 | None:intergenic | 35.0% |
| ! | TTGAAGTTGTGGAGATTTTG+TGG | - | chr3.3:65831421-65831440 | None:intergenic | 35.0% |
| !! | TTGTTTTGTTGCCCCTTTTT+AGG | + | chr3.3:65833484-65833503 | MS.gene25976:intron | 35.0% |
| !!! | CAGTGATTTTTAGGGTTTAG+GGG | + | chr3.3:65832253-65832272 | MS.gene25976:intron | 35.0% |
| !!! | CCAGTGATTTTTAGGGTTTA+GGG | + | chr3.3:65832252-65832271 | MS.gene25976:intron | 35.0% |
| !!! | CCTTTAGCTACTTTTTCATG+AGG | + | chr3.3:65834988-65835007 | MS.gene25976:intron | 35.0% |
| AAAAAAATGAGGAGGGGTGA+TGG | - | chr3.3:65834194-65834213 | None:intergenic | 40.0% | |
| AAAACCTGAAGACAAAGACG+GGG | - | chr3.3:65832149-65832168 | None:intergenic | 40.0% | |
| AACTGCCATGAACAAAGCTA+AGG | + | chr3.3:65832107-65832126 | MS.gene25976:CDS | 40.0% | |
| AAGGATCTACTCAAACAGCT+GGG | + | chr3.3:65833340-65833359 | MS.gene25976:CDS | 40.0% | |
| AATCTCCACAACTTCAAGCA+TGG | + | chr3.3:65831424-65831443 | MS.gene25976:intron | 40.0% | |
| AGGAGGGATATTATGAACCT+TGG | - | chr3.3:65834508-65834527 | None:intergenic | 40.0% | |
| ATTGTAAGGAACCCAACATG+AGG | - | chr3.3:65834528-65834547 | None:intergenic | 40.0% | |
| CAAATAGAGTGCAACGAGAA+TGG | + | chr3.3:65830694-65830713 | MS.gene25976:intron | 40.0% | |
| CATAATATCCCTCCTCATGT+TGG | + | chr3.3:65834513-65834532 | MS.gene25976:intron | 40.0% | |
| CCAACATGTATCATTGCGTT+AGG | + | chr3.3:65831365-65831384 | MS.gene25976:intron | 40.0% | |
| CCCTAAACCCTAAAAATCAC+TGG | - | chr3.3:65832255-65832274 | None:intergenic | 40.0% | |
| CCGGAAATGAAAAGAAGAGT+GGG | - | chr3.3:65834116-65834135 | None:intergenic | 40.0% | |
| CCTAACGCAATGATACATGT+TGG | - | chr3.3:65831368-65831387 | None:intergenic | 40.0% | |
| CTCTTTAATGAAAAGGGACG+TGG | + | chr3.3:65832588-65832607 | MS.gene25976:intron | 40.0% | |
| CTTGTCATCAAAATTTGGCG+CGG | - | chr3.3:65831950-65831969 | None:intergenic | 40.0% | |
| GAAAACCTGAAGACAAAGAC+GGG | - | chr3.3:65832150-65832169 | None:intergenic | 40.0% | |
| GAGCTGCATTTGGATCAATT+AGG | - | chr3.3:65830932-65830951 | None:intergenic | 40.0% | |
| GATCAATTAGGTTCATCCGA+TGG | - | chr3.3:65830920-65830939 | None:intergenic | 40.0% | |
| GATCTTGCTTCGTGTCAATT+AGG | - | chr3.3:65831993-65832012 | None:intergenic | 40.0% | |
| GATGTTCCCGATAACGATTA+TGG | + | chr3.3:65830727-65830746 | MS.gene25976:intron | 40.0% | |
| GGCATACCATAATCGTTATC+GGG | - | chr3.3:65830736-65830755 | None:intergenic | 40.0% | |
| GGTTCAATTAGAGCTGCATT+TGG | - | chr3.3:65830942-65830961 | None:intergenic | 40.0% | |
| GTACCTAACGTGTTTATTGG+AGG | + | chr3.3:65834929-65834948 | MS.gene25976:CDS | 40.0% | |
| GTCAACCTATATTCCACAGA+TGG | + | chr3.3:65830875-65830894 | MS.gene25976:intron | 40.0% | |
| GTCCAATTCAATGACCTTGT+GGG | - | chr3.3:65833371-65833390 | None:intergenic | 40.0% | |
| TAAGCTCAGTTTGAGAGGTT+TGG | - | chr3.3:65833833-65833852 | None:intergenic | 40.0% | |
| TACATTTCGGGAGGTTCATT+TGG | - | chr3.3:65830963-65830982 | None:intergenic | 40.0% | |
| TCATGTTGGGTTCCTTACAA+TGG | + | chr3.3:65834527-65834546 | MS.gene25976:intron | 40.0% | |
| TCTATGTATGTCTCCTTACG+TGG | + | chr3.3:65830993-65831012 | MS.gene25976:intron | 40.0% | |
| TGTCCAATTCAATGACCTTG+TGG | - | chr3.3:65833372-65833391 | None:intergenic | 40.0% | |
| TGTGGCAGTAAGACTTATTG+TGG | + | chr3.3:65833301-65833320 | MS.gene25976:intron | 40.0% | |
| TGTTAGACAGTGAGGTTCAT+CGG | - | chr3.3:65834558-65834577 | None:intergenic | 40.0% | |
| TTCGTGTCAATTAGGGTTTG+TGG | - | chr3.3:65831985-65832004 | None:intergenic | 40.0% | |
| TTGCCTCCAATAAACACGTT+AGG | - | chr3.3:65834935-65834954 | None:intergenic | 40.0% | |
| TTGGTGTGCAAGCAAACTAT+TGG | + | chr3.3:65831269-65831288 | MS.gene25976:intron | 40.0% | |
| TTTATTGGAGGCAAGCACAT+TGG | + | chr3.3:65834941-65834960 | MS.gene25976:CDS | 40.0% | |
| ! | CATTGGTGGTTGTGATTGTA+AGG | + | chr3.3:65834958-65834977 | MS.gene25976:intron | 40.0% |
| ! | CATTTGTTGACAGGGGAAAA+TGG | + | chr3.3:65830601-65830620 | MS.gene25976:intron | 40.0% |
| ! | CCCACTCTTCTTTTCATTTC+CGG | + | chr3.3:65834113-65834132 | MS.gene25976:intron | 40.0% |
| ! | CTTGAGTCGGTGAATTTTTG+AGG | + | chr3.3:65830475-65830494 | MS.gene25976:intron | 40.0% |
| ! | GCTATTGACTGTAGCTTACA+TGG | + | chr3.3:65830569-65830588 | MS.gene25976:intron | 40.0% |
| ! | TACCTATTTGAAGGTGATGG+GGG | + | chr3.3:65834863-65834882 | MS.gene25976:intron | 40.0% |
| ! | TTTAAGACATCACTACCCTG+TGG | - | chr3.3:65830382-65830401 | None:intergenic | 40.0% |
| ! | TTTTCCCCTGTCAACAAATG+TGG | - | chr3.3:65830601-65830620 | None:intergenic | 40.0% |
| !! | AATATGTGGCTTCTAAGGTG+AGG | - | chr3.3:65834723-65834742 | None:intergenic | 40.0% |
| !! | ACTTGTTGTCTTTCACACGT+AGG | + | chr3.3:65833239-65833258 | MS.gene25976:intron | 40.0% |
| !! | ATATGTGGCTTCTAAGGTGA+GGG | - | chr3.3:65834722-65834741 | None:intergenic | 40.0% |
| !! | GATCTCCTTAGCTTTGTTCA+TGG | - | chr3.3:65832115-65832134 | None:intergenic | 40.0% |
| !!! | CTATGTTTGGGAGTTTTGGA+GGG | + | chr3.3:65833564-65833583 | MS.gene25976:intron | 40.0% |
| !!! | GCCAGTGATTTTTAGGGTTT+AGG | + | chr3.3:65832251-65832270 | MS.gene25976:intron | 40.0% |
| !!! | GTCGGTGAATTTTTGAGGTA+AGG | + | chr3.3:65830480-65830499 | MS.gene25976:intron | 40.0% |
| AAAAGAAGAGTGGGATTGGG+TGG | - | chr3.3:65834107-65834126 | None:intergenic | 45.0% | |
| AAACCTGAAGACAAAGACGG+GGG | - | chr3.3:65832148-65832167 | None:intergenic | 45.0% | |
| AAAGAAGAGTGGGATTGGGT+GGG | - | chr3.3:65834106-65834125 | None:intergenic | 45.0% | |
| AATAGAGACGTGAGCTTGCA+TGG | + | chr3.3:65831214-65831233 | MS.gene25976:intron | 45.0% | |
| ACAGAACACAACACAGGTGT+TGG | - | chr3.3:65832021-65832040 | None:intergenic | 45.0% | |
| ACGAAGGCTGAGTGTATGTT+TGG | - | chr3.3:65832859-65832878 | None:intergenic | 45.0% | |
| AGCCCACAAGGTCATTGAAT+TGG | + | chr3.3:65833366-65833385 | MS.gene25976:CDS | 45.0% | |
| CAAGGATCTACTCAAACAGC+TGG | + | chr3.3:65833339-65833358 | MS.gene25976:CDS | 45.0% | |
| CAATCACAACTGGAACCACA+GGG | + | chr3.3:65830364-65830383 | MS.gene25976:CDS | 45.0% | |
| CAATGTAAACACGCACGTGT+TGG | + | chr3.3:65832611-65832630 | MS.gene25976:intron | 45.0% | |
| CCATGTTCTCATCCACTCAT+CGG | + | chr3.3:65834145-65834164 | MS.gene25976:intron | 45.0% | |
| CTCCACAATTTCAAGCATGG+AGG | + | chr3.3:65831550-65831569 | MS.gene25976:intron | 45.0% | |
| GAGAACATGGAAGAGTTTGC+CGG | - | chr3.3:65834135-65834154 | None:intergenic | 45.0% | |
| GCAAGTAAGCTCAGTTTGAG+AGG | - | chr3.3:65833838-65833857 | None:intergenic | 45.0% | |
| GCCGGAAATGAAAAGAAGAG+TGG | - | chr3.3:65834117-65834136 | None:intergenic | 45.0% | |
| GCGAAGAGCAAAGAAGTGAT+GGG | + | chr3.3:65832084-65832103 | MS.gene25976:CDS | 45.0% | |
| GGAGCAATTAAATCCCTCAC+CGG | - | chr3.3:65834701-65834720 | None:intergenic | 45.0% | |
| TAAGGAACCCAACATGAGGA+GGG | - | chr3.3:65834524-65834543 | None:intergenic | 45.0% | |
| TACGTCGTGTTTCGAAACGA+AGG | - | chr3.3:65832875-65832894 | None:intergenic | 45.0% | |
| TCAGTTTGAGAGGTTTGGAG+AGG | - | chr3.3:65833828-65833847 | None:intergenic | 45.0% | |
| TCATCGGCGATTCCATTGTA+AGG | - | chr3.3:65834542-65834561 | None:intergenic | 45.0% | |
| TGCAGAAAGCCAATCACAAC+TGG | + | chr3.3:65830354-65830373 | MS.gene25976:intron | 45.0% | |
| TGCCTCCATGCTTGAAATTG+TGG | - | chr3.3:65831555-65831574 | None:intergenic | 45.0% | |
| TGCGAAGAGCAAAGAAGTGA+TGG | + | chr3.3:65832083-65832102 | MS.gene25976:CDS | 45.0% | |
| TGCTGGAAAAAACAAAGGGC+AGG | + | chr3.3:65834588-65834607 | MS.gene25976:intron | 45.0% | |
| TTAGATGACGACGATTCAGC+AGG | + | chr3.3:65830240-65830259 | MS.gene25976:CDS | 45.0% | |
| TTCAAGCAGCATTAGCTGAG+TGG | + | chr3.3:65834891-65834910 | MS.gene25976:CDS | 45.0% | |
| ! | ACTAATCATAAACGGTGCCG+AGG | + | chr3.3:65833906-65833925 | MS.gene25976:intron | 45.0% |
| ! | ACTGCACCACATTTGTTGAC+AGG | + | chr3.3:65830592-65830611 | MS.gene25976:intron | 45.0% |
| ! | AGTTTGCTTGCACACCAATG+TGG | - | chr3.3:65831267-65831286 | None:intergenic | 45.0% |
| ! | CTGCACCACATTTGTTGACA+GGG | + | chr3.3:65830593-65830612 | MS.gene25976:intron | 45.0% |
| ! | GGGGATGCCAGTGATTTTTA+GGG | + | chr3.3:65832245-65832264 | MS.gene25976:intron | 45.0% |
| ! | TATTGATGGTACACCGGTGA+GGG | + | chr3.3:65834685-65834704 | MS.gene25976:intron | 45.0% |
| ! | TATTGATGGTACACCGGTGA+GGG | - | chr3.3:65834704-65834685 | None:intergenic | 45.0% |
| ! | TGCACCACATTTGTTGACAG+GGG | + | chr3.3:65830594-65830613 | MS.gene25976:intron | 45.0% |
| ! | TGGGCTATGTTTGGGAGTTT+TGG | + | chr3.3:65833560-65833579 | MS.gene25976:intron | 45.0% |
| ! | TGGGGATGCCAGTGATTTTT+AGG | + | chr3.3:65832244-65832263 | MS.gene25976:intron | 45.0% |
| ! | TTATTGATGGTACACCGGTG+AGG | + | chr3.3:65834684-65834703 | MS.gene25976:intron | 45.0% |
| ! | TTATTGATGGTACACCGGTG+AGG | - | chr3.3:65834703-65834684 | None:intergenic | 45.0% |
| !! | AGCTAAGTGCCCGCTTTTAT+TGG | - | chr3.3:65833162-65833181 | None:intergenic | 45.0% |
| !! | CGCGCCAAATTTTGATGACA+AGG | + | chr3.3:65831948-65831967 | MS.gene25976:intron | 45.0% |
| !! | GCTATGTTTGGGAGTTTTGG+AGG | + | chr3.3:65833563-65833582 | MS.gene25976:intron | 45.0% |
| !!! | CAGCTGTTTTGGAGAAACAC+CGG | + | chr3.3:65835281-65835300 | MS.gene25976:intron | 45.0% |
| AAAAGGGACAACTGTCGCGT+AGG | + | chr3.3:65831515-65831534 | MS.gene25976:intron | 50.0% | |
| AAAGCGGGCACTTAGCTGTT+AGG | + | chr3.3:65833165-65833184 | MS.gene25976:intron | 50.0% | |
| AAAGGGACAACTGTCGCGTA+GGG | + | chr3.3:65831516-65831535 | MS.gene25976:intron | 50.0% | |
| AACAAAGGGCAGGAATTGGG+TGG | + | chr3.3:65834598-65834617 | MS.gene25976:intron | 50.0% | |
| AAGAAGAGTGGGATTGGGTG+GGG | - | chr3.3:65834105-65834124 | None:intergenic | 50.0% | |
| AATTGGGTGGGTCAAGGCAT+AGG | + | chr3.3:65834611-65834630 | MS.gene25976:intron | 50.0% | |
| ACAAAGGGCAGGAATTGGGT+GGG | + | chr3.3:65834599-65834618 | MS.gene25976:intron | 50.0% | |
| AGGGGTTACAAAGGATTGGG+TGG | + | chr3.3:65833088-65833107 | MS.gene25976:intron | 50.0% | |
| ATCTTCTTGCCTCCGATGAG+TGG | - | chr3.3:65834160-65834179 | None:intergenic | 50.0% | |
| ATTGGAGGCAAGCACATTGG+TGG | + | chr3.3:65834944-65834963 | MS.gene25976:CDS | 50.0% | |
| CACCCCCATCACCTTCAAAT+AGG | - | chr3.3:65834868-65834887 | None:intergenic | 50.0% | |
| CAGCATTAGCTGAGTGGACA+GGG | + | chr3.3:65834897-65834916 | MS.gene25976:CDS | 50.0% | |
| CCAATCACAACTGGAACCAC+AGG | + | chr3.3:65830363-65830382 | MS.gene25976:CDS | 50.0% | |
| CCACAATCAGTGCTTCTGTG+TGG | - | chr3.3:65832907-65832926 | None:intergenic | 50.0% | |
| CCGATGAGTGGATGAGAACA+TGG | - | chr3.3:65834148-65834167 | None:intergenic | 50.0% | |
| CCTGTGGTTCCAGTTGTGAT+TGG | - | chr3.3:65830366-65830385 | None:intergenic | 50.0% | |
| CTCCACAACTTCAAGCATGG+AGG | + | chr3.3:65831427-65831446 | MS.gene25976:intron | 50.0% | |
| GAAACACCGGACAGGTCAAT+TGG | + | chr3.3:65835294-65835313 | MS.gene25976:CDS | 50.0% | |
| GCTCCAGCATCATTGAGAAG+GGG | - | chr3.3:65835322-65835341 | None:intergenic | 50.0% | |
| GGAGTAATCAAGTCCCTCAC+CGG | + | chr3.3:65833999-65834018 | MS.gene25976:intron | 50.0% | |
| GGCTCCAGCATCATTGAGAA+GGG | - | chr3.3:65835323-65835342 | None:intergenic | 50.0% | |
| GGGGTTACAAAGGATTGGGT+GGG | + | chr3.3:65833089-65833108 | MS.gene25976:intron | 50.0% | |
| GGGTTACAAAGGATTGGGTG+GGG | + | chr3.3:65833090-65833109 | MS.gene25976:intron | 50.0% | |
| GTAAGGAACCCAACATGAGG+AGG | - | chr3.3:65834525-65834544 | None:intergenic | 50.0% | |
| GTTCCCCTTCTCAATGATGC+TGG | + | chr3.3:65835316-65835335 | MS.gene25976:CDS | 50.0% | |
| GTTTGAGAGGTTTGGAGAGG+AGG | - | chr3.3:65833825-65833844 | None:intergenic | 50.0% | |
| TACAAAGGATTGGGTGGGGT+GGG | + | chr3.3:65833094-65833113 | MS.gene25976:intron | 50.0% | |
| TGAGGGTGGCTTCTAAGTTG+AGG | + | chr3.3:65833977-65833996 | MS.gene25976:intron | 50.0% | |
| TGCCTCCATGCTTGAAGTTG+TGG | - | chr3.3:65831432-65831451 | None:intergenic | 50.0% | |
| TGGCTCCAGCATCATTGAGA+AGG | - | chr3.3:65835324-65835343 | None:intergenic | 50.0% | |
| TGGTTACTGCAATCGGGTCA+AGG | + | chr3.3:65833321-65833340 | MS.gene25976:CDS | 50.0% | |
| TGTCCAAGCGTTTGACGCTA+GGG | + | chr3.3:65832642-65832661 | MS.gene25976:intron | 50.0% | |
| TGTTCTCATCCACTCATCGG+AGG | + | chr3.3:65834148-65834167 | MS.gene25976:intron | 50.0% | |
| TTACAAAGGATTGGGTGGGG+TGG | + | chr3.3:65833093-65833112 | MS.gene25976:intron | 50.0% | |
| ! | GAGGGTGGCTTCTAAGTTGA+GGG | + | chr3.3:65833978-65833997 | MS.gene25976:intron | 50.0% |
| ! | GTAAACACGCACGTGTTGGT+TGG | + | chr3.3:65832615-65832634 | MS.gene25976:intron | 50.0% |
| !! | CCACACAGAAGCACTGATTG+TGG | + | chr3.3:65832904-65832923 | MS.gene25976:intron | 50.0% |
| !! | TCATGGCATCGACCCTGTTA+CGG | - | chr3.3:65831748-65831767 | None:intergenic | 50.0% |
| !!! | GTTTGGGAGTTTTGGAGGGA+AGG | + | chr3.3:65833568-65833587 | MS.gene25976:intron | 50.0% |
| !!! | GTTTTGGAGAAACACCGGAC+AGG | + | chr3.3:65835286-65835305 | MS.gene25976:CDS | 50.0% |
| AACCCCTAGCGTCAAACGCT+TGG | - | chr3.3:65832648-65832667 | None:intergenic | 55.0% | |
| AATGACCCGTGCGTTAGCAC+GGG | + | chr3.3:65831891-65831910 | MS.gene25976:intron | 55.0% | |
| ACAAAGGATTGGGTGGGGTG+GGG | + | chr3.3:65833095-65833114 | MS.gene25976:intron | 55.0% | |
| AGGTTTGGAGAGGAGGAGAG+AGG | - | chr3.3:65833818-65833837 | None:intergenic | 55.0% | |
| AGTGCTTCTGTGTGGACGTC+AGG | - | chr3.3:65832899-65832918 | None:intergenic | 55.0% | |
| ATTGACCCGTGCTAACGCAC+GGG | - | chr3.3:65831899-65831918 | None:intergenic | 55.0% | |
| CATCCCCCGTCTTTGTCTTC+AGG | + | chr3.3:65832142-65832161 | MS.gene25976:CDS | 55.0% | |
| CATTGACCCGTGCTAACGCA+CGG | - | chr3.3:65831900-65831919 | None:intergenic | 55.0% | |
| GAATGACCCGTGCGTTAGCA+CGG | + | chr3.3:65831890-65831909 | MS.gene25976:intron | 55.0% | |
| GACAAAGACGGGGGATGAAG+CGG | - | chr3.3:65832139-65832158 | None:intergenic | 55.0% | |
| GCAGCATTAGCTGAGTGGAC+AGG | + | chr3.3:65834896-65834915 | MS.gene25976:CDS | 55.0% | |
| GGGGAACCAATTGACCTGTC+CGG | - | chr3.3:65835303-65835322 | None:intergenic | 55.0% | |
| GGTTTGGAGAGGAGGAGAGA+GGG | - | chr3.3:65833817-65833836 | None:intergenic | 55.0% | |
| GTCCAAGCGTTTGACGCTAG+GGG | + | chr3.3:65832643-65832662 | MS.gene25976:intron | 55.0% | |
| GTGTCCAAGCGTTTGACGCT+AGG | + | chr3.3:65832641-65832660 | MS.gene25976:intron | 55.0% | |
| GTTTGGAGAGGAGGAGAGAG+GGG | - | chr3.3:65833816-65833835 | None:intergenic | 55.0% | |
| TAGCTGAGTGGACAGGGCAA+AGG | + | chr3.3:65834903-65834922 | MS.gene25976:CDS | 55.0% | |
| AAAGGATTGGGTGGGGTGGG+GGG | + | chr3.3:65833097-65833116 | MS.gene25976:intron | 60.0% | |
| CAAAGGATTGGGTGGGGTGG+GGG | + | chr3.3:65833096-65833115 | MS.gene25976:intron | 60.0% | |
| GATTGGGTGGGGCAAGGCAT+AGG | - | chr3.3:65834094-65834113 | None:intergenic | 60.0% | |
| GGCAGGAATTGGGTGGGTCA+AGG | + | chr3.3:65834605-65834624 | MS.gene25976:intron | 60.0% | |
| ! | ATGAGGAGGGGTGATGGCGA+AGG | - | chr3.3:65834188-65834207 | None:intergenic | 60.0% |
| AAGGATTGGGTGGGGTGGGG+GGG | + | chr3.3:65833098-65833117 | MS.gene25976:intron | 65.0% | |
| ACAGCTGGGAGCAGCCCACA+AGG | + | chr3.3:65833354-65833373 | MS.gene25976:CDS | 65.0% | |
| GAGTGGGATTGGGTGGGGCA+AGG | - | chr3.3:65834100-65834119 | None:intergenic | 65.0% | |
| TGGAGAGGAGGAGAGAGGGG+AGG | - | chr3.3:65833813-65833832 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 65830204 | 65835360 | 65830204 | ID=MS.gene25976 |
| chr3.3 | mRNA | 65830204 | 65835360 | 65830204 | ID=MS.gene25976.t1;Parent=MS.gene25976 |
| chr3.3 | exon | 65830204 | 65830261 | 65830204 | ID=MS.gene25976.t1.exon1;Parent=MS.gene25976.t1 |
| chr3.3 | CDS | 65830204 | 65830261 | 65830204 | ID=cds.MS.gene25976.t1;Parent=MS.gene25976.t1 |
| chr3.3 | exon | 65830359 | 65830483 | 65830359 | ID=MS.gene25976.t1.exon2;Parent=MS.gene25976.t1 |
| chr3.3 | CDS | 65830359 | 65830483 | 65830359 | ID=cds.MS.gene25976.t1;Parent=MS.gene25976.t1 |
| chr3.3 | exon | 65832078 | 65832163 | 65832078 | ID=MS.gene25976.t1.exon3;Parent=MS.gene25976.t1 |
| chr3.3 | CDS | 65832078 | 65832163 | 65832078 | ID=cds.MS.gene25976.t1;Parent=MS.gene25976.t1 |
| chr3.3 | exon | 65833309 | 65833397 | 65833309 | ID=MS.gene25976.t1.exon4;Parent=MS.gene25976.t1 |
| chr3.3 | CDS | 65833309 | 65833397 | 65833309 | ID=cds.MS.gene25976.t1;Parent=MS.gene25976.t1 |
| chr3.3 | exon | 65834876 | 65834974 | 65834876 | ID=MS.gene25976.t1.exon5;Parent=MS.gene25976.t1 |
| chr3.3 | CDS | 65834876 | 65834974 | 65834876 | ID=cds.MS.gene25976.t1;Parent=MS.gene25976.t1 |
| chr3.3 | exon | 65835284 | 65835360 | 65835284 | ID=MS.gene25976.t1.exon6;Parent=MS.gene25976.t1 |
| chr3.3 | CDS | 65835284 | 65835360 | 65835284 | ID=cds.MS.gene25976.t1;Parent=MS.gene25976.t1 |
| Gene Sequence |
| Protein sequence |
