Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27961.t1 | XP_003630005.1 | 96.5 | 839 | 29 | 0 | 1 | 839 | 12 | 850 | 0.00E+00 | 1608.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27961.t1 | Q9SUN6 | 67.0 | 820 | 263 | 4 | 28 | 839 | 34 | 853 | 0.0e+00 | 1080.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27961.t1 | G7L9K7 | 96.5 | 839 | 29 | 0 | 1 | 839 | 12 | 850 | 0.0e+00 | 1608.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050170 | MS.gene27961 | -0.812816 | 3.51E-51 | -1.69E-46 |
MS.gene050710 | MS.gene27961 | 0.806653 | 7.41E-50 | -1.69E-46 |
MS.gene051552 | MS.gene27961 | 0.81848 | 1.92E-52 | -1.69E-46 |
MS.gene051838 | MS.gene27961 | -0.801189 | 1.01E-48 | -1.69E-46 |
MS.gene052015 | MS.gene27961 | 0.828992 | 6.61E-55 | -1.69E-46 |
MS.gene052169 | MS.gene27961 | 0.810645 | 1.04E-50 | -1.69E-46 |
MS.gene052494 | MS.gene27961 | 0.828123 | 1.07E-54 | -1.69E-46 |
MS.gene052825 | MS.gene27961 | -0.804123 | 2.51E-49 | -1.69E-46 |
MS.gene053097 | MS.gene27961 | 0.81935 | 1.22E-52 | -1.69E-46 |
MS.gene053203 | MS.gene27961 | -0.814027 | 1.90E-51 | -1.69E-46 |
MS.gene053421 | MS.gene27961 | 0.800668 | 1.29E-48 | -1.69E-46 |
MS.gene054662 | MS.gene27961 | 0.825724 | 4.01E-54 | -1.69E-46 |
MS.gene054706 | MS.gene27961 | 0.829841 | 4.11E-55 | -1.69E-46 |
MS.gene05470 | MS.gene27961 | -0.804019 | 2.64E-49 | -1.69E-46 |
MS.gene055158 | MS.gene27961 | 0.804102 | 2.54E-49 | -1.69E-46 |
MS.gene055159 | MS.gene27961 | 0.814161 | 1.77E-51 | -1.69E-46 |
MS.gene05589 | MS.gene27961 | -0.808466 | 3.06E-50 | -1.69E-46 |
MS.gene056387 | MS.gene27961 | -0.811159 | 8.05E-51 | -1.69E-46 |
MS.gene056680 | MS.gene27961 | 0.813238 | 2.83E-51 | -1.69E-46 |
MS.gene057081 | MS.gene27961 | 0.835036 | 2.12E-56 | -1.69E-46 |
MS.gene058157 | MS.gene27961 | -0.816811 | 4.56E-52 | -1.69E-46 |
MS.gene058418 | MS.gene27961 | 0.837564 | 4.82E-57 | -1.69E-46 |
MS.gene059103 | MS.gene27961 | 0.801585 | 8.40E-49 | -1.69E-46 |
MS.gene05914 | MS.gene27961 | -0.80024 | 1.58E-48 | -1.69E-46 |
MS.gene05926 | MS.gene27961 | 0.800319 | 1.52E-48 | -1.69E-46 |
MS.gene059303 | MS.gene27961 | -0.809737 | 1.63E-50 | -1.69E-46 |
MS.gene059480 | MS.gene27961 | 0.805218 | 1.48E-49 | -1.69E-46 |
MS.gene05960 | MS.gene27961 | 0.843852 | 1.09E-58 | -1.69E-46 |
MS.gene06000 | MS.gene27961 | -0.812394 | 4.33E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27961.t1 | MTR_8g089230 | 96.544 | 839 | 29 | 0 | 1 | 839 | 12 | 850 | 0.0 | 1677 |
MS.gene27961.t1 | MTR_2g046740 | 76.400 | 839 | 193 | 2 | 6 | 839 | 5 | 843 | 0.0 | 1288 |
MS.gene27961.t1 | MTR_4g127480 | 46.633 | 802 | 410 | 9 | 34 | 832 | 25 | 811 | 0.0 | 688 |
MS.gene27961.t1 | MTR_2g037850 | 44.000 | 825 | 443 | 10 | 10 | 832 | 4 | 811 | 0.0 | 653 |
MS.gene27961.t1 | MTR_4g132620 | 41.538 | 845 | 454 | 16 | 1 | 835 | 1 | 815 | 0.0 | 589 |
MS.gene27961.t1 | MTR_4g125180 | 34.316 | 746 | 417 | 25 | 107 | 833 | 59 | 750 | 3.45e-101 | 331 |
MS.gene27961.t1 | MTR_2g042130 | 32.935 | 753 | 420 | 27 | 107 | 833 | 78 | 771 | 4.59e-96 | 318 |
MS.gene27961.t1 | MTR_4g134320 | 31.777 | 771 | 449 | 23 | 86 | 834 | 50 | 765 | 1.58e-95 | 316 |
MS.gene27961.t1 | MTR_8g072440 | 33.102 | 719 | 415 | 21 | 107 | 816 | 32 | 693 | 6.58e-94 | 310 |
MS.gene27961.t1 | MTR_4g102400 | 32.889 | 751 | 420 | 28 | 67 | 805 | 43 | 721 | 9.65e-94 | 311 |
MS.gene27961.t1 | MTR_8g072440 | 33.100 | 713 | 423 | 19 | 107 | 816 | 74 | 735 | 3.23e-93 | 310 |
MS.gene27961.t1 | MTR_4g095360 | 33.020 | 745 | 427 | 25 | 107 | 834 | 65 | 754 | 8.10e-93 | 308 |
MS.gene27961.t1 | MTR_3g082200 | 30.800 | 750 | 441 | 23 | 107 | 834 | 76 | 769 | 1.12e-92 | 308 |
MS.gene27961.t1 | MTR_5g011320 | 31.398 | 844 | 460 | 30 | 8 | 837 | 10 | 748 | 2.70e-92 | 307 |
MS.gene27961.t1 | MTR_7g098630 | 33.523 | 704 | 385 | 22 | 107 | 790 | 67 | 707 | 3.22e-91 | 307 |
MS.gene27961.t1 | MTR_5g025010 | 33.287 | 715 | 421 | 22 | 107 | 816 | 69 | 732 | 4.03e-91 | 304 |
MS.gene27961.t1 | MTR_5g025010 | 33.287 | 715 | 421 | 22 | 107 | 816 | 37 | 700 | 4.07e-91 | 303 |
MS.gene27961.t1 | MTR_4g073540 | 32.063 | 761 | 427 | 28 | 107 | 834 | 64 | 767 | 7.02e-91 | 303 |
MS.gene27961.t1 | MTR_1g079120 | 32.773 | 714 | 398 | 25 | 107 | 803 | 76 | 724 | 8.67e-91 | 303 |
MS.gene27961.t1 | MTR_5g011340 | 32.010 | 781 | 449 | 27 | 68 | 837 | 44 | 753 | 4.73e-90 | 301 |
MS.gene27961.t1 | MTR_7g098070 | 30.740 | 797 | 447 | 30 | 72 | 834 | 36 | 761 | 2.07e-89 | 300 |
MS.gene27961.t1 | MTR_5g016120 | 32.754 | 748 | 425 | 24 | 91 | 818 | 56 | 745 | 2.19e-88 | 296 |
MS.gene27961.t1 | MTR_4g103400 | 30.307 | 749 | 456 | 22 | 107 | 834 | 73 | 776 | 8.40e-88 | 295 |
MS.gene27961.t1 | MTR_8g022870 | 30.541 | 776 | 469 | 24 | 91 | 840 | 50 | 781 | 1.13e-87 | 295 |
MS.gene27961.t1 | MTR_5g085690 | 32.036 | 771 | 462 | 27 | 91 | 835 | 55 | 789 | 1.56e-87 | 295 |
MS.gene27961.t1 | MTR_1g102350 | 30.679 | 766 | 450 | 27 | 93 | 834 | 68 | 776 | 1.62e-87 | 295 |
MS.gene27961.t1 | MTR_5g011190 | 31.918 | 777 | 443 | 27 | 75 | 835 | 48 | 754 | 3.01e-87 | 293 |
MS.gene27961.t1 | MTR_8g021130 | 31.691 | 751 | 436 | 25 | 107 | 833 | 76 | 773 | 4.05e-87 | 294 |
MS.gene27961.t1 | MTR_4g103450 | 31.642 | 749 | 439 | 29 | 107 | 834 | 47 | 743 | 1.14e-86 | 291 |
MS.gene27961.t1 | MTR_4g103480 | 31.509 | 749 | 440 | 29 | 107 | 834 | 90 | 786 | 2.31e-86 | 292 |
MS.gene27961.t1 | MTR_0047s0120 | 32.376 | 766 | 443 | 28 | 91 | 838 | 52 | 760 | 2.82e-85 | 288 |
MS.gene27961.t1 | MTR_3g082200 | 31.315 | 677 | 399 | 21 | 172 | 834 | 22 | 646 | 2.93e-85 | 285 |
MS.gene27961.t1 | MTR_5g011370 | 31.579 | 779 | 447 | 27 | 75 | 837 | 68 | 776 | 5.34e-85 | 288 |
MS.gene27961.t1 | MTR_8g024380 | 31.782 | 752 | 421 | 26 | 107 | 836 | 79 | 760 | 1.12e-84 | 286 |
MS.gene27961.t1 | MTR_5g011280 | 32.659 | 741 | 417 | 26 | 107 | 835 | 86 | 756 | 1.40e-84 | 286 |
MS.gene27961.t1 | MTR_7g075900 | 31.776 | 749 | 432 | 26 | 107 | 834 | 81 | 771 | 1.50e-84 | 286 |
MS.gene27961.t1 | MTR_7g081580 | 32.759 | 754 | 434 | 29 | 107 | 834 | 77 | 783 | 1.89e-83 | 284 |
MS.gene27961.t1 | MTR_7g081750 | 32.068 | 764 | 447 | 27 | 107 | 837 | 76 | 800 | 4.76e-83 | 283 |
MS.gene27961.t1 | MTR_7g079310 | 31.108 | 749 | 431 | 28 | 107 | 834 | 79 | 763 | 6.43e-83 | 282 |
MS.gene27961.t1 | MTR_8g083220 | 30.799 | 763 | 462 | 21 | 89 | 834 | 61 | 774 | 9.35e-83 | 282 |
MS.gene27961.t1 | MTR_5g011310 | 31.105 | 778 | 452 | 27 | 75 | 837 | 48 | 756 | 1.23e-82 | 281 |
MS.gene27961.t1 | MTR_7g081420 | 31.871 | 775 | 455 | 31 | 91 | 837 | 58 | 787 | 1.26e-82 | 281 |
MS.gene27961.t1 | MTR_7g118080 | 31.356 | 708 | 403 | 23 | 108 | 799 | 79 | 719 | 2.62e-82 | 280 |
MS.gene27961.t1 | MTR_4g103490 | 29.801 | 755 | 455 | 26 | 107 | 834 | 77 | 783 | 1.28e-81 | 279 |
MS.gene27961.t1 | MTR_2g018135 | 31.899 | 790 | 444 | 30 | 87 | 834 | 45 | 782 | 3.81e-81 | 278 |
MS.gene27961.t1 | MTR_3g082200 | 30.758 | 673 | 400 | 21 | 176 | 834 | 11 | 631 | 4.49e-81 | 273 |
MS.gene27961.t1 | MTR_4g103495 | 31.564 | 697 | 413 | 20 | 107 | 787 | 74 | 722 | 7.78e-81 | 276 |
MS.gene27961.t1 | MTR_1g078110 | 30.851 | 752 | 420 | 29 | 107 | 834 | 78 | 753 | 2.14e-80 | 275 |
MS.gene27961.t1 | MTR_4g053630 | 31.572 | 719 | 424 | 24 | 107 | 811 | 42 | 706 | 2.89e-80 | 274 |
MS.gene27961.t1 | MTR_7g081500 | 31.748 | 778 | 451 | 27 | 91 | 837 | 57 | 785 | 1.04e-79 | 273 |
MS.gene27961.t1 | MTR_5g011260 | 32.479 | 702 | 390 | 25 | 107 | 799 | 86 | 712 | 9.30e-79 | 270 |
MS.gene27961.t1 | MTR_7g081380 | 31.592 | 785 | 460 | 29 | 91 | 834 | 58 | 806 | 1.17e-78 | 271 |
MS.gene27961.t1 | MTR_7g481600 | 32.759 | 754 | 434 | 29 | 107 | 834 | 77 | 783 | 1.39e-78 | 271 |
MS.gene27961.t1 | MTR_3g102810 | 31.186 | 776 | 438 | 29 | 89 | 833 | 43 | 753 | 2.16e-78 | 269 |
MS.gene27961.t1 | MTR_7g079300 | 30.220 | 771 | 439 | 29 | 91 | 834 | 67 | 765 | 5.58e-78 | 268 |
MS.gene27961.t1 | MTR_2g018125 | 32.030 | 793 | 438 | 32 | 87 | 834 | 47 | 783 | 2.15e-77 | 267 |
MS.gene27961.t1 | MTR_1g018510 | 33.016 | 630 | 365 | 21 | 92 | 716 | 13 | 590 | 2.74e-77 | 266 |
MS.gene27961.t1 | MTR_3g061110 | 29.907 | 749 | 435 | 28 | 107 | 834 | 73 | 752 | 9.66e-77 | 265 |
MS.gene27961.t1 | MTR_5g011270 | 32.382 | 701 | 392 | 24 | 107 | 799 | 86 | 712 | 9.67e-77 | 265 |
MS.gene27961.t1 | MTR_5g096750 | 30.620 | 774 | 446 | 29 | 91 | 837 | 58 | 767 | 2.41e-76 | 264 |
MS.gene27961.t1 | MTR_4g053630 | 32.412 | 651 | 373 | 23 | 175 | 811 | 32 | 629 | 3.57e-76 | 261 |
MS.gene27961.t1 | MTR_8g024390 | 28.912 | 754 | 442 | 24 | 107 | 834 | 72 | 757 | 3.06e-75 | 261 |
MS.gene27961.t1 | MTR_4g103430 | 29.673 | 765 | 442 | 27 | 107 | 839 | 73 | 773 | 4.49e-75 | 261 |
MS.gene27961.t1 | MTR_8g005710 | 29.793 | 772 | 425 | 26 | 91 | 834 | 16 | 698 | 1.36e-74 | 258 |
MS.gene27961.t1 | MTR_3g104930 | 30.054 | 742 | 432 | 29 | 94 | 807 | 52 | 734 | 2.81e-74 | 258 |
MS.gene27961.t1 | MTR_3g114420 | 30.820 | 756 | 434 | 29 | 91 | 818 | 55 | 749 | 3.54e-74 | 258 |
MS.gene27961.t1 | MTR_8g024420 | 28.021 | 753 | 448 | 26 | 107 | 834 | 38 | 721 | 3.64e-74 | 257 |
MS.gene27961.t1 | MTR_8g033150 | 29.640 | 749 | 425 | 27 | 107 | 834 | 57 | 724 | 9.37e-74 | 256 |
MS.gene27961.t1 | MTR_8g033150 | 29.640 | 749 | 425 | 27 | 107 | 834 | 84 | 751 | 1.99e-73 | 256 |
MS.gene27961.t1 | MTR_8g079900 | 29.704 | 744 | 431 | 26 | 107 | 834 | 74 | 741 | 3.38e-73 | 254 |
MS.gene27961.t1 | MTR_1g048110 | 30.144 | 763 | 426 | 30 | 91 | 834 | 56 | 730 | 3.19e-72 | 252 |
MS.gene27961.t1 | MTR_1g006990 | 29.265 | 762 | 438 | 28 | 91 | 834 | 56 | 734 | 7.18e-72 | 251 |
MS.gene27961.t1 | MTR_1g007030 | 29.513 | 759 | 438 | 27 | 91 | 834 | 56 | 732 | 2.42e-71 | 249 |
MS.gene27961.t1 | MTR_4g053635 | 29.972 | 704 | 426 | 25 | 120 | 811 | 1 | 649 | 1.14e-70 | 246 |
MS.gene27961.t1 | MTR_8g042670 | 30.013 | 763 | 444 | 28 | 90 | 827 | 54 | 751 | 1.29e-70 | 248 |
MS.gene27961.t1 | MTR_4g103495 | 31.009 | 674 | 396 | 22 | 183 | 838 | 3 | 625 | 1.40e-70 | 245 |
MS.gene27961.t1 | MTR_6g055570 | 30.418 | 766 | 419 | 33 | 91 | 834 | 56 | 729 | 2.55e-70 | 246 |
MS.gene27961.t1 | MTR_7g034380 | 28.755 | 779 | 443 | 28 | 81 | 837 | 6 | 694 | 3.00e-70 | 245 |
MS.gene27961.t1 | MTR_8g042710 | 29.909 | 769 | 452 | 28 | 90 | 827 | 45 | 757 | 3.31e-69 | 244 |
MS.gene27961.t1 | MTR_2g049200 | 29.694 | 751 | 438 | 27 | 107 | 834 | 72 | 755 | 1.41e-68 | 242 |
MS.gene27961.t1 | MTR_5g055920 | 30.339 | 679 | 402 | 29 | 175 | 834 | 40 | 666 | 2.17e-68 | 240 |
MS.gene27961.t1 | MTR_7g075890 | 29.945 | 728 | 397 | 25 | 107 | 808 | 230 | 870 | 5.44e-68 | 243 |
MS.gene27961.t1 | MTR_8g006680 | 30.603 | 696 | 376 | 27 | 91 | 771 | 54 | 657 | 8.94e-68 | 239 |
MS.gene27961.t1 | MTR_8g005300 | 30.603 | 696 | 376 | 27 | 91 | 771 | 54 | 657 | 8.94e-68 | 239 |
MS.gene27961.t1 | MTR_8g005640 | 30.603 | 696 | 376 | 27 | 91 | 771 | 54 | 657 | 8.94e-68 | 239 |
MS.gene27961.t1 | MTR_3g464790 | 29.290 | 775 | 441 | 28 | 55 | 806 | 13 | 703 | 1.13e-67 | 239 |
MS.gene27961.t1 | MTR_3g010080 | 30.508 | 767 | 426 | 32 | 91 | 838 | 55 | 733 | 1.65e-67 | 239 |
MS.gene27961.t1 | MTR_8g079900 | 29.404 | 721 | 409 | 26 | 134 | 834 | 3 | 643 | 2.80e-67 | 236 |
MS.gene27961.t1 | MTR_8g024370 | 29.084 | 753 | 445 | 27 | 107 | 834 | 68 | 756 | 2.42e-65 | 233 |
MS.gene27961.t1 | MTR_7g104200 | 30.812 | 727 | 404 | 27 | 82 | 787 | 44 | 692 | 1.62e-64 | 231 |
MS.gene27961.t1 | MTR_8g042670 | 30.448 | 670 | 388 | 24 | 175 | 827 | 19 | 627 | 8.74e-64 | 226 |
MS.gene27961.t1 | MTR_3g114410 | 29.623 | 584 | 341 | 24 | 86 | 652 | 50 | 580 | 7.32e-51 | 188 |
MS.gene27961.t1 | MTR_4g071560 | 29.573 | 585 | 326 | 17 | 107 | 682 | 37 | 544 | 5.64e-47 | 176 |
MS.gene27961.t1 | MTR_8g042710 | 30.000 | 590 | 340 | 23 | 90 | 654 | 45 | 586 | 5.83e-46 | 176 |
MS.gene27961.t1 | MTR_2g042640 | 28.190 | 674 | 347 | 25 | 104 | 771 | 41 | 583 | 3.27e-45 | 172 |
MS.gene27961.t1 | MTR_6g075370 | 30.481 | 374 | 233 | 11 | 91 | 459 | 54 | 405 | 6.96e-41 | 160 |
MS.gene27961.t1 | MTR_6g075370 | 31.250 | 336 | 186 | 12 | 492 | 805 | 347 | 659 | 2.57e-26 | 115 |
MS.gene27961.t1 | MTR_8g027260 | 35.127 | 316 | 175 | 8 | 91 | 403 | 56 | 344 | 4.04e-39 | 155 |
MS.gene27961.t1 | MTR_8g027260 | 31.890 | 254 | 143 | 8 | 559 | 802 | 386 | 619 | 3.63e-23 | 105 |
MS.gene27961.t1 | MTR_6g055410 | 30.997 | 371 | 219 | 10 | 91 | 459 | 56 | 391 | 1.91e-37 | 150 |
MS.gene27961.t1 | MTR_6g055410 | 31.544 | 298 | 170 | 12 | 554 | 839 | 440 | 715 | 1.10e-25 | 114 |
MS.gene27961.t1 | MTR_2g042650 | 26.628 | 691 | 328 | 28 | 91 | 771 | 56 | 577 | 4.29e-36 | 145 |
MS.gene27961.t1 | MTR_7g079295 | 34.007 | 297 | 176 | 8 | 107 | 398 | 81 | 362 | 2.93e-35 | 141 |
MS.gene27961.t1 | MTR_2g044630 | 32.796 | 372 | 206 | 15 | 91 | 458 | 56 | 387 | 3.15e-35 | 144 |
MS.gene27961.t1 | MTR_2g044630 | 31.156 | 199 | 114 | 6 | 581 | 771 | 457 | 640 | 3.07e-17 | 87.0 |
MS.gene27961.t1 | MTR_5g081100 | 28.261 | 368 | 207 | 10 | 93 | 459 | 24 | 335 | 1.02e-30 | 126 |
MS.gene27961.t1 | MTR_5g081280 | 29.706 | 340 | 178 | 16 | 64 | 390 | 6 | 297 | 1.27e-29 | 120 |
MS.gene27961.t1 | MTR_7g108950 | 68.421 | 76 | 24 | 0 | 625 | 700 | 32 | 107 | 3.40e-26 | 103 |
MS.gene27961.t1 | MTR_3g452290 | 31.132 | 318 | 178 | 14 | 148 | 459 | 17 | 299 | 1.23e-24 | 109 |
MS.gene27961.t1 | MTR_3g452290 | 29.032 | 341 | 179 | 12 | 497 | 814 | 250 | 550 | 6.34e-16 | 82.4 |
MS.gene27961.t1 | MTR_3g451220 | 31.132 | 318 | 178 | 14 | 148 | 459 | 17 | 299 | 1.23e-24 | 109 |
MS.gene27961.t1 | MTR_3g451220 | 29.032 | 341 | 179 | 12 | 497 | 814 | 250 | 550 | 6.34e-16 | 82.4 |
MS.gene27961.t1 | MTR_4g126230 | 36.082 | 194 | 95 | 7 | 558 | 745 | 54 | 224 | 4.63e-21 | 94.0 |
MS.gene27961.t1 | MTR_3g114140 | 27.760 | 317 | 174 | 12 | 513 | 792 | 121 | 419 | 2.16e-20 | 95.1 |
MS.gene27961.t1 | MTR_3g114160 | 27.492 | 331 | 178 | 13 | 107 | 431 | 8 | 282 | 1.09e-18 | 89.4 |
MS.gene27961.t1 | MTR_2g070250 | 33.708 | 178 | 100 | 3 | 203 | 380 | 106 | 265 | 1.16e-17 | 86.7 |
MS.gene27961.t1 | MTR_2g070260 | 30.000 | 210 | 124 | 7 | 621 | 822 | 1 | 195 | 2.39e-17 | 82.0 |
MS.gene27961.t1 | MTR_1g107155 | 64.407 | 59 | 21 | 0 | 642 | 700 | 29 | 87 | 3.32e-15 | 72.0 |
MS.gene27961.t1 | MTR_5g044060 | 43.396 | 106 | 52 | 4 | 559 | 661 | 13 | 113 | 4.08e-14 | 72.0 |
MS.gene27961.t1 | MTR_5g011300 | 40.625 | 96 | 49 | 1 | 621 | 716 | 1 | 88 | 1.50e-13 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27961.t1 | AT4G20430 | 65.457 | 854 | 279 | 7 | 1 | 839 | 1 | 853 | 0.0 | 1129 |
MS.gene27961.t1 | AT4G20430 | 65.457 | 854 | 279 | 7 | 1 | 839 | 1 | 853 | 0.0 | 1129 |
MS.gene27961.t1 | AT5G44530 | 64.243 | 839 | 283 | 3 | 7 | 839 | 11 | 838 | 0.0 | 1113 |
MS.gene27961.t1 | AT5G44530 | 62.384 | 864 | 283 | 4 | 7 | 839 | 11 | 863 | 0.0 | 1098 |
MS.gene27961.t1 | AT4G20430 | 63.658 | 853 | 272 | 8 | 1 | 839 | 1 | 829 | 0.0 | 1078 |
MS.gene27961.t1 | AT1G30600 | 62.694 | 839 | 294 | 5 | 8 | 840 | 7 | 832 | 0.0 | 1073 |
MS.gene27961.t1 | AT5G44530 | 63.339 | 611 | 207 | 3 | 7 | 611 | 11 | 610 | 0.0 | 803 |
MS.gene27961.t1 | AT2G19170 | 45.477 | 807 | 419 | 12 | 31 | 832 | 18 | 808 | 0.0 | 653 |
MS.gene27961.t1 | AT2G19170 | 45.477 | 807 | 419 | 12 | 31 | 832 | 18 | 808 | 0.0 | 653 |
MS.gene27961.t1 | AT4G30020 | 44.240 | 816 | 439 | 10 | 20 | 832 | 7 | 809 | 0.0 | 652 |
MS.gene27961.t1 | AT4G30020 | 44.240 | 816 | 439 | 10 | 20 | 832 | 7 | 809 | 0.0 | 652 |
MS.gene27961.t1 | AT4G30020 | 44.240 | 816 | 439 | 10 | 20 | 832 | 7 | 809 | 0.0 | 652 |
MS.gene27961.t1 | AT4G30020 | 44.240 | 816 | 439 | 10 | 20 | 832 | 7 | 809 | 0.0 | 652 |
MS.gene27961.t1 | AT1G62340 | 40.289 | 762 | 433 | 12 | 86 | 834 | 77 | 829 | 6.62e-180 | 539 |
MS.gene27961.t1 | AT4G34980 | 33.115 | 764 | 421 | 26 | 102 | 834 | 54 | 758 | 7.31e-97 | 320 |
MS.gene27961.t1 | AT3G14067 | 32.275 | 756 | 426 | 25 | 107 | 834 | 70 | 767 | 2.12e-95 | 316 |
MS.gene27961.t1 | AT3G14240 | 32.032 | 743 | 434 | 24 | 107 | 828 | 63 | 755 | 1.07e-94 | 314 |
MS.gene27961.t1 | AT5G67360 | 32.680 | 765 | 432 | 27 | 91 | 834 | 52 | 754 | 1.36e-91 | 305 |
MS.gene27961.t1 | AT4G10550 | 32.038 | 746 | 445 | 22 | 107 | 838 | 17 | 714 | 6.99e-91 | 302 |
MS.gene27961.t1 | AT4G10550 | 32.038 | 746 | 445 | 22 | 107 | 838 | 17 | 714 | 6.99e-91 | 302 |
MS.gene27961.t1 | AT1G04110 | 32.510 | 769 | 414 | 25 | 107 | 837 | 72 | 773 | 1.03e-90 | 303 |
MS.gene27961.t1 | AT4G10550 | 32.038 | 746 | 445 | 22 | 107 | 838 | 73 | 770 | 1.96e-90 | 303 |
MS.gene27961.t1 | AT4G10550 | 32.038 | 746 | 445 | 22 | 107 | 838 | 89 | 786 | 2.59e-90 | 303 |
MS.gene27961.t1 | AT4G10520 | 32.570 | 786 | 444 | 27 | 68 | 838 | 34 | 748 | 3.00e-89 | 299 |
MS.gene27961.t1 | AT4G10540 | 31.642 | 749 | 445 | 21 | 107 | 838 | 69 | 767 | 1.76e-88 | 297 |
MS.gene27961.t1 | AT1G32960 | 31.641 | 768 | 463 | 21 | 87 | 838 | 48 | 769 | 2.10e-88 | 297 |
MS.gene27961.t1 | AT4G10530 | 32.620 | 748 | 412 | 25 | 107 | 838 | 68 | 739 | 6.70e-87 | 292 |
MS.gene27961.t1 | AT4G10510 | 31.007 | 745 | 453 | 19 | 107 | 838 | 2 | 698 | 1.13e-86 | 291 |
MS.gene27961.t1 | AT4G10510 | 31.007 | 745 | 453 | 19 | 107 | 838 | 61 | 757 | 1.91e-86 | 291 |
MS.gene27961.t1 | AT4G10510 | 31.007 | 745 | 453 | 19 | 107 | 838 | 17 | 713 | 2.46e-86 | 290 |
MS.gene27961.t1 | AT4G10510 | 31.007 | 745 | 453 | 19 | 107 | 838 | 73 | 769 | 3.25e-86 | 291 |
MS.gene27961.t1 | AT1G32950 | 31.989 | 744 | 448 | 18 | 107 | 838 | 17 | 714 | 2.08e-85 | 288 |
MS.gene27961.t1 | AT1G32950 | 31.989 | 744 | 448 | 18 | 107 | 838 | 68 | 765 | 3.20e-85 | 288 |
MS.gene27961.t1 | AT2G04160 | 30.708 | 749 | 444 | 23 | 107 | 834 | 76 | 770 | 3.66e-84 | 285 |
MS.gene27961.t1 | AT5G67090 | 31.044 | 728 | 393 | 23 | 95 | 799 | 49 | 690 | 1.04e-83 | 283 |
MS.gene27961.t1 | AT1G66210 | 31.325 | 747 | 427 | 24 | 107 | 838 | 79 | 754 | 2.99e-82 | 280 |
MS.gene27961.t1 | AT2G05920 | 30.441 | 749 | 438 | 28 | 107 | 833 | 61 | 748 | 4.74e-82 | 279 |
MS.gene27961.t1 | AT5G51750 | 30.544 | 753 | 440 | 25 | 107 | 834 | 80 | 774 | 6.61e-82 | 280 |
MS.gene27961.t1 | AT5G45650 | 30.788 | 799 | 451 | 29 | 86 | 834 | 42 | 788 | 9.77e-82 | 279 |
MS.gene27961.t1 | AT5G45650 | 30.788 | 799 | 451 | 29 | 86 | 834 | 42 | 788 | 9.77e-82 | 279 |
MS.gene27961.t1 | AT1G32940 | 32.038 | 746 | 446 | 20 | 107 | 838 | 17 | 715 | 1.27e-81 | 277 |
MS.gene27961.t1 | AT1G32940 | 32.038 | 746 | 446 | 20 | 107 | 838 | 17 | 715 | 1.27e-81 | 277 |
MS.gene27961.t1 | AT1G32940 | 31.806 | 764 | 459 | 21 | 89 | 838 | 51 | 766 | 2.37e-81 | 278 |
MS.gene27961.t1 | AT5G59810 | 30.064 | 785 | 467 | 27 | 73 | 834 | 49 | 774 | 8.06e-80 | 274 |
MS.gene27961.t1 | AT1G20160 | 29.868 | 760 | 461 | 25 | 94 | 834 | 16 | 722 | 8.19e-80 | 273 |
MS.gene27961.t1 | AT1G66220 | 30.649 | 770 | 440 | 25 | 87 | 837 | 53 | 747 | 1.76e-79 | 272 |
MS.gene27961.t1 | AT1G20160 | 29.868 | 760 | 461 | 25 | 94 | 834 | 55 | 761 | 2.27e-79 | 272 |
MS.gene27961.t1 | AT1G01900 | 30.667 | 750 | 438 | 26 | 108 | 834 | 81 | 771 | 4.09e-78 | 269 |
MS.gene27961.t1 | AT5G03620 | 31.370 | 781 | 425 | 29 | 88 | 832 | 51 | 756 | 9.82e-77 | 265 |
MS.gene27961.t1 | AT4G21630 | 31.667 | 780 | 424 | 27 | 89 | 840 | 61 | 759 | 3.30e-76 | 263 |
MS.gene27961.t1 | AT5G11940 | 31.383 | 752 | 417 | 28 | 107 | 834 | 76 | 752 | 1.13e-75 | 262 |
MS.gene27961.t1 | AT1G32970 | 34.437 | 604 | 333 | 20 | 249 | 838 | 172 | 726 | 2.79e-75 | 260 |
MS.gene27961.t1 | AT1G20150 | 29.790 | 762 | 424 | 28 | 91 | 808 | 50 | 744 | 1.19e-74 | 259 |
MS.gene27961.t1 | AT4G26330 | 30.921 | 760 | 437 | 25 | 107 | 836 | 22 | 723 | 1.56e-73 | 255 |
MS.gene27961.t1 | AT4G21326 | 30.223 | 761 | 445 | 22 | 94 | 838 | 1 | 691 | 1.92e-70 | 246 |
MS.gene27961.t1 | AT4G21323 | 30.220 | 771 | 442 | 27 | 87 | 834 | 96 | 793 | 2.02e-70 | 248 |
MS.gene27961.t1 | AT4G26330 | 30.362 | 774 | 437 | 26 | 107 | 836 | 22 | 737 | 8.78e-70 | 245 |
MS.gene27961.t1 | AT5G59100 | 28.590 | 780 | 443 | 28 | 82 | 834 | 45 | 737 | 1.59e-68 | 242 |
MS.gene27961.t1 | AT5G59120 | 28.158 | 760 | 447 | 26 | 91 | 834 | 51 | 727 | 6.56e-68 | 240 |
MS.gene27961.t1 | AT4G21650 | 29.747 | 790 | 431 | 31 | 89 | 840 | 63 | 766 | 3.29e-67 | 238 |
MS.gene27961.t1 | AT5G58840 | 29.904 | 729 | 385 | 27 | 91 | 802 | 55 | 674 | 1.42e-64 | 230 |
MS.gene27961.t1 | AT5G59090 | 29.281 | 765 | 440 | 28 | 91 | 838 | 52 | 732 | 4.16e-64 | 229 |
MS.gene27961.t1 | AT5G03620 | 32.815 | 579 | 325 | 18 | 88 | 654 | 51 | 577 | 1.23e-63 | 224 |
MS.gene27961.t1 | AT4G00230 | 28.188 | 745 | 450 | 24 | 103 | 834 | 71 | 743 | 1.49e-63 | 228 |
MS.gene27961.t1 | AT3G46850 | 29.805 | 718 | 409 | 29 | 91 | 792 | 53 | 691 | 2.41e-63 | 227 |
MS.gene27961.t1 | AT5G59130 | 28.417 | 739 | 428 | 23 | 109 | 834 | 36 | 686 | 3.22e-63 | 226 |
MS.gene27961.t1 | AT5G59090 | 29.281 | 765 | 435 | 29 | 91 | 838 | 52 | 727 | 4.02e-63 | 226 |
MS.gene27961.t1 | AT5G58830 | 28.356 | 730 | 396 | 27 | 91 | 802 | 53 | 673 | 4.76e-63 | 226 |
MS.gene27961.t1 | AT5G59090 | 29.281 | 765 | 438 | 29 | 91 | 838 | 52 | 730 | 1.01e-62 | 225 |
MS.gene27961.t1 | AT5G59130 | 28.417 | 739 | 428 | 23 | 109 | 834 | 75 | 725 | 1.06e-62 | 225 |
MS.gene27961.t1 | AT5G59190 | 28.714 | 700 | 389 | 23 | 91 | 771 | 15 | 623 | 3.56e-62 | 223 |
MS.gene27961.t1 | AT5G59130 | 28.552 | 739 | 417 | 22 | 109 | 834 | 75 | 715 | 5.29e-62 | 223 |
MS.gene27961.t1 | AT5G59130 | 28.417 | 739 | 424 | 24 | 109 | 834 | 75 | 721 | 2.17e-61 | 221 |
MS.gene27961.t1 | AT5G58820 | 28.630 | 737 | 399 | 25 | 91 | 809 | 49 | 676 | 6.58e-61 | 219 |
MS.gene27961.t1 | AT1G32940 | 32.027 | 587 | 352 | 18 | 89 | 666 | 51 | 599 | 2.53e-59 | 213 |
MS.gene27961.t1 | AT3G46840 | 28.611 | 720 | 414 | 27 | 91 | 792 | 54 | 691 | 2.91e-59 | 216 |
MS.gene27961.t1 | AT5G45640 | 30.000 | 740 | 407 | 30 | 114 | 804 | 38 | 715 | 4.07e-57 | 209 |
MS.gene27961.t1 | AT2G39850 | 27.012 | 733 | 405 | 30 | 83 | 769 | 39 | 687 | 3.18e-52 | 196 |
MS.gene27961.t1 | AT4G15040 | 28.289 | 760 | 439 | 28 | 91 | 834 | 16 | 685 | 6.63e-52 | 193 |
MS.gene27961.t1 | AT4G15040 | 28.289 | 760 | 439 | 28 | 91 | 834 | 16 | 685 | 6.63e-52 | 193 |
MS.gene27961.t1 | AT5G58840 | 30.782 | 588 | 295 | 22 | 91 | 670 | 55 | 538 | 6.66e-52 | 191 |
MS.gene27961.t1 | AT4G00230 | 29.242 | 554 | 332 | 16 | 103 | 652 | 71 | 568 | 1.36e-50 | 188 |
MS.gene27961.t1 | AT1G20160 | 28.216 | 482 | 304 | 15 | 94 | 570 | 55 | 499 | 3.14e-39 | 154 |
MS.gene27961.t1 | AT5G58840 | 34.161 | 322 | 178 | 11 | 91 | 407 | 55 | 347 | 1.87e-36 | 144 |
MS.gene27961.t1 | AT4G21640 | 34.899 | 298 | 174 | 7 | 547 | 840 | 452 | 733 | 3.54e-34 | 140 |
MS.gene27961.t1 | AT4G21640 | 32.143 | 336 | 199 | 11 | 89 | 404 | 63 | 389 | 1.20e-31 | 132 |
MS.gene27961.t1 | AT1G32980 | 38.710 | 186 | 107 | 2 | 615 | 799 | 1 | 180 | 1.02e-31 | 122 |
Find 189 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGATTCAGATGAATTTCT+AGG | 0.215343 | 4.4:+11972397 | MS.gene27961:CDS |
AGCCCCTACTTCTCATTATC+AGG | 0.234397 | 4.4:+11968605 | MS.gene27961:CDS |
TATAGCAACTCACTATTTCT+TGG | 0.243970 | 4.4:+11971199 | MS.gene27961:CDS |
AGTGGCACTGTTGTGTTTCT+TGG | 0.248936 | 4.4:+11968512 | MS.gene27961:CDS |
AAGGCCCTATACAAGGAATT+TGG | 0.253229 | 4.4:+11970430 | MS.gene27961:CDS |
CAGATTCTTGGCTGTTTCTA+AGG | 0.253389 | 4.4:-11971919 | None:intergenic |
GGGGCTGTTGCTAGCATTAA+TGG | 0.266707 | 4.4:+11972214 | MS.gene27961:CDS |
TATGACCGCTGAGCCATTAT+TGG | 0.268058 | 4.4:-11972728 | None:intergenic |
AATGGCAGCAGGACTGAAAT+TGG | 0.269679 | 4.4:-11972657 | None:intergenic |
GTGCAAGCTGCTGGAAATAC+TGG | 0.280493 | 4.4:+11971103 | MS.gene27961:CDS |
AGAAGTGTCCAATGTGGTTT+TGG | 0.289687 | 4.4:+11969338 | MS.gene27961:CDS |
ATATCAGGAGGACGCCTATT+TGG | 0.291937 | 4.4:-11971016 | None:intergenic |
CTTCCAGGAGCGACCAGATT+TGG | 0.294597 | 4.4:-11972343 | None:intergenic |
TTGTTGAAGAAGGTGTTTAA+AGG | 0.302728 | 4.4:+11969112 | MS.gene27961:CDS |
TCGCTCCTGGAAGTTTAATA+TGG | 0.307253 | 4.4:+11972353 | MS.gene27961:CDS |
TTCTAAGGCCTGGTTGATAC+TGG | 0.317537 | 4.4:-11971904 | None:intergenic |
TCGCAGCATTGCTGTTTATA+AGG | 0.326075 | 4.4:+11970411 | MS.gene27961:intron |
CACTTCAGACGCGGTGCTGC+TGG | 0.326240 | 4.4:+11968651 | MS.gene27961:CDS |
CCCATGAATCCTTCTGTGAA+TGG | 0.333797 | 4.4:+11971963 | MS.gene27961:CDS |
GACAACAATGCCATGTCTAT+TGG | 0.335196 | 4.4:-11971055 | None:intergenic |
TCCTCCAAATTCCTTGTATA+GGG | 0.337902 | 4.4:-11970434 | None:intergenic |
ACCAGCAGCACTCAGATTCT+TGG | 0.338107 | 4.4:-11971931 | None:intergenic |
GGAATTCCAGTGGTTGTTGC+TGG | 0.346510 | 4.4:+11969822 | MS.gene27961:CDS |
TCAGCAAAACTAGGGTGTTT+AGG | 0.346643 | 4.4:-11969495 | None:intergenic |
GGAAGACTGTCCTCTGGATC+TGG | 0.353324 | 4.4:-11972298 | None:intergenic |
TGTTGAAGAAGGTGTTTAAA+GGG | 0.353475 | 4.4:+11969113 | MS.gene27961:CDS |
CCCATGTCAAAGGGAGTTGC+TGG | 0.353683 | 4.4:-11972776 | None:intergenic |
GTGGCACTGTTGTGTTTCTT+GGG | 0.359632 | 4.4:+11968513 | MS.gene27961:CDS |
GTCCTCTGGATCTGGGCCTC+TGG | 0.364474 | 4.4:-11972290 | None:intergenic |
CGTGCAATAGGAAGCTTGTT+GGG | 0.364774 | 4.4:+11969598 | MS.gene27961:CDS |
ATCCTCCAAATTCCTTGTAT+AGG | 0.364835 | 4.4:-11970435 | None:intergenic |
CAAAGGGAGTTGCTGGAGAT+TGG | 0.364867 | 4.4:-11972769 | None:intergenic |
TGCAAATGAAATTATTATGC+TGG | 0.366485 | 4.4:-11972018 | None:intergenic |
TTGAAGAAAGTTGCAATATC+AGG | 0.369864 | 4.4:-11971031 | None:intergenic |
CTGCCAGCTTTGGAAGGATT+GGG | 0.378864 | 4.4:+11973308 | MS.gene27961:CDS |
GCTTGTCAATCACTCCAAAT+AGG | 0.380391 | 4.4:+11971002 | MS.gene27961:CDS |
TTGTATAGCTACACATTAAG+AGG | 0.384107 | 4.4:-11971860 | None:intergenic |
GCTGGCAGTTGAGCTGTTGC+TGG | 0.387080 | 4.4:-11973293 | None:intergenic |
AATTTGTACATTGTGTTCTC+AGG | 0.391410 | 4.4:-11971729 | None:intergenic |
GACAGTGCTTCTCCCTTTGA+TGG | 0.392462 | 4.4:+11969675 | MS.gene27961:CDS |
TTCCATCTGGTTCGTGCAAT+AGG | 0.393130 | 4.4:+11969586 | MS.gene27961:CDS |
TTACCTTGGTTTGTGAAGTC+TGG | 0.394743 | 4.4:-11968679 | None:intergenic |
GTTGTTGCTGGGCATCATTT+TGG | 0.396448 | 4.4:+11969834 | MS.gene27961:CDS |
CTAAAGGATGACATGCTCAT+AGG | 0.396865 | 4.4:-11971133 | None:intergenic |
GCAGCCCATATTAAACTTCC+AGG | 0.399428 | 4.4:-11972358 | None:intergenic |
ATGGCTGCACCTCATGTTGC+TGG | 0.403990 | 4.4:+11972605 | MS.gene27961:CDS |
AAACCAAATCTGGTCGCTCC+TGG | 0.405433 | 4.4:+11972340 | MS.gene27961:CDS |
TTTGGAAGGATTGGGTTGTT+TGG | 0.405933 | 4.4:+11973316 | MS.gene27961:CDS |
CACATATTGGGTACATTTAG+TGG | 0.408971 | 4.4:+11968494 | MS.gene27961:CDS |
ACTGCCAGCTTTGGAAGGAT+TGG | 0.412006 | 4.4:+11973307 | MS.gene27961:CDS |
GGAAATAATGCGACTATACT+TGG | 0.413840 | 4.4:+11971220 | MS.gene27961:CDS |
AACAGCTCAACTGCCAGCTT+TGG | 0.414248 | 4.4:+11973298 | MS.gene27961:CDS |
TTCTCTGAACTACTCTAGAT+TGG | 0.417339 | 4.4:-11973132 | None:intergenic |
AAGTAAGTTCAATAAAGATT+TGG | 0.418898 | 4.4:+11971827 | MS.gene27961:CDS |
AATTTCAGTCCTGCTGCCAT+TGG | 0.419045 | 4.4:+11972659 | MS.gene27961:CDS |
ACCATTCACAGAAGGATTCA+TGG | 0.420328 | 4.4:-11971964 | None:intergenic |
TCTTGGCTGTTTCTAAGGCC+TGG | 0.421213 | 4.4:-11971914 | None:intergenic |
AAATGAGGAAGAGCACATAT+TGG | 0.422286 | 4.4:+11968481 | None:intergenic |
CAACCTTGCTATTGTGATTG+AGG | 0.424024 | 4.4:-11973107 | None:intergenic |
CAACAGTGGGAAGCCAATAA+TGG | 0.427981 | 4.4:+11972715 | MS.gene27961:CDS |
TAGGTCTTCCACAGGGAGCT+TGG | 0.428639 | 4.4:+11969403 | MS.gene27961:CDS |
CAGGGAGCTTGGTTTCAATC+AGG | 0.434082 | 4.4:+11969414 | MS.gene27961:CDS |
CAAGGAATTTGGAGGATTTG+CGG | 0.434744 | 4.4:+11970441 | MS.gene27961:CDS |
AACCTTGCTATTGTGATTGA+GGG | 0.435143 | 4.4:-11973106 | None:intergenic |
GCTTCTCCCTTTGATGGTGA+TGG | 0.444913 | 4.4:+11969681 | MS.gene27961:CDS |
CGCTCCTGGAAGTTTAATAT+GGG | 0.445698 | 4.4:+11972354 | MS.gene27961:CDS |
TCATGATTCTTTGTTGAAGA+AGG | 0.446092 | 4.4:+11969102 | MS.gene27961:CDS |
GATTTATCATCAGCAAAACT+AGG | 0.446508 | 4.4:-11969504 | None:intergenic |
ATTGGGTTGTTTGGTAATCA+AGG | 0.449106 | 4.4:+11973325 | MS.gene27961:CDS |
AGCTATCATTACTTGATCAA+TGG | 0.453190 | 4.4:+11969157 | MS.gene27961:CDS |
AGTCCATGGATCTTTACAAT+TGG | 0.454179 | 4.4:+11971154 | MS.gene27961:CDS |
TAAAGGATGACATGCTCATA+GGG | 0.454776 | 4.4:-11971132 | None:intergenic |
GCAAATGAAATTATTATGCT+GGG | 0.458478 | 4.4:-11972017 | None:intergenic |
GCTGGAGATTGGTTTAGCTC+TGG | 0.458495 | 4.4:-11972758 | None:intergenic |
TTCAATAAAGATTTGGTCCA+GGG | 0.458870 | 4.4:+11971834 | MS.gene27961:CDS |
CACGAACCAGATGGAAAATC+CGG | 0.467789 | 4.4:-11969579 | None:intergenic |
TGTAAAGATCCATGGACTAA+AGG | 0.470963 | 4.4:-11971149 | None:intergenic |
GAAGACTGTCCTCTGGATCT+GGG | 0.474959 | 4.4:-11972297 | None:intergenic |
TCGTGCAATAGGAAGCTTGT+TGG | 0.479155 | 4.4:+11969597 | MS.gene27961:CDS |
AACATAGCTTCTATTGCAGC+TGG | 0.480788 | 4.4:+11969792 | MS.gene27961:CDS |
ATGAAACTTATAGTGTTGGT+TGG | 0.482569 | 4.4:+11973176 | MS.gene27961:CDS |
TTGGTTGGAGTTCTCCATAC+GGG | 0.483137 | 4.4:+11973191 | MS.gene27961:CDS |
AATGAGGAAGAGCACATATT+GGG | 0.483953 | 4.4:+11968482 | None:intergenic |
GCCAAGAATCTGAGTGCTGC+TGG | 0.485011 | 4.4:+11971930 | MS.gene27961:CDS |
TTCATTTGCAAATGATTCCA+AGG | 0.486030 | 4.4:+11972031 | MS.gene27961:CDS |
GAAGTTTAATATGGGCTGCT+TGG | 0.488618 | 4.4:+11972362 | MS.gene27961:CDS |
CCCTTTGATGGTGATGGACA+TGG | 0.488921 | 4.4:+11969687 | MS.gene27961:CDS |
AGTTGAGTCAAACATTCCTC+TGG | 0.491555 | 4.4:-11969649 | None:intergenic |
TCCATGTCCATCACCATCAA+AGG | 0.491778 | 4.4:-11969688 | None:intergenic |
GTTCAATAAAGATTTGGTCC+AGG | 0.492716 | 4.4:+11971833 | MS.gene27961:CDS |
ACTCCCTTTGACATGGGGAG+TGG | 0.495132 | 4.4:+11972782 | MS.gene27961:CDS |
ATGGCAGCAGGACTGAAATT+GGG | 0.499760 | 4.4:-11972656 | None:intergenic |
TGTTTATAAGGCCCTATACA+AGG | 0.502313 | 4.4:+11970423 | MS.gene27961:CDS |
GCTACTGCAGCATTAAATCC+AGG | 0.504364 | 4.4:+11972815 | MS.gene27961:CDS |
TCACCCTGATAATGAGAAGT+AGG | 0.504516 | 4.4:-11968609 | None:intergenic |
CACCCTGATAATGAGAAGTA+GGG | 0.505028 | 4.4:-11968608 | None:intergenic |
AACCGAGCAGGAGCATTGAA+TGG | 0.507543 | 4.4:-11969534 | None:intergenic |
TAAAGGCAGATAAGCTATCA+AGG | 0.508072 | 4.4:+11969310 | MS.gene27961:intron |
CCAGCAACTCCCTTTGACAT+GGG | 0.510708 | 4.4:+11972776 | MS.gene27961:CDS |
TCATGAGGAAGACTGTCCTC+TGG | 0.512742 | 4.4:-11972304 | None:intergenic |
ACTTCAGACGCGGTGCTGCT+GGG | 0.513307 | 4.4:+11968652 | MS.gene27961:CDS |
TCAGGTGGGTTTGAAACTGC+TGG | 0.514003 | 4.4:+11969432 | MS.gene27961:CDS |
TGATGCCCAGCAACAACCAC+TGG | 0.515226 | 4.4:-11969828 | None:intergenic |
CAACCCAATCCTTCCAAAGC+TGG | 0.516651 | 4.4:-11973311 | None:intergenic |
ATCCATTCAATGCTCCTGCT+CGG | 0.518019 | 4.4:+11969532 | MS.gene27961:CDS |
GAATTCCAGTGGTTGTTGCT+GGG | 0.519715 | 4.4:+11969823 | MS.gene27961:CDS |
AATGCGACTATACTTGGAGT+TGG | 0.522007 | 4.4:+11971226 | MS.gene27961:CDS |
GGAGCTTGGTTTCAATCAGG+TGG | 0.522948 | 4.4:+11969417 | MS.gene27961:CDS |
GAGCTTGGTTTCAATCAGGT+GGG | 0.523851 | 4.4:+11969418 | MS.gene27961:CDS |
TAAGACTTGTCTCTCTCCAT+TGG | 0.526010 | 4.4:-11973251 | None:intergenic |
ACTATTGCATTTGTTGACAC+TGG | 0.529057 | 4.4:+11969465 | MS.gene27961:CDS |
CAGCAGCACCGCGTCTGAAG+TGG | 0.531157 | 4.4:-11968650 | None:intergenic |
AAACCACTCCCCATGTCAAA+GGG | 0.536442 | 4.4:-11972785 | None:intergenic |
AGCGCAGATCCAATGGCAGC+AGG | 0.536844 | 4.4:-11972668 | None:intergenic |
TCCAGCAACTCCCTTTGACA+TGG | 0.541263 | 4.4:+11972775 | MS.gene27961:CDS |
TTGTTGTCAGCTACAAAAGC+TGG | 0.541505 | 4.4:+11971070 | MS.gene27961:CDS |
GTTGAAGAAGGTGTTTAAAG+GGG | 0.543043 | 4.4:+11969114 | MS.gene27961:CDS |
AAAACCACTCCCCATGTCAA+AGG | 0.544182 | 4.4:-11972786 | None:intergenic |
GCTCAACTGCCAGCTTTGGA+AGG | 0.544458 | 4.4:+11973302 | MS.gene27961:CDS |
CCATTCACAGAAGGATTCAT+GGG | 0.547582 | 4.4:-11971963 | None:intergenic |
GCCCTATACAAGGAATTTGG+AGG | 0.549042 | 4.4:+11970433 | MS.gene27961:CDS |
ACTCGCTTCTCTCTTGCCAA+TGG | 0.552492 | 4.4:+11973235 | MS.gene27961:CDS |
GCATGTCATCCTTTAGTCCA+TGG | 0.552896 | 4.4:+11971140 | MS.gene27961:CDS |
CAACAACCACTGGAATTCCA+TGG | 0.553184 | 4.4:-11969818 | None:intergenic |
GCACCAATTGTAAAGATCCA+TGG | 0.556135 | 4.4:-11971157 | None:intergenic |
GGGTTTGAAACTGCTGGAGA+AGG | 0.556235 | 4.4:+11969438 | MS.gene27961:CDS |
TGTGCTTGTTAACCAACAGC+AGG | 0.556568 | 4.4:+11969186 | MS.gene27961:CDS |
TCTATTGCAGCTGGAAACCA+TGG | 0.556776 | 4.4:+11969801 | MS.gene27961:CDS |
CCATGTCCATCACCATCAAA+GGG | 0.556925 | 4.4:-11969687 | None:intergenic |
TGGCACCTGTGAGGTTACTC+CGG | 0.558000 | 4.4:+11969560 | MS.gene27961:CDS |
TAGAAATTCATCTGAATCAG+TGG | 0.558632 | 4.4:-11972395 | None:intergenic |
TGCAAGCTGCTGGAAATACT+GGG | 0.559931 | 4.4:+11971104 | MS.gene27961:CDS |
GAAAATGAAACTTATAGTGT+TGG | 0.560647 | 4.4:+11973172 | MS.gene27961:CDS |
AGCTGAAAACCATTCACAGA+AGG | 0.560950 | 4.4:-11971972 | None:intergenic |
GGTGGAAAGCGCAGATCCAA+TGG | 0.562075 | 4.4:-11972675 | None:intergenic |
AGATTGGTTTAGCTCTGGTG+AGG | 0.564989 | 4.4:-11972753 | None:intergenic |
CAGAGTAATACATAACACTT+GGG | 0.565572 | 4.4:-11972267 | None:intergenic |
GTTGGTTGGAGTTCTCCATA+CGG | 0.568006 | 4.4:+11973190 | MS.gene27961:CDS |
GTGCAATAGGAAGCTTGTTG+GGG | 0.568461 | 4.4:+11969599 | MS.gene27961:CDS |
TGGCACTGTTGTGTTTCTTG+GGG | 0.569653 | 4.4:+11968514 | MS.gene27961:CDS |
TTGGCAAGAGAGAAGCGAGT+TGG | 0.570384 | 4.4:-11973232 | None:intergenic |
TTCAAAATGTCAGCTTCATG+AGG | 0.570451 | 4.4:-11972319 | None:intergenic |
TATACAATGAGATTTGTGCT+TGG | 0.571299 | 4.4:+11971876 | MS.gene27961:CDS |
GCAGAGTAATACATAACACT+TGG | 0.590858 | 4.4:-11972268 | None:intergenic |
CGTCTCTGTATGACAACAGT+GGG | 0.595002 | 4.4:+11972702 | MS.gene27961:CDS |
ATTGCTGATGATATGTATGT+TGG | 0.601383 | 4.4:+11971789 | MS.gene27961:CDS |
TGCCAGAGGCCCAGATCCAG+AGG | 0.601511 | 4.4:+11972288 | MS.gene27961:CDS |
ATTTATCATCAGCAAAACTA+GGG | 0.601954 | 4.4:-11969503 | None:intergenic |
CAGGTGCCACAAAACCGAGC+AGG | 0.604094 | 4.4:-11969546 | None:intergenic |
GATTGGTTTAGCTCTGGTGA+GGG | 0.606060 | 4.4:-11972752 | None:intergenic |
GCCCCTACTTCTCATTATCA+GGG | 0.607839 | 4.4:+11968606 | MS.gene27961:CDS |
CTACTGCAGCATTAAATCCA+GGG | 0.610741 | 4.4:+11972816 | MS.gene27961:CDS |
GCTATAAACTCGATCGTGAG+AGG | 0.611721 | 4.4:-11971182 | None:intergenic |
ACATCATACAAACCTGCTGT+TGG | 0.612010 | 4.4:-11969198 | None:intergenic |
CAGCAACTCCCTTTGACATG+GGG | 0.612900 | 4.4:+11972777 | MS.gene27961:CDS |
TGGTCTCTCCAGTATCAACC+AGG | 0.613616 | 4.4:+11971896 | MS.gene27961:CDS |
GATGACATGCTCATAGGGGA+AGG | 0.614063 | 4.4:-11971127 | None:intergenic |
TTCTACAGTTCTAGACTACA+CGG | 0.621861 | 4.4:+11973030 | MS.gene27961:CDS |
TTCCTATTGCACGAACCAGA+TGG | 0.622350 | 4.4:-11969588 | None:intergenic |
TACACATTAAGAGGTTCCCC+TGG | 0.622570 | 4.4:-11971851 | None:intergenic |
GTTTATAACCACTTCAGACG+CGG | 0.625790 | 4.4:+11968642 | MS.gene27961:CDS |
TGGTTGGAGTTCTCCATACG+GGG | 0.626876 | 4.4:+11973192 | MS.gene27961:CDS |
GCAGCATCTGCTATAACCAG+AGG | 0.630755 | 4.4:+11969633 | MS.gene27961:CDS |
TGCCCTCAATCACAATAGCA+AGG | 0.635273 | 4.4:+11973104 | MS.gene27961:CDS |
AAGAAAGTTGCAATATCAGG+AGG | 0.644006 | 4.4:-11971028 | None:intergenic |
GAACCAGACTTCACAAACCA+AGG | 0.646301 | 4.4:+11968676 | MS.gene27961:CDS |
TGTTGTTGCAGCTATTGACC+AGG | 0.648187 | 4.4:+11970468 | MS.gene27961:CDS |
TCAATAAAGATTTGGTCCAG+GGG | 0.650419 | 4.4:+11971835 | MS.gene27961:CDS |
GCTGTTGCTAGCATTAATGG+TGG | 0.651040 | 4.4:+11972217 | MS.gene27961:CDS |
TTTCTTCAATCCAATAGACA+TGG | 0.653465 | 4.4:+11971045 | MS.gene27961:CDS |
ACCCTGATAATGAGAAGTAG+GGG | 0.656098 | 4.4:-11968607 | None:intergenic |
ATAAACTCGATCGTGAGAGG+TGG | 0.657029 | 4.4:-11971179 | None:intergenic |
AAAATCCGGAGTAACCTCAC+AGG | 0.663811 | 4.4:-11969565 | None:intergenic |
GCAGCAAGACCAGCAACATG+AGG | 0.671302 | 4.4:-11972614 | None:intergenic |
ACAAAGACAGATAAGAGACA+TGG | 0.674123 | 4.4:+11969061 | MS.gene27961:CDS |
TGGAAACCATGGAATTCCAG+TGG | 0.674811 | 4.4:+11969812 | MS.gene27961:CDS |
GTCATACAGAGACGCTGTGG+TGG | 0.681598 | 4.4:-11972693 | None:intergenic |
AATGATGTCTGGGACAAGCA+TGG | 0.682058 | 4.4:+11972586 | MS.gene27961:CDS |
GATTGAAACCAAGCTCCCTG+TGG | 0.682784 | 4.4:-11969411 | None:intergenic |
AAAGGATGACATGCTCATAG+GGG | 0.689113 | 4.4:-11971131 | None:intergenic |
GTTATGTATTACTCTGCCAG+AGG | 0.695396 | 4.4:+11972274 | MS.gene27961:CDS |
GCGTCTCTGTATGACAACAG+TGG | 0.697535 | 4.4:+11972701 | MS.gene27961:CDS |
ATAAATAGTTACTGTGAACG+AGG | 0.708219 | 4.4:-11969876 | None:intergenic |
TCTACAGTTCTAGACTACAC+GGG | 0.708731 | 4.4:+11973031 | MS.gene27961:CDS |
GAGAAGAGAAGTGTCCAATG+TGG | 0.724946 | 4.4:+11969332 | MS.gene27961:CDS |
AGGAATGTTTGACTCAACTG+AGG | 0.725112 | 4.4:+11969653 | MS.gene27961:CDS |
AGAGTAATACATAACACTTG+GGG | 0.735362 | 4.4:-11972266 | None:intergenic |
GGAAGCCAATAATGGCTCAG+CGG | 0.740103 | 4.4:+11972723 | MS.gene27961:CDS |
GTTGTCATACAGAGACGCTG+TGG | 0.770578 | 4.4:-11972696 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTAAATTTCATTTTTTTTT+AGG | + | chr4.4:11972962-11972981 | MS.gene27961:intron | 10.0% |
!!! | TTTAAAATCTAAATAATTCA+TGG | + | chr4.4:11968913-11968932 | MS.gene27961:intron | 10.0% |
!! | AAAGAACAAATTTCAAAAAT+TGG | - | chr4.4:11971687-11971706 | None:intergenic | 15.0% |
!! | AAGAAATTCAAGATTTAAAA+TGG | + | chr4.4:11971511-11971530 | MS.gene27961:intron | 15.0% |
!! | ATAAAAACCAATATGAAAAA+TGG | - | chr4.4:11972065-11972084 | None:intergenic | 15.0% |
!! | CATTATATTTATAATGTCTA+TGG | + | chr4.4:11972881-11972900 | MS.gene27961:intron | 15.0% |
!! | TTAACAGAATTATAAAATTG+TGG | - | chr4.4:11970920-11970939 | None:intergenic | 15.0% |
!!! | AAGAATCTGTTTATTTTTAT+TGG | + | chr4.4:11970678-11970697 | MS.gene27961:intron | 15.0% |
!!! | AATTAGTAAATAGATTTTGA+AGG | - | chr4.4:11970893-11970912 | None:intergenic | 15.0% |
!!! | AATTTTGAAATCACTTATAA+AGG | + | chr4.4:11969293-11969312 | MS.gene27961:intron | 15.0% |
!!! | ACAATTTTATAATTCTGTTA+AGG | + | chr4.4:11970919-11970938 | MS.gene27961:intron | 15.0% |
!!! | AGAATCTGTTTATTTTTATT+GGG | + | chr4.4:11970679-11970698 | MS.gene27961:intron | 15.0% |
!!! | ATTAGTAAATAGATTTTGAA+GGG | - | chr4.4:11970892-11970911 | None:intergenic | 15.0% |
!!! | TAAACAAACTTTTACTATAT+AGG | + | chr4.4:11972432-11972451 | MS.gene27961:intron | 15.0% |
!!! | TAAAGTTCTAACATTTTAAA+CGG | - | chr4.4:11970056-11970075 | None:intergenic | 15.0% |
!! | AAAAAAATTGTGTCAACAAT+TGG | - | chr4.4:11970573-11970592 | None:intergenic | 20.0% |
!! | AAAAATACACAAACATATTC+AGG | - | chr4.4:11971421-11971440 | None:intergenic | 20.0% |
!! | AAAAGAAGATAAAATACAAC+AGG | - | chr4.4:11970781-11970800 | None:intergenic | 20.0% |
!! | AAGTAAGTTCAATAAAGATT+TGG | + | chr4.4:11971827-11971846 | MS.gene27961:CDS | 20.0% |
!! | AATTTGGAAAAATGAATGTT+TGG | + | chr4.4:11969015-11969034 | MS.gene27961:intron | 20.0% |
!! | AGAAAAAATTGTTAAACTTG+GGG | + | chr4.4:11972195-11972214 | MS.gene27961:CDS | 20.0% |
!! | ATAAACAGATTCTTCAAAAA+TGG | - | chr4.4:11970672-11970691 | None:intergenic | 20.0% |
!! | ATTTAATGGTCATAAATTTG+AGG | + | chr4.4:11970139-11970158 | MS.gene27961:intron | 20.0% |
!! | CAGAAAAAATTGTTAAACTT+GGG | + | chr4.4:11972194-11972213 | MS.gene27961:CDS | 20.0% |
!! | GATAGAAAATTATAGAATCT+GGG | + | chr4.4:11970246-11970265 | MS.gene27961:intron | 20.0% |
!! | TATTATTGCATTTCCTTATT+TGG | + | chr4.4:11968766-11968785 | MS.gene27961:intron | 20.0% |
!! | TATTTCAGAAATTTCAACAA+CGG | + | chr4.4:11972913-11972932 | MS.gene27961:intron | 20.0% |
!! | TCAGAAAAAATTGTTAAACT+TGG | + | chr4.4:11972193-11972212 | MS.gene27961:CDS | 20.0% |
!! | TGATAGAAAATTATAGAATC+TGG | + | chr4.4:11970245-11970264 | MS.gene27961:intron | 20.0% |
!! | TGTTACCTTAACAAATTATT+TGG | + | chr4.4:11970203-11970222 | MS.gene27961:intron | 20.0% |
!! | TTAGAACTTTAGATATTTGT+TGG | + | chr4.4:11970065-11970084 | MS.gene27961:intron | 20.0% |
!! | TTTATTCAAGAAAAAGAAGA+AGG | + | chr4.4:11970274-11970293 | MS.gene27961:intron | 20.0% |
!!! | AAAAGTACTTGAATTAGTAA+AGG | + | chr4.4:11969985-11970004 | MS.gene27961:intron | 20.0% |
!!! | ATACAACATTTCTTTTTTAC+AGG | - | chr4.4:11970300-11970319 | None:intergenic | 20.0% |
!!! | ATTTTCTATCATCTTTCAAA+TGG | - | chr4.4:11970236-11970255 | None:intergenic | 20.0% |
!!! | TATACTATTTATACCAGTTT+TGG | + | chr4.4:11971539-11971558 | MS.gene27961:intron | 20.0% |
!!! | TGATTAACTTGATTTTTTAC+AGG | + | chr4.4:11970952-11970971 | MS.gene27961:intron | 20.0% |
!!! | TGTTTAAATTTTAACTCTAC+TGG | + | chr4.4:11973061-11973080 | MS.gene27961:CDS | 20.0% |
! | AAACCAATATGAAAAATGGA+TGG | - | chr4.4:11972061-11972080 | None:intergenic | 25.0% |
! | AAGATAAAATACAACAGGAT+TGG | - | chr4.4:11970776-11970795 | None:intergenic | 25.0% |
! | AATTCTTCACTTGAAAAAGA+CGG | + | chr4.4:11972166-11972185 | MS.gene27961:CDS | 25.0% |
! | AATTTCTTGTTCCAGTTTAA+GGG | - | chr4.4:11971499-11971518 | None:intergenic | 25.0% |
! | AGGAAATTATCAATACTGAA+CGG | - | chr4.4:11970859-11970878 | None:intergenic | 25.0% |
! | ATCACATTAACACATACTTA+AGG | - | chr4.4:11970628-11970647 | None:intergenic | 25.0% |
! | ATTTATCATCAGCAAAACTA+GGG | - | chr4.4:11969506-11969525 | None:intergenic | 25.0% |
! | GAAAATGAAACTTATAGTGT+TGG | + | chr4.4:11973172-11973191 | MS.gene27961:CDS | 25.0% |
! | GATTGACACAAATAAAAGAA+TGG | - | chr4.4:11969737-11969756 | None:intergenic | 25.0% |
! | GCAAATGAAATTATTATGCT+GGG | - | chr4.4:11972020-11972039 | None:intergenic | 25.0% |
! | TATGTGTTAATGTGATTTCA+TGG | + | chr4.4:11970632-11970651 | MS.gene27961:intron | 25.0% |
! | TATTAAGATGATGTTGTTCT+AGG | - | chr4.4:11971568-11971587 | None:intergenic | 25.0% |
! | TGCAAATGAAATTATTATGC+TGG | - | chr4.4:11972021-11972040 | None:intergenic | 25.0% |
! | TTATTACAGATACATCAGAA+TGG | - | chr4.4:11969767-11969786 | None:intergenic | 25.0% |
! | TTCAAAACAAAGATAGTGAA+AGG | - | chr4.4:11968711-11968730 | None:intergenic | 25.0% |
! | TTGACTTTGTGAGTTTAATT+TGG | + | chr4.4:11968999-11969018 | MS.gene27961:intron | 25.0% |
!! | AAAATTTTGCAATGATGTCT+GGG | + | chr4.4:11972576-11972595 | MS.gene27961:CDS | 25.0% |
!! | AACATAATACTCAACTCTTT+TGG | - | chr4.4:11971322-11971341 | None:intergenic | 25.0% |
!! | CTTTTTGTAATCTGTTTATG+GGG | + | chr4.4:11969930-11969949 | MS.gene27961:intron | 25.0% |
!! | GCTTTTTGTAATCTGTTTAT+GGG | + | chr4.4:11969929-11969948 | MS.gene27961:intron | 25.0% |
!!! | AAATTCTGTTTCTATAATCC+TGG | + | chr4.4:11971260-11971279 | MS.gene27961:intron | 25.0% |
!!! | AATATGTCAGTGCTATTTAA+TGG | + | chr4.4:11970125-11970144 | MS.gene27961:intron | 25.0% |
!!! | AATTTTAACTCTACTGGATA+TGG | + | chr4.4:11973067-11973086 | MS.gene27961:CDS | 25.0% |
!!! | ATAGGCCAAATAATTTGTTA+AGG | - | chr4.4:11970211-11970230 | None:intergenic | 25.0% |
!!! | TCATTTTAACAAATACTTGC+CGG | - | chr4.4:11968876-11968895 | None:intergenic | 25.0% |
!!! | TGCTTTTTGTAATCTGTTTA+TGG | + | chr4.4:11969928-11969947 | MS.gene27961:intron | 25.0% |
!!! | TTTCACTATCTTTGTTTTGA+AGG | + | chr4.4:11968710-11968729 | MS.gene27961:intron | 25.0% |
!!! | TTTTGATTTGTGTTTTATCG+AGG | + | chr4.4:11970800-11970819 | MS.gene27961:intron | 25.0% |
AAGTTATATCTGTGCTATGA+TGG | + | chr4.4:11968847-11968866 | MS.gene27961:intron | 30.0% | |
AATTTGTACATTGTGTTCTC+AGG | - | chr4.4:11971732-11971751 | None:intergenic | 30.0% | |
ACTCACAAAGTCAAGAAATT+AGG | - | chr4.4:11968993-11969012 | None:intergenic | 30.0% | |
AGAAAAATCCAAAACCACAT+TGG | - | chr4.4:11969349-11969368 | None:intergenic | 30.0% | |
AGAGTAATACATAACACTTG+GGG | - | chr4.4:11972269-11972288 | None:intergenic | 30.0% | |
AGCTATCATTACTTGATCAA+TGG | + | chr4.4:11969157-11969176 | MS.gene27961:CDS | 30.0% | |
ATAAATAGTTACTGTGAACG+AGG | - | chr4.4:11969879-11969898 | None:intergenic | 30.0% | |
ATCATCTTTCAAATGGCAAT+AGG | - | chr4.4:11970229-11970248 | None:intergenic | 30.0% | |
ATGTATTGCTGACACATAAA+TGG | - | chr4.4:11970533-11970552 | None:intergenic | 30.0% | |
ATTGCTGATGATATGTATGT+TGG | + | chr4.4:11971789-11971808 | MS.gene27961:CDS | 30.0% | |
CAGAGTAATACATAACACTT+GGG | - | chr4.4:11972270-11972289 | None:intergenic | 30.0% | |
CATTAACACATACTTAAGGA+AGG | - | chr4.4:11970624-11970643 | None:intergenic | 30.0% | |
CTGATGTATCTGTAATAAAC+AGG | + | chr4.4:11969769-11969788 | MS.gene27961:intron | 30.0% | |
GAATTTCTTGTTCCAGTTTA+AGG | - | chr4.4:11971500-11971519 | None:intergenic | 30.0% | |
GATTTATCATCAGCAAAACT+AGG | - | chr4.4:11969507-11969526 | None:intergenic | 30.0% | |
GTTCTTCTTGATTGAAGTTT+AGG | + | chr4.4:11968814-11968833 | MS.gene27961:intron | 30.0% | |
TAGAAATTCATCTGAATCAG+TGG | - | chr4.4:11972398-11972417 | None:intergenic | 30.0% | |
TATACAATGAGATTTGTGCT+TGG | + | chr4.4:11971876-11971895 | MS.gene27961:CDS | 30.0% | |
TCATGATTCTTTGTTGAAGA+AGG | + | chr4.4:11969102-11969121 | MS.gene27961:CDS | 30.0% | |
TCTTCAAAAATGGATCAAAC+AGG | - | chr4.4:11970662-11970681 | None:intergenic | 30.0% | |
TTAACTCATTTCATCATCCA+TGG | - | chr4.4:11971605-11971624 | None:intergenic | 30.0% | |
TTCATTTGCAAATGATTCCA+AGG | + | chr4.4:11972031-11972050 | MS.gene27961:CDS | 30.0% | |
TTGAAGAAAGTTGCAATATC+AGG | - | chr4.4:11971034-11971053 | None:intergenic | 30.0% | |
TTGTATAGCTACACATTAAG+AGG | - | chr4.4:11971863-11971882 | None:intergenic | 30.0% | |
TTTCTTCAATCCAATAGACA+TGG | + | chr4.4:11971045-11971064 | MS.gene27961:CDS | 30.0% | |
! | ACTGATTCAGATGAATTTCT+AGG | + | chr4.4:11972397-11972416 | MS.gene27961:CDS | 30.0% |
! | ATTATGCTGGGAATTTTCAT+TGG | - | chr4.4:11972008-11972027 | None:intergenic | 30.0% |
! | ATTGCAAAATTTTCACCTGT+TGG | - | chr4.4:11972569-11972588 | None:intergenic | 30.0% |
! | ATTTGTTGGTACTTAGTACT+TGG | + | chr4.4:11970079-11970098 | MS.gene27961:intron | 30.0% |
! | GAAAATTTTGCAATGATGTC+TGG | + | chr4.4:11972575-11972594 | MS.gene27961:CDS | 30.0% |
! | GATCTATATTTTCAACCAAC+AGG | + | chr4.4:11972551-11972570 | MS.gene27961:intron | 30.0% |
! | GATTACATGTCTTTTCTATG+TGG | + | chr4.4:11972992-11973011 | MS.gene27961:CDS | 30.0% |
! | TATAGCAACTCACTATTTCT+TGG | + | chr4.4:11971199-11971218 | MS.gene27961:CDS | 30.0% |
! | TATTGCATTTCCTTATTTGG+CGG | + | chr4.4:11968769-11968788 | MS.gene27961:intron | 30.0% |
! | TCTTTTCTATGTGGTATCAA+TGG | + | chr4.4:11973001-11973020 | MS.gene27961:CDS | 30.0% |
! | TTCAATAAAGATTTGGTCCA+GGG | + | chr4.4:11971834-11971853 | MS.gene27961:CDS | 30.0% |
!! | AGATTTTGAAGGGATCATAT+GGG | - | chr4.4:11970882-11970901 | None:intergenic | 30.0% |
!! | AGCACTGACATATTAATTCT+TGG | - | chr4.4:11970119-11970138 | None:intergenic | 30.0% |
!! | ATGAAACTTATAGTGTTGGT+TGG | + | chr4.4:11973176-11973195 | MS.gene27961:CDS | 30.0% |
!! | TAGATTTTGAAGGGATCATA+TGG | - | chr4.4:11970883-11970902 | None:intergenic | 30.0% |
!! | TGTTGAAGAAGGTGTTTAAA+GGG | + | chr4.4:11969113-11969132 | MS.gene27961:CDS | 30.0% |
!! | TTGTTGAAGAAGGTGTTTAA+AGG | + | chr4.4:11969112-11969131 | MS.gene27961:CDS | 30.0% |
!!! | TATGCAATGTTGTTTTCAAC+TGG | + | chr4.4:11972121-11972140 | MS.gene27961:intron | 30.0% |
!!! | TGACATTTTGAAACCAAATC+TGG | + | chr4.4:11972330-11972349 | MS.gene27961:CDS | 30.0% |
AAATACTGTTGACACTTGAC+AGG | - | chr4.4:11970184-11970203 | None:intergenic | 35.0% | |
AAGAAAGTTGCAATATCAGG+AGG | - | chr4.4:11971031-11971050 | None:intergenic | 35.0% | |
AATGCTGCGAAAGATTGAAA+CGG | - | chr4.4:11970401-11970420 | None:intergenic | 35.0% | |
ACAAAGACAGATAAGAGACA+TGG | + | chr4.4:11969061-11969080 | MS.gene27961:CDS | 35.0% | |
AGTCCATGGATCTTTACAAT+TGG | + | chr4.4:11971154-11971173 | MS.gene27961:CDS | 35.0% | |
ATCCTCCAAATTCCTTGTAT+AGG | - | chr4.4:11970438-11970457 | None:intergenic | 35.0% | |
CAACGAGAGAAATTCAAAGA+AGG | - | chr4.4:11971359-11971378 | None:intergenic | 35.0% | |
CACATATTGGGTACATTTAG+TGG | + | chr4.4:11968494-11968513 | MS.gene27961:CDS | 35.0% | |
GCAGAGTAATACATAACACT+TGG | - | chr4.4:11972271-11972290 | None:intergenic | 35.0% | |
GGAAATAATGCGACTATACT+TGG | + | chr4.4:11971220-11971239 | MS.gene27961:CDS | 35.0% | |
TAAAGGATGACATGCTCATA+GGG | - | chr4.4:11971135-11971154 | None:intergenic | 35.0% | |
TAAAGGCAGATAAGCTATCA+AGG | + | chr4.4:11969310-11969329 | MS.gene27961:intron | 35.0% | |
TAACACATACTTAAGGAAGG+AGG | - | chr4.4:11970621-11970640 | None:intergenic | 35.0% | |
TCATTTCATGCAAGCATGAT+TGG | + | chr4.4:11970342-11970361 | MS.gene27961:intron | 35.0% | |
TCCTCCAAATTCCTTGTATA+GGG | - | chr4.4:11970437-11970456 | None:intergenic | 35.0% | |
TGTCTGTCTTTATATGTACC+TGG | - | chr4.4:11970489-11970508 | None:intergenic | 35.0% | |
TGTGGAAGACCTAAAAATTG+TGG | - | chr4.4:11969396-11969415 | None:intergenic | 35.0% | |
TGTTTATAAGGCCCTATACA+AGG | + | chr4.4:11970423-11970442 | MS.gene27961:CDS | 35.0% | |
TTCAAAATGTCAGCTTCATG+AGG | - | chr4.4:11972322-11972341 | None:intergenic | 35.0% | |
TTCTCTGAACTACTCTAGAT+TGG | - | chr4.4:11973135-11973154 | None:intergenic | 35.0% | |
TTTGTAATCTGTTTATGGGG+CGG | + | chr4.4:11969933-11969952 | MS.gene27961:intron | 35.0% | |
! | ACTATTGCATTTGTTGACAC+TGG | + | chr4.4:11969465-11969484 | MS.gene27961:CDS | 35.0% |
! | ATTGGGTTGTTTGGTAATCA+AGG | + | chr4.4:11973325-11973344 | MS.gene27961:CDS | 35.0% |
! | CTGGGAATTTTCATTGGAAT+TGG | - | chr4.4:11972002-11972021 | None:intergenic | 35.0% |
! | GAGGTACTTTATAACCTTGA+AGG | + | chr4.4:11970158-11970177 | MS.gene27961:intron | 35.0% |
! | GTTCAATAAAGATTTGGTCC+AGG | + | chr4.4:11971833-11971852 | MS.gene27961:CDS | 35.0% |
! | TAACATTTTAAACGGCAGTG+AGG | - | chr4.4:11970048-11970067 | None:intergenic | 35.0% |
! | TACTTGATGATCCCTTAAAC+TGG | + | chr4.4:11971485-11971504 | MS.gene27961:intron | 35.0% |
! | TCAATAAAGATTTGGTCCAG+GGG | + | chr4.4:11971835-11971854 | MS.gene27961:CDS | 35.0% |
! | TCTTTTATTACTTTCCCAGC+TGG | + | chr4.4:11971702-11971721 | MS.gene27961:intron | 35.0% |
! | TGTAAAGATCCATGGACTAA+AGG | - | chr4.4:11971152-11971171 | None:intergenic | 35.0% |
!! | AAAAAAGCATCCGCCAAATA+AGG | - | chr4.4:11968782-11968801 | None:intergenic | 35.0% |
!! | AACCTTGCTATTGTGATTGA+GGG | - | chr4.4:11973109-11973128 | None:intergenic | 35.0% |
!! | ATCATTTTGGAAATGCTAGC+GGG | + | chr4.4:11969847-11969866 | MS.gene27961:CDS | 35.0% |
!! | ATTTTAACGATGACAGACAC+AGG | - | chr4.4:11973367-11973386 | None:intergenic | 35.0% |
!! | CATCATTTTGGAAATGCTAG+CGG | + | chr4.4:11969846-11969865 | MS.gene27961:CDS | 35.0% |
!! | GCACCATCCATTTTTCATAT+TGG | + | chr4.4:11972055-11972074 | MS.gene27961:intron | 35.0% |
!! | GTTGAAGAAGGTGTTTAAAG+GGG | + | chr4.4:11969114-11969133 | MS.gene27961:CDS | 35.0% |
!! | TTCTACAGTTCTAGACTACA+CGG | + | chr4.4:11973030-11973049 | MS.gene27961:CDS | 35.0% |
!!! | ACAATTTTTAGGTCTTCCAC+AGG | + | chr4.4:11969395-11969414 | MS.gene27961:CDS | 35.0% |
!!! | CAATTTTTAGGTCTTCCACA+GGG | + | chr4.4:11969396-11969415 | MS.gene27961:CDS | 35.0% |
AAAGGATGACATGCTCATAG+GGG | - | chr4.4:11971134-11971153 | None:intergenic | 40.0% | |
AACATAGCTTCTATTGCAGC+TGG | + | chr4.4:11969792-11969811 | MS.gene27961:CDS | 40.0% | |
AAGGCCCTATACAAGGAATT+TGG | + | chr4.4:11970430-11970449 | MS.gene27961:CDS | 40.0% | |
AATGCGACTATACTTGGAGT+TGG | + | chr4.4:11971226-11971245 | MS.gene27961:CDS | 40.0% | |
ACATCATACAAACCTGCTGT+TGG | - | chr4.4:11969201-11969220 | None:intergenic | 40.0% | |
ACCATTCACAGAAGGATTCA+TGG | - | chr4.4:11971967-11971986 | None:intergenic | 40.0% | |
AGCTGAAAACCATTCACAGA+AGG | - | chr4.4:11971975-11971994 | None:intergenic | 40.0% | |
AGGAATGTTTGACTCAACTG+AGG | + | chr4.4:11969653-11969672 | MS.gene27961:CDS | 40.0% | |
AGTTGAGTCAAACATTCCTC+TGG | - | chr4.4:11969652-11969671 | None:intergenic | 40.0% | |
ATACTGCTGAAGTTCATCCA+TGG | + | chr4.4:11971585-11971604 | MS.gene27961:intron | 40.0% | |
CAAGGAATTTGGAGGATTTG+CGG | + | chr4.4:11970441-11970460 | MS.gene27961:CDS | 40.0% | |
CCATTCACAGAAGGATTCAT+GGG | - | chr4.4:11971966-11971985 | None:intergenic | 40.0% | |
CGCTCCTGGAAGTTTAATAT+GGG | + | chr4.4:11972354-11972373 | MS.gene27961:CDS | 40.0% | |
CTAAAGGATGACATGCTCAT+AGG | - | chr4.4:11971136-11971155 | None:intergenic | 40.0% | |
CTACTGCAGCATTAAATCCA+GGG | + | chr4.4:11972816-11972835 | MS.gene27961:CDS | 40.0% | |
CTTGAATCAAAAAGCAACCC+TGG | - | chr4.4:11972836-11972855 | None:intergenic | 40.0% | |
GAAGTCATGTATAGCTAACC+AGG | - | chr4.4:11971281-11971300 | None:intergenic | 40.0% | |
GACAACAATGCCATGTCTAT+TGG | - | chr4.4:11971058-11971077 | None:intergenic | 40.0% | |
GCACCAATTGTAAAGATCCA+TGG | - | chr4.4:11971160-11971179 | None:intergenic | 40.0% | |
GCTTGTCAATCACTCCAAAT+AGG | + | chr4.4:11971002-11971021 | MS.gene27961:CDS | 40.0% | |
GGACACGACTTGAATATGAA+CGG | - | chr4.4:11970600-11970619 | None:intergenic | 40.0% | |
GTTATGTATTACTCTGCCAG+AGG | + | chr4.4:11972274-11972293 | MS.gene27961:CDS | 40.0% | |
GTTTATAACCACTTCAGACG+CGG | + | chr4.4:11968642-11968661 | MS.gene27961:CDS | 40.0% | |
TAAAAATTGTGGAGTGTGCG+TGG | - | chr4.4:11969385-11969404 | None:intergenic | 40.0% | |
TAAGACTTGTCTCTCTCCAT+TGG | - | chr4.4:11973254-11973273 | None:intergenic | 40.0% | |
TCGCTCCTGGAAGTTTAATA+TGG | + | chr4.4:11972353-11972372 | MS.gene27961:CDS | 40.0% | |
TTCAACAACGGTTGCAGTAT+AGG | + | chr4.4:11972925-11972944 | MS.gene27961:intron | 40.0% | |
TTGGTACTTAGTACTTGGCA+GGG | + | chr4.4:11970084-11970103 | MS.gene27961:intron | 40.0% | |
TTGTTGTCAGCTACAAAAGC+TGG | + | chr4.4:11971070-11971089 | MS.gene27961:CDS | 40.0% | |
! | ACCCTGATAATGAGAAGTAG+GGG | - | chr4.4:11968610-11968629 | None:intergenic | 40.0% |
! | ACGCACACTCCACAATTTTT+AGG | + | chr4.4:11969384-11969403 | MS.gene27961:CDS | 40.0% |
! | ACTTTTACTGAAACCCCGTA+TGG | - | chr4.4:11973208-11973227 | None:intergenic | 40.0% |
! | CACCCTGATAATGAGAAGTA+GGG | - | chr4.4:11968611-11968630 | None:intergenic | 40.0% |
! | GAAGTTTAATATGGGCTGCT+TGG | + | chr4.4:11972362-11972381 | MS.gene27961:CDS | 40.0% |
! | TCACCCTGATAATGAGAAGT+AGG | - | chr4.4:11968612-11968631 | None:intergenic | 40.0% |
! | TCAGCAAAACTAGGGTGTTT+AGG | - | chr4.4:11969498-11969517 | None:intergenic | 40.0% |
! | TTGTTCTAGGCAACCAAAAC+TGG | - | chr4.4:11971555-11971574 | None:intergenic | 40.0% |
! | TTTGGAAGGATTGGGTTGTT+TGG | + | chr4.4:11973316-11973335 | MS.gene27961:CDS | 40.0% |
!! | ATTTTTGTTGTGCAAGCTGC+TGG | + | chr4.4:11971094-11971113 | MS.gene27961:CDS | 40.0% |
!! | CAACCTTGCTATTGTGATTG+AGG | - | chr4.4:11973110-11973129 | None:intergenic | 40.0% |
!! | CAGATTCTTGGCTGTTTCTA+AGG | - | chr4.4:11971922-11971941 | None:intergenic | 40.0% |
!! | TCGCAGCATTGCTGTTTATA+AGG | + | chr4.4:11970411-11970430 | MS.gene27961:intron | 40.0% |
!! | TCTACAGTTCTAGACTACAC+GGG | + | chr4.4:11973031-11973050 | MS.gene27961:CDS | 40.0% |
!! | TTACCTTGGTTTGTGAAGTC+TGG | - | chr4.4:11968682-11968701 | None:intergenic | 40.0% |
!! | TTTTGAAGGGATCATATGGG+AGG | - | chr4.4:11970879-11970898 | None:intergenic | 40.0% |
!!! | AGAAGTGTCCAATGTGGTTT+TGG | + | chr4.4:11969338-11969357 | MS.gene27961:CDS | 40.0% |
AAAACCACTCCCCATGTCAA+AGG | - | chr4.4:11972789-11972808 | None:intergenic | 45.0% | |
AAAATCCGGAGTAACCTCAC+AGG | - | chr4.4:11969568-11969587 | None:intergenic | 45.0% | |
AAACCACTCCCCATGTCAAA+GGG | - | chr4.4:11972788-11972807 | None:intergenic | 45.0% | |
AATGGCAGCAGGACTGAAAT+TGG | - | chr4.4:11972660-11972679 | None:intergenic | 45.0% | |
AATTTCAGTCCTGCTGCCAT+TGG | + | chr4.4:11972659-11972678 | MS.gene27961:CDS | 45.0% | |
AGCCCCTACTTCTCATTATC+AGG | + | chr4.4:11968605-11968624 | MS.gene27961:CDS | 45.0% | |
AGTGGCACTGTTGTGTTTCT+TGG | + | chr4.4:11968512-11968531 | MS.gene27961:CDS | 45.0% | |
ATAAACTCGATCGTGAGAGG+TGG | - | chr4.4:11971182-11971201 | None:intergenic | 45.0% | |
ATATCAGGAGGACGCCTATT+TGG | - | chr4.4:11971019-11971038 | None:intergenic | 45.0% | |
ATCCATTCAATGCTCCTGCT+CGG | + | chr4.4:11969532-11969551 | MS.gene27961:CDS | 45.0% | |
ATCTGTGCTATGATGGCAAC+CGG | + | chr4.4:11968854-11968873 | MS.gene27961:intron | 45.0% | |
ATGGCAGCAGGACTGAAATT+GGG | - | chr4.4:11972659-11972678 | None:intergenic | 45.0% | |
CAACAACCACTGGAATTCCA+TGG | - | chr4.4:11969821-11969840 | None:intergenic | 45.0% | |
CAACAGTGGGAAGCCAATAA+TGG | + | chr4.4:11972715-11972734 | MS.gene27961:CDS | 45.0% | |
CACGAACCAGATGGAAAATC+CGG | - | chr4.4:11969582-11969601 | None:intergenic | 45.0% | |
CACGACTTGAATATGAACGG+TGG | - | chr4.4:11970597-11970616 | None:intergenic | 45.0% | |
CCATGTCCATCACCATCAAA+GGG | - | chr4.4:11969690-11969709 | None:intergenic | 45.0% | |
CCCATGAATCCTTCTGTGAA+TGG | + | chr4.4:11971963-11971982 | MS.gene27961:CDS | 45.0% | |
CGTCTCTGTATGACAACAGT+GGG | + | chr4.4:11972702-11972721 | MS.gene27961:CDS | 45.0% | |
GAAAAATGGATGGTGCACCT+TGG | - | chr4.4:11972051-11972070 | None:intergenic | 45.0% | |
GAACCAGACTTCACAAACCA+AGG | + | chr4.4:11968676-11968695 | MS.gene27961:CDS | 45.0% | |
GAATTCCAGTGGTTGTTGCT+GGG | + | chr4.4:11969823-11969842 | MS.gene27961:CDS | 45.0% | |
GAGCTTGGTTTCAATCAGGT+GGG | + | chr4.4:11969418-11969437 | MS.gene27961:CDS | 45.0% | |
GCAGCCCATATTAAACTTCC+AGG | - | chr4.4:11972361-11972380 | None:intergenic | 45.0% | |
GCATGTCATCCTTTAGTCCA+TGG | + | chr4.4:11971140-11971159 | MS.gene27961:CDS | 45.0% | |
GCCCCTACTTCTCATTATCA+GGG | + | chr4.4:11968606-11968625 | MS.gene27961:CDS | 45.0% | |
GCCCTATACAAGGAATTTGG+AGG | + | chr4.4:11970433-11970452 | MS.gene27961:CDS | 45.0% | |
GCTACTGCAGCATTAAATCC+AGG | + | chr4.4:11972815-11972834 | MS.gene27961:CDS | 45.0% | |
GCTATAAACTCGATCGTGAG+AGG | - | chr4.4:11971185-11971204 | None:intergenic | 45.0% | |
GCTGTTGCTAGCATTAATGG+TGG | + | chr4.4:11972217-11972236 | MS.gene27961:CDS | 45.0% | |
GTGGCACTGTTGTGTTTCTT+GGG | + | chr4.4:11968513-11968532 | MS.gene27961:CDS | 45.0% | |
GTTGGTACTTAGTACTTGGC+AGG | + | chr4.4:11970083-11970102 | MS.gene27961:intron | 45.0% | |
GTTGGTTGGAGTTCTCCATA+CGG | + | chr4.4:11973190-11973209 | MS.gene27961:CDS | 45.0% | |
TACACATTAAGAGGTTCCCC+TGG | - | chr4.4:11971854-11971873 | None:intergenic | 45.0% | |
TATGACCGCTGAGCCATTAT+TGG | - | chr4.4:11972731-11972750 | None:intergenic | 45.0% | |
TCCATGTCCATCACCATCAA+AGG | - | chr4.4:11969691-11969710 | None:intergenic | 45.0% | |
TCGTGCAATAGGAAGCTTGT+TGG | + | chr4.4:11969597-11969616 | MS.gene27961:CDS | 45.0% | |
TCTATTGCAGCTGGAAACCA+TGG | + | chr4.4:11969801-11969820 | MS.gene27961:CDS | 45.0% | |
TGCAAGCTGCTGGAAATACT+GGG | + | chr4.4:11971104-11971123 | MS.gene27961:CDS | 45.0% | |
TGCCCTCAATCACAATAGCA+AGG | + | chr4.4:11973104-11973123 | MS.gene27961:CDS | 45.0% | |
TGGAAACCATGGAATTCCAG+TGG | + | chr4.4:11969812-11969831 | MS.gene27961:CDS | 45.0% | |
TGGCACTGTTGTGTTTCTTG+GGG | + | chr4.4:11968514-11968533 | MS.gene27961:CDS | 45.0% | |
TGGTACTTAGTACTTGGCAG+GGG | + | chr4.4:11970085-11970104 | MS.gene27961:intron | 45.0% | |
TGTTGTTGCAGCTATTGACC+AGG | + | chr4.4:11970468-11970487 | MS.gene27961:CDS | 45.0% | |
TTCCTATTGCACGAACCAGA+TGG | - | chr4.4:11969591-11969610 | None:intergenic | 45.0% | |
TTGGTTGGAGTTCTCCATAC+GGG | + | chr4.4:11973191-11973210 | MS.gene27961:CDS | 45.0% | |
! | AATGATGTCTGGGACAAGCA+TGG | + | chr4.4:11972586-11972605 | MS.gene27961:CDS | 45.0% |
! | CGTGCAATAGGAAGCTTGTT+GGG | + | chr4.4:11969598-11969617 | MS.gene27961:CDS | 45.0% |
! | GTGAAAGGAGTGCATTACCT+TGG | - | chr4.4:11968696-11968715 | None:intergenic | 45.0% |
! | GTGTTTTATCGAGGTACGCA+CGG | + | chr4.4:11970809-11970828 | MS.gene27961:intron | 45.0% |
! | GTTACTCCGGATTTTCCATC+TGG | + | chr4.4:11969573-11969592 | MS.gene27961:CDS | 45.0% |
! | GTTGTTGCTGGGCATCATTT+TGG | + | chr4.4:11969834-11969853 | MS.gene27961:CDS | 45.0% |
! | TGTGCTTGTTAACCAACAGC+AGG | + | chr4.4:11969186-11969205 | MS.gene27961:CDS | 45.0% |
! | TTCCATCTGGTTCGTGCAAT+AGG | + | chr4.4:11969586-11969605 | MS.gene27961:CDS | 45.0% |
!! | AGATTGGTTTAGCTCTGGTG+AGG | - | chr4.4:11972756-11972775 | None:intergenic | 45.0% |
!! | GAGAAGAGAAGTGTCCAATG+TGG | + | chr4.4:11969332-11969351 | MS.gene27961:CDS | 45.0% |
!! | GATTGGTTTAGCTCTGGTGA+GGG | - | chr4.4:11972755-11972774 | None:intergenic | 45.0% |
!! | GTGCAATAGGAAGCTTGTTG+GGG | + | chr4.4:11969599-11969618 | MS.gene27961:CDS | 45.0% |
!! | TTCTAAGGCCTGGTTGATAC+TGG | - | chr4.4:11971907-11971926 | None:intergenic | 45.0% |
!! | TTTTGGAAATGCTAGCGGGA+TGG | + | chr4.4:11969851-11969870 | MS.gene27961:CDS | 45.0% |
AAACCAAATCTGGTCGCTCC+TGG | + | chr4.4:11972340-11972359 | MS.gene27961:CDS | 50.0% | |
AACAGCTCAACTGCCAGCTT+TGG | + | chr4.4:11973298-11973317 | MS.gene27961:CDS | 50.0% | |
ACCAGCAGCACTCAGATTCT+TGG | - | chr4.4:11971934-11971953 | None:intergenic | 50.0% | |
ACTCGCTTCTCTCTTGCCAA+TGG | + | chr4.4:11973235-11973254 | MS.gene27961:CDS | 50.0% | |
CAAAGGGAGTTGCTGGAGAT+TGG | - | chr4.4:11972772-11972791 | None:intergenic | 50.0% | |
CAACCCAATCCTTCCAAAGC+TGG | - | chr4.4:11973314-11973333 | None:intergenic | 50.0% | |
CAGCAACTCCCTTTGACATG+GGG | + | chr4.4:11972777-11972796 | MS.gene27961:CDS | 50.0% | |
CAGGGAGCTTGGTTTCAATC+AGG | + | chr4.4:11969414-11969433 | MS.gene27961:CDS | 50.0% | |
CCAGCAACTCCCTTTGACAT+GGG | + | chr4.4:11972776-11972795 | MS.gene27961:CDS | 50.0% | |
GAAGACTGTCCTCTGGATCT+GGG | - | chr4.4:11972300-11972319 | None:intergenic | 50.0% | |
GACAGTGCTTCTCCCTTTGA+TGG | + | chr4.4:11969675-11969694 | MS.gene27961:CDS | 50.0% | |
GATGACATGCTCATAGGGGA+AGG | - | chr4.4:11971130-11971149 | None:intergenic | 50.0% | |
GATTGAAACCAAGCTCCCTG+TGG | - | chr4.4:11969414-11969433 | None:intergenic | 50.0% | |
GCAGCATCTGCTATAACCAG+AGG | + | chr4.4:11969633-11969652 | MS.gene27961:CDS | 50.0% | |
GCGTCTCTGTATGACAACAG+TGG | + | chr4.4:11972701-11972720 | MS.gene27961:CDS | 50.0% | |
GGAAGCCAATAATGGCTCAG+CGG | + | chr4.4:11972723-11972742 | MS.gene27961:CDS | 50.0% | |
GGAATTCCAGTGGTTGTTGC+TGG | + | chr4.4:11969822-11969841 | MS.gene27961:CDS | 50.0% | |
GGAGCTTGGTTTCAATCAGG+TGG | + | chr4.4:11969417-11969436 | MS.gene27961:CDS | 50.0% | |
GGGGCTGTTGCTAGCATTAA+TGG | + | chr4.4:11972214-11972233 | MS.gene27961:CDS | 50.0% | |
GTGCAAGCTGCTGGAAATAC+TGG | + | chr4.4:11971103-11971122 | MS.gene27961:CDS | 50.0% | |
GTTGTCATACAGAGACGCTG+TGG | - | chr4.4:11972699-11972718 | None:intergenic | 50.0% | |
TCATGAGGAAGACTGTCCTC+TGG | - | chr4.4:11972307-11972326 | None:intergenic | 50.0% | |
TCCAGCAACTCCCTTTGACA+TGG | + | chr4.4:11972775-11972794 | MS.gene27961:CDS | 50.0% | |
TGACACTTGACAGGCCTTCA+AGG | - | chr4.4:11970175-11970194 | None:intergenic | 50.0% | |
TGGTCTCTCCAGTATCAACC+AGG | + | chr4.4:11971896-11971915 | MS.gene27961:CDS | 50.0% | |
TGGTTGGAGTTCTCCATACG+GGG | + | chr4.4:11973192-11973211 | MS.gene27961:CDS | 50.0% | |
TGTTCTCAGGTGTACCAGCT+GGG | - | chr4.4:11971719-11971738 | None:intergenic | 50.0% | |
TTAGTACTTGGCAGGGGTCT+TGG | + | chr4.4:11970091-11970110 | MS.gene27961:intron | 50.0% | |
TTGGCAAGAGAGAAGCGAGT+TGG | - | chr4.4:11973235-11973254 | None:intergenic | 50.0% | |
! | AATGCTCCTGCTCGGTTTTG+TGG | + | chr4.4:11969540-11969559 | MS.gene27961:CDS | 50.0% |
! | GGGTTTGAAACTGCTGGAGA+AGG | + | chr4.4:11969438-11969457 | MS.gene27961:CDS | 50.0% |
! | TCAGGTGGGTTTGAAACTGC+TGG | + | chr4.4:11969432-11969451 | MS.gene27961:CDS | 50.0% |
!! | AACCGAGCAGGAGCATTGAA+TGG | - | chr4.4:11969537-11969556 | None:intergenic | 50.0% |
!! | ACTGCCAGCTTTGGAAGGAT+TGG | + | chr4.4:11973307-11973326 | MS.gene27961:CDS | 50.0% |
!! | CCCTTTGATGGTGATGGACA+TGG | + | chr4.4:11969687-11969706 | MS.gene27961:CDS | 50.0% |
!! | CTGCCAGCTTTGGAAGGATT+GGG | + | chr4.4:11973308-11973327 | MS.gene27961:CDS | 50.0% |
!! | GCTGGAGATTGGTTTAGCTC+TGG | - | chr4.4:11972761-11972780 | None:intergenic | 50.0% |
!! | GCTTCTCCCTTTGATGGTGA+TGG | + | chr4.4:11969681-11969700 | MS.gene27961:CDS | 50.0% |
!! | TCTTGGCTGTTTCTAAGGCC+TGG | - | chr4.4:11971917-11971936 | None:intergenic | 50.0% |
ACTCCCTTTGACATGGGGAG+TGG | + | chr4.4:11972782-11972801 | MS.gene27961:CDS | 55.0% | |
ATGGCTGCACCTCATGTTGC+TGG | + | chr4.4:11972605-11972624 | MS.gene27961:CDS | 55.0% | |
CCCATGTCAAAGGGAGTTGC+TGG | - | chr4.4:11972779-11972798 | None:intergenic | 55.0% | |
CTTCCAGGAGCGACCAGATT+TGG | - | chr4.4:11972346-11972365 | None:intergenic | 55.0% | |
GCAGCAAGACCAGCAACATG+AGG | - | chr4.4:11972617-11972636 | None:intergenic | 55.0% | |
GGAAGACTGTCCTCTGGATC+TGG | - | chr4.4:11972301-11972320 | None:intergenic | 55.0% | |
GTCATACAGAGACGCTGTGG+TGG | - | chr4.4:11972696-11972715 | None:intergenic | 55.0% | |
GTGTTCTCAGGTGTACCAGC+TGG | - | chr4.4:11971720-11971739 | None:intergenic | 55.0% | |
TAGGTCTTCCACAGGGAGCT+TGG | + | chr4.4:11969403-11969422 | MS.gene27961:CDS | 55.0% | |
TGATGCCCAGCAACAACCAC+TGG | - | chr4.4:11969831-11969850 | None:intergenic | 55.0% | |
TGGCACCTGTGAGGTTACTC+CGG | + | chr4.4:11969560-11969579 | MS.gene27961:CDS | 55.0% | |
! | GCCAAGAATCTGAGTGCTGC+TGG | + | chr4.4:11971930-11971949 | MS.gene27961:CDS | 55.0% |
! | GGTGGAAAGCGCAGATCCAA+TGG | - | chr4.4:11972678-11972697 | None:intergenic | 55.0% |
!! | GCTCAACTGCCAGCTTTGGA+AGG | + | chr4.4:11973302-11973321 | MS.gene27961:CDS | 55.0% |
!! | TCGGTTTTGTGGCACCTGTG+AGG | + | chr4.4:11969551-11969570 | MS.gene27961:CDS | 55.0% |
AGCGCAGATCCAATGGCAGC+AGG | - | chr4.4:11972671-11972690 | None:intergenic | 60.0% | |
GCTGGCAGTTGAGCTGTTGC+TGG | - | chr4.4:11973296-11973315 | None:intergenic | 60.0% | |
! | CAGGTGCCACAAAACCGAGC+AGG | - | chr4.4:11969549-11969568 | None:intergenic | 60.0% |
!! | ACTTCAGACGCGGTGCTGCT+GGG | + | chr4.4:11968652-11968671 | MS.gene27961:CDS | 60.0% |
CAGCAGCACCGCGTCTGAAG+TGG | - | chr4.4:11968653-11968672 | None:intergenic | 65.0% | |
GTCCTCTGGATCTGGGCCTC+TGG | - | chr4.4:11972293-11972312 | None:intergenic | 65.0% | |
TGCCAGAGGCCCAGATCCAG+AGG | + | chr4.4:11972288-11972307 | MS.gene27961:CDS | 65.0% | |
!! | CACTTCAGACGCGGTGCTGC+TGG | + | chr4.4:11968651-11968670 | MS.gene27961:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 11968483 | 11973396 | 11968483 | ID=MS.gene27961 |
chr4.4 | mRNA | 11968483 | 11973396 | 11968483 | ID=MS.gene27961.t1;Parent=MS.gene27961 |
chr4.4 | exon | 11968483 | 11968697 | 11968483 | ID=MS.gene27961.t1.exon1;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11968483 | 11968697 | 11968483 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
chr4.4 | exon | 11969048 | 11969207 | 11969048 | ID=MS.gene27961.t1.exon2;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11969048 | 11969207 | 11969048 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
chr4.4 | exon | 11969315 | 11969712 | 11969315 | ID=MS.gene27961.t1.exon3;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11969315 | 11969712 | 11969315 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
chr4.4 | exon | 11969791 | 11969886 | 11969791 | ID=MS.gene27961.t1.exon4;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11969791 | 11969886 | 11969791 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
chr4.4 | exon | 11970417 | 11970489 | 11970417 | ID=MS.gene27961.t1.exon5;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11970417 | 11970489 | 11970417 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
chr4.4 | exon | 11970974 | 11971256 | 11970974 | ID=MS.gene27961.t1.exon6;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11970974 | 11971256 | 11970974 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
chr4.4 | exon | 11971721 | 11972052 | 11971721 | ID=MS.gene27961.t1.exon7;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11971721 | 11972052 | 11971721 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
chr4.4 | exon | 11972148 | 11972418 | 11972148 | ID=MS.gene27961.t1.exon8;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11972148 | 11972418 | 11972148 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
chr4.4 | exon | 11972573 | 11972854 | 11972573 | ID=MS.gene27961.t1.exon9;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11972573 | 11972854 | 11972573 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
chr4.4 | exon | 11972984 | 11973396 | 11972984 | ID=MS.gene27961.t1.exon10;Parent=MS.gene27961.t1 |
chr4.4 | CDS | 11972984 | 11973396 | 11972984 | ID=cds.MS.gene27961.t1;Parent=MS.gene27961.t1 |
Gene Sequence |
Protein sequence |