Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28832.t1 | XP_003625999.1 | 95.9 | 218 | 7 | 1 | 1 | 218 | 1 | 216 | 3.00E-107 | 397.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28832.t1 | Q93W77 | 68.2 | 201 | 54 | 3 | 26 | 218 | 33 | 231 | 6.1e-64 | 245.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28832.t1 | G7KTN7 | 95.9 | 218 | 7 | 1 | 1 | 218 | 1 | 216 | 2.2e-107 | 397.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050432 | MS.gene28832 | 0.811555 | 6.60E-51 | -1.69E-46 |
| MS.gene050444 | MS.gene28832 | 0.859849 | 3.11E-63 | -1.69E-46 |
| MS.gene051228 | MS.gene28832 | 0.848357 | 6.45E-60 | -1.69E-46 |
| MS.gene051617 | MS.gene28832 | 0.801335 | 9.45E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene28832 | 0.842612 | 2.33E-58 | -1.69E-46 |
| MS.gene052379 | MS.gene28832 | 0.817826 | 2.70E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene28832 | 0.829238 | 5.76E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene28832 | 0.820993 | 5.11E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene28832 | 0.826579 | 2.51E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene28832 | 0.865994 | 3.94E-65 | -1.69E-46 |
| MS.gene053384 | MS.gene28832 | 0.815604 | 8.49E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene28832 | 0.82252 | 2.27E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene28832 | 0.80272 | 4.91E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene28832 | 0.828219 | 1.02E-54 | -1.69E-46 |
| MS.gene054955 | MS.gene28832 | 0.82936 | 5.38E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene28832 | 0.827394 | 1.60E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene28832 | 0.805705 | 1.17E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene28832 | 0.831121 | 2.00E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene28832 | 0.827604 | 1.43E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene28832 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene28832 | 0.820435 | 6.87E-53 | -1.69E-46 |
| MS.gene05664 | MS.gene28832 | 0.807953 | 3.93E-50 | -1.69E-46 |
| MS.gene056947 | MS.gene28832 | 0.802309 | 5.96E-49 | -1.69E-46 |
| MS.gene057032 | MS.gene28832 | 0.818737 | 1.68E-52 | -1.69E-46 |
| MS.gene05735 | MS.gene28832 | 0.819215 | 1.31E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene28832 | 0.865267 | 6.68E-65 | -1.69E-46 |
| MS.gene057927 | MS.gene28832 | 0.876033 | 1.93E-68 | -1.69E-46 |
| MS.gene058006 | MS.gene28832 | 0.825779 | 3.89E-54 | -1.69E-46 |
| MS.gene058082 | MS.gene28832 | 0.81761 | 3.02E-52 | -1.69E-46 |
| MS.gene058158 | MS.gene28832 | -0.813539 | 2.43E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene28832 | 0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene28832 | 0.801927 | 7.15E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene28832 | 0.821092 | 4.85E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene28832 | 0.823236 | 1.54E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene28832 | 0.80177 | 7.70E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene28832 | 0.827925 | 1.19E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene28832 | 0.832467 | 9.30E-56 | -1.69E-46 |
| MS.gene060818 | MS.gene28832 | 0.824845 | 6.47E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene28832 | 0.832238 | 1.06E-55 | -1.69E-46 |
| MS.gene061051 | MS.gene28832 | -0.841424 | 4.79E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28832.t1 | MTR_7g109850 | 95.872 | 218 | 7 | 1 | 1 | 218 | 1 | 216 | 8.48e-152 | 420 |
| MS.gene28832.t1 | MTR_8g038785 | 87.313 | 134 | 15 | 1 | 1 | 134 | 1 | 132 | 1.12e-74 | 236 |
| MS.gene28832.t1 | MTR_2g005900 | 42.308 | 156 | 84 | 3 | 66 | 216 | 68 | 222 | 1.06e-29 | 110 |
| MS.gene28832.t1 | MTR_2g036690 | 37.267 | 161 | 99 | 2 | 51 | 210 | 71 | 230 | 7.38e-24 | 95.5 |
| MS.gene28832.t1 | MTR_2g036690 | 44.248 | 113 | 59 | 2 | 51 | 160 | 71 | 182 | 7.57e-20 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28832.t1 | AT4G01940 | 67.822 | 202 | 55 | 3 | 25 | 218 | 32 | 231 | 4.89e-89 | 262 |
| MS.gene28832.t1 | AT5G49940 | 35.897 | 195 | 109 | 5 | 27 | 216 | 51 | 234 | 3.88e-26 | 101 |
| MS.gene28832.t1 | AT4G25910 | 33.180 | 217 | 128 | 6 | 12 | 212 | 11 | 226 | 9.38e-24 | 95.1 |
| MS.gene28832.t1 | AT5G49940 | 53.165 | 79 | 35 | 1 | 71 | 149 | 85 | 161 | 1.71e-21 | 87.8 |
Find 44 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAACCACAACTATGAAAA+TGG | 0.150095 | 7.4:-5585265 | MS.gene28832:CDS |
| CACTTGCACGATATCTTTAA+TGG | 0.162531 | 7.4:+5585206 | None:intergenic |
| CGTGTTCTTAAGGAGAAATT+TGG | 0.227866 | 7.4:-5585234 | MS.gene28832:CDS |
| TTCGTTGGTATTGAACAAAT+TGG | 0.356289 | 7.4:+5585600 | None:intergenic |
| ATCCCGGAGAAGACTGGTTC+TGG | 0.389633 | 7.4:+5585451 | None:intergenic |
| AAGGTAACATTGAGAATATC+TGG | 0.389748 | 7.4:+5584156 | None:intergenic |
| CTGGTTCTGGTTAGCGGTAG+AGG | 0.412467 | 7.4:+5585464 | None:intergenic |
| GGGAATCGAACGTGTTCTTA+AGG | 0.422078 | 7.4:-5585244 | MS.gene28832:CDS |
| TAACCAGAACCAGTCTTCTC+CGG | 0.444988 | 7.4:-5585454 | MS.gene28832:CDS |
| TCAACCACAACTATGAAAAT+GGG | 0.480712 | 7.4:-5585264 | MS.gene28832:CDS |
| AGTATAATCCCGGAGAAGAC+TGG | 0.483617 | 7.4:+5585445 | None:intergenic |
| GGACCTGAGTCCATTGGATC+AGG | 0.493608 | 7.4:-5584207 | MS.gene28832:CDS |
| AAATTCAAATTCAGTTTCGT+TGG | 0.499228 | 7.4:+5585585 | None:intergenic |
| AGGTGTTAAAGCTGCGATCA+AGG | 0.501612 | 7.4:-5584187 | MS.gene28832:CDS |
| GATGTTGTATCCGTTGAAAA+CGG | 0.506210 | 7.4:-5585333 | MS.gene28832:CDS |
| TTCATAGTTGTGGTTGAGCT+AGG | 0.507201 | 7.4:+5585270 | None:intergenic |
| AACGGTGAGGTCGAATTTCG+TGG | 0.510902 | 7.4:+5585419 | None:intergenic |
| CCTCCGTCAGAGATGAGGTA+AGG | 0.518971 | 7.4:+5585363 | None:intergenic |
| TATGTTGGACCTGAGTCCAT+TGG | 0.522225 | 7.4:-5584213 | MS.gene28832:CDS |
| CGCCCTTACCTCATCTCTGA+CGG | 0.525777 | 7.4:-5585366 | MS.gene28832:CDS |
| AGAAGACTGGTTCTGGTTAG+CGG | 0.534911 | 7.4:+5585458 | None:intergenic |
| AACCAGAACCAGTCTTCTCC+GGG | 0.537520 | 7.4:-5585453 | MS.gene28832:CDS |
| TTCGTGGCGGAGTATAATCC+CGG | 0.541925 | 7.4:+5585435 | None:intergenic |
| GTCGTTTCTCTTAAGCTACA+AGG | 0.546334 | 7.4:-5585309 | MS.gene28832:CDS |
| AACGAGATCTACGTTTGAAA+CGG | 0.549378 | 7.4:+5585401 | None:intergenic |
| AATTGCTACCTAGGTGGAGA+AGG | 0.550345 | 7.4:+5584137 | None:intergenic |
| GACTGTGTTGTGGAATATGT+TGG | 0.562518 | 7.4:-5584228 | MS.gene28832:CDS |
| AGCAAGGGAAACAACGGTTG+AGG | 0.563035 | 7.4:-5585169 | MS.gene28832:intron |
| TGAAGGTGGTGACTGTGTTG+TGG | 0.573198 | 7.4:-5584238 | MS.gene28832:CDS |
| AGCTTTAACACCTGATCCAA+TGG | 0.583998 | 7.4:+5584197 | None:intergenic |
| CTCCGTCAGAGATGAGGTAA+GGG | 0.586257 | 7.4:+5585364 | None:intergenic |
| CGTTTCCTCCGTCAGAGATG+AGG | 0.588496 | 7.4:+5585358 | None:intergenic |
| CAATGTTACCTTCTCCACCT+AGG | 0.589162 | 7.4:-5584145 | None:intergenic |
| GGTTAGCGGTAGAGGATGAA+CGG | 0.599940 | 7.4:+5585472 | None:intergenic |
| TGTTTGATGATGATCAAGCA+AGG | 0.620834 | 7.4:-5585185 | MS.gene28832:CDS |
| GTTTGATGATGATCAAGCAA+GGG | 0.625912 | 7.4:-5585184 | MS.gene28832:CDS |
| CCTTACCTCATCTCTGACGG+AGG | 0.627247 | 7.4:-5585363 | MS.gene28832:CDS |
| TCATCTAGAGATACTGAGAC+CGG | 0.630070 | 7.4:-5584301 | MS.gene28832:CDS |
| ACACCTGATCCAATGGACTC+AGG | 0.634250 | 7.4:+5584204 | None:intergenic |
| GAATTAAATTGCTACCTAGG+TGG | 0.648629 | 7.4:+5584131 | None:intergenic |
| TGATCAAGCAAGGGAAACAA+CGG | 0.689446 | 7.4:-5585175 | MS.gene28832:CDS |
| GATCTACGTTTGAAACGGTG+AGG | 0.706207 | 7.4:+5585406 | None:intergenic |
| AGAGGATGAACGGATTACTG+TGG | 0.730832 | 7.4:+5585482 | None:intergenic |
| GGTGAGGTCGAATTTCGTGG+CGG | 0.777998 | 7.4:+5585422 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACTATTATTTATCTTTTA+TGG | - | chr7.4:5584643-5584662 | MS.gene28832:intron | 10.0% |
| !!! | AATGTTTTTATAACCTATAT+TGG | - | chr7.4:5584924-5584943 | MS.gene28832:intron | 15.0% |
| !! | AATAGTAAATGCAAAAAGTA+AGG | + | chr7.4:5584631-5584650 | None:intergenic | 20.0% |
| !! | ATAGTAAATGCAAAAAGTAA+GGG | + | chr7.4:5584630-5584649 | None:intergenic | 20.0% |
| !! | ATATTAGTTAACATCATGAA+AGG | + | chr7.4:5584789-5584808 | None:intergenic | 20.0% |
| !! | TTGGATAAATAACTTATTTG+CGG | - | chr7.4:5584824-5584843 | MS.gene28832:intron | 20.0% |
| !!! | TGATATTGTGAAATTGATTT+TGG | + | chr7.4:5585291-5585310 | None:intergenic | 20.0% |
| ! | AAATTCAAATTCAGTTTCGT+TGG | + | chr7.4:5584179-5584198 | None:intergenic | 25.0% |
| ! | TAGTAAATGCAAAAAGTAAG+GGG | + | chr7.4:5584629-5584648 | None:intergenic | 25.0% |
| ! | TGAAACCAAACATAAACTTA+GGG | + | chr7.4:5585046-5585065 | None:intergenic | 25.0% |
| ! | TGTTAACTAATATAGCAACT+AGG | - | chr7.4:5584796-5584815 | MS.gene28832:intron | 25.0% |
| ! | TTAGAATCAGTGTATGTTAT+TGG | + | chr7.4:5585347-5585366 | None:intergenic | 25.0% |
| !! | ATGAATGTTAGTTGATGTTT+GGG | - | chr7.4:5585412-5585431 | MS.gene28832:CDS | 25.0% |
| !! | CTTTTATGGTTGTTAATGAT+TGG | - | chr7.4:5584657-5584676 | MS.gene28832:intron | 25.0% |
| !!! | TTCCTTTTTAAGCTAGAAAT+TGG | - | chr7.4:5585161-5585180 | MS.gene28832:intron | 25.0% |
| AAGGTAACATTGAGAATATC+TGG | + | chr7.4:5585608-5585627 | None:intergenic | 30.0% | |
| AGACCGGCAATTAAAAATTA+CGG | - | chr7.4:5585476-5585495 | MS.gene28832:CDS | 30.0% | |
| CCTATATTGGAGAACTTATA+AGG | - | chr7.4:5584937-5584956 | MS.gene28832:intron | 30.0% | |
| CCTTATAAGTTCTCCAATAT+AGG | + | chr7.4:5584940-5584959 | None:intergenic | 30.0% | |
| GCTTAAAAAGGAATCAATTC+TGG | + | chr7.4:5585154-5585173 | None:intergenic | 30.0% | |
| GTGAAACCAAACATAAACTT+AGG | + | chr7.4:5585047-5585066 | None:intergenic | 30.0% | |
| TAAAAAGGAATCAATTCTGG+AGG | + | chr7.4:5585151-5585170 | None:intergenic | 30.0% | |
| TCAACCACAACTATGAAAAT+GGG | - | chr7.4:5584497-5584516 | MS.gene28832:intron | 30.0% | |
| ! | GAAGTTCTTGAATTTTGCTT+TGG | + | chr7.4:5584257-5584276 | None:intergenic | 30.0% |
| ! | GATGAATGTTAGTTGATGTT+TGG | - | chr7.4:5585411-5585430 | MS.gene28832:CDS | 30.0% |
| ! | TTCGTTGGTATTGAACAAAT+TGG | + | chr7.4:5584164-5584183 | None:intergenic | 30.0% |
| ! | TTTGGTTAAAAGTGAGTTGA+AGG | + | chr7.4:5585273-5585292 | None:intergenic | 30.0% |
| !! | CAAAAGTGATTTTAAAGGTG+TGG | - | chr7.4:5585079-5585098 | MS.gene28832:intron | 30.0% |
| !! | CTCCAATTTCTAGCTTAAAA+AGG | + | chr7.4:5585166-5585185 | None:intergenic | 30.0% |
| !!! | CACACCTTTAAAATCACTTT+TGG | + | chr7.4:5585081-5585100 | None:intergenic | 30.0% |
| !!! | TGAGATTGTGTTGTTTTTGT+TGG | + | chr7.4:5584208-5584227 | None:intergenic | 30.0% |
| AACGAGATCTACGTTTGAAA+CGG | + | chr7.4:5584363-5584382 | None:intergenic | 35.0% | |
| ATATAGCAACTAGGTCTGTT+TGG | - | chr7.4:5584805-5584824 | MS.gene28832:intron | 35.0% | |
| CACTTGCACGATATCTTTAA+TGG | + | chr7.4:5584558-5584577 | None:intergenic | 35.0% | |
| CGTGTTCTTAAGGAGAAATT+TGG | - | chr7.4:5584527-5584546 | MS.gene28832:intron | 35.0% | |
| CTCAACCACAACTATGAAAA+TGG | - | chr7.4:5584496-5584515 | MS.gene28832:intron | 35.0% | |
| GATGTTGTATCCGTTGAAAA+CGG | - | chr7.4:5584428-5584447 | MS.gene28832:intron | 35.0% | |
| GTTGAAGGTAAACTGAATGA+TGG | + | chr7.4:5585258-5585277 | None:intergenic | 35.0% | |
| ! | ATGTTTGGTTTCACTTCTAG+AGG | - | chr7.4:5585053-5585072 | MS.gene28832:intron | 35.0% |
| ! | GATTCCCATTTTCATAGTTG+TGG | + | chr7.4:5584504-5584523 | None:intergenic | 35.0% |
| ! | TGTTTGGTTTCACTTCTAGA+GGG | - | chr7.4:5585054-5585073 | MS.gene28832:intron | 35.0% |
| !! | CAAGTTTTATCTGTTGAAGG+TGG | - | chr7.4:5585509-5585528 | MS.gene28832:CDS | 35.0% |
| !! | CCTCCGTAATTTTTAATTGC+CGG | + | chr7.4:5585482-5585501 | None:intergenic | 35.0% |
| !! | GTGCAAGTTTTATCTGTTGA+AGG | - | chr7.4:5585506-5585525 | MS.gene28832:CDS | 35.0% |
| !! | GTTTGATGATGATCAAGCAA+GGG | - | chr7.4:5584577-5584596 | MS.gene28832:intron | 35.0% |
| !! | TGTTTGATGATGATCAAGCA+AGG | - | chr7.4:5584576-5584595 | MS.gene28832:intron | 35.0% |
| AACTTAGGGCCAGTTTGAAT+TGG | + | chr7.4:5585032-5585051 | None:intergenic | 40.0% | |
| ACTGGCCCTAAGTTTATGTT+TGG | - | chr7.4:5585038-5585057 | MS.gene28832:intron | 40.0% | |
| CCGGCAATTAAAAATTACGG+AGG | - | chr7.4:5585479-5585498 | MS.gene28832:CDS | 40.0% | |
| GACTGTGTTGTGGAATATGT+TGG | - | chr7.4:5585533-5585552 | MS.gene28832:CDS | 40.0% | |
| GTCGTTTCTCTTAAGCTACA+AGG | - | chr7.4:5584452-5584471 | MS.gene28832:intron | 40.0% | |
| TCAGATACGCCAATTCAAAC+TGG | - | chr7.4:5585020-5585039 | MS.gene28832:intron | 40.0% | |
| TCATCTAGAGATACTGAGAC+CGG | - | chr7.4:5585460-5585479 | MS.gene28832:CDS | 40.0% | |
| TGATCAAGCAAGGGAAACAA+CGG | - | chr7.4:5584586-5584605 | MS.gene28832:intron | 40.0% | |
| TTCATAGTTGTGGTTGAGCT+AGG | + | chr7.4:5584494-5584513 | None:intergenic | 40.0% | |
| ! | AGCTTTAACACCTGATCCAA+TGG | + | chr7.4:5585567-5585586 | None:intergenic | 40.0% |
| ! | GGGGCCAAAAGTGATTTTAA+AGG | - | chr7.4:5585074-5585093 | MS.gene28832:intron | 40.0% |
| ! | GTTAGTTGATGTTTGGGTGT+GGG | - | chr7.4:5585418-5585437 | MS.gene28832:CDS | 40.0% |
| ! | GTTTGGTTTCACTTCTAGAG+GGG | - | chr7.4:5585055-5585074 | MS.gene28832:intron | 40.0% |
| ! | TGTTAGTTGATGTTTGGGTG+TGG | - | chr7.4:5585417-5585436 | MS.gene28832:CDS | 40.0% |
| !!! | TGTTTGGGTGTGGGTTTTTT+AGG | - | chr7.4:5585427-5585446 | MS.gene28832:CDS | 40.0% |
| AGGTGTTAAAGCTGCGATCA+AGG | - | chr7.4:5585574-5585593 | MS.gene28832:CDS | 45.0% | |
| AGTATAATCCCGGAGAAGAC+TGG | + | chr7.4:5584319-5584338 | None:intergenic | 45.0% | |
| GAGCTCATCAATTGGCGTTT+GGG | + | chr7.4:5585002-5585021 | None:intergenic | 45.0% | |
| GCGTATCTGAGCTCATCAAT+TGG | + | chr7.4:5585010-5585029 | None:intergenic | 45.0% | |
| GGGAATCGAACGTGTTCTTA+AGG | - | chr7.4:5584517-5584536 | MS.gene28832:intron | 45.0% | |
| TAACCAGAACCAGTCTTCTC+CGG | - | chr7.4:5584307-5584326 | MS.gene28832:CDS | 45.0% | |
| TATGTTGGACCTGAGTCCAT+TGG | - | chr7.4:5585548-5585567 | MS.gene28832:CDS | 45.0% | |
| TGAGCTCATCAATTGGCGTT+TGG | + | chr7.4:5585003-5585022 | None:intergenic | 45.0% | |
| ! | GATCTACGTTTGAAACGGTG+AGG | + | chr7.4:5584358-5584377 | None:intergenic | 45.0% |
| !! | AGAAACGACGCCGTTTTCAA+CGG | + | chr7.4:5584441-5584460 | None:intergenic | 45.0% |
| !! | AGAAGACTGGTTCTGGTTAG+CGG | + | chr7.4:5584306-5584325 | None:intergenic | 45.0% |
| !! | AGAGGATGAACGGATTACTG+TGG | + | chr7.4:5584282-5584301 | None:intergenic | 45.0% |
| !!! | TTGGGTGTGGGTTTTTTAGG+CGG | - | chr7.4:5585430-5585449 | MS.gene28832:CDS | 45.0% |
| AACCAGAACCAGTCTTCTCC+GGG | - | chr7.4:5584308-5584327 | MS.gene28832:CDS | 50.0% | |
| AACGGTGAGGTCGAATTTCG+TGG | + | chr7.4:5584345-5584364 | None:intergenic | 50.0% | |
| AGCAAGGGAAACAACGGTTG+AGG | - | chr7.4:5584592-5584611 | MS.gene28832:intron | 50.0% | |
| CTCCGTCAGAGATGAGGTAA+GGG | + | chr7.4:5584400-5584419 | None:intergenic | 50.0% | |
| GGTTAGCGGTAGAGGATGAA+CGG | + | chr7.4:5584292-5584311 | None:intergenic | 50.0% | |
| TGAAGGTGGTGACTGTGTTG+TGG | - | chr7.4:5585523-5585542 | MS.gene28832:CDS | 50.0% | |
| ! | ACACCTGATCCAATGGACTC+AGG | + | chr7.4:5585560-5585579 | None:intergenic | 50.0% |
| ! | TTCGTGGCGGAGTATAATCC+CGG | + | chr7.4:5584329-5584348 | None:intergenic | 50.0% |
| CCTCCGTCAGAGATGAGGTA+AGG | + | chr7.4:5584401-5584420 | None:intergenic | 55.0% | |
| CCTTACCTCATCTCTGACGG+AGG | - | chr7.4:5584398-5584417 | MS.gene28832:intron | 55.0% | |
| CGCCCTTACCTCATCTCTGA+CGG | - | chr7.4:5584395-5584414 | MS.gene28832:intron | 55.0% | |
| CGTTTCCTCCGTCAGAGATG+AGG | + | chr7.4:5584406-5584425 | None:intergenic | 55.0% | |
| GGACCTGAGTCCATTGGATC+AGG | - | chr7.4:5585554-5585573 | MS.gene28832:CDS | 55.0% | |
| GGTGAGGTCGAATTTCGTGG+CGG | + | chr7.4:5584342-5584361 | None:intergenic | 55.0% | |
| ! | ATCCCGGAGAAGACTGGTTC+TGG | + | chr7.4:5584313-5584332 | None:intergenic | 55.0% |
| !! | CTGGTTCTGGTTAGCGGTAG+AGG | + | chr7.4:5584300-5584319 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 5584146 | 5585637 | 5584146 | ID=MS.gene28832 |
| chr7.4 | mRNA | 5584146 | 5585637 | 5584146 | ID=MS.gene28832.t1;Parent=MS.gene28832 |
| chr7.4 | exon | 5585170 | 5585637 | 5585170 | ID=MS.gene28832.t1.exon1;Parent=MS.gene28832.t1 |
| chr7.4 | CDS | 5585170 | 5585637 | 5585170 | ID=cds.MS.gene28832.t1;Parent=MS.gene28832.t1 |
| chr7.4 | exon | 5584146 | 5584334 | 5584146 | ID=MS.gene28832.t1.exon2;Parent=MS.gene28832.t1 |
| chr7.4 | CDS | 5584146 | 5584334 | 5584146 | ID=cds.MS.gene28832.t1;Parent=MS.gene28832.t1 |
| Gene Sequence |
| Protein sequence |
