AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30239

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30239.t1 MTR_1g050492 98.108 740 14 0 1 740 1 740 0.0 1506
MS.gene30239.t1 MTR_1g032500 28.809 361 236 10 22 372 20 369 2.18e-36 142
MS.gene30239.t1 MTR_1g032500 28.809 361 236 10 22 372 20 369 7.42e-36 143
MS.gene30239.t1 MTR_2g006180 29.765 383 222 15 7 369 24 379 3.52e-34 139
MS.gene30239.t1 MTR_7g089260 88.235 34 4 0 707 740 1066 1099 1.29e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30239.t1 AT5G23880 77.224 742 164 3 1 740 1 739 0.0 1197
MS.gene30239.t1 AT1G61010 27.749 382 243 7 2 369 19 381 1.75e-37 150
MS.gene30239.t1 AT1G61010 27.749 382 243 7 2 369 19 381 1.75e-37 150
MS.gene30239.t1 AT1G61010 27.749 382 243 7 2 369 19 381 1.75e-37 150
MS.gene30239.t1 AT1G61010 27.749 382 243 7 2 369 19 381 1.75e-37 150
MS.gene30239.t1 AT1G61010 27.749 382 243 7 2 369 19 381 1.75e-37 150
MS.gene30239.t1 AT2G01730 27.019 359 241 8 22 370 20 367 1.23e-31 131
MS.gene30239.t1 AT2G01730 28.013 307 207 7 67 370 3 298 4.39e-28 119

Find 168 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATCTTAAAGAAGACTTTA+AGG 0.151256 6.2:-45249207 MS.gene30239:CDS
CATCAATAGTCTCTTCAATT+TGG 0.161163 6.2:+45243579 None:intergenic
CCCTCCTTCAACCCCTTTCC+AGG 0.179083 6.2:-45250319 MS.gene30239:intron
CTTTCGCTTCTCCCCGTTTC+CGG 0.206479 6.2:-45243253 MS.gene30239:CDS
CTCTGATTTATGTGCTTATA+AGG 0.207195 6.2:-45243552 MS.gene30239:intron
TCTCAGAATCATCATCTTTC+AGG 0.216936 6.2:-45249860 MS.gene30239:intron
ATATCAGAATGGGATGATTT+TGG 0.237943 6.2:-45246299 MS.gene30239:CDS
ATCAATAGTCTCTTCAATTT+GGG 0.246763 6.2:+45243580 None:intergenic
ACATACTGCTGGACATCTTT+TGG 0.258251 6.2:-45249740 MS.gene30239:CDS
CGTCAAAAGGACAAAGAATT+TGG 0.259609 6.2:-45249458 MS.gene30239:CDS
TCCAGATGATTATGTAATTA+AGG 0.261071 6.2:-45246264 MS.gene30239:CDS
TTCTGATATATTCTCATAAC+AGG 0.268705 6.2:+45246313 None:intergenic
CATTTGAACGGAACTGTTCT+AGG 0.271657 6.2:-45249548 MS.gene30239:CDS
AAAAGATCCATACCAGCTTT+AGG 0.290471 6.2:+45244708 None:intergenic
TAGGTAGGTGGTGATTTAAA+TGG 0.321579 6.2:-45245782 MS.gene30239:CDS
ACAGTGACTTTGACAGCTTT+TGG 0.321869 6.2:+45247085 None:intergenic
AAAGATCCATACCAGCTTTA+GGG 0.322007 6.2:+45244709 None:intergenic
TGACACTGCTGGACGGATAT+TGG 0.324027 6.2:-45249158 MS.gene30239:CDS
TCTAGCATCCATGGCTAGTT+TGG 0.326457 6.2:-45248235 MS.gene30239:CDS
TCTTGTTGGTGATTTGAAAT+TGG 0.334812 6.2:-45243206 MS.gene30239:CDS
TTTAAACAGGGAGCTGGTTC+TGG 0.335093 6.2:-45242420 MS.gene30239:intron
ATGTAACTGTTCGGAAGGTT+GGG 0.352264 6.2:-45242547 MS.gene30239:CDS
TATCTTAAAGAAGACTTTAA+GGG 0.357914 6.2:-45249206 MS.gene30239:CDS
CACATGATATATTTGTTGAA+TGG 0.362820 6.2:-45248200 MS.gene30239:CDS
GAGTAGTGTACTCTTCAAAA+AGG 0.364896 6.2:-45243422 MS.gene30239:intron
ACATGATATATTTGTTGAAT+GGG 0.367077 6.2:-45248199 MS.gene30239:CDS
TCCTTAATTACATAATCATC+TGG 0.370121 6.2:+45246263 None:intergenic
TACCGAGATGTATTTATTGA+TGG 0.370364 6.2:-45246374 MS.gene30239:CDS
CCACATAAATCTGTTCTTGT+TGG 0.373003 6.2:-45243220 MS.gene30239:CDS
CTGCAGGAATATCACACTTC+TGG 0.373439 6.2:-45248378 MS.gene30239:intron
CAGATGTTCATTGGTTTACA+TGG 0.373762 6.2:-45244789 MS.gene30239:CDS
GCACCGAGGTGAAGTGTATC+AGG 0.374774 6.2:+45250176 None:intergenic
AGAAAGTCCAAGGTGCTTAA+TGG 0.378539 6.2:+45250142 None:intergenic
ATGCTGTTGATTTCAATCAT+AGG 0.380186 6.2:-45249672 MS.gene30239:CDS
AAGCTTCTTCTTTCTTCATT+CGG 0.387369 6.2:+45247005 None:intergenic
ATGTTAGCCTTGTTACAGTT+TGG 0.392282 6.2:+45249885 None:intergenic
AACTGAGCCTGTATATAGAT+TGG 0.393815 6.2:-45250105 MS.gene30239:CDS
TCTCTCCACCAAGGGTGTTC+CGG 0.394987 6.2:-45243167 MS.gene30239:intron
AACTTACATTATTTGCTGTC+TGG 0.398833 6.2:+45246228 None:intergenic
GGATGAGGCGCTCCGGAAAC+GGG 0.399160 6.2:+45243241 None:intergenic
TGTGTCCAAGCGAGTTCCTT+TGG 0.407065 6.2:-45247065 MS.gene30239:CDS
GGTCCAAGTCAGATGTTCAT+TGG 0.410764 6.2:-45244798 MS.gene30239:CDS
CATTCAACCTTTGGACCATC+AGG 0.418043 6.2:+45248329 None:intergenic
AAAAGCAAGTCTTATGAAAG+AGG 0.418283 6.2:-45246981 MS.gene30239:CDS
TTGCCAGTATCAATGATCAT+TGG 0.424747 6.2:+45246914 None:intergenic
GATCCAATGATCATTGATAC+TGG 0.425609 6.2:-45246917 MS.gene30239:CDS
TATGTAACTGTTCGGAAGGT+TGG 0.431232 6.2:-45242548 MS.gene30239:CDS
TCTCATAACAGGGAAACATT+GGG 0.435796 6.2:+45246324 None:intergenic
CCAAGGTGCTTAATGGCATA+TGG 0.442567 6.2:+45250149 None:intergenic
ATCCGTCCAGCAGTGTCAAC+AGG 0.446345 6.2:+45249163 None:intergenic
TTCTCATAACAGGGAAACAT+TGG 0.452605 6.2:+45246323 None:intergenic
ACAGGCTCAGTTGAATAAAC+AGG 0.455744 6.2:+45250116 None:intergenic
TGGGAGAATATGAAATTGCT+TGG 0.456912 6.2:-45243312 MS.gene30239:CDS
ATTGGAACTTATTCTGATGC+TGG 0.457917 6.2:-45249140 MS.gene30239:CDS
AGAAGTCCCAATCTATATAC+AGG 0.459315 6.2:+45250098 None:intergenic
ACATATGCAAGAAAGTATAT+AGG 0.459730 6.2:+45248989 None:intergenic
TCAGGCAATGCTGCTTCAGA+TGG 0.460232 6.2:+45243630 None:intergenic
TGGATGAGGCGCTCCGGAAA+CGG 0.461065 6.2:+45243240 None:intergenic
GAGGATGTTGAAAGAATCAA+TGG 0.466075 6.2:+45250376 None:intergenic
TCCAAGCGAGTTCCTTTGGT+TGG 0.466424 6.2:-45247061 MS.gene30239:CDS
ACTGAGCCTGTATATAGATT+GGG 0.470505 6.2:-45250104 MS.gene30239:CDS
ATTTCAATCATAGGAAAGAA+AGG 0.472840 6.2:-45249663 MS.gene30239:intron
ACATCCTCATTGACTGTGGT+TGG 0.481329 6.2:-45250361 MS.gene30239:CDS
CCATATGCCATTAAGCACCT+TGG 0.482920 6.2:-45250149 MS.gene30239:CDS
ACTCAGCAAATTATTATTGA+AGG 0.483695 6.2:-45242396 MS.gene30239:CDS
TGTAGGTGGAATTTGCTGGC+GGG 0.484910 6.2:-45242589 MS.gene30239:intron
GCATCGGTTATTAGAACAGC+CGG 0.487786 6.2:+45249512 None:intergenic
CGTGAGGACAGACATTCTTC+AGG 0.489273 6.2:+45243612 None:intergenic
CGAACCTGGAAAGGGGTTGA+AGG 0.490438 6.2:+45250315 None:intergenic
GCTTGGGTTGATGCTGAAGC+AGG 0.491910 6.2:-45243295 MS.gene30239:CDS
ACTTATTCTGATGCTGGAAT+CGG 0.494101 6.2:-45249134 MS.gene30239:intron
TCCATGGCTAGTTTGGAAGC+TGG 0.494969 6.2:-45248228 MS.gene30239:CDS
TTACTACCTGTTGACACTGC+TGG 0.496285 6.2:-45249169 MS.gene30239:CDS
CCATGTTGCTCCCCTAAAGC+TGG 0.498843 6.2:-45244720 MS.gene30239:intron
TTTAACCAATCCTAGGAAAG+GGG 0.498857 6.2:-45249783 MS.gene30239:intron
TCAGCCTTACAGACGTCAAA+AGG 0.498981 6.2:-45249471 MS.gene30239:CDS
AGTAACGACGAACCTGGAAA+GGG 0.499715 6.2:+45250307 None:intergenic
TCACCTTTCTTGAGAGGAAG+TGG 0.505633 6.2:+45250063 None:intergenic
CGAAGAGCTAATTGCCTATG+AGG 0.506106 6.2:-45247038 MS.gene30239:CDS
CAGAATTACCGGAACACCCT+TGG 0.509505 6.2:+45243159 None:intergenic
ATTCAAAGCATTACAAGCAT+CGG 0.511444 6.2:+45249496 None:intergenic
GCCAACCAAAGGAACTCGCT+TGG 0.518369 6.2:+45247060 None:intergenic
TTGTTCAAAGGACTTCGCTA+TGG 0.520008 6.2:+45248913 None:intergenic
TGAAAACCCTCTCTCTTACA+TGG 0.521881 6.2:-45250402 MS.gene30239:CDS
GTGATTGCACCACATACTGC+TGG 0.522810 6.2:-45249751 MS.gene30239:CDS
ATAGGTTGTTCTAGCATCCA+TGG 0.523002 6.2:-45248244 MS.gene30239:intron
TTTCACGTAATCAATAGTGC+TGG 0.523750 6.2:+45248961 None:intergenic
TTATGAGAATATATCAGAAT+GGG 0.526656 6.2:-45246309 MS.gene30239:CDS
TTATAGTAATCTTCGCATAG+AGG 0.526807 6.2:+45242372 None:intergenic
GTTATGAGAATATATCAGAA+TGG 0.530769 6.2:-45246310 MS.gene30239:CDS
CAGCTTTAGGGGAGCAACAT+GGG 0.532123 6.2:+45244721 None:intergenic
ACGTGAAAAGTTTCCTTGAG+TGG 0.535300 6.2:-45248946 MS.gene30239:CDS
GAGTAACGACGAACCTGGAA+AGG 0.537415 6.2:+45250306 None:intergenic
ATATGGAAAATTACAAAGGA+TGG 0.538658 6.2:-45249709 MS.gene30239:CDS
GTGGAAGTAACACCACTTTG+TGG 0.539430 6.2:-45250434 MS.gene30239:CDS
GTAGGTGGAATTTGCTGGCG+GGG 0.543941 6.2:-45242588 MS.gene30239:intron
AATTACCGGAACACCCTTGG+TGG 0.550482 6.2:+45243162 None:intergenic
ACCAGCTTCCAAACTAGCCA+TGG 0.550717 6.2:+45248227 None:intergenic
CTGCTTTCCAAACTGTAACA+AGG 0.551071 6.2:-45249892 MS.gene30239:CDS
TTCAACATCCTCATTGACTG+TGG 0.551535 6.2:-45250365 MS.gene30239:CDS
TTTATGTGGATGAGGCGCTC+CGG 0.551907 6.2:+45243234 None:intergenic
CCAGCTTTAGGGGAGCAACA+TGG 0.552651 6.2:+45244720 None:intergenic
AAACCAATGAACATCTGACT+TGG 0.554970 6.2:+45244795 None:intergenic
CAATACATACCTTCTGGTGA+TGG 0.555335 6.2:+45246884 None:intergenic
TTAAAGAAGACTTTAAGGGC+AGG 0.556180 6.2:-45249202 MS.gene30239:CDS
GAAGAATTTAAAGCATCTCA+AGG 0.558660 6.2:-45246959 MS.gene30239:CDS
GAAAATTACAAAGGATGGTG+AGG 0.559500 6.2:-45249704 MS.gene30239:CDS
CATGATATATTTGTTGAATG+GGG 0.560049 6.2:-45248198 MS.gene30239:CDS
TGTAACTGTTCGGAAGGTTG+GGG 0.561028 6.2:-45242546 MS.gene30239:CDS
TGACCACTTCCTCTCAAGAA+AGG 0.561523 6.2:-45250066 MS.gene30239:intron
AAGCAGTTTCTCTCCACCAA+GGG 0.562590 6.2:-45243175 MS.gene30239:CDS
GGGAGAATATGAAATTGCTT+GGG 0.563225 6.2:-45243311 MS.gene30239:CDS
ATCCATCAATAAATACATCT+CGG 0.567000 6.2:+45246372 None:intergenic
ACCTGGAAAGGGGTTGAAGG+AGG 0.567236 6.2:+45250318 None:intergenic
ATTGGGGCAACACTAGATGA+AGG 0.567377 6.2:+45246341 None:intergenic
CAAAAGTTATATCTGATGAA+AGG 0.568180 6.2:-45245712 MS.gene30239:CDS
GACCTCGACAATGCTCCTGA+TGG 0.570010 6.2:-45248344 MS.gene30239:CDS
AGAACAGATTTATGTGGATG+AGG 0.571503 6.2:+45243226 None:intergenic
CAAAAGGACAAAGAATTTGG+AGG 0.574122 6.2:-45249455 MS.gene30239:intron
GCTGGCGGGGCTTTGCGTTG+TGG 0.576450 6.2:-45242575 MS.gene30239:CDS
TTTAACTCACCTTTCTTGAG+AGG 0.583817 6.2:+45250057 None:intergenic
CCTGGAAAGGGGTTGAAGGA+GGG 0.584424 6.2:+45250319 None:intergenic
AAGAATTTAAAGCATCTCAA+GGG 0.585980 6.2:-45246958 MS.gene30239:CDS
GAAAGGGGTTGAAGGAGGGA+AGG 0.587995 6.2:+45250323 None:intergenic
CCAACAAGAACAGATTTATG+TGG 0.588336 6.2:+45243220 None:intergenic
TCAATAGTCTCTTCAATTTG+GGG 0.589755 6.2:+45243581 None:intergenic
CAATGCTCCTGATGGTCCAA+AGG 0.590968 6.2:-45248336 MS.gene30239:intron
GACCATCAGGAGCATTGTCG+AGG 0.591660 6.2:+45248342 None:intergenic
TGGAATCACTCATCCACTCA+AGG 0.592275 6.2:+45248933 None:intergenic
AAACAGGAGCAGAAAGTCCA+AGG 0.594350 6.2:+45250132 None:intergenic
AAAAGATGTCCAGCAGTATG+TGG 0.596134 6.2:+45249742 None:intergenic
TATCACACTTCTGGTTAGCA+AGG 0.599346 6.2:-45248369 MS.gene30239:CDS
GTGGTGAATATGTAACTGTT+CGG 0.599437 6.2:-45242556 MS.gene30239:CDS
ATGATATATTTGTTGAATGG+GGG 0.601146 6.2:-45248197 MS.gene30239:CDS
CGTTCCAACCACAGTCAATG+AGG 0.602234 6.2:+45250357 None:intergenic
AAGATCCATACCAGCTTTAG+GGG 0.603805 6.2:+45244710 None:intergenic
TCATTGTATACTCCACAAAG+TGG 0.604455 6.2:+45250422 None:intergenic
GAGGCAAATGGGAACATCTG+TGG 0.608734 6.2:-45250453 None:intergenic
ATGGAAACCATGTAAGAGAG+AGG 0.609295 6.2:+45250395 None:intergenic
AAGAAGACTTTAAGGGCAGG+TGG 0.609737 6.2:-45249199 MS.gene30239:CDS
TTGTAGGTGGAATTTGCTGG+CGG 0.609773 6.2:-45242590 MS.gene30239:intron
GGTTGGGGATGCAACTCAGA+AGG 0.617332 6.2:-45242531 MS.gene30239:intron
ATTAGCTCTTCGCCAACCAA+AGG 0.620173 6.2:+45247049 None:intergenic
GATGAGGCGCTCCGGAAACG+GGG 0.621124 6.2:+45243242 None:intergenic
TGGGGCAACACTAGATGAAG+GGG 0.621813 6.2:+45246343 None:intergenic
TTTCTGCTTGCAGTATTGGG+CGG 0.622415 6.2:-45249029 MS.gene30239:intron
TGGAAACCATGTAAGAGAGA+GGG 0.624028 6.2:+45250396 None:intergenic
TACCTGTTGACACTGCTGGA+CGG 0.625845 6.2:-45249165 MS.gene30239:CDS
AAAGGGGTTGAAGGAGGGAA+GGG 0.626232 6.2:+45250324 None:intergenic
CTTGGGTTGATGCTGAAGCA+GGG 0.629218 6.2:-45243294 MS.gene30239:CDS
TACGATATGGAAAATTACAA+AGG 0.631821 6.2:-45249713 MS.gene30239:CDS
AATAATCAACCATCACCAGA+AGG 0.637151 6.2:-45246893 MS.gene30239:intron
CATCGGTTATTAGAACAGCC+GGG 0.637486 6.2:+45249513 None:intergenic
CTCATAACAGGGAAACATTG+GGG 0.637816 6.2:+45246325 None:intergenic
CTTATAAGCACATAAATCAG+AGG 0.637999 6.2:+45243553 None:intergenic
TAAGCAGTTTCTCTCCACCA+AGG 0.640963 6.2:-45243176 MS.gene30239:CDS
TTAACCAATCCTAGGAAAGG+GGG 0.641700 6.2:-45249782 MS.gene30239:intron
TTGGGGCAACACTAGATGAA+GGG 0.641752 6.2:+45246342 None:intergenic
TGTAATTAAGGAAGAAGACG+TGG 0.645246 6.2:-45246252 MS.gene30239:CDS
ATTTGGGGAGCGTAAACGTG+AGG 0.646771 6.2:+45243596 None:intergenic
AGAATTTAAAGCATCTCAAG+GGG 0.660819 6.2:-45246957 MS.gene30239:CDS
TGAATATGTAACTGTTCGGA+AGG 0.671991 6.2:-45242552 MS.gene30239:CDS
GTAACGACGAACCTGGAAAG+GGG 0.682343 6.2:+45250308 None:intergenic
TCTGATATATTCTCATAACA+GGG 0.694888 6.2:+45246314 None:intergenic
GGGGCAACACTAGATGAAGG+GGG 0.696699 6.2:+45246344 None:intergenic
CATCCTGATACACTTCACCT+CGG 0.727465 6.2:-45250179 MS.gene30239:CDS
GGGCAACACTAGATGAAGGG+GGG 0.732882 6.2:+45246345 None:intergenic
TGGCATATGGTAAAGCACCG+AGG 0.792692 6.2:+45250162 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.2 gene 45242332 45250468 45242332 ID=MS.gene30239
chr6.2 mRNA 45242332 45250468 45242332 ID=MS.gene30239.t1;Parent=MS.gene30239
chr6.2 exon 45250320 45250468 45250320 ID=MS.gene30239.t1.exon1;Parent=MS.gene30239.t1
chr6.2 CDS 45250320 45250468 45250320 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45250067 45250235 45250067 ID=MS.gene30239.t1.exon2;Parent=MS.gene30239.t1
chr6.2 CDS 45250067 45250235 45250067 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45249861 45249957 45249861 ID=MS.gene30239.t1.exon3;Parent=MS.gene30239.t1
chr6.2 CDS 45249861 45249957 45249861 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45249664 45249790 45249664 ID=MS.gene30239.t1.exon4;Parent=MS.gene30239.t1
chr6.2 CDS 45249664 45249790 45249664 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45249456 45249571 45249456 ID=MS.gene30239.t1.exon5;Parent=MS.gene30239.t1
chr6.2 CDS 45249456 45249571 45249456 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45249135 45249229 45249135 ID=MS.gene30239.t1.exon6;Parent=MS.gene30239.t1
chr6.2 CDS 45249135 45249229 45249135 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45248887 45249038 45248887 ID=MS.gene30239.t1.exon7;Parent=MS.gene30239.t1
chr6.2 CDS 45248887 45249038 45248887 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45248337 45248394 45248337 ID=MS.gene30239.t1.exon8;Parent=MS.gene30239.t1
chr6.2 CDS 45248337 45248394 45248337 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45248155 45248262 45248155 ID=MS.gene30239.t1.exon9;Parent=MS.gene30239.t1
chr6.2 CDS 45248155 45248262 45248155 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45246894 45247146 45246894 ID=MS.gene30239.t1.exon10;Parent=MS.gene30239.t1
chr6.2 CDS 45246894 45247146 45246894 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45246235 45246419 45246235 ID=MS.gene30239.t1.exon11;Parent=MS.gene30239.t1
chr6.2 CDS 45246235 45246419 45246235 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45245709 45245801 45245709 ID=MS.gene30239.t1.exon12;Parent=MS.gene30239.t1
chr6.2 CDS 45245709 45245801 45245709 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45244721 45244819 45244721 ID=MS.gene30239.t1.exon13;Parent=MS.gene30239.t1
chr6.2 CDS 45244721 45244819 45244721 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45243553 45243684 45243553 ID=MS.gene30239.t1.exon14;Parent=MS.gene30239.t1
chr6.2 CDS 45243553 45243684 45243553 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45243423 45243467 45243423 ID=MS.gene30239.t1.exon15;Parent=MS.gene30239.t1
chr6.2 CDS 45243423 45243467 45243423 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45243168 45243335 45243168 ID=MS.gene30239.t1.exon16;Parent=MS.gene30239.t1
chr6.2 CDS 45243168 45243335 45243168 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45242532 45242606 45242532 ID=MS.gene30239.t1.exon17;Parent=MS.gene30239.t1
chr6.2 CDS 45242532 45242606 45242532 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
chr6.2 exon 45242332 45242433 45242332 ID=MS.gene30239.t1.exon18;Parent=MS.gene30239.t1
chr6.2 CDS 45242332 45242433 45242332 ID=cds.MS.gene30239.t1;Parent=MS.gene30239.t1
Gene Sequence

>MS.gene30239

ATGGGAACATCTGTGGAAGTAACACCACTTTGTGGAGTATACAATGAAAACCCTCTCTCTTACATGGTTTCCATTGATTCTTTCAACATCCTCATTGACTGTGGTTGGAACGATCACTTCGACCCTTCCCTCCTTCAACCCCTTTCCAGGTTCGTCGTTACTCATAACGAACGCTTTGTGGCTTTATTCCCTTTGATTTCTTATTTAGCTTGTGTGACTGATATGTAATGTAGGGTAGCATCAACTATTGATGCTGTTTTACTTTCACATCCTGATACACTTCACCTCGGTGCTTTACCATATGCCATTAAGCACCTTGGACTTTCTGCTCCTGTTTATTCAACTGAGCCTGTATATAGATTGGGACTTCTCACTATGTATGACCACTTCCTCTCAAGAAAGGTGAGTTAAAAAATGTACATGTCATTTTGCAAAATGGTTTGGTTGAGACTTGAGACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCTTTTGCAGCAAGTGTCGGAGTTTGATCTGTTCACTCTAGATGATATTGATTCTGCTTTCCAAACTGTAACAAGGCTAACATACTCTCAGAATCATCATCTTTCAGGTAGGCATTTCATTTCAATGTCATATATCTAAACAGTTTCCTCAATTTATGACATTTTAACCAATCCTAGGAAAGGGGGAGGGAATCGTGATTGCACCACATACTGCTGGACATCTTTTGGGAGGTACGATATGGAAAATTACAAAGGATGGTGAGGATGTCATATATGCTGTTGATTTCAATCATAGGAAAGAAAGGTAAATTATTTATTTTTTTATTTCTCCAAAAATTTTCTTGTGTATTCTTAACGACCAGAAAGGAAGCTACTTATCAATCTAATTTTCACTAGGCATTTGAACGGAACTGTTCTAGGTTCTTTTGTTCGCCCGGCTGTTCTAATAACCGATGCTTGTAATGCTTTGAATAATCAGCCTTACAGACGTCAAAAGGACAAAGAATTTGGAGGTAACTAACATTTAAATCTTATAATTGCTACTCTTTGACAGAAATAAGGTGAATTTTTCATTTTTTGTTTTCTTGAGTTGCTATCAAGAGAAAACTGAAATATTTTTATGCCTTGGATATTCAAAGACGAGGCATGCAAGCATTAAAAAGTCTTCATCGCGAAATAAGAAAACTGTCTAGACTATGTACTTTATTTTTCTGATCATATATCTTGTTGGTTATTTAGATATCTTAAAGAAGACTTTAAGGGCAGGTGGCAATGTGTTACTACCTGTTGACACTGCTGGACGGATATTGGAACTTATTCTGATGCTGGAATCGGTCAGTACAAGAAAAGAATTACGCTTTTATTCTATCTTTCTTAGTTTATTCCTGAATGTACACGCGTGAGTTGACATCAGATCTTTCTGCTTGCAGTATTGGGCGGATGAAAACTTGAACTATCCTATATACTTTCTTGCATATGTTGCATCCAGCACTATTGATTACGTGAAAAGTTTCCTTGAGTGGATGAGTGATTCCATAGCGAAGTCCTTTGAACAAACTCGTGAAAATATATTTCTTCTGAAGTAAGTTGCATCTTCCTTGATTTATATTGGGAGCAAGATATTTATATGTCAATTGAATTTTTGTTCTTGGGGATGCTACGATGCCTTTTTATTGTTTAAAATTTCAAACCTAAAAGTAATGATTTTCTTGTGATATTTTAAAATAGAAGATTTTGTTCAGTCATGGGTGAAAGATGAGTTTTAATAACCTACAGGTTGTCACACACACTTTGAGGATCTTTCCTATATATGTATTAAACAAATATTTAAGAGAGAGGGAGATATGAACTTTCAGTGTAAACTAGTTTTACACCGATTTCCAAGAAGAATCCAGTTTTTAAAATGTTGTTGAAAAATCGGTTTATGTGGCAATATGATGAATTGTCTTTGGATGTTGGTGTAGAACTAATTTACACCGGCAATGCACCTCCATTAGCTCAAAAGTTAATCTCCTTTTATTTTAGTTTCTGCATTTATCTTGTGTTTAAAATAGACTGTAATGCCTATCTGCAGGAATATCACACTTCTGGTTAGCAAGGCTGACCTCGACAATGCTCCTGATGGTCCAAAGGTTGAATGATTTTTTATGCTAATACTTTATCAGGCCTGCTTCCTTACTGATTCTGATACACATATCTTGTATAGGTTGTTCTAGCATCCATGGCTAGTTTGGAAGCTGGTTTTTCACATGATATATTTGTTGAATGGGGGAACGATGTCAAAAATCTTGTGCTTTTTACTGAAAGAGGCCAGGTATACTCTTCAGAATGAAAACATTTCTGATGTATTGTGTTTTAGTATTCTTGTGATAGAACTTCATTGGAAAACTCCTACTCTTGTTCAAGGGAACCTAAAGGAAAGTGAAGCAAGAGTGCTTGAGAGTAGAGACTAGGCAACTCAATAAACAACTAACTCCCTACATTCGTCCCCAATGTGTGGCTCAAGTGGTTGAGCTGGAACAACTGAAAGAGTTTGAGAAGCAGTTCTAGAGTTCAAACTCTGGCTACTTAAAACCCATTTGGTGTTGGCTTGGGACCTTGGAGTGTGCTCCTCTCAAGGTTTCACATTCGATTCCCCATGGTGCCAATTTTAGTGGGCTAAGTCCATATAGAGCTATGCTCTGGCTTTAAATGGGGCACCCCCCGCAAGTGGACGGTGGGATTTGATCCCTCGGGTTAGTCGGTCCTTAGGTTGGATACCGAGTTTGCGAAAAGAAAAAAAAAACTCTGGCTACTAACATAACATACTAACAATTCCCAATAATTCTCTTATCTAAATCAAACGAACAATCTTTTCGACGACGCACGTGCGCAAAGCCTTCTTATTTCCCATAATTTTCCTCTTTACTGTCTATGTTTTGAATTTTAGCACATTTTATCTCTTTTATCCCATTAGCCTTTATTAATATTTCATATTATTTTTTATTAGAAAATGCTTTATATTTTGCTAATAGTGTTTGAGAGTTTGTTTTACGTCTTTTGGGCAGTGAGAATGGAATAAGGATCTTGGGTCATGCAACTTATTTTTATTTGTGATGTATTTTTTTTAAAAGATTAATTTTGATACACTATCTAGTATACACAAATCATCCTTTTTATCATTTTTAAGGTAGATATGATTAAAGTTAATTTTTTTTGGTGATCCAACGAGTATGATTGATCGACAGTGTAATACATTATTCATTTCAATTAAATTATTTCTTTAATACTATGTATTTGTTAATCTTATGTTTCAATTGATCCTTATGTGTACAATGCATAGTTTGGCACGCTAGCTCGTATGCTTCAAGCTGATCCACCTCCAAAAGCTGTCAAAGTCACTGTGTCCAAGCGAGTTCCTTTGGTTGGCGAAGAGCTAATTGCCTATGAGGAAGAGCAAAACCGAATGAAGAAAGAAGAAGCTTTAAAAGCAAGTCTTATGAAAGAGGAAGAATTTAAAGCATCTCAAGGGGCTGATAATAATACTATCGATCCAATGATCATTGATACTGGCAATAATCAACCATCACCAGAAGGTATGTATTGTATTAATTATTTTGGAGCTAATATTTAGAAGTGTTTCCCTTTTATTTGTTTTCCTTTCACTACAAATCATGACAACTTTGGTGTTGTTTTCATGTTAAATGCATTCACTTAGGTATTTAAAATTATCCACTTGTGTTTCCTCATATCATAATCATTTTCTTTTCTGTTTTATTTAACTATGCTATTTTGGGTCATGTTTACTTGAATTTTTTCTACTATTATTAGCTGAATCTATTTATCTTTAACCAGTTTTGAATCTTGGGAAGTGCTACACACTCTGAGCGCTAAAACAAAAGAATAAATAAATTCATCTATTCCCTTCTGTTACAAAACAAAACAAAACAAAACAACCACTGAAATATATTAAATAAGCTACTTTAATATTCATATAACATAAATCAAATTTGAAATGAACCTACTGATGTTTCTTTCAACCCCTTAAGTAGTTTAATTTGCACTTGCAGCGGCTGTTCCTAAAAACGGAGGATACCGAGATGTATTTATTGATGGATTTGTCCCCCCTTCATCTAGTGTTGCCCCAATGTTTCCCTGTTATGAGAATATATCAGAATGGGATGATTTTGGTGAAGTCATAAATCCAGATGATTATGTAATTAAGGAAGAAGACGTGGACCAGACAGCAAATAATGTAAGTTTCCTTTTTAAAATACAGCCTTGTGACTTCTCAGTTTCAATTGAAATATCTATTCCAGTTCAAAATGACATTAGTGTTCATATCATGTTTCTGTTCTGAGTTACTAGTCTATTGTAGAACACATTATAAAAGAAAAGCTTATAAAGGTTAATATAATTTACATTGATAAAGGTTAATGATATCATTGGATTGAAAAGGAGTTGGAAACCTTATAAATGATAAGATTTGATACATTCGGCTTATGGAAAAGCTAGTCTTTACATGACTTAAATATGGAATGCGAGACATTCGTCTTCTATCCATGAAAAATATTTGCTGTGATCCAAGTTTTCTTATTGGTGATTAAAAATGTTTGCTGGTATTTGCACTCCAACCCTATATTATGAATAATAATACTTGTTTATCATTTTCCTATTTTTTATATTAGGTAGGTGGTGATTTAAATGGAAAACTAGATGAAAGTGCTGCAAGTTTGATATTTGATACAAAGCCATCAAAAGTTATATCTGATGAAAGGACTGTAAGCTTCACTCACTATCTTTTTCTTAAATCTTTATGTTTCCTGTTCTTATGATTAGTAATTTTATGCAATTGTGTTTGAATTTATTACTGCTATATTCATATATTGATTGGATGAATGAAGTTGAATCACCTTTTCCCTTTTTGGCTTTGTCACCAAATTTATTACTTTTGCAAATATTAAAAGTCTCCTCTAACCTATCTTTGATATTTTACAAAAGATGCTATTATGTTTGTTTTTTCTAACATTTGTATTAGTCCTGCAAAGGATTTTTTTTTTCCCAAACCATTTATTTGCTCCTTAGTTAGATTATAGTCTCCAATGGAAGTTTATCTTTACAGGCATTTTTATCTTATTTTATCCCTTAAATTCTATTAGGCGGAACATCGATGCAATAGGTTACAGAGTTGAAACCATATTCATGATTTATTAAAATTCTAAGCAATGTGGTGTGCATTAGGGTTGAGTTCGACCAATCCAAATTCTAAGATGGTATTAATGTTTATCCTAAATCCACTGGGCCACCCACTGTCGGACTACTCGGGTCACACTCTGGATGTCCAGTCATGGGTGTGAGGGGGTGTTTAGATTCCCACACTAGAGAGATATGACCTTATAATGTGTTTATAAGTGGGAGACATCCCTCACCTTGTAAGCCAGGTTTGTAGGGTTGAGTTAGGTTCACCCAGATTCTAAGATACATTTAAATTTCAGACTGCAAATCACATTAGACCAGAAATATTATGATGGGGCAAGGAAGCTTGTTTTGATTGTGGATTTACACTTGCATTTCTTGTATTTGTATAACTTTAGCATTTATTAATCTACTTGTATGAATCTTAAATGCGCCAAATCTACTTATGATGGTGTTGATTTTGTTGTTGTCTAGGTCCAAGTCAGATGTTCATTGGTTTACATGGATTTTGAAGGTCGTTCAGATGGAAGATCAATTAAGAACATTCTCTCCCATGTTGCTCCCCTAAAGCTGGTATGGATCTTTTTGGTCTTTTGCAATTCAATCAACAAGGGCACATCATAAATCTTCTATAACGTACTTGTATTTGGGGGATAGATCAGAACTCATAGGTTGCCATATCTTTCCACCATTAAAAACCATATGATATTTGAAAATAATTTATTTTAATTTTTAGTTGATGTGAAAAAGTGTTGTCAACCGCGGATTACGGAAAATAGTGCTCTGTTAAAATTCCTCCTCTACCCTATAGTGCTATTAGTGCTACTATAGCCACTGTTTGTCAACACTTTGTACTAAATCGCATATCCCAGAACAATAGCAGTTTGTTAAAATTCACTACCCAATAGCCACTATTTGACAACACTGATACAATATTTTAAGCAAAGAATACTGTGACCTTCTGGCTGCAATTTTCAGTAGGGCAACGAATTAGGATTTTAGCTAACTAGGGTTATAACTTATTATTTATAAAGGCACTGGAATTTGAAAATATGTAAAATCTAAGATGCCTACTTAACGTATTAAGTTCTTTTGAAATGCACACTATTGATAACTATGGCTGTGTGTTGTCAAAAGCTTAAGCCGTGACAATTTTGCTAACTATTGAAATTGATAGCTATCAAATGAATACTAATGATAAATATGCACATTTTGTTTGATTTTTTTTTTTCTTTGTTTGTTTATGTGTTGTGTTGCATTTTTCCTTCACACCTTATTACTTTAATGTTTGTATTTCTCTAATTTATCTGTTTACATATATAATGTGTTCTATTCTTATCTATGACGTCTATTATATATTCTATTTTATGTTCACATTCCTATTAATTGTGTACTAGTCTTTAATTTTGAGAAATATTTTTATTTTGTCATTTATAAAATGTTTTGTACAAATAATTTATATTCTTCGGCACAGCAGCCATCTTGCTATTGCAATTTTGGAATTGGCAACTCCACTCTAAGCAATCTATTTGTCATGTTTATCATTGTATCATTTGCTTTTGTTATTTTTATACCATGCATGATGATGAATCTCACTATTATCCTGAAGGTTTTGGTGCATGGATCGGCTGAAGCTACAGACCATCTGAAGCAGCATTGCCTGAAGAATGTCTGTCCTCACGTTTACGCTCCCCAAATTGAAGAGACTATTGATGTTACCTCTGATTTATGTGCTTATAAGGTGCAATGACATCAAATTTTGTACATTTGCCGAAAAAACTGTACAACATGTCAAAATTAATCATGTTATGCTTTTCTGGTTATAGGTTCAATTATCTGAGAAGTTAATGAGTAGTGTACTCTTCAAAAAGGTATATAATATATGTCTGAACTGATTAATTTTATACAAATCGTCTGCCAGTTATTGTCTTGAATAATAGACATAAATTCAATTGCAGCTGGGAGAATATGAAATTGCTTGGGTTGATGCTGAAGCAGGGAAGACAGAAAATGACATGCTTTCGCTTCTCCCCGTTTCCGGAGCGCCTCATCCACATAAATCTGTTCTTGTTGGTGATTTGAAATTGGCAGATTTTAAGCAGTTTCTCTCCACCAAGGGTGTTCCGGTAATTCTGCATTTATAGATCCAGTACCAGTTTACTAATTCCTTCTTGCACTGATTTTTTATTGGTAAATGGAGTGATTTCCTTTTCATTTCCGTAGCATTGAAAATGCGGATTACCATGTGTTCTGAAACTGAAACTTGACTCAATTAAATCTGAACATTTTCTACTTTATAAAAAATGCTTCATTACAGTTTTGGTCCCCTTATTTTTACTCATCCACGGAATTGATCCCCCCCCAATTTAAAATCATGCGGTTTTGGTCCCTTTTTCATATTTTTCAACTCAGAATTGTTGATGTGACATGTTTTAAATGATGTGTCATTCGACCTGATGATGTCAAATTATCACCAACAATGAAATTACCAGAAAACCCCCTTAAAACTCCAATTTCAATATCACCATTTTTTATTTCAAAAAATCGGAAAAAGGACCAAAACTGTGATTTTAAAATGGGGGGACCAATTTCTTGCGAGTAAAAATATGGGGGCCAAAAAAATATGGGGATCAAAATTGTAATCAAGCCTATAAAAAAATTGTGTCATAACATGATAACTTTTGTAGGTGGAATTTGCTGGCGGGGCTTTGCGTTGTGGTGAATATGTAACTGTTCGGAAGGTTGGGGATGCAACTCAGAAGGTAAATGCTTCTTCTGAACATTTGTTAAATTTTATATTTTCTTAGGAAAATGACTTTTCTGATAAAGATTCTGATTCATTATCATATTTTTTAAACAGGGAGCTGGTTCTGGTACTCAGCAAATTATTATTGAAGGTCCTCTATGCGAAGATTACTATAAAATTCGAGATTATCTCTATTCGCAGTTTTACTTGCTTTAG
Protein sequence

>MS.gene30239.t1

MGTSVEVTPLCGVYNENPLSYMVSIDSFNILIDCGWNDHFDPSLLQPLSRVASTIDAVLLSHPDTLHLGALPYAIKHLGLSAPVYSTEPVYRLGLLTMYDHFLSRKQVSEFDLFTLDDIDSAFQTVTRLTYSQNHHLSGKGEGIVIAPHTAGHLLGGTIWKITKDGEDVIYAVDFNHRKERHLNGTVLGSFVRPAVLITDACNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAGRILELILMLESYWADENLNYPIYFLAYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIFLLKNITLLVSKADLDNAPDGPKVVLASMASLEAGFSHDIFVEWGNDVKNLVLFTERGQFGTLARMLQADPPPKAVKVTVSKRVPLVGEELIAYEEEQNRMKKEEALKASLMKEEEFKASQGADNNTIDPMIIDTGNNQPSPEAAVPKNGGYRDVFIDGFVPPSSSVAPMFPCYENISEWDDFGEVINPDDYVIKEEDVDQTANNVGGDLNGKLDESAASLIFDTKPSKVISDERTVQVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATDHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSSVLFKKLGEYEIAWVDAEAGKTENDMLSLLPVSGAPHPHKSVLVGDLKLADFKQFLSTKGVPVEFAGGALRCGEYVTVRKVGDATQKGAGSGTQQIIIEGPLCEDYYKIRDYLYSQFYLL